BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023631
(279 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|224125072|ref|XP_002329885.1| predicted protein [Populus trichocarpa]
gi|222871122|gb|EEF08253.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 471 bits (1212), Expect = e-130, Method: Compositional matrix adjust.
Identities = 219/279 (78%), Positives = 252/279 (90%)
Query: 1 MSVSLNANLYQPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKP 60
M+ SLNANL QPSLSC KL+SGLK+Q PS++ TG+PNL+AEFYG+V+KSL G RN KP
Sbjct: 1 MASSLNANLSQPSLSCGAKLYSGLKLQFPSLYATGRPNLTAEFYGKVNKSLQCGTRNHKP 60
Query: 61 IRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
R + MMPIGTP+V YRTPGEG+WQWVD+WNALYRER++FIGQNIDEEFSNQILATMLY
Sbjct: 61 TRAAVKMMPIGTPRVPYRTPGEGTWQWVDIWNALYRERILFIGQNIDEEFSNQILATMLY 120
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LD++DDSKR+Y+YINGPGGD+TP+LAIYDTMQSLKSPVGTHCVGFAY+LAGFLL GEKG
Sbjct: 121 LDTIDDSKRMYLYINGPGGDLTPSLAIYDTMQSLKSPVGTHCVGFAYNLAGFLLTAGEKG 180
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLS 240
NRSAMPLSRIAL SPAGAARGQADDI NEA+ELLR+RDY++ ELS+KTGQPFEKI+KDLS
Sbjct: 181 NRSAMPLSRIALQSPAGAARGQADDICNEANELLRIRDYLYNELSKKTGQPFEKISKDLS 240
Query: 241 RIKRFGSQEALEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
R+KRF +Q+ALEYGLIDRIIRPPRI +D+ DA GLG
Sbjct: 241 RMKRFEAQDALEYGLIDRIIRPPRIDDDVGPSDASAGLG 279
>gi|255537123|ref|XP_002509628.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
gi|223549527|gb|EEF51015.1| ATP-dependent Clp protease proteolytic subunit, putative [Ricinus
communis]
Length = 279
Score = 459 bits (1182), Expect = e-127, Method: Compositional matrix adjust.
Identities = 214/279 (76%), Positives = 245/279 (87%)
Query: 1 MSVSLNANLYQPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKP 60
M+ LN NL QPSLSC KL+SGLK+QSPS++ TG+PNL+AEFYGRV+KSL G R+
Sbjct: 1 MAFCLNTNLNQPSLSCGTKLYSGLKLQSPSLYATGRPNLTAEFYGRVNKSLQCGTRSHSA 60
Query: 61 IRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
I + MMPIGTP+V YRTPGEG+WQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY
Sbjct: 61 IHAGVRMMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LD++DD+KR+Y YINGPGGD+TPTLAIYDTMQSLKSPVGTHCVGFAY+LAGF+LA GEKG
Sbjct: 121 LDTIDDNKRIYFYINGPGGDLTPTLAIYDTMQSLKSPVGTHCVGFAYNLAGFILAAGEKG 180
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLS 240
NRSAMPLSRIAL SPAGAARGQADDIRNEA+ELLR++DY++ EL++KTGQP EKI KDLS
Sbjct: 181 NRSAMPLSRIALQSPAGAARGQADDIRNEANELLRIKDYLYNELAKKTGQPAEKINKDLS 240
Query: 241 RIKRFGSQEALEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
R+KRF +QEAL+YGLIDRIIRPP + D +D GLG
Sbjct: 241 RMKRFNAQEALDYGLIDRIIRPPAVDADSAPRDPSAGLG 279
>gi|225470285|ref|XP_002266380.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic [Vitis vinifera]
gi|147794105|emb|CAN62361.1| hypothetical protein VITISV_031921 [Vitis vinifera]
gi|297742668|emb|CBI34817.3| unnamed protein product [Vitis vinifera]
Length = 291
Score = 447 bits (1150), Expect = e-123, Method: Compositional matrix adjust.
Identities = 207/269 (76%), Positives = 237/269 (88%)
Query: 11 QPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPI 70
QP LSC KLFSGLK+QS S FGTGKPNL+ EF+ +VHKS+ S + K R R+ MMPI
Sbjct: 23 QPPLSCATKLFSGLKLQSASTFGTGKPNLTVEFFNKVHKSVQSRTSDSKSTRARVRMMPI 82
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
GTP+V YRTPGEG+WQWVDLWNALYRERVI+IGQ+IDEEFSNQ+LATMLYLDS++ SKR+
Sbjct: 83 GTPRVPYRTPGEGTWQWVDLWNALYRERVIYIGQHIDEEFSNQLLATMLYLDSIESSKRM 142
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+ YIN PGGD+TP+LAIYDTMQSLKSPVGT+C+GFAY+LA FLLA GEKGNR AMPLSRI
Sbjct: 143 FFYINSPGGDLTPSLAIYDTMQSLKSPVGTNCLGFAYNLATFLLAAGEKGNRLAMPLSRI 202
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
AL SPAGAARGQADDIRNEA+ELLR+RDY+F EL+ KTGQP +KI KDL R+KRF +QEA
Sbjct: 203 ALQSPAGAARGQADDIRNEANELLRIRDYLFSELANKTGQPIDKINKDLRRMKRFNAQEA 262
Query: 251 LEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
LEYGLIDRI+RPPR+K D PRKDAGTGLG
Sbjct: 263 LEYGLIDRILRPPRVKADAPRKDAGTGLG 291
>gi|356563278|ref|XP_003549891.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Glycine max]
Length = 285
Score = 444 bits (1141), Expect = e-122, Method: Compositional matrix adjust.
Identities = 204/268 (76%), Positives = 235/268 (87%)
Query: 12 PSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIG 71
P+ S KL+SGLK+Q+ S F +PN++AEFYG+VH +L+ N P RI MMPIG
Sbjct: 18 PTSSVATKLYSGLKLQAASSFRAARPNVTAEFYGKVHNTLHCRYANHNPSMARIRMMPIG 77
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
TPKV YRTPGEG+WQWVD+WNALYRERVIFIGQ IDEEFSNQILATMLYLDS+D+SK++Y
Sbjct: 78 TPKVPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEFSNQILATMLYLDSIDNSKKLY 137
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYINGPGGD+TP++AIYDTMQSL+SPV THCVG+AY LA FLLA GEK NRSAMPLSR+A
Sbjct: 138 MYINGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYSLAAFLLAAGEKSNRSAMPLSRVA 197
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
L SPAGAARGQADDI+NEA+ELLR+RDY+F ELS+KTGQP EKITKDLSR+KRF +QEAL
Sbjct: 198 LTSPAGAARGQADDIQNEANELLRIRDYLFNELSKKTGQPLEKITKDLSRMKRFNAQEAL 257
Query: 252 EYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
EYGLIDRI+RPPRIK D PRK+AGTGLG
Sbjct: 258 EYGLIDRIVRPPRIKADAPRKEAGTGLG 285
>gi|356514168|ref|XP_003525778.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Glycine max]
Length = 312
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 203/265 (76%), Positives = 234/265 (88%)
Query: 15 SCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPK 74
S KL+SGLK+Q+ S FG KPN++AEFYG+VH +L+ N RI MMPIGTPK
Sbjct: 48 SVATKLYSGLKLQAASPFGAAKPNVTAEFYGKVHNTLHCRYANHNTSMARIRMMPIGTPK 107
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
V YRTPGEG+WQWVD+WNALYRERVIFIGQ IDEEFSNQILATMLYLDS+++SK++YMYI
Sbjct: 108 VPYRTPGEGTWQWVDVWNALYRERVIFIGQEIDEEFSNQILATMLYLDSIENSKKLYMYI 167
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
NGPGGD+TP++AIYDTMQSL+SPV THCVG+AY LA FLLA GEKGNRSAMPLSR+AL S
Sbjct: 168 NGPGGDLTPSMAIYDTMQSLQSPVATHCVGYAYSLAAFLLAAGEKGNRSAMPLSRVALTS 227
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
PAGAARGQADDI+NEA+ELLR+RDY+F EL++KTGQP EKITKDLSR+KRF +QEALEYG
Sbjct: 228 PAGAARGQADDIQNEANELLRIRDYLFNELAQKTGQPVEKITKDLSRMKRFNAQEALEYG 287
Query: 255 LIDRIIRPPRIKEDMPRKDAGTGLG 279
LIDRI+RPPRIK D PRK+AGTGLG
Sbjct: 288 LIDRIVRPPRIKADAPRKEAGTGLG 312
>gi|297844106|ref|XP_002889934.1| hypothetical protein ARALYDRAFT_471391 [Arabidopsis lyrata subsp.
lyrata]
gi|297335776|gb|EFH66193.1| hypothetical protein ARALYDRAFT_471391 [Arabidopsis lyrata subsp.
lyrata]
Length = 279
Score = 432 bits (1111), Expect = e-119, Method: Compositional matrix adjust.
Identities = 205/281 (72%), Positives = 240/281 (85%), Gaps = 4/281 (1%)
Query: 1 MSVSLNANLYQPSLS--CNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRND 58
M+VS N L+QPSLS C++KL+SGLK QS S +G NL+ EFYGRVHKSL SG
Sbjct: 1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFITSGYQNLNKEFYGRVHKSLQSG--TG 58
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
K R R+ MMPIGTP+V YR EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATM
Sbjct: 59 KASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATM 118
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
LYLD++DDS+R+YMY+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GE
Sbjct: 119 LYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGE 178
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKD 238
KG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ TGQP E++ KD
Sbjct: 179 KGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKD 238
Query: 239 LSRIKRFGSQEALEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
LSR+KRF ++EA+EYGLID+I+RPPRIKED PR+D GLG
Sbjct: 239 LSRVKRFNAEEAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279
>gi|18391391|ref|NP_563907.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
gi|75315329|sp|Q9XJ36.1|CLPR2_ARATH RecName: Full=ATP-dependent Clp protease proteolytic
subunit-related protein 2, chloroplastic; Short=ClpR2;
Short=nClpP2; Flags: Precursor
gi|8778627|gb|AAF79635.1|AC025416_9 F5O11.13 [Arabidopsis thaliana]
gi|5360589|dbj|BAA82066.1| nClpP2 [Arabidopsis thaliana]
gi|17065388|gb|AAL32848.1| similar to nClpP2 [Arabidopsis thaliana]
gi|20148625|gb|AAM10203.1| similar to nClpP2 dbj|BAA82066.1 [Arabidopsis thaliana]
gi|332190755|gb|AEE28876.1| ATP-dependent Clp protease, protease subunit [Arabidopsis thaliana]
Length = 279
Score = 431 bits (1108), Expect = e-118, Method: Compositional matrix adjust.
Identities = 204/281 (72%), Positives = 240/281 (85%), Gaps = 4/281 (1%)
Query: 1 MSVSLNANLYQPSLS--CNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRND 58
M+VS N L+QPSLS C++KL+SGLK QS S +G NL+ EFYGRV+KSL SG
Sbjct: 1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TG 58
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
K R R+ MMPIGTP+V YR EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATM
Sbjct: 59 KASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATM 118
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
LYLD++DDS+R+YMY+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GE
Sbjct: 119 LYLDTLDDSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGE 178
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKD 238
KG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ TGQP E++ KD
Sbjct: 179 KGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKD 238
Query: 239 LSRIKRFGSQEALEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
LSR+KRF ++EA+EYGLID+I+RPPRIKED PR+D GLG
Sbjct: 239 LSRVKRFNAEEAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279
>gi|16209712|gb|AAL14412.1| At1g12410/F5O11_7 [Arabidopsis thaliana]
Length = 279
Score = 427 bits (1099), Expect = e-117, Method: Compositional matrix adjust.
Identities = 203/281 (72%), Positives = 239/281 (85%), Gaps = 4/281 (1%)
Query: 1 MSVSLNANLYQPSLS--CNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRND 58
M+VS N L+QPSLS C++KL+SGLK QS S +G NL+ EFYGRV+KSL SG
Sbjct: 1 MAVSFNTTLHQPSLSPSCSIKLYSGLKPQSASFLASGYQNLNKEFYGRVYKSLQSG--TG 58
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
K R R+ MMPIGTP+V YR EG+WQWVD+WNALYRERVIFIGQNIDEEFSNQILATM
Sbjct: 59 KASRSRVKMMPIGTPRVPYRNREEGTWQWVDIWNALYRERVIFIGQNIDEEFSNQILATM 118
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
LYLD++D S+R+YMY+NGPGGD+TP+LAIYDTM+SLKSPVGTHCVG AY+LAGFLLA GE
Sbjct: 119 LYLDTLDGSRRIYMYLNGPGGDLTPSLAIYDTMKSLKSPVGTHCVGLAYNLAGFLLAAGE 178
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKD 238
KG+R AMPLSRIAL SPAGAARGQADDI+NEA EL R+RDY+F EL++ TGQP E++ KD
Sbjct: 179 KGHRFAMPLSRIALQSPAGAARGQADDIQNEAKELSRIRDYLFNELAKNTGQPAERVFKD 238
Query: 239 LSRIKRFGSQEALEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
LSR+KRF ++EA+EYGLID+I+RPPRIKED PR+D GLG
Sbjct: 239 LSRVKRFNAEEAIEYGLIDKIVRPPRIKEDAPRQDESAGLG 279
>gi|449459668|ref|XP_004147568.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Cucumis sativus]
gi|449523577|ref|XP_004168800.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Cucumis sativus]
Length = 285
Score = 422 bits (1084), Expect = e-115, Method: Compositional matrix adjust.
Identities = 198/269 (73%), Positives = 230/269 (85%)
Query: 11 QPSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPI 70
QPSLS K+++GLK QS S FG KPN++AEFYG+VHKSL + N K R + MMPI
Sbjct: 17 QPSLSVATKVYTGLKPQSASPFGGAKPNITAEFYGKVHKSLQTRTNNKKAARAQFQMMPI 76
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
GTP+V Y+TPGEG WQWVDLWNALYRERVIFIG +DEEFSNQILATMLYLDSV+ SK++
Sbjct: 77 GTPRVPYKTPGEGFWQWVDLWNALYRERVIFIGDYVDEEFSNQILATMLYLDSVEASKKL 136
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YINGPGGD+TPTLA+YDTMQSLKSP+ THC+G AY++A FLLA GEKGNRSAMPLSRI
Sbjct: 137 YIYINGPGGDLTPTLALYDTMQSLKSPIATHCMGQAYNMAAFLLAAGEKGNRSAMPLSRI 196
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
AL SPAG+ARG+ADDI+NEA++LL++RDY+F ELS+KTGQP EKI KDLS KRF +Q+A
Sbjct: 197 ALQSPAGSARGRADDIQNEANQLLKIRDYLFDELSKKTGQPVEKIHKDLSGTKRFNAQQA 256
Query: 251 LEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
LEYGLIDRI RP RIK D PRKD GTGLG
Sbjct: 257 LEYGLIDRIARPARIKADAPRKDDGTGLG 285
>gi|357477011|ref|XP_003608791.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355509846|gb|AES90988.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 341
Score = 402 bits (1034), Expect = e-110, Method: Compositional matrix adjust.
Identities = 186/273 (68%), Positives = 230/273 (84%), Gaps = 3/273 (1%)
Query: 9 LYQPSLSCNLKLFSGLKIQSPSVFGTGK--PNLSAEFYGRVHKSLYSGIRNDKPIRGRIA 66
+Y P S + K++SGLK+QS FG N++A+F+G+V+K L N KP+R +I
Sbjct: 70 VYSPP-SVSTKIYSGLKLQSSRTFGASSISSNVNAQFFGKVNKVLNFRYANQKPVRAQIR 128
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MMPIGTP+V YRTPGEG+WQWVDLWNALYRERVIFIGQ IDEE SNQILAT+LYLDSVD+
Sbjct: 129 MMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQEIDEELSNQILATLLYLDSVDN 188
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
SK++Y+YINGPGGD+TP +++YDTMQSL++P+ THC+G AY LA FLLA GEKGNR+AMP
Sbjct: 189 SKKLYLYINGPGGDLTPCMSLYDTMQSLQTPICTHCIGQAYGLAAFLLAAGEKGNRTAMP 248
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
L+RI + SPAGAARG+ADDI+NEA ELLR+RDY+F EL+ KTGQP EKIT+DL R+KRF
Sbjct: 249 LARIVIQSPAGAARGRADDIQNEAAELLRIRDYLFTELANKTGQPVEKITEDLKRVKRFD 308
Query: 247 SQEALEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
+QEAL+YGLID+I+RP RIK D PRKDAG+G+G
Sbjct: 309 AQEALDYGLIDKIVRPRRIKADAPRKDAGSGIG 341
>gi|357477013|ref|XP_003608792.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355509847|gb|AES90989.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 213
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 162/213 (76%), Positives = 193/213 (90%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MMPIGTP+V YRTPGEG+WQWVDLWNALYRERVIFIGQ IDEE SNQILAT+LYLDSVD+
Sbjct: 1 MMPIGTPRVPYRTPGEGTWQWVDLWNALYRERVIFIGQEIDEELSNQILATLLYLDSVDN 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
SK++Y+YINGPGGD+TP +++YDTMQSL++P+ THC+G AY LA FLLA GEKGNR+AMP
Sbjct: 61 SKKLYLYINGPGGDLTPCMSLYDTMQSLQTPICTHCIGQAYGLAAFLLAAGEKGNRTAMP 120
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
L+RI + SPAGAARG+ADDI+NEA ELLR+RDY+F EL+ KTGQP EKIT+DL R+KRF
Sbjct: 121 LARIVIQSPAGAARGRADDIQNEAAELLRIRDYLFTELANKTGQPVEKITEDLKRVKRFD 180
Query: 247 SQEALEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
+QEAL+YGLID+I+RP RIK D PRKDAG+G+G
Sbjct: 181 AQEALDYGLIDKIVRPRRIKADAPRKDAGSGIG 213
>gi|357110855|ref|XP_003557231.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-related
protein 2, chloroplastic-like [Brachypodium distachyon]
Length = 296
Score = 357 bits (916), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 165/274 (60%), Positives = 217/274 (79%), Gaps = 13/274 (4%)
Query: 6 NANLYQP--------SLSCNLKLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSG 54
N++ + P SL K+F GLK Q+ G+ + PN++A FY V++ + G
Sbjct: 10 NSSCFHPRAVASSPSSLCVGTKVFVGLKAQTK--LGSSESSCPNVNARFYTAVNRRVSLG 67
Query: 55 IRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQI 114
+ N + R RI+MMP+GTP+V YRTPGEG+WQW+D+WNALYRER+IFIG NIDEEFSNQ+
Sbjct: 68 LSNKRATRARISMMPVGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQV 127
Query: 115 LATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLL 174
LA+MLYLDSVDDSK++ +YINGPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+L
Sbjct: 128 LASMLYLDSVDDSKKIILYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFIL 187
Query: 175 AGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 234
A G+KG+R+ MPL RI+L SPAGAARGQADDI NEA+EL R+R+Y++ +LS TG P EK
Sbjct: 188 AAGQKGSRTGMPLCRISLQSPAGAARGQADDIENEANELNRIRNYLYGKLSEHTGHPVEK 247
Query: 235 ITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
I +DL R+KRF ++ ALEYG+IDRI+ P RIK++
Sbjct: 248 IHEDLDRVKRFDAEGALEYGIIDRIVMPSRIKKE 281
>gi|115466260|ref|NP_001056729.1| Os06g0136800 [Oryza sativa Japonica Group]
gi|55296987|dbj|BAD68462.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|113594769|dbj|BAF18643.1| Os06g0136800 [Oryza sativa Japonica Group]
gi|215692474|dbj|BAG87894.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704676|dbj|BAG94304.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737501|dbj|BAG96631.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218197521|gb|EEC79948.1| hypothetical protein OsI_21540 [Oryza sativa Indica Group]
gi|222634917|gb|EEE65049.1| hypothetical protein OsJ_20046 [Oryza sativa Japonica Group]
Length = 297
Score = 357 bits (915), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 160/253 (63%), Positives = 213/253 (84%), Gaps = 5/253 (1%)
Query: 19 KLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKV 75
K+F GLK Q+ G+ + PN++A FY V++ + G+ N + R RI+MMP+GTP+V
Sbjct: 32 KVFVGLKAQTK--LGSSESSCPNVTAGFYTAVNRRISLGLSNKRATRARISMMPVGTPRV 89
Query: 76 LYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYIN 135
YRTPGEG+WQW+D+WNALYRER+IFIG +IDEEFSNQ+LA+MLYLDSVD++K++ +YIN
Sbjct: 90 PYRTPGEGTWQWLDIWNALYRERIIFIGDSIDEEFSNQVLASMLYLDSVDNTKKILLYIN 149
Query: 136 GPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP 195
GPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+LA GEKG+R+ MPL RI+L SP
Sbjct: 150 GPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSP 209
Query: 196 AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGL 255
AGAARGQADDI NEA+EL+R+++Y++ +LS TG P +KI +DLSR+KRF ++ ALEYG+
Sbjct: 210 AGAARGQADDIENEANELIRIKNYLYSKLSEHTGHPVDKIHEDLSRVKRFDAEGALEYGI 269
Query: 256 IDRIIRPPRIKED 268
IDRIIRP RIK++
Sbjct: 270 IDRIIRPSRIKKE 282
>gi|116785923|gb|ABK23909.1| unknown [Picea sitchensis]
gi|148907936|gb|ABR17088.1| unknown [Picea sitchensis]
Length = 293
Score = 353 bits (907), Expect = 4e-95, Method: Compositional matrix adjust.
Identities = 169/275 (61%), Positives = 213/275 (77%), Gaps = 3/275 (1%)
Query: 7 ANLYQPSLSCNLKLFSGLKIQSPS-VFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRI 65
A L P+ C++ + GL+ Q P +F + +LS + +V +SL S + R ++
Sbjct: 20 ATLPSPT-RCSINAYVGLRPQCPQGLFRNERSDLSIALHEKVQQSLISRLGTKGTCRSQV 78
Query: 66 AMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
MMPIGTP+V YRTPGEGSWQWVD+WNALYRER+I+I Q IDEEFSNQILATMLYLDSVD
Sbjct: 79 TMMPIGTPRVPYRTPGEGSWQWVDIWNALYRERIIYIAQYIDEEFSNQILATMLYLDSVD 138
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
SK + +YINGPGGDVTP +++YDTMQSLKSP+GT C+G+A++LAGFLLA G KG R A
Sbjct: 139 SSKDITLYINGPGGDVTPCMSMYDTMQSLKSPIGTLCLGYAFNLAGFLLAAGAKGKRGAS 198
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
P SR+ L S AG+ARGQADDI NEA EL+R R+Y+F++L+R TGQP EKITKDL R+ F
Sbjct: 199 PSSRVVLQSVAGSARGQADDIENEAKELIRTRNYMFEQLARNTGQPLEKITKDLRRVMYF 258
Query: 246 GSQEALEYGLIDRIIRPPRIKEDM-PRKDAGTGLG 279
+QEALEYG+IDRI+RPPRIK D +++AG G+G
Sbjct: 259 NAQEALEYGIIDRILRPPRIKPDASSKREAGAGIG 293
>gi|195612324|gb|ACG27992.1| ATP-dependent Clp protease proteolytic subunit 2 [Zea mays]
gi|238007600|gb|ACR34835.1| unknown [Zea mays]
gi|413953314|gb|AFW85963.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
Length = 292
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 161/259 (62%), Positives = 213/259 (82%), Gaps = 5/259 (1%)
Query: 13 SLSCNLKLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMP 69
SLS K+F GL+ Q+ G+ + PN+SA F+ V++ + + K R RI+MMP
Sbjct: 21 SLSVGTKVFVGLRAQTK--LGSSESSCPNVSAGFHTAVNRRISLRLSKKKATRARISMMP 78
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
IGTP+V YRTPGEG+WQW+D+WNALYRER+IFIG NIDEEFSNQ+LA+MLYLDS+D+SK+
Sbjct: 79 IGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSIDNSKK 138
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YINGPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+LA GEKG+R+ MPL R
Sbjct: 139 IMLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCR 198
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I+L SPAGAARGQADDI NEA+EL+R+++Y++ +L+ TG EKI +DLSR+KRF ++
Sbjct: 199 ISLQSPAGAARGQADDIENEANELIRIKNYLYGKLAGHTGHSVEKIHEDLSRVKRFDAEG 258
Query: 250 ALEYGLIDRIIRPPRIKED 268
ALEYG+IDRI+RP RIK++
Sbjct: 259 ALEYGIIDRIVRPSRIKKE 277
>gi|162463534|ref|NP_001106056.1| LOC100125655 [Zea mays]
gi|150256106|gb|ABR68025.1| PL5L15 [Zea mays]
Length = 292
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 161/259 (62%), Positives = 212/259 (81%), Gaps = 5/259 (1%)
Query: 13 SLSCNLKLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMP 69
SLS K+F GL+ Q+ G+ + PN+SA F+ V++ + + K R RI+ MP
Sbjct: 21 SLSVGTKVFVGLRAQTK--LGSSESSCPNVSAGFHTAVNRRISLRLSKKKATRARISTMP 78
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
IGTP+V YRTPGEG+WQW+D+WNALYRER+IFIG NIDEEFSNQ+LA+MLYLDS+D+SK+
Sbjct: 79 IGTPRVPYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSIDNSKK 138
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YINGPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+LA GEKG+R+ MPL R
Sbjct: 139 IMLYINGPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCR 198
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I+L SPAGAARGQADDI NEA+EL+R++DY++ +L+ TG EKI +DLSR+KRF ++
Sbjct: 199 ISLQSPAGAARGQADDIENEANELIRIKDYLYGKLAGHTGHSVEKIHEDLSRVKRFDAKG 258
Query: 250 ALEYGLIDRIIRPPRIKED 268
ALEYG+IDRI+RP RIK++
Sbjct: 259 ALEYGIIDRIVRPSRIKKE 277
>gi|326499826|dbj|BAJ90748.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 271
Score = 348 bits (892), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 156/253 (61%), Positives = 210/253 (83%), Gaps = 5/253 (1%)
Query: 19 KLFSGLKIQSPSVFGTGK---PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKV 75
K+F GLK Q+ G+ + PN++A FY V++ + G+ N + R RI+MMP+GTP+V
Sbjct: 4 KVFVGLKAQTR--LGSSESSCPNVNARFYTAVNRRVSLGLSNKRATRARISMMPVGTPRV 61
Query: 76 LYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYIN 135
YRTPGEG+WQW+D+WNALYRER+IFIG NIDEEFSNQ+LA+MLYLDSVDD+K++ +YIN
Sbjct: 62 PYRTPGEGTWQWLDIWNALYRERIIFIGDNIDEEFSNQVLASMLYLDSVDDTKKILLYIN 121
Query: 136 GPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP 195
GPGGD+TP +A+YDTM SLKSP+GTHC+GFA++LAGF+LA G+KG+R+ MPL R++L SP
Sbjct: 122 GPGGDLTPCMALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGQKGSRTGMPLCRVSLQSP 181
Query: 196 AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGL 255
AGAARGQADDI NE++EL R+++Y++ +L+ TG EK+ +DLSR KRF ++ ALEYG+
Sbjct: 182 AGAARGQADDIENESNELNRIKNYLYGKLAEHTGHSVEKVHEDLSRSKRFDAEGALEYGI 241
Query: 256 IDRIIRPPRIKED 268
IDRI+RP RIK++
Sbjct: 242 IDRIVRPSRIKKE 254
>gi|168041627|ref|XP_001773292.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675334|gb|EDQ61830.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 220
Score = 324 bits (831), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 151/220 (68%), Positives = 189/220 (85%), Gaps = 2/220 (0%)
Query: 62 RGRIAMM-PIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
RG++ MM PIGTPKV YRTPGEG WQWVD+WN LYRER+IF+GQ IDEEF NQ++ATMLY
Sbjct: 1 RGKVTMMAPIGTPKVPYRTPGEGGWQWVDIWNVLYRERIIFLGQYIDEEFGNQVVATMLY 60
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LDSVD+SK +++YIN PGGD+TP +AIYDTM+S+KSPVGT +G+AY+ AG LLA G KG
Sbjct: 61 LDSVDNSKPMHLYINCPGGDITPCMAIYDTMESIKSPVGTLALGYAYNNAGLLLAAGAKG 120
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLS 240
R AMPL+R+AL SPAGAARGQADDI NEA EL RVR+Y+++++S+KTGQPF+K+ KDL+
Sbjct: 121 MRVAMPLTRVALMSPAGAARGQADDIINEAKELNRVRNYVYEQVSKKTGQPFDKVVKDLN 180
Query: 241 RIKRFGSQEALEYGLIDRIIRPPRIKEDMPRKDA-GTGLG 279
RIKRF + EALEYG+ID+++RP RIK D R+++ G GLG
Sbjct: 181 RIKRFSANEALEYGIIDKVVRPKRIKPDARRQESIGVGLG 220
>gi|168036370|ref|XP_001770680.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678041|gb|EDQ64504.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 214
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 148/214 (69%), Positives = 185/214 (86%), Gaps = 1/214 (0%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M PIGTPKV YRTPGEG WQWVD+WN LYRER+IF+GQ IDEEF NQ++ATMLYLDSVD+
Sbjct: 1 MAPIGTPKVPYRTPGEGGWQWVDIWNVLYRERIIFLGQYIDEEFGNQVVATMLYLDSVDN 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
SK +Y+YIN PGGD+TP +AIYDTM+S+KSPVGT +G+AY+ AG LLA G KG R+AMP
Sbjct: 61 SKPMYLYINCPGGDITPCMAIYDTMESIKSPVGTLALGYAYNNAGLLLAAGAKGMRTAMP 120
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
L+R+AL SPAGAARGQADDI NEA EL RVR+Y+++++S+KTGQP +K+ KDL+RIKRF
Sbjct: 121 LTRVALMSPAGAARGQADDIINEAKELNRVRNYVYEQVSKKTGQPVDKVMKDLNRIKRFS 180
Query: 247 SQEALEYGLIDRIIRPPRIKEDMPRKDA-GTGLG 279
++EALEYG+ID+++RP RIK D R+++ G GLG
Sbjct: 181 AKEALEYGIIDKVVRPKRIKPDARRQESVGVGLG 214
>gi|302780906|ref|XP_002972227.1| hypothetical protein SELMODRAFT_148310 [Selaginella moellendorffii]
gi|300159694|gb|EFJ26313.1| hypothetical protein SELMODRAFT_148310 [Selaginella moellendorffii]
Length = 271
Score = 320 bits (821), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/220 (68%), Positives = 186/220 (84%), Gaps = 1/220 (0%)
Query: 61 IRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
R ++ MMPIGTPKV YRTPGEG+WQ+VD+WN LYRER+IFIGQ+IDEEF NQ+LATMLY
Sbjct: 52 CRAQVTMMPIGTPKVPYRTPGEGTWQFVDIWNVLYRERIIFIGQHIDEEFGNQVLATMLY 111
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LDSVD SK ++ Y++ PGGD+TP++AIYDTM S+KS +GT +G+AY++AGFLLA GEKG
Sbjct: 112 LDSVDSSKDLHFYMSCPGGDLTPSMAIYDTMGSVKSRMGTMALGYAYNIAGFLLAAGEKG 171
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLS 240
R++MPL+RIA+ P GAARG+A DI+NEA EL RVRDY+FK+L+ KTGQP EKI KD S
Sbjct: 172 LRTSMPLTRIAMQPPQGAARGKAADIQNEAKELSRVRDYLFKQLAVKTGQPEEKIHKDFS 231
Query: 241 RIKRFGSQEALEYGLIDRIIRPPRIKEDMPRK-DAGTGLG 279
RIKRF +QEAL+YGLID+IIRPP +K D K +AG G+G
Sbjct: 232 RIKRFSAQEALDYGLIDKIIRPPTVKPDASSKAEAGRGIG 271
>gi|302804775|ref|XP_002984139.1| hypothetical protein SELMODRAFT_271686 [Selaginella moellendorffii]
gi|300147988|gb|EFJ14649.1| hypothetical protein SELMODRAFT_271686 [Selaginella moellendorffii]
Length = 274
Score = 319 bits (817), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 152/234 (64%), Positives = 190/234 (81%), Gaps = 1/234 (0%)
Query: 47 VHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNI 106
V +S + R R ++ MMPIGTPKV YRTPGEG+WQ+VD+WN LYRER+IFIGQ+I
Sbjct: 41 VSRSANARPRRAGICRAQVTMMPIGTPKVPYRTPGEGTWQFVDIWNVLYRERIIFIGQHI 100
Query: 107 DEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFA 166
DEEF NQ+LATMLYLDSVD SK ++ Y++ PGGD+TP++AIYDTM S+KS +GT +G+A
Sbjct: 101 DEEFGNQVLATMLYLDSVDSSKDLHFYMSCPGGDLTPSMAIYDTMGSVKSRMGTMALGYA 160
Query: 167 YHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
Y++AGFLLA GEKG R++MPL+RIA+ P GAARG+A DI+NEA EL RVRDY+FK+L+
Sbjct: 161 YNIAGFLLAAGEKGMRTSMPLTRIAIQPPQGAARGKAADIQNEAKELSRVRDYLFKQLAV 220
Query: 227 KTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKEDMPRK-DAGTGLG 279
KTG P EKI KD SRIKRF +QEAL+YGLID+IIRPP +K D K +AG G+G
Sbjct: 221 KTGHPEEKIHKDFSRIKRFSAQEALDYGLIDKIIRPPTVKPDASSKGEAGRGIG 274
>gi|302770831|ref|XP_002968834.1| hypothetical protein SELMODRAFT_91162 [Selaginella moellendorffii]
gi|302784736|ref|XP_002974140.1| hypothetical protein SELMODRAFT_100139 [Selaginella moellendorffii]
gi|300158472|gb|EFJ25095.1| hypothetical protein SELMODRAFT_100139 [Selaginella moellendorffii]
gi|300163339|gb|EFJ29950.1| hypothetical protein SELMODRAFT_91162 [Selaginella moellendorffii]
Length = 221
Score = 273 bits (697), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 164/203 (80%)
Query: 62 RGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
R ++ MMP+G PKV YR EGSWQ+VD+WN LY+ER++FIGQ+ID++ +N+++ATMLYL
Sbjct: 1 RAQVVMMPLGVPKVPYRASSEGSWQYVDIWNVLYQERIVFIGQHIDDDLANRVVATMLYL 60
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
DSVD SK ++ YI+ PGG +TP++AIYDTM S++S + T +G AY +AGFLLA GEKG
Sbjct: 61 DSVDSSKHLHFYISCPGGSLTPSMAIYDTMGSVRSGIATLALGAAYDIAGFLLAAGEKGM 120
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSR 241
R AMPL+RIAL P GA RGQADDI+ E +EL R+RD ++++L+ TGQP +KI KDL R
Sbjct: 121 RMAMPLARIALQPPEGATRGQADDIQTEVNELGRLRDCLYEQLAINTGQPVDKIHKDLDR 180
Query: 242 IKRFGSQEALEYGLIDRIIRPPR 264
+K F +QEAL+YGLID+I+RPP+
Sbjct: 181 MKIFSAQEALDYGLIDKIVRPPK 203
>gi|307104278|gb|EFN52533.1| hypothetical protein CHLNCDRAFT_49097 [Chlorella variabilis]
Length = 202
Score = 238 bits (607), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 115/197 (58%), Positives = 147/197 (74%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YRTP EGSWQWVD+WN LYRER+IF+ + +DEE NQ++ATMLYLDS ++
Sbjct: 1 MPIGVPRVPYRTPKEGSWQWVDIWNCLYRERIIFLSKPVDEELGNQLVATMLYLDS-ENK 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN GG+V P LAI+DTM+ +KS VGT G ++GFLLA G+KG RSA+
Sbjct: 60 KDMNIYINCSGGEVVPCLAIHDTMRHIKSDVGTVGFGGCMGMSGFLLAVGKKGKRSALQN 119
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P+GAARGQA DI EA ELLR+RDY+ L++ TGQPF+K+ +D SR F +
Sbjct: 120 TRIMVHHPSGAARGQASDINREARELLRIRDYMDNILAQATGQPFDKVAQDFSRNCYFDT 179
Query: 248 QEALEYGLIDRIIRPPR 264
EA EYGLID I+RP R
Sbjct: 180 SEAQEYGLIDNIVRPRR 196
>gi|384245453|gb|EIE18947.1| hypothetical protein COCSUDRAFT_20220 [Coccomyxa subellipsoidea
C-169]
Length = 203
Score = 236 bits (602), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 148/200 (74%), Gaps = 1/200 (0%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MMPIG P+V YR P G WQWVD+WN LYRER+IF+ + +DEE NQ++ATMLYLDS ++
Sbjct: 1 MMPIGVPRVPYRAPQAGGWQWVDIWNCLYRERIIFLSKAVDEELGNQLVATMLYLDS-EN 59
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN GGDV P LAI+DTM+ + S VGT G ++GFLLA G+KG R A+P
Sbjct: 60 KKDITLYINCSGGDVVPCLAIFDTMKYIGSDVGTVGFGGCMGMSGFLLAVGKKGKRYALP 119
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L P+G+ARGQA DI NEA EL+R+R+Y+ + LS+ TGQP EK+ D +R K F
Sbjct: 120 NTRIMLHHPSGSARGQASDINNEARELMRLRNYVNQVLSQATGQPIEKVQFDFNRNKYFD 179
Query: 247 SQEALEYGLIDRIIRPPRIK 266
++EA EYG+ID+++RP R +
Sbjct: 180 TKEAQEYGVIDQVVRPLRTQ 199
>gi|449017357|dbj|BAM80759.1| ATP-dependent Clp protease proteolytic subunit [Cyanidioschyzon
merolae strain 10D]
Length = 255
Score = 236 bits (601), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 107/206 (51%), Positives = 149/206 (72%)
Query: 55 IRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQI 114
+R + RI MMP+G PKV +R PG +WVD++N +YRER+IF+G +D+E +NQI
Sbjct: 45 VRESRSSSARIYMMPVGVPKVAFRVPGGTQAEWVDIYNRMYRERIIFLGSELDDELANQI 104
Query: 115 LATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLL 174
+A MLYLDS D++K +Y+YIN PGG V LA+YDTM+ +KS V T VG A ++ FLL
Sbjct: 105 IAVMLYLDSEDNTKPIYLYINSPGGSVVAGLAVYDTMRHIKSEVVTINVGLAASMSSFLL 164
Query: 175 AGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 234
A GEKG R A+P SR+ + P G A+GQA D++ EA+++LR+RD + E S+ TGQP+EK
Sbjct: 165 AAGEKGKRFALPHSRVMIHQPLGGAQGQASDLKVEAEQILRIRDALTYEYSKMTGQPYEK 224
Query: 235 ITKDLSRIKRFGSQEALEYGLIDRII 260
+ +D+SR +QEA+EYGLIDR+I
Sbjct: 225 LIRDMSRDNFMSAQEAVEYGLIDRVI 250
>gi|255078128|ref|XP_002502644.1| predicted protein [Micromonas sp. RCC299]
gi|226517909|gb|ACO63902.1| predicted protein [Micromonas sp. RCC299]
Length = 279
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 118/225 (52%), Positives = 154/225 (68%), Gaps = 8/225 (3%)
Query: 46 RVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQN 105
+VH SL + K R MMPIG P+V Y+TP E SWQWVD+WN LYRER++++GQ
Sbjct: 57 KVHASLAVAGGSGKGARSVATMMPIGVPRVPYKTPNENSWQWVDIWNCLYRERIVWVGQT 116
Query: 106 IDEEFSNQILATMLYLDSVDDS-KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVG 164
IDEE NQ++ATMLYLDS++ K +Y+YIN GGDV PT+AI DTM +KS VG CVG
Sbjct: 117 IDEELGNQLVATMLYLDSIEKGGKDIYLYINTEGGDVVPTMAILDTMGYIKSDVG--CVG 174
Query: 165 F--AYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFK 222
F A + G LLA G KG R+A+P + I L PAG ARG A DI NE ELL++R I K
Sbjct: 175 FGSARAMGGMLLANGAKGKRAALPNTCIMLHHPAGVARGSASDIHNEGKELLKIRAKINK 234
Query: 223 ELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII---RPPR 264
+SR TGQP EK+ +D+ R +++AL+YG++D+++ R PR
Sbjct: 235 MVSRATGQPEEKVHEDIRRDFHLTAEQALDYGIVDKVLYKRRGPR 279
>gi|308813209|ref|XP_003083911.1| putative ATP-dependent Clp protease proteolytic subunit (ISS)
[Ostreococcus tauri]
gi|116055793|emb|CAL57878.1| putative ATP-dependent Clp protease proteolytic subunit (ISS)
[Ostreococcus tauri]
Length = 292
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 146/199 (73%)
Query: 66 AMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
MMPIG P+V Y+TP E SWQWVD+WN LYRER+I+IGQ IDEE NQ++ATML+LDSVD
Sbjct: 91 TMMPIGVPRVPYKTPNESSWQWVDIWNCLYRERIIWIGQTIDEELGNQLVATMLFLDSVD 150
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
+K +Y+YI GG + PT+AI DTM+ LK+ VGT G A + G LLA G+KG R+A+
Sbjct: 151 RNKPMYLYITSEGGQIVPTMAIMDTMKHLKAEVGTVGFGSARAMGGLLLASGKKGKRAAL 210
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
P + I L P+G ARG A D++NE EL+R+R I K++S TG+P + +++++ R K F
Sbjct: 211 PNTCIMLHHPSGVARGSASDVQNEGKELMRIRSQINKKISDITGRPVDVVSEEIRRDKHF 270
Query: 246 GSQEALEYGLIDRIIRPPR 264
++ALEYG+ID+I+ PR
Sbjct: 271 TPEQALEYGIIDKILYRPR 289
>gi|399949673|gb|AFP65331.1| ATP-dependent, proteolytic subunit [Chroomonas mesostigmatica
CCMP1168]
Length = 234
Score = 230 bits (587), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 143/197 (72%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
I MMPIG PKV YR PG S WVD++N LYRER+IF+GQ ID+E +NQI+A MLYLDS
Sbjct: 36 IKMMPIGVPKVAYRVPGAPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSE 95
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D+SK +Y+YIN PGG V LA+YDTM+ +KS V T VG A +A F+LA GEKG R A
Sbjct: 96 DNSKPIYLYINSPGGSVISGLAMYDTMRHIKSEVVTINVGLAASMASFILAAGEKGKRLA 155
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P SRI + P G A+GQA DI+ EA ++LR+R + ++ ++ TG+P+EK+ +D+ R
Sbjct: 156 LPHSRIMIHQPMGGAQGQASDIKVEAQQILRIRKSLTEDYAQMTGRPYEKVLQDMDRDNF 215
Query: 245 FGSQEALEYGLIDRIIR 261
+ EA+EYGLIDR+I
Sbjct: 216 MSAYEAVEYGLIDRVIE 232
>gi|330040589|ref|XP_003239964.1| ATP-dependent, proteolytic subunit [Cryptomonas paramecium]
gi|327206890|gb|AEA39066.1| ATP-dependent, proteolytic subunit [Cryptomonas paramecium]
Length = 232
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 144/202 (71%), Gaps = 1/202 (0%)
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
KP + +I MMPIG PKV YR PG S W+D++N LYRER+IF+GQ ID+E +NQI+A M
Sbjct: 30 KPFQ-KIRMMPIGVPKVAYRIPGSSSADWIDIYNRLYRERIIFLGQEIDDEIANQIIAVM 88
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
LYLDS +SK +Y+YIN PGG V LA+YDT+Q +KS V T +G A +A F+LA G+
Sbjct: 89 LYLDSESNSKPIYLYINSPGGSVISGLALYDTIQHVKSEVITVNIGLAASMASFILASGK 148
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKD 238
KG R A+P SR+ + P G A GQA DI EA ++L+++ + ++ +R TG+P+EK+ +D
Sbjct: 149 KGKRLALPHSRVMIHQPMGGAHGQASDIEVEAQQILKIKKTLTEDYARMTGKPYEKVLQD 208
Query: 239 LSRIKRFGSQEALEYGLIDRII 260
+ R S EALEYGLIDRII
Sbjct: 209 MDRDNFMSSHEALEYGLIDRII 230
>gi|452822409|gb|EME29429.1| ATP-dependent Clp protease, protease subunit [Galdieria
sulphuraria]
Length = 262
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 119/253 (47%), Positives = 157/253 (62%), Gaps = 14/253 (5%)
Query: 21 FSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIR-------------GRIAM 67
F L Q+ + F T + S +F S IR+ K R + M
Sbjct: 6 FVWLTCQTATRFDTNCRSCS-QFTNHSLGQTVSFIRSSKAPRLGWTRAKAQQSRLENLTM 64
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG WVD++N LYRER+IF+GQ ID+E SNQI+A MLYLDS D++
Sbjct: 65 MPIGVPKVAYRVPGAPQADWVDIYNRLYRERIIFLGQEIDDEISNQIIAVMLYLDSEDNT 124
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V LAIYDTM+ + S V T VG A ++ FLLA GEKG R A+P
Sbjct: 125 KPIYLYINSPGGSVIAGLAIYDTMKHIASEVVTVNVGLAASMSSFLLAAGEKGKRLALPH 184
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SR+ + P G A+GQA DI+ EA ++LR+++ + ++ TGQP+EK+ KDL R +
Sbjct: 185 SRVMIHQPMGGAKGQASDIQVEARQILRIKESLVRDYCNMTGQPYEKMLKDLDRDNFMSA 244
Query: 248 QEALEYGLIDRII 260
EA+EYGLIDR+I
Sbjct: 245 YEAIEYGLIDRVI 257
>gi|160331468|ref|XP_001712441.1| clpP2 [Hemiselmis andersenii]
gi|159765889|gb|ABW98116.1| clpP2 [Hemiselmis andersenii]
Length = 233
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 143/197 (72%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+ MMPIG PKV YR PG S WVD++N LYRER+IF+GQ ID+E +NQI+A MLYLDS
Sbjct: 33 VFMMPIGVPKVAYRVPGAPSADWVDIYNRLYRERIIFLGQEIDDEIANQIIAVMLYLDSE 92
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D+SK +Y+YIN PGG V LA+YDT++ +KS V T VG A +A F+LA GEKG R A
Sbjct: 93 DNSKPIYLYINSPGGSVISGLAMYDTIRHIKSEVVTINVGLAASMASFILAAGEKGKRLA 152
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P SRI + P G A+GQA DI+ EA ++LR+R + ++ ++ TG+P+EK+ +D+ R
Sbjct: 153 LPHSRIMIHQPMGGAQGQASDIKVEAQQILRIRKSLTEDYAQMTGRPYEKVLQDMDRDNF 212
Query: 245 FGSQEALEYGLIDRIIR 261
+ EA+EYGLIDR+I
Sbjct: 213 MSAYEAVEYGLIDRVIE 229
>gi|428305261|ref|YP_007142086.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428246796|gb|AFZ12576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 198
Score = 227 bits (579), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 139/193 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRLPGEQYTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGSVTAGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G ARGQA DI EA E++R+R + + + TG+P EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGARGQATDIEIEAREIIRIRRQLNQIYANNTGKPLEKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA+EYGLIDR+I
Sbjct: 181 QEAMEYGLIDRVI 193
>gi|162606094|ref|XP_001713562.1| ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
gi|13794482|gb|AAK39857.1|AF165818_65 ATP-dependent Clp protease proteolytic subunit [Guillardia theta]
Length = 233
Score = 225 bits (573), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/219 (49%), Positives = 147/219 (67%), Gaps = 7/219 (3%)
Query: 43 FYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFI 102
FY + H + + N I MMPIG PKV YR PG S WVD++N LYRER+IF+
Sbjct: 15 FYKKKHNVTSNNLIN-------IKMMPIGVPKVAYRVPGSPSADWVDIYNRLYRERIIFL 67
Query: 103 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHC 162
GQ ID+E +NQI+A MLYLDS D+SK +YMYIN PGG V LA+YDTM+ +KS V T
Sbjct: 68 GQEIDDEIANQIIAVMLYLDSEDNSKPIYMYINSPGGSVISGLAMYDTMRHIKSEVITIN 127
Query: 163 VGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFK 222
VG A ++ F+LA GEKG R A+P SRI + P G A+GQA DI EA ++L++R + +
Sbjct: 128 VGLAASMSSFILAAGEKGKRLALPHSRIMIHQPMGGAQGQASDIEVEAQQILKIRKSLTE 187
Query: 223 ELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
+ + +G+ +EK+ +D+ R S EAL+YGLID++I
Sbjct: 188 DYAEMSGRSYEKVLQDMDRDNFMSSYEALDYGLIDKVIE 226
>gi|428313411|ref|YP_007124388.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
gi|428255023|gb|AFZ20982.1| protease subunit of ATP-dependent protease [Microcoleus sp. PCC
7113]
Length = 198
Score = 224 bits (572), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 137/193 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG +WVD++N LYRER+IF+GQ +D+E +NQI+A MLYLDS D+S
Sbjct: 1 MPIGIPKVPYQLPGSQYTEWVDIYNRLYRERIIFLGQEVDDEIANQIIAVMLYLDSEDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G+KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGKKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E++R+R + + + TGQ EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREIIRIRHQLNQIYANNTGQTLEKIEKDMDRDFFLSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVI 193
>gi|434393186|ref|YP_007128133.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428265027|gb|AFZ30973.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 197
Score = 224 bits (570), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 137/193 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGEAYTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + TGQP EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYADNTGQPLEKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
+EA +YGLID++I
Sbjct: 181 EEAKQYGLIDKVI 193
>gi|412985865|emb|CCO17065.1| ATP-dependent Clp protease proteolytic subunit [Bathycoccus
prasinos]
Length = 342
Score = 223 bits (569), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 144/204 (70%), Gaps = 1/204 (0%)
Query: 62 RGRIA-MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
+ R+A MMPIG P+V Y+TPGE WQWVD+WN LYRER+I+IGQNID+E NQ++ATML+
Sbjct: 138 KKRVATMMPIGVPRVPYKTPGENMWQWVDIWNCLYRERLIWIGQNIDDELGNQLVATMLF 197
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
LD++D +K +Y+YIN GG V PT+AI DTM KS VGT G A + G LL GEKG
Sbjct: 198 LDNLDSTKPMYLYINTEGGQVVPTMAIMDTMNHAKSKVGTVAFGSARAMGGLLLTNGEKG 257
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLS 240
R+A+P + + L P+G ARG A D++NE ELL +R+ I K +++ Q E + K ++
Sbjct: 258 MRAALPNTCVMLHHPSGVARGAASDVQNEGRELLNIREKINKVVAKNCNQDIELVRKTIN 317
Query: 241 RIKRFGSQEALEYGLIDRIIRPPR 264
R K F +++A ++G+ID+++ R
Sbjct: 318 RDKHFTAEQAQDWGIIDKVLYRTR 341
>gi|428224315|ref|YP_007108412.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427984216|gb|AFY65360.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 197
Score = 222 bits (565), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/197 (55%), Positives = 136/197 (69%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGETYTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIILYINSPGGMVTAGMAIYDTMQHVKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + ++ TGQP EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRQELNGIYAKNTGQPIEKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRIIRPPR 264
EA EYGLIDR+I R
Sbjct: 181 YEAKEYGLIDRVIEDHR 197
>gi|224007247|ref|XP_002292583.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
gi|220971445|gb|EED89779.1| catalytic subunit of clp protease [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 220 bits (561), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/196 (53%), Positives = 135/196 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG +WVD++N LYRER+IF+G ID+E +NQI+ MLYLD D +
Sbjct: 1 MPIGVPKVAYRVPGSSGGEWVDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V LAI+D MQ +KS V T +G A +A F+L+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVISGLAIFDAMQLIKSEVITINLGLAASMASFILSAGSKGKRLALPS 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G A+GQA DI+ EA +++R+RD + K S TGQ E+ITKDL R +
Sbjct: 121 SRIMIHQPMGGAQGQAQDIKVEAAQIMRIRDNLVKMYSMFTGQTTEQITKDLDRDNFMSA 180
Query: 248 QEALEYGLIDRIIRPP 263
QEALEYGLIDR++ P
Sbjct: 181 QEALEYGLIDRVLERP 196
>gi|397613755|gb|EJK62404.1| hypothetical protein THAOC_16984 [Thalassiosira oceanica]
Length = 289
Score = 219 bits (559), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 136/199 (68%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
I MMPIG PKV YR PG +WVD++N LYRER+IF+G ID+E +NQI+ MLYLD
Sbjct: 57 ITMMPIGVPKVAYRVPGGAGAEWVDIYNRLYRERIIFLGSEIDDELANQIIGVMLYLDEE 116
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D SK +Y+YIN PGG V LAI+D MQ +KS V T +G A +A F+L+ G KG R A
Sbjct: 117 DSSKPIYLYINSPGGSVIAGLAIFDAMQLIKSEVITINLGLAASMASFILSAGSKGKRLA 176
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P SRI + P G A+GQA DI+ EA +++R+RD + K S TGQ ++ITKDL R
Sbjct: 177 LPSSRIMIHQPMGGAQGQAQDIKVEAAQIMRIRDNLVKMYSMFTGQTTDQITKDLDRDNF 236
Query: 245 FGSQEALEYGLIDRIIRPP 263
+Q ALEYGLIDR++ P
Sbjct: 237 MSAQTALEYGLIDRVLERP 255
>gi|22298615|ref|NP_681862.1| ATP-dependent Clp protease proteolytic subunit [Thermosynechococcus
elongatus BP-1]
gi|34222549|sp|Q8DJZ9.1|CLPP2_THEEB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|22294795|dbj|BAC08624.1| ATP-dependent Clp protease proteolytic subunit 2
[Thermosynechococcus elongatus BP-1]
Length = 198
Score = 219 bits (559), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 134/193 (69%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRLPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LRVR + + + TGQP EKI +D+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRVRRQLNELYAYHTGQPLEKIERDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
+EA YGLIDR+I
Sbjct: 181 EEAKNYGLIDRVI 193
>gi|220906939|ref|YP_002482250.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
7425]
gi|219863550|gb|ACL43889.1| Endopeptidase Clp [Cyanothece sp. PCC 7425]
Length = 198
Score = 219 bits (558), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 134/193 (69%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGEPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLL G G R A+P
Sbjct: 61 KDIVLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGAPGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E++R+R + + + +TGQP EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREIIRIRHQLNQIYADRTGQPLEKIEKDIDRDYFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA +YGLIDR+I
Sbjct: 181 QEAKDYGLIDRVI 193
>gi|219124070|ref|XP_002182335.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406296|gb|EEC46236.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 214
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 135/199 (67%)
Query: 62 RGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
R I MMPIG PKV YR PG S WVD++N LYRER+IF+G ID+E +NQ++ MLYL
Sbjct: 6 RATITMMPIGVPKVAYRVPGSQSADWVDIYNRLYRERIIFLGAEIDDELANQVIGVMLYL 65
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
DS D SK +Y+YIN PGG V LAI+D MQ +KS V T +G A + F+L G KG
Sbjct: 66 DSEDSSKPIYLYINSPGGSVISGLAIFDAMQHIKSEVITINLGLAASMGSFILGAGSKGK 125
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSR 241
R A+P SR + P G A+GQA+DI+ EA +++R+RD + K S TGQ ++I +DL R
Sbjct: 126 RLALPSSRTMIHQPMGGAQGQAEDIKVEAAQIMRIRDNLVKSYSMMTGQTQDRIIQDLDR 185
Query: 242 IKRFGSQEALEYGLIDRII 260
+QEA+EYGL+DR++
Sbjct: 186 DNFMSAQEAMEYGLVDRVL 204
>gi|254409743|ref|ZP_05023524.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
gi|196183740|gb|EDX78723.1| Clp protease [Coleofasciculus chthonoplastes PCC 7420]
Length = 198
Score = 219 bits (558), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 136/193 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG W+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D++
Sbjct: 1 MPIGVPKVPYQLPGSPYSDWIDIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLL G++G R A+P
Sbjct: 61 KDIYLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGKQGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + KTGQ EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGVRGQATDIEIEAREILRIRRQLNQIYADKTGQTVEKIEKDIDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVI 193
>gi|427714259|ref|YP_007062883.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
gi|427378388|gb|AFY62340.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
6312]
Length = 198
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/193 (55%), Positives = 133/193 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGEPYTQWIDIYNRLYRERIIFLGRDVDDEIANQIVAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIMLYINSPGGSVTAGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + TGQ EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRRQLNNLYVHHTGQVLEKIEKDMDRDYFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA +YGLIDR+I
Sbjct: 181 QEAKDYGLIDRVI 193
>gi|332706287|ref|ZP_08426354.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332354935|gb|EGJ34408.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 198
Score = 219 bits (557), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 136/193 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG +W+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D+S
Sbjct: 1 MPIGVPKVPYQMPGSQYTEWIDIYNRLYRERIIFLGKEVDDEITNQIIAVMLYLDSEDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G+KG R A+P
Sbjct: 61 KDIILYINSPGGSVTAGMAIYDTMQHIKSDVVTVCVGLAASMGSFLLAAGKKGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + ++ TGQ EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNEIYAQNTGQSLEKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
EA EYGLID++I
Sbjct: 181 DEAKEYGLIDQVI 193
>gi|428207691|ref|YP_007092044.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428009612|gb|AFY88175.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 197
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 134/193 (69%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QW+D++N LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGEQYTQWIDIYNRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDISLYINSPGGMVTSGMAIYDTMQHIKSDVITICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + TGQP EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRGQLNQIYANNTGQPLEKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
+EA YGLID ++
Sbjct: 181 EEAKAYGLIDHVV 193
>gi|428221047|ref|YP_007105217.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
gi|427994387|gb|AFY73082.1| protease subunit of ATP-dependent protease [Synechococcus sp. PCC
7502]
Length = 198
Score = 218 bits (554), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 135/193 (69%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ QW+D++N LYRER+IF+G+ +D+E +NQI+A MLYLDS D +
Sbjct: 1 MPIGVPKVPYKMPGDPYTQWIDIYNRLYRERIIFLGKEVDDEIANQIVAVMLYLDSEDPT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AI+DTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KDIRLYINSPGGSVTAGMAIFDTMQHIKSDVTTICVGLAASMGSFLLMAGTKGKRFALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G RGQA DI EA E+LR++ + E +++TGQP EKI +D+ R +
Sbjct: 121 SRIMIHQPMGGTRGQATDIEIEAREILRIKKQLNLEYAKRTGQPLEKIERDMDRDYFLSA 180
Query: 248 QEALEYGLIDRII 260
+EA YGLIDR+I
Sbjct: 181 EEAKNYGLIDRVI 193
>gi|17231849|ref|NP_488397.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759069|sp|Q8YP43.1|CLPP3_ANASP RecName: Full=Probable ATP-dependent Clp protease proteolytic
subunit 3; AltName: Full=Endopeptidase Clp 3
gi|17133493|dbj|BAB76056.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 197
Score = 216 bits (551), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 133/193 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + T QP KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTSQPLAKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA+EYGLIDR+I
Sbjct: 181 QEAMEYGLIDRVI 193
>gi|427707093|ref|YP_007049470.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359598|gb|AFY42320.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 197
Score = 216 bits (550), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 106/193 (54%), Positives = 132/193 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + S+ TGQP KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAKEILRIRHQLNNIYSQNTGQPLAKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVI 193
>gi|376403584|ref|YP_005089857.1| clpP gene product (chloroplast) [Pedinomonas minor]
gi|229915491|gb|ACQ90835.1| proteolytic subunit 2 of clp protease [Pedinomonas minor]
Length = 199
Score = 215 bits (548), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 140/192 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE QWVDL+N +YRERV+F Q +D+EF+NQ++ MLYL++ D +
Sbjct: 1 MPIGVPKVPFRMPGESGAQWVDLYNRMYRERVLFFCQELDDEFANQLIGIMLYLNAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YDTM +K V T CVG A +A F+LAGG+KGNR A+P
Sbjct: 61 KPLYIYINSPGGSVTCGIAVYDTMNYIKCGVSTICVGTAASMASFVLAGGDKGNRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G ++GQA ++ +E++E+LR+R + + + KTGQP +I++DL R + +
Sbjct: 121 ARIMIHQPEGGSQGQASEVLSESEEVLRIRRQVGRIYAEKTGQPLNRISRDLDRDQFLSA 180
Query: 248 QEALEYGLIDRI 259
+EA EYGLID+I
Sbjct: 181 KEAKEYGLIDKI 192
>gi|302835744|ref|XP_002949433.1| hypothetical protein VOLCADRAFT_89887 [Volvox carteri f.
nagariensis]
gi|300265260|gb|EFJ49452.1| hypothetical protein VOLCADRAFT_89887 [Volvox carteri f.
nagariensis]
Length = 269
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 104/234 (44%), Positives = 154/234 (65%), Gaps = 7/234 (2%)
Query: 43 FYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFI 102
F+ H+ + S R+ P R MMP+ PKVL R PG+ +WVDLW A ++V+FI
Sbjct: 27 FWQVTHQQISSAKRSGAPKRKVTTMMPVSVPKVLVRPPGQKQMEWVDLWEAYTYQKVVFI 86
Query: 103 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHC 162
+ I EE +N ++A LYLDS+D+ KR+Y ++N PGG+V PTLA+YDTMQ ++S T C
Sbjct: 87 KEAITEEVANNMIALTLYLDSLDN-KRIYYWLNCPGGEVVPTLALYDTMQYVRSKTATVC 145
Query: 163 VGFAYHLAGFLLA-GGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIF 221
G + GFLL GGEKG R AMP S + + P+GA+RGQA ++ E+ EL+R+RDY+
Sbjct: 146 YGLCLGMGGFLLTTGGEKGYRFAMPHSILMMHHPSGASRGQASEMHIESRELVRMRDYLS 205
Query: 222 KELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKEDMPRKDAG 275
+S TGQP++++ ++LSR K ++A+EYG+ID+++ P MP+ +G
Sbjct: 206 LLVSNSTGQPYDRVIRELSRNKWMDPKQAIEYGMIDKVLTTP-----MPKLPSG 254
>gi|427730534|ref|YP_007076771.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
gi|427366453|gb|AFY49174.1| protease subunit of ATP-dependent protease [Nostoc sp. PCC 7524]
Length = 197
Score = 214 bits (545), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 132/193 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + T QP KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRSQLNQIYANNTSQPLAKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVI 193
>gi|75907528|ref|YP_321824.1| ATP-dependent Clp protease proteolytic subunit [Anabaena variabilis
ATCC 29413]
gi|115311345|sp|Q3MDK7.1|CLPP2_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|75701253|gb|ABA20929.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 197
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 132/193 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + T QP KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNQIYANNTNQPLAKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVI 193
>gi|414079205|ref|YP_007000629.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972484|gb|AFW96572.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 197
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 132/193 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + T QP KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRSQLNQIYADNTTQPLSKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVI 193
>gi|334118044|ref|ZP_08492134.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333460029|gb|EGK88639.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 197
Score = 214 bits (544), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 136/193 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG QW+++++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYKMPGGYDTQWINIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSEDSG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG V+ +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIILYINSPGGMVSAGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI+ EA E+LR+R + ++ TG+P EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIQIEAKEILRLRHELNNIYAKNTGKPIEKIEKDMDRDYFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVI 193
>gi|428317797|ref|YP_007115679.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428241477|gb|AFZ07263.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 197
Score = 213 bits (541), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 136/193 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG QW+++++ LYRER+IF+G++ID+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYKMPGGYDTQWINIYDRLYRERIIFLGRDIDDEIANQIIAVMLYLDSEDSG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG V+ +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIILYINSPGGMVSAGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI+ EA E+LR+R + ++ TG+P EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIQIEAKEILRLRHELNNIYAKNTGKPIEKIEKDMDRDYFMSA 180
Query: 248 QEALEYGLIDRII 260
+EA EYGLIDR+I
Sbjct: 181 EEAREYGLIDRVI 193
>gi|427721125|ref|YP_007069119.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427353561|gb|AFY36285.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 197
Score = 211 bits (536), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 105/193 (54%), Positives = 131/193 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G++ID+E +NQI+A MLYLDS D
Sbjct: 1 MPIGIPKVPYRMPGGQFTDWISIYDRLYRERIIFLGRDIDDEIANQIIAVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGLAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + KTGQ KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNGIYAEKTGQTIAKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
EA EYGLIDR+I
Sbjct: 181 AEAKEYGLIDRVI 193
>gi|159467461|ref|XP_001691910.1| non-catalytic subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158278637|gb|EDP04400.1| non-catalytic subunit of chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 282
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 110/260 (42%), Positives = 161/260 (61%), Gaps = 8/260 (3%)
Query: 11 QPSLSCNLKLFSGLKI---QSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAM 67
+PS + + SG I + +V G P F+ K + + R+ P R M
Sbjct: 7 RPSRATTKTMASGAYIGVKPAANVVGKKSPQ---GFWQVTTKQISAAKRSGAPKRKVTTM 63
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ PKVL R PG+ +WVDLW A ++V+FI + I E+ +N ++A LYLDS+D
Sbjct: 64 MPVSVPKVLCRPPGQRQSEWVDLWEAYTYQKVVFIKEAITEDVANNMIALTLYLDSLDQ- 122
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLL-AGGEKGNRSAMP 186
KR+Y ++N PGGDV PTLA+YDTMQ ++S T C G + GFLL AGGEKG R AMP
Sbjct: 123 KRIYYWLNVPGGDVVPTLALYDTMQYVRSKTATVCYGLCLGMGGFLLTAGGEKGYRFAMP 182
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
S + + P+GA+RGQA ++ E+ EL+R+RDY+ S TGQP++++ ++LSR K
Sbjct: 183 HSILMMHHPSGASRGQASEMHIESRELVRMRDYLSLLTSNATGQPYDRVIRELSRNKWMD 242
Query: 247 SQEALEYGLIDRIIRPPRIK 266
++A+EYG+ID+++ P K
Sbjct: 243 PKQAIEYGMIDKVLTTPMPK 262
>gi|108773366|ref|YP_635828.1| ATP-dependent Clp protease proteolytic subunit [Oltmannsiellopsis
viridis]
gi|122195154|sp|Q20F17.1|CLPP_OLTVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|82541948|gb|ABB81989.1| proteolytic subunit 2 of clp protease [Oltmannsiellopsis viridis]
Length = 195
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 142/192 (73%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ + S
Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YDTM +K+ V T CVG A +A F+LAGG +G R A+P
Sbjct: 61 KDLYIYINSPGGSVTCGIAVYDTMNYIKADVTTICVGTAASMASFVLAGGTQGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G +RGQA ++ +E++E++R+R + K +++TGQP +I++DL R + +
Sbjct: 121 SRIMIHQPEGGSRGQASEVLSESEEVMRIRRQVGKIYAQRTGQPLRRISRDLDRDQFLSA 180
Query: 248 QEALEYGLIDRI 259
+EA +YG++D++
Sbjct: 181 REAKDYGIVDQV 192
>gi|186681465|ref|YP_001864661.1| ATP-dependent Clp protease proteolytic subunit [Nostoc punctiforme
PCC 73102]
gi|186463917|gb|ACC79718.1| peptidase S14, ClpP [Nostoc punctiforme PCC 73102]
Length = 203
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 132/193 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G++ID+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDIDDEIANQIIAVMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + KTGQ KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREILRIRHQLNGIYADKTGQTIAKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
+EA EYGLIDR+I
Sbjct: 181 EEAKEYGLIDRVI 193
>gi|434402516|ref|YP_007145401.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
gi|428256771|gb|AFZ22721.1| protease subunit of ATP-dependent protease [Cylindrospermum
stagnale PCC 7417]
Length = 197
Score = 209 bits (533), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 104/193 (53%), Positives = 132/193 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G++ID+E +NQI+A +LYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDIDDEIANQIIAVLLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIFLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + TGQ KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNQIYADNTGQIITKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVI 193
>gi|323448447|gb|EGB04345.1| hypothetical protein AURANDRAFT_32730 [Aureococcus anophagefferens]
Length = 197
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 135/193 (69%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG S W+D++N LYRER+IF+GQ ID+E +NQI+ MLYLDS D +
Sbjct: 1 MPIGVPKVAYRVPGAPSADWIDIYNRLYRERIIFLGQEIDDELANQIIGVMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V LAI+DTM +KS V T +G + +A FLL GG KG+R A+P
Sbjct: 61 KPIYLYINCPGGSVIAGLAIFDTMNHIKSKVVTINIGLSASMASFLLCGGTKGSRLALPN 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SR+ + P G A+GQA+DI+ EA +++R+++ + K + TGQ ++I DL R +
Sbjct: 121 SRVMIHQPMGGAQGQAEDIKVEAAQIIRIKENLVKLYAMMTGQTQDQIILDLDRDNFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA +YG+ID++I
Sbjct: 181 QEACDYGIIDKVI 193
>gi|119512063|ref|ZP_01631157.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
gi|119463289|gb|EAW44232.1| ATP-dependent Clp protease proteolytic subunit [Nodularia spumigena
CCY9414]
Length = 197
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 131/193 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ LYRER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLYRERIIFLGRDVDDEIANQIIAVMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYLYINSPGGMVTSGMAIFDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + KTGQ KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNGIYAEKTGQDISKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
EA EYGLIDR+I
Sbjct: 181 AEAKEYGLIDRVI 193
>gi|411118653|ref|ZP_11391034.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712377|gb|EKQ69883.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 199
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 133/193 (68%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG G QW++++ L+RER+IF+ + +D+ +N I+A +LYLDS D S
Sbjct: 1 MPIGIPSVPYRLPGGGYEQWINIYERLFRERIIFLSEEVDDGIANAIVAYLLYLDSDDQS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIFDTMQHIKSEVVTICVGLAASMGAFLLAAGSKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G +RGQA DI EA E+LR+R + + L+ +TGQP EKI +D R +
Sbjct: 121 ARIMIHQPLGGSRGQATDIEIEAREILRIRQQLNEILAERTGQPLEKIERDTDRDYFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLID++I
Sbjct: 181 QEAKEYGLIDQVI 193
>gi|224179483|ref|YP_002601006.1| proteolytic subunit 2 of clp protease [Monomastix sp. OKE-1]
gi|217314526|gb|ACK36869.1| proteolytic subunit 2 of clp protease [Monomastix sp. OKE-1]
Length = 201
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 138/192 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QW+DL+N LYRERV+F+G ++D+E +NQ++ M+YL + D+S
Sbjct: 1 MPIGVPKVAFRLPGEPTPQWIDLYNRLYRERVLFLGSDLDDELANQLVGIMIYLSAEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
KR+++YIN PGG VT LA+YD M +++ V T C+G A +A F+LAGGE+G+R A+P
Sbjct: 61 KRIFIYINSPGGSVTCGLAVYDAMHHIQARVTTLCIGIAASMASFVLAGGERGHRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SR+ + P G ++GQA D+ EA+E++R+R I + + +TGQ I K + R + +
Sbjct: 121 SRVMIHQPQGGSQGQASDVTAEAEEVMRIRRQIGRIYAERTGQSLATIAKSMDRDRFMSA 180
Query: 248 QEALEYGLIDRI 259
+EA E+GL+D++
Sbjct: 181 KEAKEFGLVDQV 192
>gi|359457308|ref|ZP_09245871.1| ATP-dependent Clp protease proteolytic subunit [Acaryochloris sp.
CCMEE 5410]
Length = 198
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 130/193 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +WVD++ L +ER+IF+GQ + + +NQI+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRIPGSPYERWVDIYTRLSQERIIFLGQEVTDGLANQIVAFLLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPISIYINSPGGSVTAGLAIYDTMQHIKSEVATICVGLAASMGSFLLAAGSPGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G ARGQA DI EA E++RVR + + +TGQP EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGARGQASDIEIEAKEIIRVRRQLNDIYAARTGQPLEKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
EALEYGLID++I
Sbjct: 181 HEALEYGLIDQVI 193
>gi|224178037|ref|YP_002600892.1| proteolytic subunit 2 of clp protease [Pyramimonas parkeae]
gi|215882704|gb|ACJ71077.1| proteolytic subunit 2 of clp protease [Pyramimonas parkeae]
Length = 198
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 137/192 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE + QW+DL+N LYRERV+F+G ++D+E +NQ++ MLYL + D+S
Sbjct: 1 MPIGVPKVAYRLPGEPAPQWIDLYNRLYRERVLFLGSDLDDELANQLVGIMLYLSAEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
KR+Y+YIN PGG VT +A+YD MQ + + V T CVG A +A F+LAGGE+G+R A+
Sbjct: 61 KRLYIYINSPGGSVTCGIAVYDAMQHVNASVTTICVGIAASMASFVLAGGERGHRLALSH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G ++GQA ++ EA+E++R+R + + + +TGQ I +D+ R +
Sbjct: 121 ARIMIHQPQGGSQGQASEVTAEAEEVMRIRRQVGQIYAERTGQRLTTIARDMDRDRFMSG 180
Query: 248 QEALEYGLIDRI 259
+EA EYGL+D++
Sbjct: 181 REAKEYGLVDQV 192
>gi|323149170|ref|YP_004221999.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
gi|317467226|gb|ADV29847.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
Length = 195
Score = 207 bits (526), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 140/192 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + S
Sbjct: 1 MPIGVPKVPFRLPGEPTAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD+M +K+ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYIYINSPGGSVTCGIAVYDSMNYVKADVTTICVGTAASMASFVLAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ++GQA ++ +E+ E++R+R + K + +TGQP +I++D+ R + +
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESSEVMRIRRQVGKIYAERTGQPLSRISRDMDRDQFMSA 180
Query: 248 QEALEYGLIDRI 259
+EA EYGL+D++
Sbjct: 181 REAKEYGLVDQV 192
>gi|440684795|ref|YP_007159590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428681914|gb|AFZ60680.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 197
Score = 206 bits (524), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 130/193 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG W+ +++ L RER+IF+G+++D+E +NQI+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRMPGGQYTDWISIYDRLSRERIIFLGRDVDDEIANQIIAIMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIFLYINSPGGMVTSGLAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGTKGKRMALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E++R+R + + TGQ KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREIIRIRHQLNQIYVDNTGQTLAKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVI 193
>gi|158335482|ref|YP_001516654.1| ATP-dependent Clp protease proteolytic subunit [Acaryochloris
marina MBIC11017]
gi|158305723|gb|ABW27340.1| ATP-dependent Clp protease, proteolytic subunit ClpP, putative
[Acaryochloris marina MBIC11017]
Length = 198
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/193 (52%), Positives = 129/193 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +WVD++ L +ER+IF+GQ + + +NQI+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRIPGSPYERWVDIYTRLSQERIIFLGQEVTDGLANQIVAFLLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPISIYINSPGGSVTAGLAIYDTMQHIKSEVATICVGLAASMGSFLLAAGSPGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G ARGQA DI EA E++RVR + + +T QP EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGARGQASDIEIEAKEIIRVRRQLNDIYAARTAQPLEKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
EALEYGLID++I
Sbjct: 181 HEALEYGLIDQVI 193
>gi|428774097|ref|YP_007165885.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688376|gb|AFZ48236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 199
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 136/195 (69%), Gaps = 2/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V Y+ PG+ WV++++ LYRER+IF+G+ +++ +NQI+A MLYLDS D++
Sbjct: 1 MPIGVPRVPYQMPGQPYSDWVNIYDRLYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQHIKSEVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G +G QA DI EA E+LR+++ + + ++ TGQ EKI KD R
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIEIEAKEILRIKNDLNRIMAFHTGQTIEKIEKDTDRDYFM 180
Query: 246 GSQEALEYGLIDRII 260
+QEALEYGLID++I
Sbjct: 181 SAQEALEYGLIDKVI 195
>gi|428217035|ref|YP_007101500.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427988817|gb|AFY69072.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 199
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 132/194 (68%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YR PG W+ +++ LYRER+IF+GQ +D+E +N+I+A MLYLDS +
Sbjct: 1 MPIGVPRVPYRMPGSQYTDWISIYDRLYRERIIFLGQEVDDEIANRIVAVMLYLDSEEPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G G R A+P
Sbjct: 61 KDIRLYINSPGGSVTAGLAIYDTMQHIKSDVSTICVGLAASMGSFLLMAGTPGKRYALPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P+ G RGQA DI EA E+LR++D + +E + +TGQP EKI +D+ R
Sbjct: 121 SRIMMHQPSMGGTRGQATDIEIEAKEILRIKDLLNREYATRTGQPLEKIERDVDRDFFMS 180
Query: 247 SQEALEYGLIDRII 260
+ EA +YGL+DR+I
Sbjct: 181 AAEAKDYGLLDRVI 194
>gi|303289849|ref|XP_003064212.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454528|gb|EEH51834.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 215
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 142/208 (68%), Gaps = 17/208 (8%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V Y+TP E SWQWVD+WN LYRER+++IGQ ID+E NQ++ATMLYLD+ D S
Sbjct: 1 MPIGVPRVPYKTPNENSWQWVDIWNCLYRERIVWIGQQIDDELGNQLVATMLYLDTTDKS 60
Query: 128 -KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF--------AYHLA------GF 172
K +Y+YIN GG+V PT+AI DTM+ +KS VG CVGF A++L
Sbjct: 61 GKDIYLYINSEGGEVVPTMAILDTMKHIKSDVG--CVGFGSARAMGGAFYLTLVPIRPRM 118
Query: 173 LLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 232
LLA G KG R+A+P + I L P+GAARG A DI NE ELL++R I ++ TG+P
Sbjct: 119 LLACGAKGKRAALPNTCIMLHHPSGAARGAASDINNEGRELLKIRAKINDMIAGATGRPA 178
Query: 233 EKITKDLSRIKRFGSQEALEYGLIDRII 260
+I +++ R +++AL+YG+ID+++
Sbjct: 179 SEIQENIRRDFHLTAEKALDYGVIDKVL 206
>gi|298491711|ref|YP_003721888.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233629|gb|ADI64765.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 197
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 130/194 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+DL + L+RER+IF+ + +D+ +N I+A LYLDS D +
Sbjct: 1 MPIGIPKVPYRLPGSNYEQWIDLEDRLFRERIIFLTEEVDDGIANAIVAYFLYLDSDDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G +G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVVTICVGLAASMGSFLLATGTQGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI+ EA E+LR+R + + + TGQ KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIQIEAQEILRIRSQLNQIYADNTGQALAKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRIIR 261
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVIE 194
>gi|162134289|gb|ABX82591.1| proteolytic subunit 2 of clp protease [Trebouxia aggregata]
Length = 224
Score = 205 bits (521), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 92/192 (47%), Positives = 141/192 (73%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ + S
Sbjct: 28 MPIGVPKVPFRLPGEPAAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKS 87
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT +A+YDTM +K+ V T CVG A +A F+LAGG++G R A+P
Sbjct: 88 KGLFIYINSPGGSVTCGIAVYDTMNYVKADVTTICVGTAASMASFVLAGGDRGKRLALPH 147
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ++GQA +I +E++E++R+R + K + +TGQ +I++D+ R + +
Sbjct: 148 SRIMIHQPEGGSQGQASEILSESEEVMRIRRQVGKIYAERTGQSLSRISRDMDRDQFMSA 207
Query: 248 QEALEYGLIDRI 259
+EA EYGL+D++
Sbjct: 208 REAKEYGLVDQV 219
>gi|443478434|ref|ZP_21068189.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
gi|443016286|gb|ELS30982.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
Length = 197
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 133/197 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YR PG+ QW++++ L ER++F+ + + +N ++A MLY DS D +
Sbjct: 1 MPIGVPRVPYRYPGDSYTQWINIYERLSLERIMFMSGEVTDGMANSMIARMLYFDSEDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG V+ LAI+DTMQ +K+ V T CVG A + +LL G KG R A+P
Sbjct: 61 KDIYMYINSPGGSVSAGLAIFDTMQHIKADVTTICVGLAASMGSYLLMAGAKGKRYALPN 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P+G RGQA DI EA E++R+R + E +++TGQP EKI +D++R S
Sbjct: 121 ARIMIHQPSGGTRGQASDIEIEAREIIRIRQKLNSEYAKRTGQPLEKIERDMNRDYYMSS 180
Query: 248 QEALEYGLIDRIIRPPR 264
QEALEYGLIDR++ P+
Sbjct: 181 QEALEYGLIDRVLDSPQ 197
>gi|282900572|ref|ZP_06308514.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281194372|gb|EFA69327.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 194
Score = 204 bits (520), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 130/194 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+DL + L+RER+IF+ + +D+ +N I+A +LYLDS D +
Sbjct: 1 MPIGIPKVPYRLPGSNYEQWIDLEDRLFRERIIFLTEEVDDGIANAIVAYLLYLDSDDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTIQYIKSEVVTICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + TGQ KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNQIYADNTGQVLSKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRIIR 261
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVIE 194
>gi|282896316|ref|ZP_06304338.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281198812|gb|EFA73691.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 194
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 130/194 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+DL + L+RER+IF+ + +D+ +N I+A +LYLDS D +
Sbjct: 1 MPIGIPKVPYRLPGSNYEQWIDLEDRLFRERIIFLTEEVDDGIANAIVAYLLYLDSDDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTIQYIKSEVITICVGLAASMGSFLLAAGAKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + + TGQ KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQASDIEIEAREILRIRHQLNQIYADNTGQVLSKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRIIR 261
QEA EYGLIDR+I
Sbjct: 181 QEAKEYGLIDRVIE 194
>gi|223369879|gb|ACM88806.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chlorella sorokiniana]
Length = 201
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 140/192 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPAAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYIYINSPGGSVTCGIAVYDAMNYIKSDVTTICVGTAASMASFILAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ++GQA ++ +E++E++R+R + + + +TGQP +I++D+ R + +
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESEEVMRIRRQVGRIYAERTGQPLSRISRDMDRDQFLSA 180
Query: 248 QEALEYGLIDRI 259
+EA +YGL+D++
Sbjct: 181 REAKDYGLVDQV 192
>gi|7524837|ref|NP_045839.1| ATP-dependent Clp protease proteolytic subunit [Chlorella vulgaris]
gi|3023501|sp|P56317.1|CLPP_CHLVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2224431|dbj|BAA57915.1| ATP-dependent Clp protease proteolytic subunit [Chlorella vulgaris]
Length = 201
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 138/192 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ++GQA ++ +E+ E++R+R + + S +TGQ ++++D+ R + +
Sbjct: 121 SRIMVHQPEGGSQGQASEVLSESQEVMRIRRQVGRIYSERTGQTLSRVSRDMDRDQFLSA 180
Query: 248 QEALEYGLIDRI 259
+EA EYGL+D++
Sbjct: 181 REAKEYGLVDQV 192
>gi|428771384|ref|YP_007163174.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685663|gb|AFZ55130.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 199
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V Y+ PG+ WV++++ LYRER+IF+G+ +++ +NQI+A MLYLDS D+S
Sbjct: 1 MPIGVPRVPYQLPGQPYSDWVNIYDRLYRERIIFLGRGVNDSLANQIIAVMLYLDSEDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G +G QA DI EA E+LR++ + + ++ TGQP EKI KD R
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIEIEAKEILRIKHDLNEMMALHTGQPIEKIEKDTDRDYFM 180
Query: 246 GSQEALEYGLIDRII 260
+ EA EYGLID++I
Sbjct: 181 SAAEAKEYGLIDKVI 195
>gi|409052506|ref|YP_006666464.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Trebouxiophyceae sp. MX-AZ01]
gi|402746124|gb|AFQ93819.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Trebouxiophyceae sp. MX-AZ01]
Length = 195
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 139/192 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + S
Sbjct: 1 MPIGVPKVPFRLPGEPTAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD+M +K+ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYVYINSPGGSVTCGIAVYDSMNYVKADVTTICVGTAASMASFVLAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ++GQA ++ +E+ E++R+R + K + +TGQ +I++D+ R + +
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESSEVMRIRRQVGKIYAERTGQSLSRISRDMDRDQFMSA 180
Query: 248 QEALEYGLIDRI 259
+EA EYGL+D++
Sbjct: 181 REAKEYGLVDQV 192
>gi|428299969|ref|YP_007138275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428236513|gb|AFZ02303.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 198
Score = 204 bits (518), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 129/193 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+D++N L+ ER+IF+G+ +D++ +N+I+A MLYLDS D
Sbjct: 1 MPIGVPKVPYRLPGGQQTQWIDIYNRLFLERIIFLGREVDDDIANKIIAEMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG V+ LAI+DTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KDIILYINSPGGSVSAGLAIFDTMQHIKSDVATICVGLAASMGSFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E++R+R + + TGQ +KI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAREIIRIRHQLNNIYANTTGQTLQKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
EA EYGL+DR+I
Sbjct: 181 AEAKEYGLVDRVI 193
>gi|108796955|ref|YP_636255.1| ATP-dependent Clp protease proteolytic subunit [Pseudendoclonium
akinetum]
gi|122217843|sp|Q3ZJ12.1|CLPP_PSEAK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56159653|gb|AAV80677.1| proteolytic subunit 2 of clp protease [Pseudendoclonium akinetum]
Length = 198
Score = 203 bits (516), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 93/192 (48%), Positives = 137/192 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR G +WVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ D S
Sbjct: 1 MPIGVPKVPYRLAGNEVAEWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEDKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT + ++D M +KS V T CVG A +A F+LAGG KG R A+P
Sbjct: 61 KGIYVYINSPGGSVTCGVGVFDAMNYIKSDVTTICVGTAASMASFVLAGGRKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ++GQA + +E++E+LR+RD + + S +TGQ E+I++D++R + +
Sbjct: 121 SRIMIHQPEGGSQGQASVVLSESEEVLRIRDEVAQIYSERTGQTLERISRDMNRDQFMSA 180
Query: 248 QEALEYGLIDRI 259
+EA +YGL+D+I
Sbjct: 181 REAKDYGLVDQI 192
>gi|443324640|ref|ZP_21053379.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
gi|442795739|gb|ELS05087.1| protease subunit of ATP-dependent protease [Xenococcus sp. PCC
7305]
Length = 199
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 133/195 (68%), Gaps = 2/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ W+ +++ LYRER+IF+G+ +++ +NQI+A MLYLDS D S
Sbjct: 1 MPIGIPKVPYQMPGQTYSDWISIYDRLYRERIIFLGRGVNDGIANQIIAIMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLLAGG KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMRHIKSEVVTICVGLAASMGAFLLAGGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G +G QA DI EA+E+LR+RD + + L+ TG+ KI KD R
Sbjct: 121 SRIMIHQPLGGVQGRRQATDIEIEANEILRIRDQLNQMLADNTGKDIAKIAKDTDRDYFM 180
Query: 246 GSQEALEYGLIDRII 260
+ EA EYGLID++I
Sbjct: 181 SAAEAKEYGLIDQVI 195
>gi|434399879|ref|YP_007133883.1| ATP-dependent Clp protease proteolytic subunit ClpP [Stanieria
cyanosphaera PCC 7437]
gi|428270976|gb|AFZ36917.1| ATP-dependent Clp protease proteolytic subunit ClpP [Stanieria
cyanosphaera PCC 7437]
Length = 199
Score = 203 bits (516), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/196 (51%), Positives = 133/196 (67%), Gaps = 2/196 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ W+ +++ LYRER+IF+G+ I++ +NQI+A MLYLDS D
Sbjct: 1 MPIGIPKVPYQMPGQPYSDWISIYDRLYRERIIFLGRGINDGIANQIIAIMLYLDSDDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLLAGG KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKHIKSDVVTICVGLAASMGAFLLAGGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G +G QA DI EA E+LR+RD + + ++ TGQP KI KD R
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIEIEAKEILRIRDQLNQMMADNTGQPLAKIEKDTDRDYFM 180
Query: 246 GSQEALEYGLIDRIIR 261
++EA EYG+ID++I
Sbjct: 181 SAEEAKEYGIIDKVIE 196
>gi|409990518|ref|ZP_11273881.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
gi|291569210|dbj|BAI91482.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938615|gb|EKN79916.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
Length = 198
Score = 202 bits (515), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 99/194 (51%), Positives = 128/194 (65%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG QW+ ++ L+RER+IF+ + +D+ +N I+A MLYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSTYEQWIGIYERLFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVVTICVGMAASMGAFLLAAGTKGKRLALPN 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G RGQA DI EA E+LR+R + + L+ ++GQ EKI KD R +
Sbjct: 121 ARIMIHQPLGGTRGQATDIEIEAKEILRIRKVLNEMLAERSGQTLEKIEKDTDRDYFMSA 180
Query: 248 QEALEYGLIDRIIR 261
EA EYGLID++I
Sbjct: 181 AEAHEYGLIDQVIE 194
>gi|331268128|ref|YP_004347777.1| ATP-dependent Clp protease proteolytic subunit [Chlorella
variabilis]
gi|325296305|gb|ADZ05025.1| ATP-dependent Clp protease proteolytic subunit [Chlorella
variabilis]
Length = 201
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 139/192 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ Q +D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPAAQWVDLYNRLYRERVLFLCQELDDELANQLIGIMLYLNAEEQN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGDRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ++GQA ++ +E++E++R+R + + S +TGQ +I++D+ R + +
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESEEVMRIRRQVGRIYSERTGQALSRISRDMDRDQFLSA 180
Query: 248 QEALEYGLIDRI 259
+EA +YGL+D++
Sbjct: 181 REAKDYGLVDQV 192
>gi|428215428|ref|YP_007088572.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
gi|428003809|gb|AFY84652.1| protease subunit of ATP-dependent protease [Oscillatoria acuminata
PCC 6304]
Length = 197
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 129/193 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ QW+DL LY+ER+IF+G +D+E +N+I+A MLYLDS +
Sbjct: 1 MPIGYPKVPYRLPGDTYTQWIDLETRLYQERIIFLGSEVDDELANKIIAIMLYLDSEEAG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G R A+P
Sbjct: 61 KDIILYINSPGGSVTSGMAIYDTMQHIKSDVVTICVGLAASMGSFLLAAGAPNKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E++R+R + + + +T Q EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGVRGQASDIEIEAREIIRIRRQLNQIYANRTNQSLEKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRII 260
QEA +YGLIDR+I
Sbjct: 181 QEAKDYGLIDRVI 193
>gi|443315108|ref|ZP_21044618.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
gi|442785290|gb|ELR95120.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
6406]
Length = 206
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 129/193 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG QW+ ++ L+RER+IF+ + + + +N I+A +LYLDS D++
Sbjct: 1 MPIGVPSVAYRLPGSPYEQWISIYERLFRERIIFLSEEVTDSIANAIVAYLLYLDSEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +K+ V T CVG A + FLLA G KG R+A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKAEVITICVGLAASMGAFLLAAGTKGKRTALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P ARGQA DI EA E+LRV+ + K L+ +TG+ E+I +D R +
Sbjct: 121 ARIMIHQPLSGARGQATDIEIEAKEVLRVKHTLNKMLAERTGKTLEEIERDTDRDYFLSA 180
Query: 248 QEALEYGLIDRII 260
QEA YGLIDR+I
Sbjct: 181 QEAARYGLIDRVI 193
>gi|428776590|ref|YP_007168377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428690869|gb|AFZ44163.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 200
Score = 202 bits (515), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/195 (50%), Positives = 134/195 (68%), Gaps = 2/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V Y+ PG+ WV++++ LYRER+IF+G+ I++ +NQ++A MLYLDS D S
Sbjct: 1 MPIGVPRVPYQMPGQPYSDWVNIYDRLYRERIIFLGRGINDSLANQVIAVMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V+ +AIYDTMQ +KS V T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVSAGMAIYDTMQHIKSEVVTICVGIAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G +G QA DI EA E+LR+R+ + K ++ TGQ E+I KD R
Sbjct: 121 SRIMIHQPMGGTQGRRQATDIEIEAREILRIREQLDKIMAENTGQTIERIKKDTDRDYFM 180
Query: 246 GSQEALEYGLIDRII 260
++EA EYG+IDR+I
Sbjct: 181 SAEEAKEYGIIDRVI 195
>gi|376003777|ref|ZP_09781580.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423066153|ref|ZP_17054943.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
gi|375327808|emb|CCE17333.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406712195|gb|EKD07384.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis C1]
Length = 198
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/193 (50%), Positives = 128/193 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG QW+ ++ L+RER+IF+ + +D+ +N I+A MLYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSTYEQWISIYERLFRERIIFLSEEVDDGIANAIVAYMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ ++S V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIRSDVVTICVGMAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G RGQA DI EA E+LR+R + + L+ ++GQ EKI KD R +
Sbjct: 121 ARIMIHQPLGGTRGQATDIEIEAKEILRIRKVLNEMLAERSGQTLEKIEKDTDRDYFMSA 180
Query: 248 QEALEYGLIDRII 260
EA EYGLID++I
Sbjct: 181 AEAHEYGLIDQVI 193
>gi|170077811|ref|YP_001734449.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
PCC 7002]
gi|169885480|gb|ACA99193.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 199
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 134/196 (68%), Gaps = 2/196 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ W+++++ LYRER+IF+G+ +++ +NQI+A MLYLDS D S
Sbjct: 1 MPIGVPKVPYQMPGQPYSDWINIYDRLYRERIIFLGRGVNDALANQIIAIMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G +G QA DI EA E++R++ + + ++ TGQ EKI KD R
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIDIEAKEIIRIKHQLNELMAAHTGQSIEKIEKDTDRDYFM 180
Query: 246 GSQEALEYGLIDRIIR 261
+QEALEYGLID++I
Sbjct: 181 SAQEALEYGLIDKVIE 196
>gi|443323686|ref|ZP_21052690.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
gi|442786668|gb|ELR96397.1| protease subunit of ATP-dependent protease [Gloeocapsa sp. PCC
73106]
Length = 200
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 131/195 (67%), Gaps = 2/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ W+DL+N LYRER+IF+G+ +++ +NQI++ MLYLDS D
Sbjct: 1 MPIGVPKVPYRLPGQPYSDWIDLYNRLYRERIIFLGRGVNDSLANQIISVMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYIKSDVVTICVGLAASMGAFLLGAGTPGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G +G QA DI EA+E+LR+R+ + + +S T QP EKI +D R
Sbjct: 121 SRIMIHQPLGGIQGRRQATDIEIEANEILRIREQLNQIMSHHTHQPLEKIERDTDRDFFM 180
Query: 246 GSQEALEYGLIDRII 260
++EA YGLID++I
Sbjct: 181 SAEEAKAYGLIDQVI 195
>gi|385153245|gb|AFI43874.1| clp protease proteolytic subunit (chloroplast) [Hemichloris
antarctica]
gi|385153249|gb|AFI43877.1| clp protease proteolytic subunit (chloroplast) [Hemichloris
antarctica]
gi|385153253|gb|AFI43880.1| clp protease proteolytic subunit (chloroplast) [Hemichloris
antarctica]
Length = 203
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 139/192 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYR+RV+F+ Q +D+E +NQ++ MLYL++ ++S
Sbjct: 1 MPIGVPKVPFRMPGEPAAQWVDLYNRLYRDRVLFLCQELDDELANQLIGIMLYLNAEEES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT +A+YD M +++ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLFLYINSPGGSVTCGIAVYDAMHYVEADVTTICVGTAASMASFVLAGGDRGRRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G ++GQA D+ +E+ E+LR+R + + + +TGQP +I++D+ R + +
Sbjct: 121 ARIMIHQPEGGSQGQASDVVSESSEVLRIRHQVGRIYAERTGQPLSRISRDMDRDQFMSA 180
Query: 248 QEALEYGLIDRI 259
+E EYGL+D++
Sbjct: 181 REGKEYGLVDQV 192
>gi|385153257|gb|AFI43883.1| clp protease proteolytic subunit (chloroplast) [Elliptochloris
reniformis]
Length = 203
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 139/192 (72%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYR+RV+F+ Q +D+E +NQ++ MLYL++ ++S
Sbjct: 1 MPIGVPKVPFRMPGEPAAQWVDLYNRLYRDRVLFLCQELDDELANQLIGIMLYLNAEEES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT +A+YD M +++ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KGLFLYINSPGGSVTCGIAVYDAMHYVEADVTTICVGTAASMASFVLAGGDRGRRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G ++GQA D+ +E+ E+LR+R + + + +TGQP +I++D+ R + +
Sbjct: 121 ARIMIHQPEGGSQGQASDVVSESSEVLRIRHQVGQIYAERTGQPLSRISRDMDRDQFMSA 180
Query: 248 QEALEYGLIDRI 259
+E EYGL+D++
Sbjct: 181 REGKEYGLVDQV 192
>gi|32364338|gb|AAP80272.1| ATP-dependent Clp protease proteolytic subunit [Malus x domestica]
Length = 120
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 94/120 (78%), Positives = 107/120 (89%)
Query: 160 THCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDY 219
THCVG+AY+LA FLL GEKGNR AMPLSRIAL SPAGAARGQADDI+NEA+ELLR+RDY
Sbjct: 1 THCVGYAYNLAAFLLTAGEKGNRFAMPLSRIALQSPAGAARGQADDIQNEANELLRIRDY 60
Query: 220 IFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKEDMPRKDAGTGLG 279
+F EL+ KTGQP EKI KDLSR+KRF +QEALEYGLIDR++RPPRIK D P KD+G+GLG
Sbjct: 61 LFNELAMKTGQPVEKINKDLSRMKRFNAQEALEYGLIDRVVRPPRIKADAPPKDSGSGLG 120
>gi|427702649|ref|YP_007045871.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
gi|427345817|gb|AFY28530.1| protease subunit of ATP-dependent protease [Cyanobium gracile PCC
6307]
Length = 203
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/197 (51%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVTDGIANSLVAQMLYLDSDDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ++ QA DI EA E+LR++D + + L+ GQP EK+TKD R
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNQSLAGMCGQPLEKVTKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA EYGLIDR+I P
Sbjct: 181 AAEAKEYGLIDRVIAHP 197
>gi|260780695|ref|YP_003227081.1| ATP-dependent Clp protease proteolytic subunit [Bryopsis hypnoides]
gi|260176773|gb|ACX33782.1| ATP-dependent Clp protease proteolytic subunit [Bryopsis hypnoides]
Length = 199
Score = 201 bits (512), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 137/192 (71%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S QWVDL+N LYRERV+F+ Q++D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLYNRLYRERVLFLCQDLDDELANQLIGIMLYLNAEEKA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG +G R A P
Sbjct: 61 KDLYIYINSPGGSVTCGIAVYDIMNYIKSDVTTICVGTAASMASFILAGGCRGKRIAFPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ++GQA ++ +E++E++R+R + + + +TGQ +I++D+ R + +
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESEEVMRIRRQVGQIYAERTGQTLSRISRDMDRDQFLSA 180
Query: 248 QEALEYGLIDRI 259
QEA +YGL+D +
Sbjct: 181 QEAKKYGLVDHL 192
>gi|427724371|ref|YP_007071648.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356091|gb|AFY38814.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 200
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/196 (49%), Positives = 134/196 (68%), Gaps = 2/196 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ W+++++ LYRER+IF+G+ +++ +NQI+A MLYLDS D S
Sbjct: 1 MPIGVPKVPYQMPGQPYSDWINIYDRLYRERIIFLGRGVNDALANQIIAIMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKHIKSEVVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+RI + P G +G QA DI EA E+LR++ + + ++ +GQ E+I KD R
Sbjct: 121 ARIMIHQPLGGTQGRRQATDIEIEAKEILRIKQQLNELMADHSGQTVEQIEKDTDRDNFM 180
Query: 246 GSQEALEYGLIDRIIR 261
+QEALEYGLID++I
Sbjct: 181 SAQEALEYGLIDKVIE 196
>gi|113475006|ref|YP_721067.1| ATP-dependent Clp protease proteolytic subunit [Trichodesmium
erythraeum IMS101]
gi|110166054|gb|ABG50594.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 196
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/193 (51%), Positives = 130/193 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A MLYLDS D +
Sbjct: 1 MPIGIPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVTDGLANRIVAYMLYLDSDDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +K+ V T C+G A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYIKADVITICLGLAASMGSFLLAAGTKGKRLALPN 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G RGQA DI EA+E+LRVR + L+ +TGQ EKI KD R +
Sbjct: 121 SRIMIHQPMGGTRGQATDIEIEANEILRVRSELNNMLAERTGQSLEKIEKDTDRDYYMSA 180
Query: 248 QEALEYGLIDRII 260
+EA EYGLID++I
Sbjct: 181 EEAKEYGLIDQVI 193
>gi|56751582|ref|YP_172283.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81301346|ref|YP_401554.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|18203213|sp|Q9L4P3.1|CLPP3_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|67460443|sp|Q5N1Q7.1|CLPP2_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|7106112|emb|CAB75988.1| ATP-dependent Clp protease third proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|56686541|dbj|BAD79763.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81170227|gb|ABB58567.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 199
Score = 201 bits (510), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 129/194 (66%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++N L ER+IF+GQ + + +N I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSSFERWIDIYNRLAMERIIFLGQEVTDGLANSIVAQLLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KSPV T C+G A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSPVITICLGLAASMGAFLLCAGSKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G R QA DI EA E+LR++ + + ++ +TGQP EKI KD R
Sbjct: 121 SRIMIHQPLGGTGRRQASDIEIEAKEILRIKKLLNQIMADRTGQPLEKIEKDTDRDYFMS 180
Query: 247 SQEALEYGLIDRII 260
++EA EYGLID++I
Sbjct: 181 AEEAREYGLIDQVI 194
>gi|427736765|ref|YP_007056309.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
gi|427371806|gb|AFY55762.1| protease subunit of ATP-dependent protease [Rivularia sp. PCC 7116]
Length = 198
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 130/194 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V Y+ PGE QWV+++ L R+R+IF+G ++++ +N+I+A MLYLDS D
Sbjct: 1 MPIGYPSVPYKLPGEQYTQWVNIYTRLARDRIIFLGDEVNDQIANEIIAIMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT LAIYDTMQ +KS V T C+G A + FLL GG KG R A+P
Sbjct: 61 KDIFLYINSPGGVVTSGLAIYDTMQHIKSDVVTICLGLAASMGSFLLGGGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G RGQA DI EA E+LR+R + + TGQ EKI KD+ R +
Sbjct: 121 SRIMIHQPSGGTRGQATDIEIEAKEILRIRHQLNGIYANNTGQSLEKIEKDMDRDFFMSA 180
Query: 248 QEALEYGLIDRIIR 261
++A EYGLID++I
Sbjct: 181 EQAKEYGLIDKVIE 194
>gi|37523335|ref|NP_926712.1| ATP-dependent Clp protease proteolytic subunit [Gloeobacter
violaceus PCC 7421]
gi|60389714|sp|Q7NEW2.1|CLPP1_GLOVI RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|35214339|dbj|BAC91707.1| clpP [Gloeobacter violaceus PCC 7421]
Length = 197
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 135/194 (69%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG G QW+D++N L +R+IF+G+ +D+E +N I+A+MLYLDS D
Sbjct: 1 MPIGIPKVPYRLPG-GQSQWIDIFNRLALDRIIFLGREVDDEIANAIIASMLYLDSEDPE 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG V+ LAIYDTMQ +++ V T CVG A + FLL G KG R+++P
Sbjct: 60 KDIFLYINSPGGSVSAGLAIYDTMQHVRADVATMCVGLAASMGSFLLTAGAKGKRTSLPH 119
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G A+GQA DI +A E+L +D + + LS +TGQP E+I +D R +
Sbjct: 120 SRIMIHQPLGGAQGQATDIGIQAKEILYTKDRLNQILSERTGQPLERIERDTDRDFFMSA 179
Query: 248 QEALEYGLIDRIIR 261
++A +YGLID++++
Sbjct: 180 EDAKQYGLIDQVVQ 193
>gi|78212384|ref|YP_381163.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9605]
gi|124013824|sp|Q3ALC4.1|CLPP3_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|78196843|gb|ABB34608.1| Endopeptidase Clp [Synechococcus sp. CC9605]
Length = 200
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G +R QA DI EA E+LR+++ + + LS +GQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA EYGLIDR+I P
Sbjct: 181 AEEAKEYGLIDRVISHP 197
>gi|300869048|ref|ZP_07113650.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
gi|300332959|emb|CBN58844.1| ATP-dependent Clp protease proteolytic subunit [Oscillatoria sp.
PCC 6506]
Length = 197
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 131/193 (67%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D +
Sbjct: 1 MPIGVPSVPYRLPGSTYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAYLLYLDSDDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGG VT +AI+DTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIFIYINSPGGSVTAGMAIFDTMQYIKSEVVTMCVGQAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G RGQA DI+ EA E+LRVR + + L+++TGQ EKI KD R +
Sbjct: 121 ARIMIHQPLGGTRGQATDIQIEAKEILRVRQQLNEMLAKRTGQTLEKIQKDTDRDYFMSA 180
Query: 248 QEALEYGLIDRII 260
EA EYGLID++I
Sbjct: 181 AEAKEYGLIDQVI 193
>gi|354567563|ref|ZP_08986732.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353542835|gb|EHC12296.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 200
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/195 (51%), Positives = 131/195 (67%), Gaps = 2/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PGE QW+ +++ L R+R+IF+G+ ID++ +N+I+A MLYLDS D
Sbjct: 1 MPIGYPSVPYRLPGEQFTQWIHIYSRLARDRIIFLGEEIDDKLANEIIAIMLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG + LA+YDTMQ +KS V T CVG A + FLLAGG KG R A+P
Sbjct: 61 KDIYLYINSPGGAIDSGLAVYDTMQHIKSDVVTICVGLAASMGSFLLAGGTKGKRLALPH 120
Query: 188 SRIALDSP--AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G RGQA DI EA E+LR+R + + ++ TGQP EKI KD R
Sbjct: 121 SRIMIHQPLLPGGMRGQASDIEIEAREILRIRRQMNEIYAQNTGQPIEKIEKDSERDFFM 180
Query: 246 GSQEALEYGLIDRII 260
+ EA EYGLID++I
Sbjct: 181 SAAEAKEYGLIDKVI 195
>gi|78185116|ref|YP_377551.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9902]
gi|124013823|sp|Q3AVC3.1|CLPP3_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|78169410|gb|ABB26507.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 200
Score = 199 bits (507), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G +R QA DI EA E+LR++D + L+ +GQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKDMLNHSLADMSGQTFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA+ YGLIDR+I P
Sbjct: 181 AEEAMAYGLIDRVISHP 197
>gi|87125532|ref|ZP_01081377.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
RS9917]
gi|86166832|gb|EAQ68094.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
RS9917]
Length = 200
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 132/197 (67%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+ QA DI EA+E+LR+++ + + ++ TG+ FE I KD R
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEANEILRIKEMLNRSMAAMTGKSFETIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA +YGLIDR+I P
Sbjct: 181 AEEAKDYGLIDRVISHP 197
>gi|260436469|ref|ZP_05790439.1| Clp protease [Synechococcus sp. WH 8109]
gi|260414343|gb|EEX07639.1| Clp protease [Synechococcus sp. WH 8109]
Length = 200
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G +R QA DI EA E+LR+++ + + L+ +GQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLADMSGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA EYGLIDR+I P
Sbjct: 181 AEEAKEYGLIDRVISHP 197
>gi|254431764|ref|ZP_05045467.1| Clp protease [Cyanobium sp. PCC 7001]
gi|197626217|gb|EDY38776.1| Clp protease [Cyanobium sp. PCC 7001]
Length = 200
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 129/197 (65%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFMGSEVNDAVANALVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ++ QA DI EA E+LR++D + ++ TGQPFEKI KD R
Sbjct: 121 SRIMIHQPLGGTSQRQASDIAIEAKEILRIKDMLNHSMADMTGQPFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA +YGLIDR+I P
Sbjct: 181 AAEAKDYGLIDRVIAHP 197
>gi|88809170|ref|ZP_01124679.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787112|gb|EAR18270.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 200
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+ QA DI EA E+LR+++ + + ++ +GQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKEMLNRSMAEMSGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
SQEA++YGLIDR+I P
Sbjct: 181 SQEAMDYGLIDRVIAHP 197
>gi|428778679|ref|YP_007170465.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
gi|428692958|gb|AFZ49108.1| protease subunit of ATP-dependent protease [Dactylococcopsis salina
PCC 8305]
Length = 200
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 133/200 (66%), Gaps = 2/200 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ WV++++ LYRER+IF+G+ I++ +NQI+A MLYLDS D S
Sbjct: 1 MPIGVPKVPYQMPGQPYSDWVNIYDRLYRERIIFLGRGINDGLANQIIAVMLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V+ +AIYDTMQ +KS V T CVG A + FLL G +G R A+P
Sbjct: 61 KPIYLYINSPGGSVSAGMAIYDTMQHIKSEVVTICVGIAASMGAFLLTAGTQGKRIALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G +G QA DI EA E+LR+R + + +++ TGQ EKI KD R
Sbjct: 121 SRIMIHQPLGGTQGRRQATDIEIEAREILRIRQQLDEIMAKNTGQTVEKIKKDTDRDFFM 180
Query: 246 GSQEALEYGLIDRIIRPPRI 265
++EA YG+IDR+I I
Sbjct: 181 SAEEAKNYGIIDRVIEEKNI 200
>gi|388517459|gb|AFK46791.1| unknown [Lotus japonicus]
Length = 162
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/130 (69%), Positives = 106/130 (81%)
Query: 12 PSLSCNLKLFSGLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIG 71
P SC K+++GLK QS S FG PN++AEFY +V K+L N KP+R RI M+PIG
Sbjct: 16 PPSSCATKIYTGLKPQSASPFGAAIPNVNAEFYAKVDKTLQCRYANHKPVRARIQMVPIG 75
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
TP+V YRTPGEG+WQWVD+WNALYRERVIFIGQ IDEEFSNQILATMLYLDSVD++KR+Y
Sbjct: 76 TPRVPYRTPGEGTWQWVDIWNALYRERVIFIGQEIDEEFSNQILATMLYLDSVDNAKRLY 135
Query: 132 MYINGPGGDV 141
MYINGPG +
Sbjct: 136 MYINGPGWGI 145
>gi|113952713|ref|YP_729943.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9311]
gi|113880064|gb|ABI45022.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. CC9311]
Length = 200
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ++++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQDVNDGVANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+ QA DI EA E+LR+++ + + ++ TGQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKEMLNRSMADMTGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA +YGLIDR+I P
Sbjct: 181 AAEAKDYGLIDRVISHP 197
>gi|78779795|ref|YP_397907.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9312]
gi|123969045|ref|YP_001009903.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. AS9601]
gi|126696838|ref|YP_001091724.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9301]
gi|157413876|ref|YP_001484742.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9215]
gi|254526963|ref|ZP_05139015.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
gi|115311346|sp|Q319H4.1|CLPP2_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78713294|gb|ABB50471.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
gi|123199155|gb|ABM70796.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126543881|gb|ABO18123.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|157388451|gb|ABV51156.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|221538387|gb|EEE40840.1| Clp protease [Prochlorococcus marinus str. MIT 9202]
Length = 203
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D+S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT++ +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ++ QA DI EA E+LR++D + ++ TGQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNMSMADMTGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA YGLIDR+I P
Sbjct: 181 AEEAKNYGLIDRVITHP 197
>gi|148240100|ref|YP_001225487.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7803]
gi|147848639|emb|CAK24190.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 200
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLLA G +G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLAAGTQGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+ QA DI EA E+LR+++ + + ++ +GQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAQEILRMKEMLNRSMADMSGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
SQEA++YGLIDR+I P
Sbjct: 181 SQEAMDYGLIDRVIAHP 197
>gi|33240837|ref|NP_875779.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460521|sp|Q7VAR9.1|CLPP2_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33238366|gb|AAQ00432.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 200
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +
Sbjct: 1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVTDGVANSLVAQMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL+ G K R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ++ QA DI EA E+LR++D + + ++ TGQPFEKI KD R
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAKEILRIKDMLNRSMAEMTGQPFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA +YGLID++I P
Sbjct: 181 AKEAKDYGLIDKVISHP 197
>gi|254798629|ref|YP_003058293.1| ATP-dependent Clp protease proteolytic subunit [Parachlorella
kessleri]
gi|229915577|gb|ACQ90920.1| proteolytic subunit 2 of clp protease [Parachlorella kessleri]
Length = 202
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 88/192 (45%), Positives = 135/192 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + QWVDL+N LYRERV+F+ +D+E +NQ++ MLYL++ + +
Sbjct: 1 MPIGVPKVPFRLPGEPAAQWVDLYNRLYRERVLFLCGELDDELANQLIGIMLYLNAEEKN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +A+YD M +KS V T CVG A +A F+LAGG G R A+P
Sbjct: 61 KGIYIYINSPGGSVTCGIAVYDAMNYIKSEVTTICVGTAASMASFILAGGAYGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ++GQA ++ +E+ E++R+R + + + +TGQP +I++D+ R + +
Sbjct: 121 SRIMIHQPEGGSQGQASEVLSESQEVMRIRREVGRIYAERTGQPLSRISRDMDRDQFMSA 180
Query: 248 QEALEYGLIDRI 259
+E EYG++D++
Sbjct: 181 RETKEYGIVDQV 192
>gi|72382719|ref|YP_292074.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL2A]
gi|124026440|ref|YP_001015555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL1A]
gi|115311347|sp|Q46JF7.1|CLPP2_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|72002569|gb|AAZ58371.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|123961508|gb|ABM76291.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 200
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS + T CVG A + FLL+ G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDLVTICVGLAASMGAFLLSAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+ QA DI EA E+LR+++ + K ++ TGQ +EKI KD R
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNKSMAEMTGQTYEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA YGLIDR+I P
Sbjct: 181 AEEAKNYGLIDRVITHP 197
>gi|352096272|ref|ZP_08957152.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676966|gb|EHA60117.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 200
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G ++++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSDVNDGVANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+ QA DI EA E+LR+++ + + ++ TGQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKEMLNRSMADMTGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA +YGLIDR+I P
Sbjct: 181 AEEAKDYGLIDRVISHP 197
>gi|33866183|ref|NP_897742.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8102]
gi|67460509|sp|Q7U5Q2.1|CLPP3_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33639158|emb|CAE08164.1| ATP-dependent Clp protease proteolytic subunit 3 [Synechococcus sp.
WH 8102]
Length = 200
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G +R QA DI EA E+LR+++ + + LS +GQ F+KI KD R
Sbjct: 121 SRIMIHQPLGGTSRRQASDIEIEAREILRMKEMLNRSLSDMSGQSFDKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA +YGLIDR+I P
Sbjct: 181 AEEAKDYGLIDRVISHP 197
>gi|123966708|ref|YP_001011789.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123201074|gb|ABM72682.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 201
Score = 197 bits (500), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D++
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT++ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ++ QA DI EA E+LR++D + K ++ TGQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNKSMADMTGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA YGLIDR+I P
Sbjct: 181 AEEAKNYGLIDRVISHP 197
>gi|317970581|ref|ZP_07971971.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0205]
Length = 200
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D+S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGSEVNDAIANSLVAQMLYLDSDDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ++ QA DI EA E+LR++D + ++ TGQP EKI KD R
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRMKDMLNNSMAGMTGQPVEKIEKDTDRDYFMS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA+ YGLIDR+I P
Sbjct: 181 AEEAMNYGLIDRVIAHP 197
>gi|159903903|ref|YP_001551247.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159889079|gb|ABX09293.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 223
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 132/198 (66%), Gaps = 1/198 (0%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
+MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D
Sbjct: 23 IMPIGTPSVPYRLPGSQFERWVDIYTRLGAERILFLGQEVNDGVANSLVAQMLYLDSEDS 82
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL+ G K R A+P
Sbjct: 83 TKPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLSAGTKNKRLALP 142
Query: 187 LSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G ++ QA DI EA E+LR+++ + + L+ TGQ FEKI KD R
Sbjct: 143 HSRIMIHQPLGGTSQRQASDIEIEAKEILRIKEMLNRSLAEMTGQSFEKIEKDTDRDYFL 202
Query: 246 GSQEALEYGLIDRIIRPP 263
++EA EYGLID++I P
Sbjct: 203 SAKEAEEYGLIDKVICHP 220
>gi|428202895|ref|YP_007081484.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
gi|427980327|gb|AFY77927.1| protease subunit of ATP-dependent protease [Pleurocapsa sp. PCC
7327]
Length = 199
Score = 196 bits (499), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/194 (50%), Positives = 130/194 (67%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSQFERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSDDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG VT +AIYDTMQ +K+ V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYMYINSPGGSVTAGMAIYDTMQYIKADVITICVGLAASMGAFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G R QA DI EA E++R+R + + L+++TGQP E+I KD R
Sbjct: 121 SRIMIHQPLGGTGRRQATDIEIEAKEIIRIRRQLNEILAQRTGQPIERIEKDTDRDYFMS 180
Query: 247 SQEALEYGLIDRII 260
++EA EYGLIDR+I
Sbjct: 181 AEEAKEYGLIDRVI 194
>gi|87302965|ref|ZP_01085769.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282461|gb|EAQ74420.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 200
Score = 196 bits (498), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + P G ++ QA DI EA E+LR++D + + L+ GQ EK+TKD R
Sbjct: 121 ARIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNQSLADMCGQSLEKVTKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA +YGLIDR+I P
Sbjct: 181 AAEAKDYGLIDRVISHP 197
>gi|33861870|ref|NP_893431.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|67460515|sp|Q7V0F1.1|CLPP2_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33640238|emb|CAE19773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 201
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ +++ +N ++A MLYLDS D++
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGQEVNDGIANSLVAQMLYLDSDDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT++ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIKYVKSDVVTICVGLAASMGAFLLGAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ++ QA DI EA E+LR++D + +S TGQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNHSMSDMTGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA YGLIDR+I P
Sbjct: 181 AEEAKNYGLIDRVISHP 197
>gi|443310464|ref|ZP_21040115.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
gi|442779502|gb|ELR89744.1| protease subunit of ATP-dependent protease [Synechocystis sp. PCC
7509]
Length = 197
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 97/193 (50%), Positives = 128/193 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R PGE QW++++ L ER+IF+ + + +N I+A +LYLDS D S
Sbjct: 1 MPIGIPRVPHRFPGEPYTQWINIYERLSLERIIFLSGEVTDGMANSIIARLLYLDSEDQS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS + T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIYIYINSPGGSVTAGLAIYDTMQHIKSNIVTICVGMAASMGSFLLAAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + PAG A+GQA DI EA E+LR+R + + L+ +T QP KI KD R +
Sbjct: 121 ARIMIHQPAGGAQGQATDIEIEAREILRLRHQLNQMLADRTSQPLAKIEKDTDRDYFMSA 180
Query: 248 QEALEYGLIDRII 260
EA +YGLIDR+I
Sbjct: 181 AEAKDYGLIDRVI 193
>gi|116073334|ref|ZP_01470596.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068639|gb|EAU74391.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 200
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 129/197 (65%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGSEVNDAVANSLVAQMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+ QA DI EA E+LR+++ + + ++ TGQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRIKEMLNRSMADMTGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+++A YGLIDR+I P
Sbjct: 181 AEDAKNYGLIDRVIAHP 197
>gi|119493580|ref|ZP_01624244.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119452570|gb|EAW33753.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 198
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/193 (49%), Positives = 127/193 (65%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +WVD++ L +ER+IF+GQ + + +N+I+A+MLYLDS D +
Sbjct: 1 MPIGVPSVPYRLPGSQYERWVDIYTRLNQERIIFLGQEVTDGLANRIVASMLYLDSDDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVVTICVGLAASMGAFLLASGTPGKRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G RGQA DI EA E+LR+R + L+ + Q EK+ KD R +
Sbjct: 121 ARIMIHQPMGGTRGQASDIEIEAREILRIRSLLNSILAERAHQSIEKVEKDTDRDYFLSA 180
Query: 248 QEALEYGLIDRII 260
+EA EYGL+D++I
Sbjct: 181 EEAREYGLVDQVI 193
>gi|148241694|ref|YP_001226851.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RCC307]
gi|147850004|emb|CAK27498.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 200
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGGEVNDGVANALVAQMLYLDSDDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLLA G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYIKSDVVTICVGLAASMGAFLLAAGTKGKRVALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+ QA DI EA E+LR++D + K+L+ +GQ EKITKD R
Sbjct: 121 SRIMIHQPLGGTAQRQASDIEIEAREILRMKDQLNKQLADMSGQTIEKITKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ +A YGLIDR+I P
Sbjct: 181 ADDAKAYGLIDRVISHP 197
>gi|33862587|ref|NP_894147.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9313]
gi|67460518|sp|Q7V8M4.1|CLPP2_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33634503|emb|CAE20489.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9313]
Length = 200
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G + QA DI EA E+LR++D + ++ TGQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTNQRQASDIEIEAREILRIKDMLNHSMAELTGQSFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA +YGLIDR+I P
Sbjct: 181 AAEAKDYGLIDRVIAHP 197
>gi|124023703|ref|YP_001018010.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123963989|gb|ABM78745.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 200
Score = 194 bits (493), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 98/197 (49%), Positives = 127/197 (64%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+GQ + + +N ++A MLYLDS D +
Sbjct: 1 MPIGTPSVPYRLPGSQMERWVDIYTRLGVERILFLGQEVSDGVANSLVAQMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTM+ +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTMKYVKSDVVTICVGLAASMGAFLLTAGTKGKRLALPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G + QA DI EA E+LR++D + ++ TGQ FEKI KD R
Sbjct: 121 SRIMIHQPLGGTNQRQASDIEIEAREILRIKDMLNHSMAELTGQTFEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA +YGLIDR+I P
Sbjct: 181 AAEAKDYGLIDRVIAHP 197
>gi|113170419|ref|YP_717211.1| ClpP [Ostreococcus tauri]
gi|122228950|sp|Q0P3P4.1|CLPP_OSTTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112806826|emb|CAL36333.1| ClpP [Ostreococcus tauri]
Length = 200
Score = 193 bits (491), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 90/192 (46%), Positives = 128/192 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE + QWVDL+N LYRERV+F+G +D+E +NQ+ MLYL + D S
Sbjct: 1 MPIGVPKVAYRLPGESTPQWVDLYNRLYRERVLFLGSGLDDELANQLNGIMLYLSAEDAS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++YIN PGG VT L+++D M +++ V T +GFA +A F+LAGGE+G+R A+P
Sbjct: 61 RSLFLYINSPGGSVTAGLSVFDIMNYVQASVTTIGIGFAASMASFILAGGERGSRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
R+ + P G GQA ++ E +E++R+R I + TGQP I DL R K +
Sbjct: 121 CRVMIHQPQGGMEGQASEVVLEKEEIVRLRRLIGRLYVDLTGQPLSTIANDLDRDKYLSA 180
Query: 248 QEALEYGLIDRI 259
+EA EYGL+D +
Sbjct: 181 REAREYGLVDLV 192
>gi|172036826|ref|YP_001803327.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354554635|ref|ZP_08973939.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
gi|171698280|gb|ACB51261.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353553444|gb|EHC22836.1| Endopeptidase Clp [Cyanothece sp. ATCC 51472]
Length = 199
Score = 193 bits (490), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/194 (50%), Positives = 129/194 (66%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ +++ +N+I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVNDAIANRIVALLLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + P G R QA DI EA+E+LR+R + + L+ K GQ EKI KD R
Sbjct: 121 ARIMIHQPMGGTGRRQASDIEIEANEILRIRAQLNQILADKCGQSLEKIEKDTDRDYFMS 180
Query: 247 SQEALEYGLIDRII 260
++EA EYGLID++I
Sbjct: 181 AEEAKEYGLIDKVI 194
>gi|318040432|ref|ZP_07972388.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0101]
Length = 200
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 128/197 (64%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG +WVD++ L ER++F+G +++ +N ++A MLYLDS D+S
Sbjct: 1 MPIGTPSVPYRLPGSQYERWVDIYTRLGVERILFLGSEVNDAIANSLVAQMLYLDSEDNS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDT+Q +KS V T CVG A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGLAIYDTIQYVKSDVVTICVGLAASMGAFLLGAGTKGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ++ QA DI EA E+LR++D + + ++ TGQ KI KD R
Sbjct: 121 SRIMIHQPLGGTSQRQASDIEIEAREILRIKDMLNQSMADMTGQELAKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRIIRPP 263
++EA YGLIDR+I P
Sbjct: 181 AEEAKNYGLIDRVIAHP 197
>gi|126657894|ref|ZP_01729047.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126620834|gb|EAZ91550.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 199
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 128/194 (65%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVTDGIANRIVALLLYLDSEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + P G R QA DI EA+E+LR+R + + L+ + GQ EKI KD R
Sbjct: 121 ARIMIHQPMGGTGRRQASDIEIEANEILRIRSQLNQLLANQCGQTLEKIEKDTDRDYFMS 180
Query: 247 SQEALEYGLIDRII 260
++EA EYGLID++I
Sbjct: 181 AEEAKEYGLIDKVI 194
>gi|86608099|ref|YP_476861.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|115311344|sp|Q2JHM1.1|CLPP1_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86556641|gb|ABD01598.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 203
Score = 190 bits (483), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 127/195 (65%), Gaps = 1/195 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YR PGE QW+ L + LY+ER++FIG+ ID+ +N I+ MLYL+S D
Sbjct: 1 MPIGVPRVPYRLPGEPYSQWISLDDRLYQERILFIGEPIDDSLANTIVGVMLYLNSQDPQ 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + MYIN PGG VT +AIYDTM +K + T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIVMYINSPGGSVTAGMAIYDTMNHIKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI L P+ G +GQA DI A E LRV+ + + L++ TGQP EKI +D+ R
Sbjct: 121 SRIMLHQPSLGTIQGQASDIEIRARETLRVKRRMNEILAQTTGQPLEKIERDVERDFYLS 180
Query: 247 SQEALEYGLIDRIIR 261
+ EA YG++DR+I+
Sbjct: 181 ATEAQAYGIVDRVIQ 195
>gi|218245805|ref|YP_002371176.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
8801]
gi|34222618|sp|Q93AD7.1|CLPP_SYNP8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|16506757|gb|AAL23931.1|AF423175_1 putative ATP-dependent Clp proteinase [Cyanothece sp. PCC 8801]
gi|218166283|gb|ACK65020.1| Endopeptidase Clp [Cyanothece sp. PCC 8801]
Length = 199
Score = 190 bits (482), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 128/194 (65%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D
Sbjct: 1 MPLGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + P G R QA DI+ EA+E+LR+R + + L+ KTGQ EKI KD R
Sbjct: 121 ARIMIHQPMGGTGRRQATDIQIEANEILRIRQQLNEILAHKTGQTIEKIQKDTDRDYYMS 180
Query: 247 SQEALEYGLIDRII 260
++EA YGLID++I
Sbjct: 181 AEEAQAYGLIDKVI 194
>gi|226968697|ref|YP_002808657.1| protease subunit of the ATP-dependent Clp endopeptidase [Micromonas
sp. RCC299]
gi|226431175|gb|ACO55581.1| protease subunit of the ATP-dependent Clp endopeptidase [Micromonas
sp. RCC299]
Length = 200
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/192 (47%), Positives = 125/192 (65%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QWVDL+N LYRERV+F+G +D+E +NQ+ MLYL + D
Sbjct: 1 MPIGVPKVAYRLPGEAVPQWVDLYNRLYRERVLFLGSALDDELANQLNGIMLYLSAEDSQ 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+R+++YIN PGG VT L+++D M + + V T +GFA +A F+LAGGE+G R A+P
Sbjct: 61 RRLFLYINSPGGSVTAGLSVFDIMNYVDAAVTTIGIGFAASMASFILAGGERGARLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
RI + P G GQA +I E DE++R+R I + TGQ I +DL R K +
Sbjct: 121 CRIMIHQPQGGMEGQASEIVLEKDEIIRLRKLIGRLYVDLTGQSAATIARDLDRDKFLSA 180
Query: 248 QEALEYGLIDRI 259
++A EYGL+D +
Sbjct: 181 RDAREYGLVDLV 192
>gi|16331162|ref|NP_441890.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|383322904|ref|YP_005383757.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326073|ref|YP_005386926.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383491957|ref|YP_005409633.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384437225|ref|YP_005651949.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451815318|ref|YP_007451770.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|3023511|sp|P74467.1|CLPP3_SYNY3 RecName: Full=Probable ATP-dependent Clp protease proteolytic
subunit 3; AltName: Full=Endopeptidase Clp 3
gi|1653656|dbj|BAA18568.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339274257|dbj|BAK50744.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359272223|dbj|BAL29742.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359275393|dbj|BAL32911.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359278563|dbj|BAL36080.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|407961461|dbj|BAM54701.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7613]
gi|451781287|gb|AGF52256.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 202
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 129/194 (66%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V +R PG +W+D++ L +ER+IF+GQ +++ +N+I+A +LYLDS D S
Sbjct: 1 MPIGVPSVPFRLPGSQYERWIDIYTRLSQERIIFLGQEVNDSIANRIVAFLLYLDSDDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +K+ V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKAEVITICVGLAASMGAFLLASGAPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + P G R QA DI EA E+LR+R + + ++++TGQ EKI KD R
Sbjct: 121 ARIMIHQPMGGTGRRQATDIDIEAREILRIRQQLNEIMAQRTGQTVEKIAKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRII 260
+ EA EYGLID++I
Sbjct: 181 AAEAKEYGLIDKVI 194
>gi|86605372|ref|YP_474135.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
JA-3-3Ab]
gi|115311343|sp|Q2JWJ1.1|CLPP1_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|86553914|gb|ABC98872.1| putative ATP-dependent Clp protease, proteolytic subunit ClpP
[Synechococcus sp. JA-3-3Ab]
Length = 203
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 127/195 (65%), Gaps = 1/195 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V YR PGE QW+ L + LY+ER++FIG+ ID+ +N I+ MLYL+S D
Sbjct: 1 MPIGVPRVPYRLPGEPYSQWISLDDRLYQERILFIGEPIDDNLANTIVGVMLYLNSQDPQ 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + MYIN PGG VT +AIYDTM +K + T CVG A + FLLA G KG R A+P
Sbjct: 61 KDIVMYINSPGGSVTAGMAIYDTMNHVKPDIVTVCVGQAASMGAFLLAAGTKGKRFALPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI L P+ G +GQA DI A E LRV+ + + L++ TGQP EKI +D+ R
Sbjct: 121 SRIMLHQPSLGMIQGQASDIEIRARETLRVKRRMNELLAQMTGQPLEKIERDVERDFYLS 180
Query: 247 SQEALEYGLIDRIIR 261
+ EA YG++DR+I+
Sbjct: 181 ATEAQAYGIVDRVIQ 195
>gi|257058851|ref|YP_003136739.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
8802]
gi|256589017|gb|ACU99903.1| Endopeptidase Clp [Cyanothece sp. PCC 8802]
Length = 199
Score = 189 bits (480), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 128/194 (65%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D
Sbjct: 1 MPLGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPG 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSDVITICVGLAASMGAFLLASGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + P G R QA DI+ EA+E+LR+R + + L+ KTGQ EKI KD R
Sbjct: 121 ARIMIHQPMGGTGRRQATDIQIEANEILRIRQQLNEILAYKTGQTIEKIQKDTDRDYYMS 180
Query: 247 SQEALEYGLIDRII 260
++EA YGLID++I
Sbjct: 181 AEEAQAYGLIDKVI 194
>gi|224179410|ref|YP_002600868.1| proteolytic subunit 2 of clp protease [Pycnococcus provasolii]
gi|217314453|gb|ACK36795.1| proteolytic subunit 2 of clp protease [Pycnococcus provasolii]
Length = 224
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/195 (45%), Positives = 126/195 (64%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE QWVDL+N LYRERV+F+GQ +D+E NQI+ MLYL + D S
Sbjct: 1 MPIGVPKVPYRLPGEQQAQWVDLYNRLYRERVLFLGQELDDELCNQIVGMMLYLSAEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +YIN PGG VT LA++DTM+ + + + T C+G A A F+L GG R A+P
Sbjct: 61 QNQELYINSPGGAVTCGLALFDTMEHVAANIITVCMGLAASTASFVLCGGTPLRRCALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+R+ + P G RGQA +I E+ E+LR+R + +++TGQ +++ D+ R F +
Sbjct: 121 ARVMIHQPEGGTRGQASEIIYESVEILRLRRQVGLLYAQRTGQSIDQVANDMDRDTFFSA 180
Query: 248 QEALEYGLIDRIIRP 262
+EA YGL+D + P
Sbjct: 181 EEARSYGLVDGVAYP 195
>gi|229915410|gb|ACQ90755.1| proteolytic subunit 2 of clp protease [Oocystis solitaria]
Length = 204
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 135/192 (70%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S QWVDL+N LYRER++F+ Q++D+E SNQ++ MLYL++ +
Sbjct: 1 MPIGVPKVPFRLPGEPSAQWVDLFNRLYRERLLFLCQDLDDEVSNQLIGIMLYLNAEEKF 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN GG VT +A+YD M +++ V T CVG A +A F+LAGG++G R A+P
Sbjct: 61 KDIYIFINSLGGSVTCGIAVYDVMNFVEADVSTICVGTAASMASFVLAGGKRGKRIALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G +GQA ++ +E++E+ R+R + + + +T Q +I++D+ R + +
Sbjct: 121 TRIMIHQPEGGGQGQASEVLSESEEVRRLRRQVGQIYAEQTSQSLNRISRDMDRDQFMSA 180
Query: 248 QEALEYGLIDRI 259
+EA EYGL+D++
Sbjct: 181 REAKEYGLVDQV 192
>gi|67921362|ref|ZP_00514880.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416383634|ref|ZP_11684482.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67856474|gb|EAM51715.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357265220|gb|EHJ14013.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 200
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 128/195 (65%), Gaps = 2/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D +
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLGQERIIFLGQEVSDGIANRIVALLLYLDSDDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSPAGAARG--QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+RI + P G G QA DI EA+E+LR+R + + L+ + GQ EKI KD R
Sbjct: 121 ARIMIHQPLGGTGGRRQATDIEIEANEILRIRAQLNQLLADQCGQSLEKIEKDTDRDYFM 180
Query: 246 GSQEALEYGLIDRII 260
++EA EYGLID++I
Sbjct: 181 SAEEAKEYGLIDKVI 195
>gi|284929271|ref|YP_003421793.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284809715|gb|ADB95412.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 198
Score = 187 bits (476), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+ Q + + +N+I+A +LYLDS D S
Sbjct: 1 MPIGIPSVPYRLPGSQYERWIDIYTRLGQERIIFLSQEVTDGIANRIVALLLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AI+DTMQ ++S V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIFDTMQYIRSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + P G R QA DI EA+E+LR+R + L+ K GQP EKI KD R
Sbjct: 121 ARIMIHQPMGGTGRRQASDIEIEANEILRIRAQLNNILATKCGQPLEKIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRII 260
++EA YGLID++I
Sbjct: 181 AEEAKNYGLIDQVI 194
>gi|166368459|ref|YP_001660732.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|390438071|ref|ZP_10226569.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|422301333|ref|ZP_16388701.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425436520|ref|ZP_18816955.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425442638|ref|ZP_18822879.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425447772|ref|ZP_18827754.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425450002|ref|ZP_18829834.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|425455950|ref|ZP_18835661.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|425462515|ref|ZP_18841989.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|425465071|ref|ZP_18844381.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|425470396|ref|ZP_18849266.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440753128|ref|ZP_20932331.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|443664109|ref|ZP_21133359.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
gi|159028168|emb|CAO89775.1| clpP [Microcystis aeruginosa PCC 7806]
gi|166090832|dbj|BAG05540.1| ATP-dependent Clp protease proteolytic subunit [Microcystis
aeruginosa NIES-843]
gi|389678721|emb|CCH92424.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389716257|emb|CCH99490.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389731601|emb|CCI04366.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389769363|emb|CCI05782.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|389792301|emb|CCI11972.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389803100|emb|CCI17966.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389824416|emb|CCI26621.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|389832761|emb|CCI23365.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|389838471|emb|CCI30693.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389883997|emb|CCI35668.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440177621|gb|ELP56894.1| clp protease family protein [Microcystis aeruginosa TAIHU98]
gi|443331652|gb|ELS46298.1| clp protease family protein [Microcystis aeruginosa DIANCHI905]
Length = 199
Score = 187 bits (475), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG QW+ +++ L ER++F+GQ + + +N ++A MLYLDS D +
Sbjct: 1 MPIGVPKVPYRLPGSQYEQWISIYSRLSVERILFLGQEVTDGLANALVAQMLYLDSEDPT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +K+ V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKAEVVTICVGLAASMGAFLLASGSPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + P G R QA DI EA E+LR+R + + ++ +TGQ E+I KD R
Sbjct: 121 ARIMIHQPMGGTGRRQATDIDIEAKEILRIRQQLNEIMANRTGQTIERIEKDTDRDYFLS 180
Query: 247 SQEALEYGLIDRII 260
++EA+ YGLID+++
Sbjct: 181 AEEAVAYGLIDKVV 194
>gi|218439262|ref|YP_002377591.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. PCC
7424]
gi|218171990|gb|ACK70723.1| Endopeptidase Clp [Cyanothece sp. PCC 7424]
Length = 199
Score = 187 bits (474), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 94/194 (48%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V +R PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D +
Sbjct: 1 MPIGVPSVPFRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVVTICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G R QA DI EA E+LR+R + + L+ +TG+ E+I KD R
Sbjct: 121 SRIMIHQPMGGTGRRQATDIEIEAKEILRIRQQLNQMLAERTGKTLEQIEKDTDRDYFMS 180
Query: 247 SQEALEYGLIDRII 260
EA EYGLID++I
Sbjct: 181 PYEAQEYGLIDKVI 194
>gi|307152499|ref|YP_003887883.1| endopeptidase Clp [Cyanothece sp. PCC 7822]
gi|306982727|gb|ADN14608.1| Endopeptidase Clp [Cyanothece sp. PCC 7822]
Length = 199
Score = 187 bits (474), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 95/194 (48%), Positives = 126/194 (64%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG +W+D++ L +ER+IF+GQ + + +N+I+A +LYLDS D +
Sbjct: 1 MPIGVPSVPYRLPGSQYERWIDIYTRLSQERIIFLGQEVTDGLANRIVAFLLYLDSEDPN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVITICVGLAASMGSFLLAAGTPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G R QA DI EA E+LR+R + + L+ +TG+ E+I KD R
Sbjct: 121 SRIMIHQPMGGTGRRQATDIEIEAKEILRIRTQLNQMLADRTGKSIEQIEKDTDRDYFMS 180
Query: 247 SQEALEYGLIDRII 260
EA EYGLID++I
Sbjct: 181 PYEAKEYGLIDKVI 194
>gi|22711907|ref|NP_683797.1| ATP-dependent Clp protease proteolytic subunit [Chaetosphaeridium
globosum]
gi|25008304|sp|Q8M9Y9.1|CLPP_CHAGL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|22416911|gb|AAM96511.1| proteolytic subunit 2 of clp protease [Chaetosphaeridium globosum]
Length = 201
Score = 186 bits (472), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 131/193 (67%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV YR PG+ QW+DL+N LYRER++F+GQ ++ E +NQI+ MLYL+ D S
Sbjct: 1 MPVGVPKVPYRLPGDVQVQWIDLYNRLYRERILFLGQTVNYEIANQIIGLMLYLNGDDKS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVVPGIAIYDTMQFVEPEIRTICMGVAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P+ + + QA ++ EA+E+L++RD I K ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPSSSYYKDQAGELIMEAEEVLKLRDCITKVYVQRTGKPISVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA EYG++D +
Sbjct: 181 AKEAKEYGIVDLV 193
>gi|254423169|ref|ZP_05036887.1| Clp protease [Synechococcus sp. PCC 7335]
gi|196190658|gb|EDX85622.1| Clp protease [Synechococcus sp. PCC 7335]
Length = 200
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/194 (47%), Positives = 127/194 (65%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIGTP V YR PG QW+ ++ L+RER+IF+ + +D+ +N I+A MLYLDS D +
Sbjct: 1 MPIGTPSVPYRLPGSTYEQWISIYERLFRERIIFLTEEVDDGIANAIVAYMLYLDSEDST 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ +KS V T C+G A + FLL G KG R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMQYIKSEVVTICMGLAASMGAFLLNAGTKGKRLALPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P+ G R QA DI EA +++VR + + ++ +G+ E+I +D R
Sbjct: 121 SRIMIHQPSGGVGRRQATDIEIEAVRIVQVRRELNELMAAHSGRTVEEIERDSDRDNFMS 180
Query: 247 SQEALEYGLIDRII 260
++EA EYGLIDR+I
Sbjct: 181 AEEAKEYGLIDRVI 194
>gi|443329661|ref|YP_007374739.1| ATP-dependent Clp protease proteolytic subunit 1 (chloroplast)
[Equisetum hyemale]
gi|441017852|gb|AGC26652.1| ATP-dependent Clp protease proteolytic subunit 1 (chloroplast)
[Equisetum hyemale]
Length = 204
Score = 184 bits (466), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 86/193 (44%), Positives = 130/193 (67%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D+E SNQ++ M+YL+ DD+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEISNQLVGIMMYLNGEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+YIN PGG V P +++YD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 RDLYLYINSPGGAVLPGISVYDAMQFVIPDVHTICMGLAASMGSFILAGGEITKRLALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + PA + GQA + EA+E+L++RD I K ++TG+P +++D+ R
Sbjct: 121 ARIMIHQPASSYYDGQAGECVLEAEEILKLRDCITKVYVQRTGKPLRIVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA +YGLID +
Sbjct: 181 AEEARDYGLIDLV 193
>gi|434386913|ref|YP_007097524.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
gi|428017903|gb|AFY93997.1| protease subunit of ATP-dependent protease [Chamaesiphon minutus
PCC 6605]
Length = 200
Score = 184 bits (466), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 127/200 (63%), Gaps = 1/200 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M IG P V YR PG + QW+++++ L+RER+IF+ + +D +N I+A MLYLDS D S
Sbjct: 1 MSIGVPSVPYRLPGSTNEQWINIYDRLFRERIIFMFEEVDAGMANAIVAYMLYLDSEDSS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG++T +AIYDT+Q +KS V T CVG A + FLLA G G R A+P
Sbjct: 61 KPIYLYINSPGGEITAGMAIYDTIQHIKSEVVTICVGLAASMGAFLLAAGSPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + P G R QA DI+ EA +L R + + ++ ++GQ +I KD R
Sbjct: 121 ARIMIHQPLGGTGRMQASDIQIEAKHILETRTLLNQLMADRSGQTLAQIEKDTDRDNFMS 180
Query: 247 SQEALEYGLIDRIIRPPRIK 266
+ EA+ YGLID+++ ++
Sbjct: 181 AAEAMAYGLIDKVVETANVR 200
>gi|413953313|gb|AFW85962.1| hypothetical protein ZEAMMB73_355536 [Zea mays]
Length = 139
Score = 182 bits (462), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 81/124 (65%), Positives = 108/124 (87%)
Query: 145 LAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQAD 204
+A+YDTM SLKSP+GTHC+GFA++LAGF+LA GEKG+R+ MPL RI+L SPAGAARGQAD
Sbjct: 1 MALYDTMLSLKSPIGTHCLGFAFNLAGFILAAGEKGSRTGMPLCRISLQSPAGAARGQAD 60
Query: 205 DIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 264
DI NEA+EL+R+++Y++ +L+ TG EKI +DLSR+KRF ++ ALEYG+IDRI+RP R
Sbjct: 61 DIENEANELIRIKNYLYGKLAGHTGHSVEKIHEDLSRVKRFDAEGALEYGIIDRIVRPSR 120
Query: 265 IKED 268
IK++
Sbjct: 121 IKKE 124
>gi|313183906|ref|YP_004021760.1| clp protease proteolytic subunit [Equisetum arvense]
gi|281371626|gb|ADA63559.1| clp protease proteolytic subunit (chloroplast) [Equisetum arvense]
gi|359751569|gb|AEV58363.1| clp protease proteolytic subunit [Equisetum arvense]
Length = 204
Score = 181 bits (460), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 129/193 (66%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D+E SNQ++ M+YL+ DD+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEISNQLVGIMMYLNGEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+YIN PGG V P +++YD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 RDLYLYINSPGGAVLPGISVYDAMQFVIPDVHTICMGLAASMGSFILAGGEITKRLALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + PA + GQA + EA+E+ ++RD I K ++TG+P +++D+ R
Sbjct: 121 ARIMIHQPASSYYDGQAGECVLEAEEISKLRDCITKVYVQRTGKPLRVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA +YGLID +
Sbjct: 181 AEEARDYGLIDLV 193
>gi|359422169|ref|YP_004935577.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Eleutherococcus senticosus]
gi|347448232|gb|AEO92644.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Eleutherococcus senticosus]
Length = 196
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 87/193 (45%), Positives = 127/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ ID E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAIDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + +KTG+PF +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQKTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|108796785|ref|YP_636436.1| ATP-dependent Clp protease proteolytic subunit [Staurastrum
punctulatum]
gi|122211785|sp|Q32RU0.1|CLPP_STAPU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|61393553|gb|AAX45694.1| proteolytic subunit 2 of clp protease [Staurastrum punctulatum]
Length = 201
Score = 181 bits (458), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 129/193 (66%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R PGE WVD++N LYRER++F+GQN+D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPRVPFRLPGEEEAVWVDVYNRLYRERLLFLGQNVDDEIANQLIGIMIYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECMMEAEEVLKLRDCITKVYVQRTGKPAWLISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA EYG++D +
Sbjct: 181 AKEAQEYGIVDLV 193
>gi|153805564|ref|YP_001382140.1| ATP-dependent Clp protease proteolytic subunit [Leptosira
terrestris]
gi|160380555|sp|A6YG63.1|CLPP_LEPTE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134270095|gb|ABO69284.1| proteolytic subunit 2 of clp protease [Leptosira terrestris]
Length = 196
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 127/192 (66%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV Y P E W+DL++ LY+ER+I I ++++E NQI++ ++YL + DDS
Sbjct: 1 MPVGVPKVFYALPDEEEADWIDLYHCLYQERLIVICGDLNDEAVNQIVSVLIYLSTRDDS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++YIN PGG VT +AIYD M+ +PV T VG + +A F+LAGG+ G R A P
Sbjct: 61 KEFFIYINSPGGSVTSGIAIYDAMRFNNTPVNTIAVGISASMASFILAGGDIGKRLAFPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G + GQ+ +I +EA E++R+R + + +++TGQP + I +D+ R + +
Sbjct: 121 SRIMIHQPEGGSEGQSSEIVHEAQEVVRIRRQVARIYAQRTGQPLDTIARDMDRDQFMSA 180
Query: 248 QEALEYGLIDRI 259
+EA YG++D +
Sbjct: 181 REAKTYGIVDLV 192
>gi|11466349|ref|NP_038352.1| ATP-dependent Clp protease proteolytic subunit [Mesostigma viride]
gi|12229759|sp|Q9MUV8.1|CLPP_MESVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|7259492|gb|AAF43793.1|AF166114_5 proteolytic subunit 2 of clp protease (chloroplast) [Mesostigma
viride]
Length = 229
Score = 180 bits (456), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 125/193 (64%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE +VD++N LYRER++F+G+++D+E +NQ++ M++L+S DD+
Sbjct: 1 MPIGIPKVAYRIPGEAVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ YIN PGG + L +YD +Q + V T C+G A +A F+LAGG G R P
Sbjct: 61 KGIFFYINSPGGSMNAGLGVYDMIQHVNVDVTTICMGLAASMASFILAGGTPGQRLMFPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+R+ L P G G+A + E+ E+ R+R+ I ++TGQ EKI KD++R
Sbjct: 121 ARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYVKRTGQSLEKIRKDMNRDNFMRP 180
Query: 248 QEALEYGLIDRII 260
++A EYGLID ++
Sbjct: 181 RQAKEYGLIDHMV 193
>gi|116072309|ref|ZP_01469576.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116064831|gb|EAU70590.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 184
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 120/179 (67%), Gaps = 1/179 (0%)
Query: 86 QWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTL 145
+WVD++ L ER++F+G +++ +N ++A MLYLDS D SK +Y+YIN PGG VT L
Sbjct: 3 RWVDIYTRLGVERILFLGSEVNDGIANSLVAQMLYLDSEDSSKPIYLYINSPGGSVTAGL 62
Query: 146 AIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP-AGAARGQAD 204
AI+DT+Q +KS V T CVG A + FLLA G KG R A+P SRI + P G +R QA
Sbjct: 63 AIFDTIQYVKSEVVTICVGLAASMGAFLLAAGTKGKRVALPHSRIMIHQPLGGTSRRQAS 122
Query: 205 DIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 263
DI EA E+LR++D + L+ +GQ FEKI KD R +QEA++YGLIDR+I P
Sbjct: 123 DIEIEAREILRMKDMLNHSLADMSGQTFEKIEKDTDRDYFLSAQEAMDYGLIDRVISHP 181
>gi|428165659|gb|EKX34649.1| hypothetical protein GUITHDRAFT_155685 [Guillardia theta CCMP2712]
Length = 271
Score = 179 bits (455), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/211 (41%), Positives = 138/211 (65%), Gaps = 7/211 (3%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P+V Y+ PG+ +Q++D+WN +YRER+++IGQ++D+EF+NQ++A +L+L++ D ++ V
Sbjct: 52 VPRVPYKAPGDQVYQFMDIWNRMYRERILYIGQDLDDEFANQMIAVLLWLNNEDATQGVQ 111
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MY N PGG+V LA+YDTM ++ V T +G A ++ FL G+KG R A+P +R
Sbjct: 112 MYFNCPGGEVRAGLAVYDTMNNMDFDVTTLNLGIAASISAFLCGAGKKGQRMALPNARFL 171
Query: 192 LDSP-------AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
L +P + GQA D+ EA E+LR+R+ +FK LSR TG+ +E I DL+R
Sbjct: 172 LQNPKLEDMGLSQVLYGQASDVSIEATEILRMREKVFKGLSRFTGRKYEDIRNDLTRDLY 231
Query: 245 FGSQEALEYGLIDRIIRPPRIKEDMPRKDAG 275
+ EA+EYGLID+++ P + E +K G
Sbjct: 232 LTAPEAVEYGLIDKVLLPLKRTEQEIKKYIG 262
>gi|49574608|ref|NP_848084.2| ATP-dependent Clp protease proteolytic subunit [Adiantum
capillus-veneris]
gi|68565049|sp|Q85FJ8.2|CLPP_ADICA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|48476019|gb|AAP29415.2| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Adiantum capillus-veneris]
Length = 200
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 130/193 (67%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D+E +NQ++ M+YL+S D +
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNSEDQA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+Y+N PGG V +++YD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 KDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITRRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K +++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEVLKLRDCITKVYAQRTGKPLWLISEDMERDVFLS 180
Query: 247 SQEALEYGLIDRI 259
++EA +YG++D +
Sbjct: 181 AEEAQDYGVVDLV 193
>gi|124112049|ref|YP_001019072.1| proteolytic subunit 2 of clp protease [Chlorokybus atmophyticus]
gi|160380575|sp|Q19VC3.2|CLPP_CHLAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124012165|gb|ABD62181.2| proteolytic subunit 2 of clp protease [Chlorokybus atmophyticus]
Length = 225
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 125/193 (64%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PGE +VD++N LYRER++F+G+++D+E +NQ++ M++L+S DD+
Sbjct: 1 MPIGIPKVAYRIPGESVSTYVDVYNRLYRERILFLGEDLDDEVANQLIGVMVFLNSEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ YIN PGG + L +YD +Q + V T C+G A +A F+LAGG G R P
Sbjct: 61 KGIFFYINSPGGSMNSGLGVYDMIQHINVDVTTICMGLAASMASFILAGGTPGQRLMFPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+R+ L P G G+A + E+ E+ R+R+ I +++TGQP E+I D++R
Sbjct: 121 ARVMLHQPMGGNGGKAKYMVEESVEVKRLRELIAHLYAKRTGQPIERIRIDMNRDNFMRP 180
Query: 248 QEALEYGLIDRII 260
+ A EYGLID +I
Sbjct: 181 RAAKEYGLIDHMI 193
>gi|28202196|ref|NP_777437.1| ATP-dependent Clp protease proteolytic subunit [Anthoceros
formosae]
gi|41688497|sp|Q85BZ1.1|CLPP_ANTFO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27807898|dbj|BAC55373.1| ATP-dependent protease proteolytic subunit exon3 (chloroplast)
[Anthoceros formosae]
gi|27808041|dbj|BAC55470.1| ATP-dependent protease proteolytic subunit (chloroplast)
[Anthoceros formosae]
Length = 204
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 129/193 (66%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ++D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YDTMQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDTMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + PA + GQA + EA+E+L++RD I K ++TG+P I++D+ R
Sbjct: 121 ARIMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG++D +
Sbjct: 181 AKEAQIYGIVDFV 193
>gi|52220834|ref|YP_086990.1| ATP-dependent Clp protease proteolytic subunit [Panax ginseng]
gi|68052101|sp|Q68RY2.1|CLPP_PANGI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|51235337|gb|AAT98533.1| ATP-dependent protease; catalytic subunit [Panax ginseng]
Length = 196
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ + E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAYWVDIYNRLYRERLLFLGQPVASEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+++N PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFMNSPGGWVLPGIAIYDTMQFVRPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + +KTG+PF +++DL R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETITRVYVQKTGKPFWVVSEDLERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|269792564|ref|YP_003317468.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
gi|269100199|gb|ACZ19186.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio acidaminovorans DSM 6589]
Length = 199
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 126/188 (67%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IFIGQ ID+ SN ++A +L+L+S D K V++
Sbjct: 11 PYVIEQT-GRGERSY-DIYSRLLKDRIIFIGQEIDDHLSNLVVAQLLFLESEDPDKDVFV 68
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ +K PV T CVG A +A LL+ GEKG R +P SRI +
Sbjct: 69 YINSPGGVVTAGLAIYDTMQYVKCPVSTICVGQAASMAAVLLSAGEKGKRICLPHSRIMI 128
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+LR+++ + LS TGQP ++I KD R ++EA+
Sbjct: 129 HQPLGGAQGQASDIEIQAKEILRMKEILNSILSNHTGQPMDRIAKDTDRDFFMSAEEAMA 188
Query: 253 YGLIDRII 260
YG++D++I
Sbjct: 189 YGIVDKVI 196
>gi|452822047|gb|EME29070.1| ATP-dependent Clp protease, protease subunit [Galdieria
sulphuraria]
Length = 273
Score = 176 bits (447), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/222 (41%), Positives = 138/222 (62%), Gaps = 4/222 (1%)
Query: 44 YGRVHKSLYSGIR-NDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFI 102
+ R +SL + R ++ RG I M G PKV Y+ PG+ +++++D++N YRER+I++
Sbjct: 36 FSRFGESLSNCKRQHNYSTRGNIVMGG-GVPKVPYKAPGQQNYEFIDIFNRFYRERIIYV 94
Query: 103 GQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHC 162
GQ IDE+ +NQI+A +L+L S DD V MYIN PGG VTP LA+YD M S++ P+ T
Sbjct: 95 GQEIDEDQANQIIAILLFLQSEDDQAEVQMYINCPGGFVTPGLAVYDCMCSVRYPIVTVN 154
Query: 163 VGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA--ARGQADDIRNEADELLRVRDYI 220
+G A + FL A G G R A+P SR L P +GQA D+ EA ++LR R+ +
Sbjct: 155 LGMAASMGAFLAAAGTPGRRFALPNSRYLLQQPLAPDNIKGQAKDVEIEAVQILRQREML 214
Query: 221 FKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
F+ ++ + Q E+I DL R + EA EYGL+D+++ P
Sbjct: 215 FESYAKFSKQSIERIRDDLRRDLYLTAYEAREYGLVDKVLTP 256
>gi|11467785|ref|NP_050836.1| ATP-dependent Clp protease proteolytic subunit [Nephroselmis
olivacea]
gi|18203460|sp|Q9TL09.1|CLPP_NEPOL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|5880714|gb|AAD54807.1|AF137379_30 proteolytic subunit 2 of clp protease (chloroplast) [Nephroselmis
olivacea]
Length = 208
Score = 176 bits (447), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 87/201 (43%), Positives = 124/201 (61%), Gaps = 1/201 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV YR PGE + QWVDL+N LYR+R++F+GQ + +E SNQ+ M+YL + D S
Sbjct: 1 MPVGVPKVPYRLPGESAPQWVDLYNRLYRQRLLFMGQELGDELSNQLCGIMIYLFAEDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++MYIN PGG VT L ++D + V T CVG A +A +L+GG G R A+P
Sbjct: 61 IPLFMYINSPGGSVTSGLGVFDIATVMMQDVTTICVGIAASMASLVLSGGSTGQRLALPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+R+ + P G +RGQA D+ E+ E+ R+RD + +T Q E I DL+R
Sbjct: 121 ARMMIHQPEGGSRGQASDVMYESSEVERLRDIVVDCYVERTHQSRETIIIDLNRDLFMSP 180
Query: 248 QEALEYGLIDRIIRPPRIKED 268
++A YGLID + P +KE+
Sbjct: 181 RQARSYGLIDAVALPA-VKEE 200
>gi|283794992|ref|YP_003359383.1| ATP-dependent protease subunit (chloroplast) [Olea europaea]
gi|330850767|ref|YP_004376445.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
gi|334700306|ref|YP_004563805.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. cuspidata]
gi|334701912|ref|YP_004564521.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. maroccana]
gi|281428711|gb|ADA69950.1| ATP-dependent protease subunit (chloroplast) [Olea europaea]
gi|291059277|gb|ADD72113.1| clp protease proteolytic subunit [Olea europaea]
gi|328795457|emb|CBR30339.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
gi|334084425|emb|CBR23854.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. cuspidata]
gi|334084511|emb|CBR24647.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
gi|334084597|emb|CBR30431.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. europaea]
gi|334084888|emb|CBS29266.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. maroccana]
gi|334084974|emb|CBJ04322.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. cuspidata]
gi|334085060|emb|CBR23763.1| ATP-dependent Clp protease proteolytic subunit [Olea europaea
subsp. cuspidata]
Length = 196
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A +A F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAVYDTMQFVRPDVHTICMGLAASMASFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|116617132|ref|YP_817507.1| clp protease proteolytic subunit [Coffea arabica]
gi|122153644|sp|A0A360.1|CLPP_COFAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116242188|gb|ABJ89703.1| clp protease proteolytic subunit [Coffea arabica]
Length = 196
Score = 176 bits (446), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|372485833|gb|AEX96553.1| clp protease proteolytic subunit (chloroplast) [Crinum asiaticum]
Length = 204
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|108773205|ref|YP_635771.1| ATP-dependent Clp protease proteolytic subunit [Chara vulgaris]
gi|122237366|sp|Q1ACH6.1|CLPP_CHAVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77157861|gb|ABA61902.1| proteolytic subunit 2 of clp protease [Chara vulgaris]
Length = 219
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/197 (43%), Positives = 125/197 (63%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D+E +NQ++ M+YL+ DDS
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDIYNRLYRERLLFLGQRVDDEIANQLIGIMMYLNGEDDS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++MYIN PGG V +A++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KEMFMYINSPGGSVVAGIAVFDAMQYVGPDVTTICMGMAASMGSFILMGGEMTKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K +TGQP I +D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECLMEAEEVLKLRDCIAKVYMNRTGQPGWVIYRDMDRDIFMS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA YG++D + P
Sbjct: 181 ALEAKSYGIVDLVGEDP 197
>gi|427418188|ref|ZP_18908371.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
gi|425760901|gb|EKV01754.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
Length = 198
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 86/194 (44%), Positives = 121/194 (62%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P V YR PG QW+ ++ L+RER+IF+ + + + +N I+A MLYLDS D S
Sbjct: 1 MPIGIPSVPYRLPGSTYEQWISIYERLFRERIIFLTEEVTDGIANAIVAYMLYLDSDDPS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTM+ +KS V T CVG A + FLL G G R A+P
Sbjct: 61 KPIYLYINSPGGSVTAGMAIYDTMRYIKSEVVTICVGLAASMGSFLLCAGSPGKRLALPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G + QA DI EA+ +++++ + ++ T Q E++ +D R
Sbjct: 121 SRIMIHQPLGGVGQRQATDIEIEANHIVQIKHRLNSLMAEHTNQTIEQVERDTDRDNFMS 180
Query: 247 SQEALEYGLIDRII 260
++EA YGLIDR+I
Sbjct: 181 AEEAKAYGLIDRVI 194
>gi|290489432|gb|ADD31100.1| clp protease proteolytic subunit protein [Antirrhinum majus]
Length = 196
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ++D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLYRERLLFLGQDVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVVPGVAIYDTMQFVRPEVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|372485884|gb|AEX96578.1| clp protease proteolytic subunit (chloroplast) [Sansevieria
trifasciata]
Length = 195
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG PF I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPFWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485823|gb|AEX96548.1| clp protease proteolytic subunit (chloroplast) [Allium fistulosum]
gi|372485825|gb|AEX96549.1| clp protease proteolytic subunit (chloroplast) [Allium cepa]
Length = 204
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELLR+R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLRLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|193237752|dbj|BAG50149.1| ATP-dependent Clp protease proteolytic subunit [Takakia
lepidozioides]
gi|193237765|dbj|BAG50156.1| ATP-dependent Clp protease proteolytic subunit [Takakia
lepidozioides]
Length = 204
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 128/193 (66%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ++D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWIISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG++D +
Sbjct: 181 AEEAKVYGIVDFV 193
>gi|161784217|ref|YP_001595533.1| ATP-dependent protease proteolytic subunit [Lemna minor]
gi|88696795|gb|ABD48520.1| ATP-dependent protease proteolytic subunit [Lemna minor]
Length = 202
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGLID +
Sbjct: 181 ATEAQAYGLIDLV 193
>gi|156085810|ref|XP_001610314.1| ATP-dependent Clp protease proteolytic subunit [Babesia bovis T2Bo]
gi|154797567|gb|EDO06746.1| ATP-dependent Clp protease proteolytic subunit, putative [Babesia
bovis]
Length = 245
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 126/203 (62%)
Query: 64 RIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDS 123
++ M P+G P V Y+ PG ++ D+ LYRER++F+ Q++DE ++N I+ T+L LDS
Sbjct: 43 KLFMTPLGVPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDS 102
Query: 124 VDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRS 183
+ K + +YIN GG T + +YDT++ LKS + T VGF A LLA G G RS
Sbjct: 103 DSNEKPITLYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRS 162
Query: 184 AMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIK 243
A+P SR+ + PAG G A+ IR++A +L ++ + K S+ T QP + I KDL R +
Sbjct: 163 ALPHSRVVMHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTNQPLDNIAKDLEREQ 222
Query: 244 RFGSQEALEYGLIDRIIRPPRIK 266
++E+L+YGL+DRIIR K
Sbjct: 223 FMSAEESLQYGLVDRIIRTDHAK 245
>gi|365873788|ref|ZP_09413321.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
gi|363983875|gb|EHM10082.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermanaerovibrio velox DSM 12556]
Length = 194
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/188 (46%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IFIGQ ID+ +N ++A +L+L+S D K VY+
Sbjct: 6 PYVIEQT-GRGERSY-DIYSRLLKDRIIFIGQEIDDHLANLVVAQLLFLESEDPDKDVYL 63
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ +K PV T C G A +A LLA GE+G R ++P SRI +
Sbjct: 64 YINSPGGVVTAGLAIYDTMQYIKCPVSTICTGQAASMAAVLLAAGERGKRISLPHSRIMI 123
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+LRV++ + LS TGQP E+I +D R + EA
Sbjct: 124 HQPLGGAQGQASDIEIQAREILRVKEILNSILSNHTGQPLERIARDTDRDFFMSADEACA 183
Query: 253 YGLIDRII 260
YG++D++I
Sbjct: 184 YGIVDKVI 191
>gi|372485819|gb|AEX96546.1| clp protease proteolytic subunit (chloroplast) [Manfreda virginica]
Length = 204
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA +G++D +
Sbjct: 181 AKEAQAHGIVDLV 193
>gi|11466727|ref|NP_039323.1| ATP-dependent Clp protease proteolytic subunit [Marchantia
polymorpha]
gi|116525|sp|P12208.1|CLPP_MARPO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|456519|emb|CAA28109.1| unnamed protein product [Marchantia polymorpha]
Length = 203
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 127/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG++D +
Sbjct: 181 AKEAKLYGIVDLV 193
>gi|290489440|gb|ADD31104.1| clp protease proteolytic subunit protein [Ilex cornuta]
Length = 196
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|372485809|gb|AEX96541.1| clp protease proteolytic subunit (chloroplast) [Agapanthus
africanus]
Length = 204
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|156085800|ref|XP_001610309.1| ATP-dependent Clp protease proteolytic subunit [Babesia bovis
T2Bo]
gi|154797562|gb|EDO06741.1| ATP-dependent Clp protease proteolytic subunit , putative [Babesia
bovis]
Length = 200
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 124/200 (62%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M P+G P V Y+ PG ++ D+ LYRER++F+ Q++DE ++N I+ T+L LDS +
Sbjct: 1 MTPLGVPLVEYKIPGTQRSEFHDIHTRLYRERILFVSQSLDESYTNMIIGTLLCLDSDSN 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN GG T + +YDT++ LKS + T VGF A LLA G G RSA+P
Sbjct: 61 EKPITLYINSQGGPSTAGITLYDTIKHLKSKIATINVGFCSATASLLLASGTPGMRSALP 120
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SR+ + PAG G A+ IR++A +L ++ + K S+ T QP + I KDL R +
Sbjct: 121 HSRVVMHQPAGTLEGSAEQIRSQAQYMLNMKRILQKLYSQVTNQPLDNIAKDLEREQFMS 180
Query: 247 SQEALEYGLIDRIIRPPRIK 266
++E+L+YGL+DRIIR K
Sbjct: 181 AEESLQYGLVDRIIRTDHAK 200
>gi|110456628|gb|ABG74755.1| ATP-dependent protease catalytic subunit [Forsythia europaea]
gi|290489438|gb|ADD31103.1| clp protease proteolytic subunit protein [Ehretia acuminata]
Length = 196
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|290489436|gb|ADD31102.1| clp protease proteolytic subunit protein [Dillenia indica]
Length = 196
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDNEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDT+Q ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTIQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWLVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG+ID +
Sbjct: 181 AREAQAYGIIDLV 193
>gi|372485890|gb|AEX96581.1| clp protease proteolytic subunit (chloroplast) [Brodiaea
californica]
gi|372485894|gb|AEX96583.1| clp protease proteolytic subunit (chloroplast) [Dichelostemma
congestum]
gi|372485896|gb|AEX96584.1| clp protease proteolytic subunit (chloroplast) [Dichelostemma
ida-maia]
Length = 204
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/202 (42%), Positives = 126/202 (62%), Gaps = 1/202 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRIIRPPRIKED 268
+ EA +G++D + ED
Sbjct: 181 ATEAQAHGIVDLVAVENENTED 202
>gi|372485835|gb|AEX96554.1| clp protease proteolytic subunit (chloroplast) [Eucharis x
grandiflora]
Length = 204
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485827|gb|AEX96550.1| clp protease proteolytic subunit (chloroplast) [Gilliesia graminea]
Length = 204
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|401879766|gb|AFQ30953.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Salvia miltiorrhiza]
Length = 196
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPEVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + K ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTKVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEARAYGIVDLV 193
>gi|404474550|ref|YP_006666055.1| clp protease proteolytic subunit (chloroplast) [Capsicum annuum]
gi|401065957|gb|AFP90801.1| clp protease proteolytic subunit (chloroplast) [Capsicum annuum]
Length = 196
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE + WVD++N LYRER++F+GQ I+ E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRGPGEANPLWVDVYNRLYRERLLFLGQGINSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWVIPGVAIYDTMQFVRPDVNTVCMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA G Q + EA+ELL++R+ + ++TG+PF +++D+ R
Sbjct: 121 ARVMMHQPASGFYMAQVTECVVEAEELLKLRETLTGVYVQRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|290489458|gb|ADD31113.1| clp protease proteolytic subunit protein [Cornus florida]
Length = 196
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AI+DTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIFDTMQFVQPDVHTICMGMAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA A Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASAYYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|372485829|gb|AEX96551.1| clp protease proteolytic subunit (chloroplast) [Tulbaghia violacea]
gi|372485831|gb|AEX96552.1| clp protease proteolytic subunit (chloroplast) [Amaryllis
belladonna]
Length = 204
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485899|gb|AEX96585.1| clp protease proteolytic subunit (chloroplast) [Xanthorrhoea
preissii]
Length = 204
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|377819404|ref|YP_005097899.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Colocasia esculenta]
gi|340536665|gb|AEK48432.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Colocasia esculenta]
gi|340536752|gb|AEK48518.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Colocasia esculenta]
Length = 202
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG+ID +
Sbjct: 181 ATEAQAYGIIDLV 193
>gi|372485811|gb|AEX96542.1| clp protease proteolytic subunit (chloroplast) [Anemarrhena
asphodeloides]
Length = 204
Score = 174 bits (442), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|383788383|ref|YP_005472952.1| ATP-dependent Clp protease proteolytic subunit [Caldisericum exile
AZM16c01]
gi|381364020|dbj|BAL80849.1| ATP-dependent Clp protease proteolytic subunit [Caldisericum exile
AZM16c01]
Length = 195
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 129/193 (66%), Gaps = 3/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPI P V+ T G G + D+++ L ++R+IF+ I+ ++ I+A +LYL+S+D +
Sbjct: 1 MPI-IPSVV-ETTGRGEVSF-DIYSRLLKDRIIFLTGEIETVHADLIVAELLYLESLDST 57
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+YIN PGG+V P +AIYDTMQ +K+PV T C+G A LA +LA G KG R A+P
Sbjct: 58 QDIYLYINSPGGEVIPGMAIYDTMQYIKAPVATICLGQAASLAAVILAAGRKGKRYALPH 117
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G A+GQA DI +A EL+R++ I + LS+ TGQP EKI +D R
Sbjct: 118 SRILIHQPWGGAQGQATDIEIQAKELIRIKRMINEILSKHTGQPVEKIQRDTERDYFMSP 177
Query: 248 QEALEYGLIDRII 260
+EA EYGLID+II
Sbjct: 178 EEAKEYGLIDQII 190
>gi|372485839|gb|AEX96556.1| clp protease proteolytic subunit (chloroplast) [Aphyllanthes
monspeliensis]
gi|372485876|gb|AEX96574.1| clp protease proteolytic subunit (chloroplast) [Eriospermum
cervicorne]
gi|372485882|gb|AEX96577.1| clp protease proteolytic subunit (chloroplast) [Ruscus aculeatus]
Length = 204
Score = 174 bits (441), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|449326903|gb|AGE93480.1| clp protease proteolytic subunit [Xiphidium caeruleum]
Length = 204
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDNEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGKPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQTHGIVDLV 193
>gi|456061910|ref|YP_007476072.1| clp protease proteolytic subunit [Dasypogon bromeliifolius]
gi|449326555|gb|AGE93136.1| clp protease proteolytic subunit [Dasypogon bromeliifolius]
Length = 204
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 129/203 (63%), Gaps = 1/203 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG PF +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRIIRPPRIKEDM 269
+ EA +G++D + + ED+
Sbjct: 181 ATEAQAHGIVDLVAVENQNTEDL 203
>gi|387773849|ref|ZP_10129134.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
gi|386903670|gb|EIJ68477.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
parahaemolyticus HK385]
Length = 197
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 128/190 (67%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +
Sbjct: 4 VPMVVEQTPKGERSY---DIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R +QEA
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAQEA 180
Query: 251 LEYGLIDRII 260
+EYGLID+++
Sbjct: 181 MEYGLIDKVL 190
>gi|290489466|gb|ADD31117.1| clp protease proteolytic subunit protein [Heuchera sanguinea]
Length = 196
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|290489454|gb|ADD31111.1| clp protease proteolytic subunit protein [Berberidopsis corallina]
Length = 196
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KNLYLFINSPGGWVIPGVAIYDTMQFVRPNVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELLR+R+ + + +++TG+ +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLRLRESLTRVYAQRTGKSLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQTHGIVDLV 193
>gi|108796681|ref|YP_636469.1| ATP-dependent Clp protease proteolytic subunit [Zygnema
circumcarinatum]
gi|122211761|sp|Q32RQ7.1|CLPP_ZYGCR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|61393665|gb|AAX45807.1| proteolytic subunit 2 of clp protease [Zygnema circumcarinatum]
Length = 211
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 127/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYR+R++F+GQ++D+E +NQ++ M+YL+ + S
Sbjct: 1 MPIGVPKVPFRIPGEEDASWIDVYNRLYRDRLLFLGQDVDDEIANQLIGIMIYLNGENQS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYMYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEISKRLALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L+++D + K ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEGQAGECMIEAEEVLKLKDCVTKVYMQRTGKPMAVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG++D +
Sbjct: 181 AKEAQAYGIVDLV 193
>gi|290489448|gb|ADD31108.1| clp protease proteolytic subunit protein [Nerium oleander]
Length = 196
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQAVDSEISNQLIGLMIYLSIEDDN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|372485888|gb|AEX96580.1| clp protease proteolytic subunit (chloroplast) [Androstephium
coeruleum]
Length = 204
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 85/202 (42%), Positives = 126/202 (62%), Gaps = 1/202 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWIISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRIIRPPRIKED 268
+ EA +G++D + ED
Sbjct: 181 ATEAQAHGIVDLVAVENENTED 202
>gi|160332321|sp|P56772.2|CLPP1_ARATH RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase ClpP1; Short=pClpP
Length = 196
Score = 174 bits (440), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|139387277|ref|YP_001123398.1| ATP-dependent Clp protease proteolytic subunit [Capsella
bursa-pastoris]
gi|139390177|ref|YP_001123750.1| ATP-dependent Clp protease proteolytic subunit [Lobularia maritima]
gi|160380546|sp|A4QKL7.1|CLPP_CAPBU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380557|sp|A4QLL9.1|CLPP_LOBMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286598|dbj|BAF50222.1| ATP-dependent protease subunit [Capsella bursa-pastoris]
gi|134286954|dbj|BAF50574.1| ATP-dependent protease subunit [Lobularia maritima]
Length = 196
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485849|gb|AEX96561.1| clp protease proteolytic subunit (chloroplast) [Asphodeline
damascena]
Length = 204
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEADAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y +IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDIYFFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|11465983|ref|NP_054525.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana tabacum]
gi|78102563|ref|YP_358703.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana
sylvestris]
gi|81301593|ref|YP_398889.1| ATP-dependent Clp protease proteolytic subunit [Nicotiana
tomentosiformis]
gi|351653910|ref|YP_004891632.1| clpP gene product (chloroplast) [Nicotiana undulata]
gi|116527|sp|P12210.1|CLPP_TOBAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122212889|sp|Q33C07.1|CLPP_NICTO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122213564|sp|Q3C1K4.1|CLPP_NICSY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1143166|gb|AAA84867.1| ClpP protease [Nicotiana tabacum]
gi|2924270|emb|CAA77422.1| ATP-dependent protease proteolytic subuni [Nicotiana tabacum]
gi|77799590|dbj|BAE46679.1| ATP-dependent protease proteolytic subunit [Nicotiana sylvestris]
gi|80750952|dbj|BAE48028.1| ATP-dependent protease proteolytic subunit [Nicotiana
tomentosiformis]
gi|347453936|gb|AEO95594.1| clp protease proteolytic subunit (chloroplast) [Nicotiana undulata]
gi|347454047|gb|AEO95704.1| clp protease proteolytic subunit [synthetic construct]
Length = 196
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|334701643|ref|YP_004564028.1| ATP-dependent Clp protease proteolytic subunit [Olea woodiana
subsp. woodiana]
gi|334084683|emb|CBS29376.1| ATP-dependent Clp protease proteolytic subunit [Olea woodiana
subsp. woodiana]
Length = 196
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYD+MQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDSMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|383930465|ref|YP_005089977.1| clpP gene product (chloroplast) [Brassica napus]
gi|262400762|gb|ACY66251.1| ATP-dependent Clp protease proteolytic subunit [Brassica napus]
Length = 196
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD+ N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIINRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGEITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q ++ EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEVILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485878|gb|AEX96575.1| clp protease proteolytic subunit (chloroplast) [Liriope spicata]
Length = 205
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|394831126|ref|YP_006503816.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Datura stramonium]
gi|350996451|gb|AEQ36963.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Datura stramonium]
gi|350996537|gb|AEQ37048.1| ATP-dependent Clp protease proteolytic subunit [Datura stramonium]
Length = 198
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 85/195 (43%), Positives = 124/195 (63%), Gaps = 3/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +RTPGE WVD++N LYRER++F+GQ I E SNQ++A M+YL D++
Sbjct: 1 MPIGVPKVPFRTPGEEESSWVDIYNRLYRERLLFLGQGITSELSNQLIALMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP- 186
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWVLPGVAIYDTMQFVRPDVHTVCIGLAASMGSFILVGGEITKRIAFPH 120
Query: 187 -LSRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+ R+ + P G R Q + EA ELL++R+ + + ++TG+P +++DL R
Sbjct: 121 AIIRVMMHQPGTGYYRAQVGEFILEAAELLKLRETLTRVYVQRTGKPLWVVSEDLERDVF 180
Query: 245 FGSQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 MSATEAQAYGIVDLV 195
>gi|372485886|gb|AEX96579.1| clp protease proteolytic subunit (chloroplast) [Maianthemum
stellatum]
Length = 204
Score = 173 bits (439), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|34501388|ref|NP_904176.1| ATP-dependent Clp protease proteolytic subunit [Physcomitrella
patens subsp. patens]
gi|68052159|sp|Q6YXM7.1|CLPP_PHYPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34494758|dbj|BAC85025.1| ATP-dependent protease proteolytic subunit [Physcomitrella patens
subsp. patens]
Length = 199
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 129/194 (66%), Gaps = 2/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNA-LYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG PKV +R PGE W+D++N LYRER++F+GQ++D+E +NQ++ M+YL+ D+
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNNRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDE 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K +Y+YIN PGG V +++YD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 NKDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILAGGEITKRIALP 120
Query: 187 LSRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+R+ + PA + GQA + EA+E+L++RDYI + ++ G+P I++D+ R
Sbjct: 121 HARVMIHQPASSYYDGQAGECIMEAEEVLKLRDYITRVYVQRIGKPLWVISEDMERDVFM 180
Query: 246 GSQEALEYGLIDRI 259
+QEA YG++D +
Sbjct: 181 SAQEAKTYGIVDLV 194
>gi|372485880|gb|AEX96576.1| clp protease proteolytic subunit (chloroplast) [Ophiopogon
japonicus]
Length = 197
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|91214166|ref|YP_538790.1| ATP-dependent Clp protease proteolytic subunit [Glycine max]
gi|122202485|sp|Q2PMR0.1|CLPP_SOYBN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83595767|gb|ABC25148.1| clp protease proteolytic subunit [Glycine max]
Length = 196
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 127/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE WVD++N LYRER++F+GQ +D E SNQ+++ M+YL +++
Sbjct: 1 MPIGVPRVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLISLMVYLSIEEEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKMRETITRVYVQRTGKPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|28261742|ref|NP_783256.1| ATP-dependent Clp protease proteolytic subunit [Atropa belladonna]
gi|75303626|sp|Q8S8W2.1|CLPP_ATRBE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|20068356|emb|CAC88069.1| ATP-dependent protease; catalytic subunit [Atropa belladonna]
Length = 196
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ I+ E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQGINSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWVIPGIAIYDTMQFVRPDVHTVCMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA G Q + EA+ELL++R+ + + ++TG+P +++D+ +
Sbjct: 121 ARVMMHQPASGYYEAQTGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMEKDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|374249562|ref|YP_005088832.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Millettia pinnata]
gi|356474851|gb|AET11369.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Millettia pinnata]
Length = 196
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +RTPG+G WVD++N LYRER++F+GQ +D + SNQ++ MLYL D+
Sbjct: 1 MPIGVPKVSFRTPGDGDASWVDIYNRLYRERLLFLGQEVDSQLSNQLIGIMLYLSIESDN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +++N PGG V P LAI+DTMQ ++ V T C+G A + FLLA GE R A P
Sbjct: 61 KDLCLFVNSPGGWVIPGLAIFDTMQYIEPDVQTVCMGLAASMGSFLLAAGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + +++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFIREAEELLKLRETITRVYAQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G+ID +
Sbjct: 181 AVEAQAHGIIDIV 193
>gi|11466963|ref|NP_054384.1| ATP-dependent Clp protease proteolytic subunit [Epifagus
virginiana]
gi|231812|sp|P30063.1|CLPP_EPIVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|336919|gb|AAA65858.1| protease [Epifagus virginiana]
Length = 196
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV ++ PGE WVD++N LYRER++F+GQ +D + SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFQIPGEEDASWVDVYNRLYRERLLFLGQEVDSDISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 61 KEIYLFINSPGGWVIPGVAIYDTMQFVRPEVHTICMGLAASMGSFLLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARG-QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA G Q + EA+ELL++R+ + + ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASYFFGAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+++A YG++D +
Sbjct: 181 AKDAQAYGIVDLV 193
>gi|372485841|gb|AEX96557.1| clp protease proteolytic subunit (chloroplast) [Asparagus
officinalis]
gi|372485843|gb|AEX96558.1| clp protease proteolytic subunit (chloroplast) [Asparagus
asparagoides]
gi|372485845|gb|AEX96559.1| clp protease proteolytic subunit (chloroplast) [Hemiphylacus
alatostylus]
gi|372485874|gb|AEX96573.1| clp protease proteolytic subunit (chloroplast) [Dasylirion
wheeleri]
Length = 204
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485847|gb|AEX96560.1| clp protease proteolytic subunit (chloroplast) [Aloe vera]
Length = 204
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDIYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485851|gb|AEX96562.1| clp protease proteolytic subunit (chloroplast) [Haworthia
cymbiformis]
Length = 204
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDIYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|449326642|gb|AGE93222.1| clp protease proteolytic subunit [Calectasia narragara]
Length = 204
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/203 (40%), Positives = 128/203 (63%), Gaps = 1/203 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRIIRPPRIKEDM 269
+ EA +G++D + + ED+
Sbjct: 181 ATEAQAHGIVDLVAVENQTTEDL 203
>gi|372485892|gb|AEX96582.1| clp protease proteolytic subunit (chloroplast) [Dichelostemma
capitatum]
Length = 204
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + E +ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEVEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485859|gb|AEX96566.1| clp protease proteolytic subunit (chloroplast) [Bowiea volubilis]
Length = 204
Score = 173 bits (438), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEIAKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485853|gb|AEX96563.1| clp protease proteolytic subunit (chloroplast) [Kniphofia
linearifolia]
Length = 204
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDIYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485863|gb|AEX96568.1| clp protease proteolytic subunit (chloroplast) [Ledebouria
cordifolia]
Length = 204
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|13518463|ref|NP_084822.1| ATP-dependent Clp protease proteolytic subunit [Lotus japonicus]
gi|18202721|sp|Q9BBQ9.1|CLPP_LOTJA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13359004|dbj|BAB33221.1| ATP-dependent protease subunit [Lotus japonicus]
Length = 196
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ ++ E SNQ++ M+YL DD
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVNSEISNQLIGLMVYLSIEDDK 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGG+ R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCMGLAASMGSFVLAGGKITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWLVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 AAEAQAYGIVDLV 193
>gi|443267251|ref|YP_007374823.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ophioglossum californicum]
gi|441017952|gb|AGC26736.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Ophioglossum californicum]
Length = 204
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDVYNRLHRERLLFLGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P ++IYD MQ + V T C+G A + F+ GGE R A+P
Sbjct: 61 KNMYSYINSPGGAVLPGISIYDAMQFVVPDVHTICMGLAASMGSFISTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K +++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYAQRTGRPLWVISEDMERDAFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 AGEAKAYGIVDLV 193
>gi|159161186|ref|YP_001542472.1| clp protease proteolytic subunit [Ceratophyllum demersum]
gi|148508469|gb|ABQ81476.1| clp protease proteolytic subunit [Ceratophyllum demersum]
gi|227481143|emb|CAP62522.1| ATP-dependent protease proteolytic subunit [Ceratophyllum demersum]
Length = 202
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ ID E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLYRERLLFLGQEIDSEMSNQIVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIALYDTMQFVPPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|78103274|ref|YP_358605.1| ATP-dependent Clp protease proteolytic subunit [Phalaenopsis
aphrodite subsp. formosana]
gi|122213418|sp|Q3BAL3.1|CLPP_PHAAO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|58802804|gb|AAW82524.1| ATP-dependent Clp protease proteolytic subunit [Phalaenopsis
aphrodite subsp. formosana]
Length = 204
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA D EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQARDFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|392841363|gb|AFM83318.1| clp protease proteolytic subunit (chloroplast) [Kingia australis]
Length = 204
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 127/203 (62%), Gaps = 1/203 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRIIRPPRIKEDM 269
+ EA +G++D + + ED
Sbjct: 181 ATEAQAHGIVDLVAVENQNTEDF 203
>gi|166235861|gb|ABY85762.1| ATP-dependent protease proteolytic subunit [Silene aegyptiaca]
gi|166235883|gb|ABY85783.1| ATP-dependent protease proteolytic subunit [Silene atocioides]
Length = 196
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|374249729|ref|YP_005089358.1| clpP gene product (chloroplast) [Silene vulgaris]
gi|166235619|gb|ABY85531.1| ATP-dependent protease proteolytic subunit [Silene uniflora]
gi|166235751|gb|ABY85657.1| ATP-dependent protease proteolytic subunit [Silene cryptoneura]
gi|166235839|gb|ABY85741.1| ATP-dependent protease proteolytic subunit [Silene schafta]
gi|166240002|gb|ABY86529.1| ATP-dependent protease proteolytic subunit [Heliosperma alpestre]
gi|329755711|gb|AEC04272.1| clp protease proteolytic subunit (chloroplast) [Silene vulgaris]
Length = 196
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|167391831|ref|YP_001671708.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
gi|166344158|gb|ABY86808.1| ATP-dependent Clp protease proteolytic subunit [Carica papaya]
Length = 196
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIESDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQVGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|91208926|ref|YP_538961.1| ATP-dependent Clp protease proteolytic subunit [Gossypium hirsutum]
gi|372291056|ref|YP_005087814.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium darwinii]
gi|372291410|ref|YP_005088305.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium tomentosum]
gi|372291508|ref|YP_005088401.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium herbaceum subsp. africanum]
gi|372291798|ref|YP_005088941.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium mustelinum]
gi|372291882|ref|YP_005089024.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium arboreum]
gi|386800862|ref|YP_006303516.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium gossypioides]
gi|394830651|ref|YP_006503302.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium incanum]
gi|394830824|ref|YP_006503468.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium capitis-viridis]
gi|394831000|ref|YP_006503634.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium robinsonii]
gi|122201402|sp|Q2L926.1|CLPP_GOSHI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85687440|gb|ABC73652.1| clp protease proteolytic subunit [Gossypium hirsutum]
gi|318084341|gb|ADV38817.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium arboreum]
gi|318084424|gb|ADV38899.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium darwinii]
gi|318084509|gb|ADV38983.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium herbaceum subsp. africanum]
gi|318084593|gb|ADV39066.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium mustelinum]
gi|318084761|gb|ADV39232.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium tomentosum]
gi|329317096|gb|AEB90455.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium gossypioides]
gi|329317180|gb|AEB90538.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium hirsutum]
gi|329317264|gb|AEB90621.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium hirsutum]
gi|329317348|gb|AEB90704.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium barbadense]
gi|329317432|gb|AEB90787.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium barbadense]
gi|329317516|gb|AEB90870.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium barbadense]
gi|335354356|gb|AEH42976.1| ATP-dependent Clp protease proteolytic subunit [Gossypium incanum]
gi|335354524|gb|AEH43142.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium capitis-viridis]
gi|335354692|gb|AEH43308.1| ATP-dependent Clp protease proteolytic subunit [Gossypium
robinsonii]
Length = 196
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485861|gb|AEX96567.1| clp protease proteolytic subunit (chloroplast) [Drimia altissima]
gi|372485865|gb|AEX96569.1| clp protease proteolytic subunit (chloroplast) [Ornithogalum
tenuifolium]
Length = 204
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINTPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++DL R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDLERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|119368524|ref|YP_913212.1| ATP-dependent protease proteolytic subunit [Gossypium barbadense]
gi|125863802|sp|A0ZZ60.1|CLPP_GOSBA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119224886|dbj|BAF41272.1| ATP-dependent protease proteolytic subunit [Gossypium barbadense]
Length = 196
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERNVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|298710838|emb|CBJ26347.1| ATP-dependent Clp protease, proteolytic subunit [Ectocarpus
siliculosus]
Length = 237
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/240 (40%), Positives = 131/240 (54%), Gaps = 35/240 (14%)
Query: 28 SPSVFGTG--KPNL----SAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPG 81
SPS F TG P L + GR ++ Y + K MMPIG PKV YR PG
Sbjct: 23 SPSAFMTGTMSPGLRTPGATSALGREART-YRRLSTAKSGAASTVMMPIGVPKVAYRVPG 81
Query: 82 EGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDV 141
+ WVD++N LYRER+IF+GQ ID+E +NQI+ +LYLDS D +K +Y+Y+N PGG V
Sbjct: 82 APTADWVDIYNRLYRERIIFLGQEIDDELANQIIGVLLYLDSEDSTKPIYLYVNCPGGSV 141
Query: 142 TPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARG 201
LA++DTMQ ++S V T VG A +A F+LA G K
Sbjct: 142 IAGLALFDTMQHIRSEVVTINVGLAASMASFILAAGAK---------------------- 179
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
EA +++ +RD I + + TGQ E+IT DL R +Q A +YGL+D +I+
Sbjct: 180 ------VEATQIMHIRDNIVRMYAMMTGQTQEQITIDLDRDNFMSAQAAADYGLVDNVIK 233
>gi|139389121|ref|YP_001123839.1| ATP-dependent Clp protease proteolytic subunit [Nasturtium
officinale]
gi|160380558|sp|A4QLV8.1|CLPP_NASOF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134287044|dbj|BAF50663.1| ATP-dependent protease subunit [Nasturtium officinale]
Length = 196
Score = 172 bits (436), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +A+YDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAVYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL+VR+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKVRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|91984016|ref|YP_567102.1| ATP-dependent Clp protease proteolytic subunit [Vitis vinifera]
gi|122230336|sp|Q0ZIZ4.1|CLPP_VITVI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91701674|gb|ABE47558.1| clp protease proteolytic subunit [Vitis vinifera]
Length = 196
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ ++ E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRNPGEDDISWIDVYNRLYRERLLFLGQEVESEISNQLIGLMIYLSIEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y +IN PGG V P +AIYDTMQ + V T C+G A + F+L GG R A P
Sbjct: 61 KDLYFFINSPGGWVLPGIAIYDTMQFVPPEVHTICLGLAASMGSFILVGGTITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA A QA + EA+ELL++R+ I K ++TG+P +++DL R
Sbjct: 121 ARVMIHQPAAAFYEAQAGEFVMEAEELLKLREIITKVYVQRTGKPLWVVSEDLERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQTHGIVDLV 193
>gi|7525058|ref|NP_051083.1| ATP-dependent Clp protease proteolytic subunit [Arabidopsis
thaliana]
gi|5360576|dbj|BAA82063.1| pClpP [Arabidopsis thaliana]
gi|5881719|dbj|BAA84410.1| ATP-dependent protease subunit [Arabidopsis thaliana]
Length = 196
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|456061794|ref|YP_007475986.1| clp protease proteolytic subunit [Bismarckia nobilis]
gi|449326468|gb|AGE93050.1| clp protease proteolytic subunit [Bismarckia nobilis]
Length = 204
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQVHGIVDLV 193
>gi|18860336|ref|NP_569653.1| ATP-dependent Clp protease proteolytic subunit [Psilotum nudum]
gi|22653694|sp|Q8WHZ7.1|CLPP_PSINU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|18389489|dbj|BAB84241.1| ATP-dependent protease [Psilotum nudum]
gi|441018042|gb|AGC26818.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Psilotum nudum]
Length = 198
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 127/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAGWVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y YIN PGG V P +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 RDMYSYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I + +++T +P I++D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEILKLRDCITRVYAQRTEKPLWVISEDMERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG++D I
Sbjct: 181 AKEARAYGIVDLI 193
>gi|290489476|gb|ADD31122.1| clp protease proteolytic subunit protein [Staphylea colchica]
Length = 196
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V ++ PGEG W+D++N LYRER++F+GQ +D SN ++A M+YL D+
Sbjct: 1 MPIGVPRVPFQLPGEGFVSWIDIYNRLYRERLLFLGQMVDTVISNHLIALMVYLTLESDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+GFA + FLL GG+ R A P
Sbjct: 61 KDLYLFINSPGGWVMPGIAIYDTMQFVRPDVQTICMGFAASMGSFLLVGGKITKRIAFPH 120
Query: 188 SRIALDSPAGAARG-QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA A G Q + EA+ELL++R+ + +++TG+P +++D+ R
Sbjct: 121 ARVMIHQPAAAFYGAQTGEFVLEAEELLKLREIMTSIYAQRTGKPLWVVSEDMERDTFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +GL+D +
Sbjct: 181 ATEAQAHGLVDLV 193
>gi|296936697|gb|ADH94369.1| photosystem II CP47 chlorophyll apoprotein [Syzygium cumini]
Length = 196
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|292559570|ref|YP_003540956.1| clpP-like protease [Phoenix dactylifera]
gi|290790978|gb|ADD63233.1| clpP-like protease (chloroplast) [Phoenix dactylifera]
gi|294620602|gb|ADF28171.1| clpP-like protease (chloroplast) [Phoenix dactylifera]
Length = 204
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQVHGIVDLV 193
>gi|139388935|ref|YP_001123662.1| ATP-dependent Clp protease proteolytic subunit [Lepidium
virginicum]
gi|160380556|sp|A4QLD1.1|CLPP_LEPVR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286865|dbj|BAF50486.1| ATP-dependent protease subunit [Lepidium virginicum]
Length = 196
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ++D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQDVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|394830738|ref|YP_006503385.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium somalense]
gi|394830913|ref|YP_006503551.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium areysianum]
gi|335354440|gb|AEH43059.1| ATP-dependent Clp protease proteolytic subunit [Gossypium
somalense]
gi|335354608|gb|AEH43225.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium areysianum]
Length = 196
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVHPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|114107157|ref|YP_740142.1| clp protease proteolytic subunit [Daucus carota]
gi|323149107|ref|YP_004222671.1| clp protease proteolytic subunit [Anthriscus cerefolium]
gi|122239962|sp|Q0G9T7.1|CLPP_DAUCA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113200932|gb|ABI32448.1| clp protease proteolytic subunit [Daucus carota]
gi|289645600|gb|ADD13663.1| clp protease proteolytic subunit [Anthriscus cerefolium]
Length = 197
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++T +P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTDKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|372485867|gb|AEX96570.1| clp protease proteolytic subunit (chloroplast) [Oziroe biflora]
Length = 204
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 VRVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|156573693|gb|ABU85179.1| clp protease proteolytic subunit [Anethum graveolens]
Length = 197
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++T +P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTDKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|371926699|gb|AEX58480.1| clp protease proteolytic subunit (chloroplast) [Theobroma
grandiflorum]
Length = 196
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|166235597|gb|ABY85510.1| ATP-dependent protease proteolytic subunit [Silene littorea]
Length = 196
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ ++ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVESEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRXTLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 AAEAQAYGIVDLV 193
>gi|139388119|ref|YP_001123311.1| ATP-dependent protease subunit [Barbarea verna]
gi|139389443|ref|YP_001123140.1| ATP-dependent Clp protease proteolytic subunit [Olimarabidopsis
pumila]
gi|139389826|ref|YP_001123487.1| ATP-dependent Clp protease proteolytic subunit [Crucihimalaya
wallichii]
gi|404474636|ref|YP_006666317.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Pachycladon enysii]
gi|160380544|sp|A4QKD0.1|CLPP_BARVE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380548|sp|A4QKV6.1|CLPP_CRUWA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380560|sp|A4QJV6.1|CLPP_OLIPU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286337|dbj|BAF49964.1| ATP-dependent protease subunit [Olimarabidopsis pumila]
gi|134286510|dbj|BAF50135.1| ATP-dependent protease subunit [Barbarea verna]
gi|134286688|dbj|BAF50311.1| ATP-dependent protease subunit [Crucihimalaya wallichii]
gi|401786751|gb|AFQ07817.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Pachycladon enysii]
Length = 196
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|108802666|ref|YP_636324.1| ATP-dependent Clp protease proteolytic subunit [Eucalyptus globulus
subsp. globulus]
gi|122219170|sp|Q49KX3.1|CLPP_EUCGG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|60460832|gb|AAX21052.1| photosystem II CP47 chlorophyll apoprotein [Eucalyptus globulus
subsp. globulus]
Length = 196
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|383930606|ref|YP_005352976.1| clpP gene product (chloroplast) [Mankyua chejuensis]
gi|325975872|gb|ADZ48008.1| clp protease proteolytic subunit [Mankyua chejuensis]
Length = 202
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ WVD+ N LYRER++F+GQ +D+E +NQ++ M+YL+ DD+
Sbjct: 1 MPIGVPKVPFRLPGDEDAGWVDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDDN 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y YIN PGG V P ++IYD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 RNMYSYINSPGGAVLPGISIYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K +++TG+P I++D+ R
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYAQRTGKPLWVISEDMERDAFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 180 AAEAKAYGIVDLV 192
>gi|313199727|ref|YP_004021341.1| clp protease proteolytic subunit [Theobroma cacao]
gi|309321291|gb|ADO64834.1| clp protease proteolytic subunit [Theobroma cacao]
gi|328924805|gb|ADO64915.2| clp protease proteolytic subunit [Theobroma cacao]
gi|371925961|gb|AEX57751.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926043|gb|AEX57832.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926125|gb|AEX57913.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926207|gb|AEX57994.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926289|gb|AEX58075.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926371|gb|AEX58156.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926453|gb|AEX58237.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926535|gb|AEX58318.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926617|gb|AEX58399.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
gi|371926781|gb|AEX58561.1| clp protease proteolytic subunit (chloroplast) [Theobroma cacao]
Length = 196
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG + P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KELYLFINSPGGWIIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|376295039|ref|YP_005166269.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
gi|323457600|gb|EGB13465.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
desulfuricans ND132]
Length = 202
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/192 (44%), Positives = 123/192 (64%), Gaps = 2/192 (1%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+ P V+ T G + D+++ L ++R+I +G ID+ ++ I A +L+L+S D K
Sbjct: 2 VAIPMVI-ETTGRTERAY-DIYSRLLKDRIILLGTAIDDHVASLICAQLLFLESEDPEKE 59
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+YMYIN PGG VT +AIYDTMQ + +PV T C+G A +A LL GEKG R ++P SR
Sbjct: 60 IYMYINSPGGVVTSGMAIYDTMQYISAPVATLCMGQAASMASLLLCAGEKGMRYSLPHSR 119
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P G A+GQA DI A E+LR++D + ++R TGQ EKIT D R S+E
Sbjct: 120 ILIHQPLGGAQGQASDISIHAKEILRMKDELNGIMARHTGQSIEKITADTDRDYFMSSEE 179
Query: 250 ALEYGLIDRIIR 261
ALEYGLID++++
Sbjct: 180 ALEYGLIDKVMK 191
>gi|456061475|ref|YP_007475644.1| clp protease proteolytic subunit [Heliconia collinsiana]
gi|449326122|gb|AGE92708.1| clp protease proteolytic subunit [Heliconia collinsiana]
Length = 204
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|60117170|ref|YP_209504.1| ATP-dependent Clp protease proteolytic subunit [Huperzia lucidula]
gi|68052074|sp|Q5SD28.1|CLPP_HUPLU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|50659978|gb|AAT80700.1| ATP-dependent protease (chloroplast) [Huperzia lucidula]
Length = 209
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ W+D++N L+RER++F+GQ +D+E +NQ++ M+Y + DDS
Sbjct: 1 MPIGVPKVPFRLPGDEDAVWIDVYNRLFRERLLFLGQQVDDELANQLICIMIYPNGEDDS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+Y+N PGG V ++IYD MQ + V T C+G A + F+LAGGE R A+P
Sbjct: 61 RDMYLYVNSPGGAVFAGISIYDAMQFVVPDVQTICIGLAASMGSFVLAGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQ + EA+E+L++RD I K +++TG+P +++D R
Sbjct: 121 ARVMIHQPASSYYEGQVGECIMEAEEVLKIRDCITKVYAQRTGKPLWVVSEDTERDVFTS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG+ID +
Sbjct: 181 AEEAKVYGVIDPV 193
>gi|386388774|ref|ZP_10073627.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
gi|385697288|gb|EIG27723.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus paraphrohaemolyticus HK411]
Length = 197
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 127/190 (66%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +
Sbjct: 4 VPMVVEQTPKGERSY---DIFSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G ARGQA DI+ +A E+L++++ + ++++ +GQ FEK+ D R +QEA
Sbjct: 121 MIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQSFEKVAADTERDNFMSAQEA 180
Query: 251 LEYGLIDRII 260
+EYGLID+++
Sbjct: 181 MEYGLIDKVL 190
>gi|357000305|gb|AET48171.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
heldreichii]
gi|357000450|gb|AET48314.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
halepensis]
Length = 196
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI K +TGQP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGQPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|223931051|ref|YP_002586911.1| clp protease proteolytic subunit (chloroplast) [Syntrichia ruralis]
gi|219562265|gb|ACL27596.1| clp protease proteolytic subunit (chloroplast) [Syntrichia ruralis]
Length = 197
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 127/193 (65%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDV-NRLYRERLLFLGQHVDDEIANQLIGIMMYLNGEDES 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RDYI + ++ G+P I++D+ R
Sbjct: 120 ARVMIHQPASSYYDGQAGECMMEAEEVLKLRDYITRVYVQRIGKPLWLISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
++EA YG++D +
Sbjct: 180 AKEAKTYGIVDAV 192
>gi|456330916|ref|YP_007475900.1| clp protease proteolytic subunit [Calamus caryotoides]
gi|449326381|gb|AGE92964.1| clp protease proteolytic subunit [Calamus caryotoides]
Length = 204
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ ID E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEIDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|372485837|gb|AEX96555.1| clp protease proteolytic subunit (chloroplast) [Scadoxus
cinnabarinus]
Length = 204
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDYT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|428775586|ref|YP_007167373.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428689865|gb|AFZ43159.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 199
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/188 (44%), Positives = 122/188 (64%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ +D+E +N I+A MLYL++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQQVDDEIANLIVAQMLYLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ GEKG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICLGLAASMGAFLLSAGEKGKRLSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + L+ TGQP ++I +D R QE++E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQQLNHYLAEHTGQPLDRIAEDTERDFFMSPQESME 180
Query: 253 YGLIDRII 260
YGLIDR+I
Sbjct: 181 YGLIDRVI 188
>gi|290489468|gb|ADD31118.1| clp protease proteolytic subunit protein [Liquidambar styraciflua]
Length = 196
Score = 171 bits (433), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ I+ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDASWVDVYNRLYRERLLFLGQEINSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG + P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 61 KDLYLFINSPGGWLIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGKITKRIAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P + Q + EA+ELL++R+ I + +++TG+PF +++D+ R
Sbjct: 121 ARVMIHQPGSSYFEAQTGEFILEAEELLKLRETITRVYAQRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|306486008|gb|ADM92652.1| clp protease proteolytic subunit protein [Davidia involucrata]
Length = 195
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + +++TG+P +++DL R
Sbjct: 120 ARVMIHQPASSYYEAQTGEFILEAEELLKLRETLTRVYAQRTGKPLWVVSEDLERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 180 ATEAKAYGIVDLV 192
>gi|295311752|ref|YP_003587490.1| Clp protease proteolytic subunit [Oncidium Gower Ramsey]
gi|281188266|gb|ACT83132.1| Clp protease proteolytic subunit [Oncidium Gower Ramsey]
Length = 203
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G+++ +
Sbjct: 181 ATEAQAHGIVNLV 193
>gi|377829899|ref|YP_005296125.1| clpP gene product (chloroplast) [Pentactina rupicola]
gi|371532647|gb|AEX31757.1| clp protease proteolytic subunit (chloroplast) [Pentactina
rupicola]
Length = 196
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPRVPFRSPGEEDALWIDVYNRLYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|290489446|gb|ADD31107.1| clp protease proteolytic subunit protein [Nelumbo nucifera]
Length = 202
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|290489474|gb|ADD31121.1| clp protease proteolytic subunit protein [Quercus nigra]
Length = 196
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYR R++F+GQ +D + SNQI+ M+YL DDS
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRARLLFLGQEVDSDLSNQIIGLMVYLSLEDDS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASIGSFLLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + A + EA+E++++R+ I + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAPAGEFILEAEEMMKLRETITRVYVQRTGTPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDHV 193
>gi|428779425|ref|YP_007171211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428693704|gb|AFZ49854.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 199
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 85/188 (45%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER+IF+GQ +D+E N I+A MLYL++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIIFLGQQVDDEIGNLIVAQMLYLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQVRPDVSTICLGLAASMGAFLLSAGAKGKRLSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + LS TGQP E+I +D R QE++E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQQLNHYLSEHTGQPLERIEEDTERDFFMSPQESME 180
Query: 253 YGLIDRII 260
YGLIDR+I
Sbjct: 181 YGLIDRVI 188
>gi|190150599|ref|YP_001969124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|303252091|ref|ZP_07338260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|307248303|ref|ZP_07530328.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|307263943|ref|ZP_07545546.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
gi|226706435|sp|B3H252.1|CLPP_ACTP7 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189915730|gb|ACE61982.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 7 str. AP76]
gi|302649073|gb|EFL79260.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. 4226]
gi|306855173|gb|EFM87351.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 2 str. S1536]
gi|306870705|gb|EFN02446.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 13 str. N273]
Length = 196
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/202 (41%), Positives = 131/202 (64%), Gaps = 6/202 (2%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + + GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++
Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K +Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A
Sbjct: 55 DPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFA 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R
Sbjct: 115 LPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNF 174
Query: 245 FGSQEALEYGLIDRIIRPPRIK 266
+ EA+EYGLID+++ IK
Sbjct: 175 MSAVEAMEYGLIDKVLTHRDIK 196
>gi|228017007|gb|ACP51830.1| ATP-dependent Clp protease proteolytic subunit [Pinus canariensis]
gi|228017448|gb|ACP52264.1| ATP-dependent Clp protease proteolytic subunit [Pinus merkusii]
gi|356997903|gb|AET45802.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
roxburghii]
gi|356999940|gb|AET47811.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
latteri]
Length = 196
Score = 170 bits (431), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI K +TGQP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGQPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|237688522|ref|YP_002905140.1| ATP-dependent Clp protease proteolytic subunit [Pinus contorta]
gi|226875351|gb|ACO89089.1| ATP-dependent Clp protease proteolytic subunit [Pinus contorta]
Length = 205
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 123/199 (61%), Gaps = 1/199 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +R+YI + +TGQP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLLREYITECYIERTGQPEEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRIIRPPRI 265
+ EA YG++D + P I
Sbjct: 181 ATEAQAYGIVDVVAEDPLI 199
>gi|456061682|ref|YP_007475814.1| clp protease proteolytic subunit [Pseudophoenix vinifera]
gi|449326294|gb|AGE92878.1| clp protease proteolytic subunit [Pseudophoenix vinifera]
Length = 204
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQVHGIVDLV 193
>gi|296399222|gb|ADH10397.1| clp protease proteolytic subunit [Selaginella moellendorffii]
Length = 206
Score = 170 bits (431), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 85/201 (42%), Positives = 126/201 (62%), Gaps = 4/201 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R GE +D N LYRER++F+GQN+D+E +NQI+ M+YL+ + S
Sbjct: 1 MPIGVPKVSFRISGEEDMVRIDTHNRLYRERLLFLGQNMDDEIANQIICIMMYLNGENRS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T CVG A + F+L GG R A+P
Sbjct: 61 KDIYLYINSPGGAVLAGISVYDMMQFVVPDVHTICVGLAASMGSFILTGGGITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I +RKTG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEGQAGECLMEAEEILKLRDCITSIYARKTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRII---RPPR 264
++EA YG+ID ++ PPR
Sbjct: 181 AREARVYGIIDLVVMDTSPPR 201
>gi|342316398|ref|YP_004769971.1| clp protease proteolytic subunit (chloroplast) [Wolffia
australiana]
gi|341834263|gb|AEK94532.1| clp protease proteolytic subunit [Wolffia australiana]
Length = 201
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA YGLID +
Sbjct: 180 ATEAQAYGLIDLV 192
>gi|312880128|ref|ZP_07739928.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
gi|310783419|gb|EFQ23817.1| ATP-dependent Clp protease proteolytic subunit ClpP [Aminomonas
paucivorans DSM 12260]
Length = 201
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 85/189 (44%), Positives = 124/189 (65%), Gaps = 2/189 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R++F+G+ I+E +N ++A +L+L+S D K VY
Sbjct: 12 VPYVVEQT-GRGERTY-DIYSRLLKDRIVFLGEEIEEHMANLVVAQLLFLESEDPEKDVY 69
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K PV T C G A +A LLAGG KG R A+P +RI
Sbjct: 70 LYINSPGGVVTAGMAIYDTMQYIKCPVSTICTGQAASMAAVLLAGGAKGKRIALPHARIM 129
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI +A E+LR+R+ + + L TGQP E+I D R + EA+
Sbjct: 130 IHQPLGGAQGQATDIEIQAKEILRLREVLNQILVDHTGQPVERIKADTDRDFFMSAPEAV 189
Query: 252 EYGLIDRII 260
YGL+D++I
Sbjct: 190 AYGLVDKVI 198
>gi|290489478|gb|ADD31123.1| clp protease proteolytic subunit protein [Trochodendron aralioides]
Length = 202
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ++D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQDVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +GL+D +
Sbjct: 181 ATEAQAHGLVDLV 193
>gi|356999212|gb|AET47093.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
muricata]
Length = 203
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA YG++D + P
Sbjct: 181 ATEAQAYGIVDVVAEDP 197
>gi|166235817|gb|ABY85720.1| ATP-dependent protease proteolytic subunit [Silene pseudoatocion]
Length = 196
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERXXXXX 180
Query: 247 SQEALEYGLIDRI 259
A +G++D +
Sbjct: 181 XXXAQAHGIVDLV 193
>gi|157413171|ref|YP_001484037.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9215]
gi|254526501|ref|ZP_05138553.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|157387746|gb|ABV50451.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9215]
gi|221537925|gb|EEE40378.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 195
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 119/178 (66%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A DIR +ADE+L +++ + ELS +TG+ FE I +D R +EA+EYGLID ++
Sbjct: 131 ASDIRIQADEILFLKERLNTELSERTGKDFETIKEDTDRDFYMSPKEAVEYGLIDLVL 188
>gi|442742987|ref|YP_007353939.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Tectona grandis]
gi|438687628|emb|CCP47155.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Tectona grandis]
gi|438688312|emb|CCP47244.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Tectona grandis]
gi|438688436|emb|CCP47333.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Tectona grandis]
Length = 195
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPEVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 180 ATEARAYGIVDLV 192
>gi|544043|sp|P36387.1|CLPP_PINCO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|457148|gb|AAA68094.1| ATP-dependent protease proteolytic subunit (chloroplast) [Pinus
contorta]
Length = 205
Score = 170 bits (430), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 122/199 (61%), Gaps = 1/199 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + +Y MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLYRMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + VR+YI + +TGQP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLVREYITECYIERTGQPEEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRIIRPPRI 265
+ EA YG++D + P I
Sbjct: 181 ATEAQAYGIVDVVAEDPLI 199
>gi|356998847|gb|AET46733.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
patula]
Length = 196
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SR+ + PA + G A D NE+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 SRVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|81176276|ref|YP_398353.1| ATP-dependent Clp protease proteolytic subunit [Lactuca sativa]
gi|452849076|ref|YP_007474754.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum indicum]
gi|122212017|sp|Q332V2.1|CLPP_LACSA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78675194|dbj|BAE47620.1| ATP-dependent clp protease proteolytic subunit [Lactuca sativa]
gi|88657007|gb|ABD47257.1| clp protease proteolytic subunit [Lactuca sativa]
gi|372863231|gb|AEX99303.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum indicum]
Length = 196
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PAG+ A + E ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|139389289|ref|YP_001123055.1| ATP-dependent protease subunit [Aethionema grandiflorum]
gi|139390373|ref|YP_001122971.1| ATP-dependent protease subunit [Aethionema cordifolium]
gi|160380540|sp|A4QJE0.1|CLPP_AETCO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380541|sp|A4QJM4.1|CLPP_AETGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286166|dbj|BAF49795.1| ATP-dependent protease subunit [Aethionema cordifolium]
gi|134286251|dbj|BAF49879.1| ATP-dependent protease subunit [Aethionema grandiflorum]
Length = 196
Score = 170 bits (430), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D + SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTDISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|357001328|gb|AET49180.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
densata]
Length = 196
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI + +TGQP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTGQPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|428697712|ref|YP_007026163.1| clp protease proteolytic subunit (chloroplast) [Pellia
endiviifolia]
gi|408773126|gb|AFU88873.1| clp protease proteolytic subunit (chloroplast) [Pellia
endiviifolia]
Length = 203
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ +D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDES 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K ++TG+P I++D+ R
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
++EA YG++D +
Sbjct: 180 AEEAKVYGIVDLV 192
>gi|149390466|ref|YP_001294295.1| clp protease proteolytic subunit [Illicium oligandrum]
gi|160380554|sp|A6MMW9.1|CLPP_ILLOL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|147917419|gb|ABQ52543.1| clp protease proteolytic subunit [Illicium oligandrum]
Length = 202
Score = 169 bits (429), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEGAVWVDVYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + FLLAGGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + +++TG P + +D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYAQRTGNPLWVVFEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|374411848|gb|AEZ48909.1| clp protease proteolytic subunit [Agapanthus praecox]
Length = 203
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 180 ATEAQAYGIVDLV 192
>gi|306486010|gb|ADM92653.1| clp protease proteolytic subunit protein [Franklinia alatamaha]
Length = 197
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 124/194 (63%), Gaps = 2/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG PKV +R+PGE WVD L N LYRER++F+GQ +D E SNQ++ M+YL DD
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVLINRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDD 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 TKDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFILVGGEITKRLAFP 120
Query: 187 LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 HARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFM 180
Query: 246 GSQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 SATEAQAYGIVDLV 194
>gi|32035048|ref|ZP_00135114.1| COG0740: Protease subunit of ATP-dependent Clp proteases
[Actinobacillus pleuropneumoniae serovar 1 str. 4074]
gi|126208746|ref|YP_001053971.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165976699|ref|YP_001652292.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|307246197|ref|ZP_07528278.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|307255177|ref|ZP_07536995.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|307257345|ref|ZP_07539115.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|307259615|ref|ZP_07541339.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|307261756|ref|ZP_07543422.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
gi|166201796|sp|A3N1T0.1|CLPP_ACTP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706436|sp|B0BQL3.1|CLPP_ACTPJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126097538|gb|ABN74366.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 5b str. L20]
gi|165876800|gb|ABY69848.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 3 str. JL03]
gi|306852806|gb|EFM85030.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 1 str. 4074]
gi|306862050|gb|EFM94026.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 9 str. CVJ13261]
gi|306864195|gb|EFM96108.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 10 str. D13039]
gi|306866260|gb|EFM98124.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 11 str. 56153]
gi|306868574|gb|EFN00385.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 12 str. 1096]
Length = 196
Score = 169 bits (429), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 129/196 (65%), Gaps = 6/196 (3%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + + GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++
Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K +Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A
Sbjct: 55 DPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFA 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R
Sbjct: 115 LPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNF 174
Query: 245 FGSQEALEYGLIDRII 260
+ EA+EYGLID+++
Sbjct: 175 MSAVEAMEYGLIDKVL 190
>gi|435856398|ref|YP_007317273.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Camellia sinensis]
gi|430728297|gb|AGA55621.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Camellia sinensis]
Length = 195
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE W+D+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWIDV-NRLYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 180 ATEAQAYGIVDLV 192
>gi|356998122|gb|AET46018.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
radiata]
Length = 196
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|342316314|ref|YP_004769836.1| clp protease proteolytic subunit (chloroplast) [Wolffiella
lingulata]
gi|341834179|gb|AEK94449.1| clp protease proteolytic subunit [Wolffiella lingulata]
Length = 202
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M G PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MFFGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGLID +
Sbjct: 181 ATEAQAYGLIDLV 193
>gi|317134129|ref|YP_004123449.1| ClpP [Rhizanthella gardneri]
gi|255985060|gb|ACU46607.1| ClpP [Rhizanthella gardneri]
Length = 195
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGLPKVPFRIPGEEDAIWIDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++++IN PGG V P ++IYDTMQ + V T C+G A + +L GGE R A P
Sbjct: 61 RDLHLFINSPGGWVIPGISIYDTMQFVPPTVHTVCIGLAASIGSLILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+E L++R+ I K ++T +P I+KD+ R
Sbjct: 121 ARVMIHQPASSFYESQVGEFILEAEEFLKLRETILKVYVQRTSKPLFVISKDIERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EAL YG++D +
Sbjct: 181 AKEALAYGIVDLV 193
>gi|317046198|ref|YP_004072487.1| ATP-dependent protease [Corynocarpus laevigata]
gi|309252915|gb|ADO60335.1| ATP-dependent protease [Corynocarpus laevigata]
Length = 195
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +RTPG+ W+D++N LYRER++F+GQ +D E SNQ++A M+YL + ++
Sbjct: 1 MPIGVPKVPFRTPGDEDASWIDIYNRLYRERLLFLGQAVDSEISNQLIALMVYLSTESET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG R A+P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVQTVCLGLAASMGSFILVGGAITKRLALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P+ A Q + EA+ELL++R+ + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPSSAFYEAQTGEFILEAEELLKLRETLTMVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|91209012|ref|YP_538874.1| ATP-dependent Clp protease proteolytic subunit [Solanum
bulbocastanum]
gi|108773154|ref|YP_635664.1| ATP-dependent Clp protease proteolytic subunit [Solanum tuberosum]
gi|122196329|sp|Q27S24.1|CLPP_SOLTU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|122201813|sp|Q2MIG3.1|CLPP_SOLBU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|84371919|gb|ABC56237.1| clp protease proteolytic subunit [Solanum bulbocastanum]
gi|88656828|gb|ABD47081.1| clp protease proteolytic subunit [Solanum tuberosum]
gi|329124607|gb|AEB72164.1| clp protease proteolytic subunit (chloroplast) [Solanum tuberosum]
gi|329124694|gb|AEB72250.1| clp protease proteolytic subunit (chloroplast) [Solanum tuberosum]
Length = 198
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKVL+R PG+ WVD++N LYRER++F+GQ I + SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVLFRNPGDPISSWVDVYNRLYRERLLFLGQGISTDLSNQLIGLMMYLSMEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+++N PGG V P +AIYDTMQ ++ + T C+G A + F+LAGG+ R A P
Sbjct: 61 KELYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICIGLAASMGSFILAGGQLTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P A Q + EA EL+++R+ + + + +TG+PF + +D+ R
Sbjct: 121 ARVMIHEPYSAFYMAQVGEFVMEAVELMKLRETLTRVYAERTGKPFWVVHEDMERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDFV 193
>gi|359422286|ref|YP_004935691.1| clpP gene product (chloroplast) [Sesamum indicum]
gi|347448320|gb|AEO92731.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Sesamum indicum]
Length = 196
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ + E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRIPGEEDASWVDVYNRLYRERLLFLGQEVQSEISNQLMGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V + IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVGIYDTMQFVRPDVHTICIGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + +TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKIRETLTRVYVERTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAKAYGIVDLV 193
>gi|166235575|gb|ABY85489.1| ATP-dependent protease proteolytic subunit [Silene samia]
Length = 196
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AI DTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIXDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|114329994|ref|YP_740675.1| clp protease proteolytic subunit [Nandina domestica]
gi|122165937|sp|Q09FT6.1|CLPP_NANDO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114054496|gb|ABI49889.1| clp protease proteolytic subunit [Nandina domestica]
Length = 202
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|342316144|ref|YP_004769653.1| clp protease proteolytic subunit (chloroplast) [Spirodela
polyrhiza]
gi|341834094|gb|AEK94365.1| clp protease proteolytic subunit [Spirodela polyrhiza]
Length = 201
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA YG+ID +
Sbjct: 180 ATEAQAYGIIDLV 192
>gi|69214843|gb|AAZ03804.1| ATP-depedent Clp protease proteolytic subunit [Yucca schidigera]
gi|374411876|gb|AEZ48922.1| clp protease proteolytic subunit, partial [Hesperaloe parviflora]
gi|374411878|gb|AEZ48923.1| clp protease proteolytic subunit, partial [Hosta ventricosa]
Length = 195
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|290489470|gb|ADD31119.1| clp protease proteolytic subunit protein [Oxalis latifolia]
Length = 195
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +RTPG W+D++N LYRERV+F+GQ +D SNQ++A MLYL S ++
Sbjct: 1 MPIGVPKVPFRTPGYRRKSWIDIYNRLYRERVLFLGQGVDSTISNQLIALMLYL-SHENE 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y +IN PGG V P +AIYDTMQ ++ + T C+GFA + FLL GG R A P
Sbjct: 60 KDLYFFINSPGGWVIPGIAIYDTMQFVRPDIQTICMGFAASMGSFLLVGGAITKRLAFPH 119
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA GQ ++ EA+ELL++R+ + + +++TG+P +++D+ R
Sbjct: 120 ARVMIHQPAAIFFGGQVTEVILEAEELLKLREILTRVYAQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|356997395|gb|AET45301.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
virginiana]
gi|357001907|gb|AET49751.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
clausa]
Length = 215
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 122/197 (61%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +R+YI + +TGQP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLLREYITECYIERTGQPEEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA YG++D + P
Sbjct: 181 ATEAQAYGIVDVVAEDP 197
>gi|228016943|gb|ACP51767.1| ATP-dependent Clp protease proteolytic subunit [Pinus banksiana]
Length = 204
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 121/197 (61%), Gaps = 1/197 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINNEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R +P
Sbjct: 61 KEIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRIVLPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +R+YI K +TGQP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTLLREYITKCYIERTGQPEEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRIIRPP 263
+ EA YG++D + P
Sbjct: 181 ATEAQAYGIVDVVAEDP 197
>gi|372290997|ref|YP_005087718.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium raimondii]
gi|318084715|gb|ADV39187.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Gossypium raimondii]
Length = 196
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|452995870|emb|CCQ92258.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 197
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N ++A +L+L + D K +
Sbjct: 3 VPMVIDQTNRGERAY---DIYSRLLKDRIIVLGSEIDDANANLVVAQLLFLAAEDPDKDI 59
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG +T +AIYDTMQ +K PV T C+G A + FLLA GEKG R A+P S +
Sbjct: 60 YLYINSPGGSITAGMAIYDTMQFIKPPVSTICIGIAASMGAFLLAAGEKGKRYALPNSEV 119
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G RGQA+DIR AD +LR R+ I + L+ +TGQP E+I KD R ++EA
Sbjct: 120 MIHQPLGGVRGQAEDIRIHADWILRTREKINQILAERTGQPLERIAKDTDRDFFMSAEEA 179
Query: 251 LEYGLIDRII 260
EYG++D +I
Sbjct: 180 KEYGIVDAVI 189
>gi|441403318|ref|YP_007353791.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum x morifolium]
gi|372863470|gb|AEX99539.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum indicum]
gi|375298861|gb|AFA45300.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Chrysanthemum x morifolium]
Length = 196
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
R+ + PAG+ A + E ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 VRVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|449326729|gb|AGE93308.1| clp protease proteolytic subunit [Chamaedorea seifrizii]
Length = 204
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDAT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQVHGIVDLV 193
>gi|139389975|ref|YP_001123575.1| ATP-dependent protease subunit [Draba nemorosa]
gi|160380553|sp|A4QL44.1|CLPP_DRANE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286777|dbj|BAF50399.1| ATP-dependent protease subunit [Draba nemorosa]
Length = 196
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTICMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+EL+++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELIKIRETITRVYVQRTGKPIWVVSEDMKRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G +D +
Sbjct: 181 ATEAQAHGNVDLV 193
>gi|330850654|ref|YP_004376535.1| clp protease proteolytic subunit [Ptilidium pulcherrimum]
gi|302024783|gb|ADK89629.1| clp protease proteolytic subunit [Ptilidium pulcherrimum]
Length = 212
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/201 (40%), Positives = 128/201 (63%), Gaps = 9/201 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D++N LYRER++F+GQ +D+E +NQ++ M+YL+ D+S
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDES 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP- 186
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 120
Query: 187 -------LSRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKD 238
++R+ + PA + GQA + EA+E+L++RD I K ++TG+P I++D
Sbjct: 121 AFRILLFVNRVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISED 180
Query: 239 LSRIKRFGSQEALEYGLIDRI 259
+ R ++EA YG++D +
Sbjct: 181 MERDVFMSAKEAKVYGIVDLV 201
>gi|295695312|ref|YP_003588550.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295410914|gb|ADG05406.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 196
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 115/178 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID+ +N ++A +L+L + DD K + +YIN PGG +T +AIY
Sbjct: 19 DIYSRLLKDRIIFLGTGIDDIVANLVVAQLLFLAAEDDKKDIRLYINSPGGSITAGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + FLLA G KG R A+P S I + P G RGQA DI+
Sbjct: 79 DTMQYIKPDVSTVCIGMAASMGAFLLAAGTKGKRFALPNSEIMIHQPLGGVRGQAADIKI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 266
AD +LR +D I + LS +TGQP EKI +D R ++EA YGLID +I P +K
Sbjct: 139 HADWILRTKDKINRILSERTGQPLEKIERDTDRDNFMDAEEAKAYGLIDEVISPVDLK 196
>gi|166235663|gb|ABY85573.1| ATP-dependent protease proteolytic subunit [Silene sorensenis]
Length = 196
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPVGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|110227104|ref|YP_665583.1| ATP-dependent Clp protease proteolytic subunit [Populus alba]
gi|134093226|ref|YP_001109527.1| ATP-dependent Clp protease proteolytic subunit [Populus
trichocarpa]
gi|122224626|sp|Q14FD2.1|CLPP_POPAL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380562|sp|A4GYT6.1|CLPP_POPTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|109945542|dbj|BAE97230.1| ATP-dependent Clp protease proteolytic subunit [Populus alba]
gi|133712088|gb|ABO36731.1| ATP-dependent CLP protease proteolytic subunit [Populus
trichocarpa]
Length = 196
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE S W+D++N LYRER++F+GQ+ID E SNQ++ M+YL + +
Sbjct: 1 MPIGVPKVPFRNPGEDSSNWIDVYNRLYRERLLFLGQDIDSEISNQLIGLMVYLSTESEI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P A Q + EA+ELL++R+ + + +++TG+P +++D+ R
Sbjct: 121 ARVMIHQPFAAFYEAQIGEFVLEAEELLKLREILTRVYAQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQVHGIVDLV 193
>gi|334362075|ref|YP_004564128.1| clp protease proteolytic subunit [Nelumbo nucifera]
gi|224474248|gb|ACN49434.1| clp protease proteolytic subunit [Nelumbo nucifera]
gi|383286822|gb|AFH01472.1| clp protease proteolytic subunit (chloroplast) [Nelumbo nucifera]
Length = 202
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVINRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+LAGGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|149390564|ref|YP_001294209.1| clp protease proteolytic subunit [Buxus microphylla]
gi|160380545|sp|A6MM61.1|CLPP_BUXMI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146762309|gb|ABQ45273.1| clp protease proteolytic subunit [Buxus microphylla]
Length = 202
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + + T C+G A + FLL GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDIHTICMGLAASMGSFLLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETVTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AIEAQAHGIVDLV 193
>gi|166235641|gb|ABY85552.1| ATP-dependent protease proteolytic subunit [Silene zawadskii]
Length = 196
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPVGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|290489434|gb|ADD31101.1| clp protease proteolytic subunit protein [Aucuba japonica]
Length = 198
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/195 (42%), Positives = 124/195 (63%), Gaps = 3/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 S--RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+ R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 AQIRVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERDVF 180
Query: 245 FGSQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 MSATEAQAYGIVDLV 195
>gi|374411866|gb|AEZ48918.1| clp protease proteolytic subunit [Dasypogon bromeliifolius]
Length = 203
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/203 (41%), Positives = 128/203 (63%), Gaps = 2/203 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG PF +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPFWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRIIRPPRIKEDM 269
+ EA +G++D + + ED+
Sbjct: 180 ATEAQAHGIVDLVAVENQNTEDL 202
>gi|228017699|gb|ACP52511.1| ATP-dependent Clp protease proteolytic subunit [Pinus pinaster]
Length = 202
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINGEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P +A++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KEIFSFINCPGGSVIPGVALFDMMQAIVPDVNTICMGVAASMGSFILIGGEMHQRLALPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + PA + G A D NE+ + +R+YI + +TGQP E I +DL+R
Sbjct: 121 ARIMIHQPASSYYDGSAADFHNESKHVTLLREYITECYIDRTGQPEEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAKAYGIVDVV 193
>gi|228015924|gb|ACP50764.1| ATP-dependent Clp protease proteolytic subunit [Pinus taeda]
gi|228016306|gb|ACP51140.1| ATP-dependent Clp protease proteolytic subunit [Pinus ponderosa]
gi|228016819|gb|ACP51645.1| ATP-dependent Clp protease proteolytic subunit [Pinus attenuata]
gi|228017185|gb|ACP52005.1| ATP-dependent Clp protease proteolytic subunit [Pinus leiophylla
var. chihuahuana]
gi|356996528|gb|AET44446.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
leiophylla var. chihuahuana]
gi|356996746|gb|AET44661.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
caribaea]
gi|356996963|gb|AET44875.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
arizonica]
gi|356997178|gb|AET45087.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
yecorensis]
gi|356997758|gb|AET45659.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
serotina]
gi|356997831|gb|AET45731.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
sabiniana]
gi|356997976|gb|AET45874.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
rigida]
gi|356998268|gb|AET46162.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pungens]
gi|356998555|gb|AET46445.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
ponderosa var. scopulorum]
gi|356998628|gb|AET46517.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
ponderosa var. benthamiana]
gi|356998920|gb|AET46805.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
palustris]
gi|356998993|gb|AET46877.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
occidentalis]
gi|356999648|gb|AET47523.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
lumholtzii]
gi|356999721|gb|AET47595.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
leiophylla]
gi|356999794|gb|AET47667.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
lawsonii]
gi|356999867|gb|AET47739.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pringlei]
gi|357000159|gb|AET48027.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
jeffreyi]
gi|357000522|gb|AET48385.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
greggii]
gi|357000741|gb|AET48601.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
engelmannii]
gi|357000814|gb|AET48673.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
elliottii]
gi|357000960|gb|AET48817.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
echinata]
gi|357001034|gb|AET48890.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
douglasiana]
gi|357001688|gb|AET49535.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
cubensis]
gi|357001834|gb|AET49679.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
arizonica var. cooperi]
Length = 196
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|183217765|ref|YP_001837385.1| ATP-dependent Clp protease proteolytic subunit [Guizotia
abyssinica]
gi|334701827|ref|YP_004564397.1| clp protease proteolytic subunit (chloroplast) [Ageratina
adenophora]
gi|179366280|gb|ACB86551.1| clp protease proteolytic subunit [Guizotia abyssinica]
gi|334089698|gb|AEG64581.1| clp protease proteolytic subunit (chloroplast) [Ageratina
adenophora]
Length = 196
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 QDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PAG+ A + E ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|124302931|ref|YP_001023726.1| ATP-dependent Clp protease proteolytic subunit [Angiopteris evecta]
gi|160380542|sp|A2T358.1|CLPP_ANGEV RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110628329|gb|ABG79625.1| clp protease proteolytic subunit [Angiopteris evecta]
Length = 197
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N LYRER++F+GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+YIN PGG V P +++YD MQ + V T C+G A + +L GGE R A+P
Sbjct: 60 QDMYLYINSPGGAVLPGISVYDAMQFVVPDVHTICMGLAASMGSSILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K ++TG+P I++D+ R
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
++EA YG++D I
Sbjct: 180 AEEAKAYGIVDLI 192
>gi|374411862|gb|AEZ48916.1| clp protease proteolytic subunit, partial [Chlorophytum
rhizopendulum]
Length = 194
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N LYRER++F+GQ +D E SNQ++ M++L DD+
Sbjct: 1 MPIGVPKVPFRVPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVFLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQLVPPDVHTICMGLAASMGSFILVGGEITKRLALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGTPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|228016444|gb|ACP51276.1| ATP-dependent Clp protease proteolytic subunit [Pinus torreyana
subsp. insularis]
gi|228016508|gb|ACP51339.1| ATP-dependent Clp protease proteolytic subunit [Pinus torreyana
subsp. torreyana]
gi|356999066|gb|AET46949.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pseudostrobus var. apulcensis]
gi|356999429|gb|AET47307.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
montezumae]
gi|357000377|gb|AET48242.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
hartwegii]
gi|357001109|gb|AET48964.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
hartwegii]
gi|357001255|gb|AET49108.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
devoniana]
gi|357001761|gb|AET49607.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
coulteri]
Length = 196
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLIGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|78779134|ref|YP_397246.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9312]
gi|115311341|sp|Q31BD5.1|CLPP1_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|78712633|gb|ABB49810.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
Length = 195
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 120/184 (65%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
A DIR +ADE+L +++ + ELS +TG+ +E I +D R EA+EYGLID ++
Sbjct: 131 ASDIRIQADEILFLKERLNTELSERTGKDYETIKEDTDRDFYMSPSEAVEYGLIDLVLDK 190
Query: 263 PRIK 266
+K
Sbjct: 191 KPVK 194
>gi|356996891|gb|AET44804.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
brutia]
Length = 196
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIGNQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVNTICMGVAASMGSFILIGGEMPKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI + +TGQP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTVLRDYITQCYIERTGQPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|428774108|ref|YP_007165896.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428688387|gb|AFZ48247.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 238
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/185 (44%), Positives = 119/185 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G ID++ ++ ++A +LYL++ D K +Y+YIN PGG V +AIY
Sbjct: 47 DVYSRLLRERIIFLGTAIDDKLADSVVAQLLYLEAEDPKKDIYIYINSPGGSVYSGMAIY 106
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLAGG KG R +P SRI + P G A+GQA DI
Sbjct: 107 DTMQQIEPDVSTICYGIAASMGAFLLAGGAKGKRLGLPNSRIMIHQPLGGAQGQASDIEI 166
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+L ++ + + L+ TGQPFE+I++D R S EA EYG+ID II +
Sbjct: 167 QAKEILYIKQRLNEILTHHTGQPFERISEDTERDFYMSSTEAKEYGIIDDIILRDGVSLP 226
Query: 269 MPRKD 273
+ RKD
Sbjct: 227 LSRKD 231
>gi|374411912|gb|AEZ48940.1| clp protease proteolytic subunit, partial [Sparganium eurycarpum]
Length = 195
Score = 168 bits (426), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|94502515|ref|YP_588142.1| ATP-dependent Clp protease proteolytic subunit [Helianthus annuus]
gi|122179559|sp|Q1KXT4.1|CLPP_HELAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|88656919|gb|ABD47170.1| clp protease proteolytic subunit [Helianthus annuus]
Length = 196
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 QDLYLFINSPGGWVIPGVALYDTMQFVQPDVHTICMGSAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PAG+ A + E ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPVWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|372485817|gb|AEX96545.1| clp protease proteolytic subunit (chloroplast) [Hosta ventricosa]
Length = 211
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 124/200 (62%), Gaps = 8/200 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP- 186
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 187 ------LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDL 239
+ R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+
Sbjct: 121 AYVISNIIRVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDM 180
Query: 240 SRIKRFGSQEALEYGLIDRI 259
R + EA +G++D +
Sbjct: 181 ERDVFMSATEAQAHGIVDLV 200
>gi|255961322|ref|YP_003097504.1| ATP-dependent Clp protease proteolytic subunit [Selaginella
moellendorffii]
gi|254941494|gb|ACT89009.1| ATP-dependent Clp protease proteolytic subunit [Selaginella
moellendorffii]
Length = 206
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/200 (42%), Positives = 125/200 (62%), Gaps = 4/200 (2%)
Query: 69 PIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSK 128
PIG PKV +R GE +D N LYRER++F+GQN+D+E +NQI+ M+YL+ + SK
Sbjct: 2 PIGVPKVSFRISGEEDMVRIDTHNRLYRERLLFLGQNMDDEIANQIICIMMYLNGENRSK 61
Query: 129 RVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLS 188
+Y+YIN PGG V +++YD MQ + V T CVG A + F+L GG R A+P +
Sbjct: 62 DIYLYINSPGGAVLAGISVYDMMQFVVPDVHTICVGLAASMGSFILTGGGITKRIALPHA 121
Query: 189 RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
R+ + PA + GQA + EA+E+L++RD I +RKTG+P +++D+ R +
Sbjct: 122 RVMIHQPASSFYEGQAGECLMEAEEILKLRDCITSIYARKTGKPLWVVSEDMERDVFMSA 181
Query: 248 QEALEYGLIDRII---RPPR 264
+EA YG+ID ++ PPR
Sbjct: 182 REARVYGIIDLVVMDTSPPR 201
>gi|156597979|gb|ABU85256.1| clp protease proteolytic subunit [Cycas micronesica]
Length = 202
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVYNRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P ++IYD MQ + V T C+G A + +L GGE R A+P
Sbjct: 61 KDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I ++TG+P I+ D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRTGKPLWVISGDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|374411854|gb|AEZ48912.1| clp protease proteolytic subunit, partial [Asparagus officinalis]
gi|374411896|gb|AEZ48932.1| clp protease proteolytic subunit, partial [Nolina atopocarpa]
Length = 195
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|392841427|gb|AFM83381.1| clp protease proteolytic subunit (chloroplast) [Corallorhiza
striata var. vreelandii]
Length = 210
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D++N L+RER++F+GQ+++ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPRVPFRSPGEEDAVWIDVYNRLHRERLLFLGQHVNSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + + + T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSTDIHTICIGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPGSYFYESQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|307252913|ref|ZP_07534801.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|306859551|gb|EFM91576.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 190
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/182 (42%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 79 TPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG 138
+ GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++ D K +Y+YIN PG
Sbjct: 6 SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPG 62
Query: 139 GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA 198
G VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+ + P G
Sbjct: 63 GVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGG 122
Query: 199 ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDR 258
ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R + EA+EYGLID+
Sbjct: 123 ARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDK 182
Query: 259 II 260
++
Sbjct: 183 VL 184
>gi|313199614|ref|YP_004021229.1| clp protease proteolytic subunit [Isoetes flaccida]
gi|291575343|gb|ADE18056.1| clp protease proteolytic subunit [Isoetes flaccida]
Length = 205
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV R GE W+D+ N LYRER++F+GQ+ID+E +NQ + ++YL+ D S
Sbjct: 1 MPIGVPKVSLRIFGEEDIVWIDVHNRLYRERLLFLGQHIDDEIANQTICILMYLNGEDQS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T CVG A + F+LAGGE R A+P
Sbjct: 61 KDIYLYINSPGGAVLAGISVYDIMQYIIPNVNTICVGLAASMGSFILAGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P + GQA + EA+E+L++RD + K ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPGSSFYDGQAGECLVEAEEMLKLRDCVTKIYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG+ D I
Sbjct: 181 AEEAKVYGITDPI 193
>gi|290489464|gb|ADD31116.1| clp protease proteolytic subunit protein [Gunnera manicata]
Length = 198
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 125/194 (64%), Gaps = 1/194 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R PGE WVD++N LYR R++F+GQ + E SNQ+++ ++YL +D
Sbjct: 1 MPIGVPRVPHRIPGEEDAYWVDIYNRLYRNRIMFLGQEVSSEISNQLISLLVYLTIEEDR 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K V+++IN PGG V P +A+YDTM+ ++ + T C+G A + FLLAGGE R A P
Sbjct: 61 KDVFLFINSPGGWVVPGVALYDTMRFVQPEIHTICMGMAASMGSFLLAGGEITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + + + E++ELL++R+ I K ++TG+PF I++D+ R
Sbjct: 121 ARVMIHQPASSFYETRTGEFILESEELLKLREIITKVYVQRTGKPFWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRII 260
+ EA YGLID I+
Sbjct: 181 ATEAQAYGLIDIIL 194
>gi|337288342|ref|YP_004627814.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium sp. OPB45]
gi|334902080|gb|AEH22886.1| ATP-dependent Clp protease proteolytic subunit
[Thermodesulfobacterium geofontis OPF15]
Length = 194
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 117/172 (68%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER++FIG IDE +N ++A +LYL++ D K + +YIN PGG VT LAIY
Sbjct: 20 DIYSRLLKERIVFIGTTIDENVANLVIAQLLYLEAEDPDKDIMLYINSPGGLVTAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DT+Q +K V T CVG A +A LLA G KG R A+ SRI L P GA +GQA ++
Sbjct: 80 DTIQYIKPDVCTICVGQAASMAAVLLAAGTKGKRYALRHSRIMLHQPIGAFQGQATEVEI 139
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+LR+R+ I + LS+ TGQP EKI +D R ++EALEYG+ID+I+
Sbjct: 140 QAKEILRLREIITEILSQHTGQPKEKIKQDTERDFYMSAEEALEYGIIDKIL 191
>gi|33861299|ref|NP_892860.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. pastoris str. CCMP1986]
gi|67460516|sp|Q7V1W0.1|CLPP1_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33633876|emb|CAE19201.1| Clp protease subunit [Prochlorococcus marinus subsp. pastoris str.
CCMP1986]
Length = 196
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 119/184 (64%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
A DIR +ADE+L +++ + ELS +TG+ E I D R QEA+EYGLID ++
Sbjct: 131 ASDIRIQADEILYLKERLNTELSERTGKELETIKGDTDRDFYMSPQEAVEYGLIDLVLDK 190
Query: 263 PRIK 266
+K
Sbjct: 191 KPVK 194
>gi|374249975|ref|YP_005089601.1| clpP gene product (chloroplast) [Silene latifolia]
gi|166235729|gb|ABY85636.1| ATP-dependent protease proteolytic subunit [Silene latifolia]
gi|329755546|gb|AEC04109.1| clp protease proteolytic subunit (chloroplast) [Silene latifolia]
Length = 196
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PG+ WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVISGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPVSSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA +G++D +
Sbjct: 181 AEEAQAHGIVDLV 193
>gi|406981698|gb|EKE03119.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 207
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 127/196 (64%), Gaps = 2/196 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ ++ G G + D+++ L RER+IF+G ID++ +N ++A +L+LD+ + K +
Sbjct: 10 VPMVIEQS-GRGERSF-DIFSRLLRERIIFLGTEIDDQVANLMVAQLLFLDAENPEKDIV 67
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG ++ LAIYDTMQ +++ + T C+G A + FLLA G G R ++P SRI
Sbjct: 68 MYINSPGGVISAGLAIYDTMQHVRADIATMCIGEAASMGSFLLAAGTAGKRMSLPHSRIM 127
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P+G ARGQA DI EA E+ R++ + + L++ TGQ F+KI +D R G +EA
Sbjct: 128 IHQPSGGARGQASDIMLEAAEIARIKRQMNELLAKHTGQSFKKIEQDSDRDFYMGPEEAK 187
Query: 252 EYGLIDRIIRPPRIKE 267
EYGLID+II KE
Sbjct: 188 EYGLIDKIITKQEKKE 203
>gi|357419906|ref|YP_004932898.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
gi|355397372|gb|AER66801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermovirga
lienii DSM 17291]
Length = 192
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/188 (46%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R++FIG+ ID+ +N ++A +L+L+S D K VY+
Sbjct: 4 PMVIEQT-GRGERAY-DIYSRLLKDRIVFIGEAIDDHLANLVVAQLLFLESEDPEKDVYV 61
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG +T LAIYDTMQ +K PV T C+G A +A LLAGGE G R A+P +RI L
Sbjct: 62 YINSPGGVITSGLAIYDTMQYIKCPVSTICIGQAASMAAVLLAGGEPGKRIALPSARIML 121
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI A E+LR+++ + L+ T QP EKI D R ++EA E
Sbjct: 122 HQPLGGAQGQAVDIEIHAREILRLKERLNDILTYHTKQPREKIEADTDRDFFMSAEEAKE 181
Query: 253 YGLIDRII 260
YG+ID++I
Sbjct: 182 YGIIDQVI 189
>gi|147677139|ref|YP_001211354.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
gi|259585961|sp|A5D447.1|CLPP_PELTS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146273236|dbj|BAF58985.1| protease subunit of ATP-dependent Clp proteases [Pelotomaculum
thermopropionicum SI]
Length = 194
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/189 (45%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IF+G ID+ +N I+A ML+L++ D K +
Sbjct: 4 VPIVVEQTNRGERAY---DIYSRLLKDRIIFLGGPIDDNTANLIIAQMLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG VT +AIYDTMQ ++SPV T C+G A +A LLA G KG R ++P +RI
Sbjct: 61 QFYINSPGGVVTAGMAIYDTMQYVRSPVATICIGQAASMASLLLAAGAKGKRYSLPYARI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+LR+R ++ + LSR TGQP EKI +D R +QEA
Sbjct: 121 LIHQPLGGVQGQATDIEIHAKEILRMRQFLNEILSRHTGQPIEKIARDTERDYFMSAQEA 180
Query: 251 LEYGLIDRI 259
EYG+ID +
Sbjct: 181 KEYGIIDEV 189
>gi|404474437|ref|YP_006665805.1| clp protease proteolytic subunit (chloroplast) [Elodea canadensis]
gi|374094622|gb|AEY84678.1| clp protease proteolytic subunit (chloroplast) [Elodea canadensis]
Length = 206
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 122/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELLR+R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYETQTGEFILEAEELLRLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 180 AAEAQAYGIVDLV 192
>gi|372000217|gb|AEX65185.1| ATP-dependent Clp protease proteolytic subunit [Mollugo
verticillata]
Length = 195
Score = 167 bits (424), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|290489460|gb|ADD31114.1| clp protease proteolytic subunit protein [Euonymus americanus]
Length = 197
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P++ +R PGE + WVD++N LYRER++F+GQ I+ +NQ++A +LYL D+
Sbjct: 1 MPIGVPRIPFRNPGENASSWVDIYNRLYRERLLFLGQIINTHLANQLIALILYLTMESDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIALYDTMQFVRPDVQTICLGLAASMGSFILVGGKITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P A Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPFSAFFMAQVGEFVLEAEELLKLRETITRVYVQRTGKPLWMVSEDMERDAFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++DR+
Sbjct: 181 ATEAQAHGIVDRV 193
>gi|374411900|gb|AEZ48934.1| clp protease proteolytic subunit, partial [Phormium tenax]
Length = 195
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDNT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|298243590|ref|ZP_06967397.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
gi|297556644|gb|EFH90508.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ktedonobacter
racemifer DSM 44963]
Length = 218
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 122/191 (63%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ TP GE SW DL++ L +ER+IF+G ID++ +N ++A +LYL S D +K +
Sbjct: 27 PAVVESTPRGERSW---DLYSRLLKERIIFVGTPIDDQVANSVVAQLLYLQSEDATKDIQ 83
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG + LAIYDTMQ L+ V T C+G A + +LA G+KG R +P S +
Sbjct: 84 MYINSPGGVIYAGLAIYDTMQWLRPDVSTFCMGMAMSMGAVILAAGQKGKRYTLPNSTVL 143
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A GQA DI A E+LR+R +++ L++ TGQ E+I +D R +Q+A+
Sbjct: 144 IHQPLGGAEGQAADIEITAREILRLRRNLYEILAKHTGQTIERIMQDSDRNYYLSAQQAV 203
Query: 252 EYGLIDRIIRP 262
EYGL+D ++ P
Sbjct: 204 EYGLVDDVLNP 214
>gi|158187126|gb|ABW22759.1| clp protease proteolytic subunit [Phaseolus vulgaris]
Length = 196
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 126/193 (65%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +RTPG+ WVD++N LYRER++F+GQ++D E SNQ+++ M+YL ++
Sbjct: 1 MPIGVPRVPFRTPGDRDASWVDIYNRLYRERLLFLGQDVDSEISNQLISLMIYLSIEKEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ V T C+G A + FLLAGG R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIALYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ I + ++TG+ I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKMRETITRVYVQRTGKSLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|33865835|ref|NP_897394.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8102]
gi|67460510|sp|Q7U6N7.1|CLPP2_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|33633005|emb|CAE07816.1| ATP-dependent Clp protease proteolytic subunit 1 [Synechococcus sp.
WH 8102]
Length = 197
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/186 (44%), Positives = 121/186 (65%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L +++ + +ELS +TGQP ++I +D R EA+EYG
Sbjct: 123 PLGGARGQASDIRIQADEILYLKERLNQELSDRTGQPLDRIQQDTDRDFFMSPGEAVEYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDSVI 188
>gi|334702349|ref|YP_004465212.1| clp protease proteolytic subunit [Jacobaea vulgaris]
gi|308156107|gb|ADO15435.1| clp protease proteolytic subunit [Jacobaea vulgaris]
Length = 196
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDIYNRLYRERLLFLGQEVDSEISNQLIGLMIYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVALYDTMQFVQPDIHTICMGAAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAARGQAD-DIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PAG+ A + E ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPAGSFSEVATGEFILEVGELLKLRETLTRVYVQRTGKPIWVVSEDMERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|406917391|gb|EKD56197.1| ATP-dependent Clp protease proteolytic subunit [uncultured
bacterium]
Length = 195
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 127/190 (66%), Gaps = 5/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P VL +T GE ++ D+++ L +ER++FIG I +E +N ++A +L+LDS +D K +
Sbjct: 10 VPMVLEKTQFGERAY---DIYSRLLKERIVFIGGPISDELANTVIAQLLFLDS-EDKKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +KS V T C+G A + FLL+GG K R A+P ++I
Sbjct: 66 QLYINSPGGSVTAGLAIYDTMQYIKSDVSTICIGIAASMGAFLLSGGAKDKRLALPNAKI 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ G GQA DI+ +A+E++RV++ I K L+++TGQP +K+ KD R S EA
Sbjct: 126 MIHQVMGGFEGQAADIKIQAEEIIRVKNQINKILAKQTGQPLDKVEKDTDRDFYMDSNEA 185
Query: 251 LEYGLIDRII 260
+YG++D+II
Sbjct: 186 KKYGIVDKII 195
>gi|385153457|ref|YP_006073290.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Phalaenopsis equestris]
gi|329668822|gb|AEB96269.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Phalaenopsis equestris]
Length = 203
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 122/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N L+RER++F+GQ +D E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA D EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQARDFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|123968338|ref|YP_001009196.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. AS9601]
gi|123198448|gb|ABM70089.1| Clp protease subunit [Prochlorococcus marinus str. AS9601]
Length = 195
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 83/184 (45%), Positives = 120/184 (65%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPDKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
A DIR +ADE+L +++ + ELS +TG+ ++ I +D R EA+EYGLID ++
Sbjct: 131 ASDIRIQADEILFLKERLNTELSERTGKDYDTIKEDTDRDFYMSPNEAVEYGLIDLVLDK 190
Query: 263 PRIK 266
IK
Sbjct: 191 KPIK 194
>gi|7524625|ref|NP_042379.1| ATP-dependent Clp protease proteolytic subunit [Pinus thunbergii]
gi|1168979|sp|P41609.1|CLPP_PINTH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|1262619|dbj|BAA04336.1| ATP-dependent protease subunit [Pinus thunbergii]
gi|356997613|gb|AET45516.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
sylvestris]
gi|356999139|gb|AET47021.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
nigra]
gi|357001401|gb|AET49252.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
densiflora]
Length = 196
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + PA + G A D NE+ + +RDYI + +T QP E I +DL+R
Sbjct: 121 ARIMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTDQPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|114329772|ref|YP_740590.1| clp protease proteolytic subunit [Platanus occidentalis]
gi|122166011|sp|Q09G21.1|CLPP_PLAOC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114054410|gb|ABI49804.1| clp protease proteolytic subunit [Platanus occidentalis]
Length = 202
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVYNRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|356998701|gb|AET46589.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pinea]
Length = 196
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +R+YI + +TGQP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLREYITECYIERTGQPEEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|122202884|sp|Q2QD64.1|CLPP_CUCSA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74027125|gb|AAZ94675.1| ATP-dependent protease [Cucumis sativus]
gi|115432828|gb|ABI97441.1| clp protease proteolytic subunit [Cucumis sativus]
gi|115498328|gb|ABI98770.1| clp protease proteolytic subunit [Cucumis sativus]
Length = 195
Score = 167 bits (424), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PGE WVDL+N LYR+R++F+GQ+++ E SNQI+ M+YL D +
Sbjct: 1 MPVGVPKVPFRLPGEEDASWVDLYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K Y++IN PGG V P + ++DTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICIGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + ++G+ + E+ ELL +R+ I K ++TG+P I++DL R
Sbjct: 121 ARVMIHQPASSFSKGKTGEFVLESTELLNLRETITKVYVQRTGKPLWVISEDLERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 APEAQAHGIVDLV 193
>gi|322515314|ref|ZP_08068311.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
gi|322118690|gb|EFX90902.1| ATP-dependent Clp protease, protease subunit [Actinobacillus ureae
ATCC 25976]
Length = 217
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/217 (40%), Positives = 135/217 (62%), Gaps = 11/217 (5%)
Query: 44 YGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIG 103
+ R+ L IRN K +A++P+ + + GE S+ D+++ L +ER+IF+
Sbjct: 6 FDRIAVFLRFRIRNPK-----MAVIPMVVEQT---SKGERSY---DIYSRLLKERIIFLN 54
Query: 104 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCV 163
+++ +N I+A +L+L+S D K +Y+YIN PGG VT LAIYDTM +K V T C
Sbjct: 55 GEVEDHMANLIVAQLLFLESEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIKPDVATLCT 114
Query: 164 GFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKE 223
G A + FLL+GG KG R A+P +R+ + P G ARGQA DI+ +A E+L++++ + K
Sbjct: 115 GQACSMGAFLLSGGAKGKRFALPHARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTKR 174
Query: 224 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
++ +GQPFEK+ D R + EA EYGLID+++
Sbjct: 175 MAGHSGQPFEKVAADTERDNFMSAFEAAEYGLIDKVL 211
>gi|166201959|gb|ABY84433.1| ATP-dependent protease proteolytic subunit [Silene flos-jovis]
Length = 196
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PG+ WVD++N LYRER++F+GQ ++ E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDVYNRLYRERLLFLGQEVESEISNQIIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V + IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGSVISGVGIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|356999284|gb|AET47164.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
mugo]
Length = 196
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + PA + G A D NE+ + +RDYI + +T QP E I +DL+R
Sbjct: 121 ARIMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTEQPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|356998410|gb|AET46302.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pseudostrobus]
Length = 196
Score = 167 bits (423), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ+ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLXGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITKCYIERTGHPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|428216584|ref|YP_007101049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
gi|427988366|gb|AFY68621.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
sp. PCC 7367]
Length = 197
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/197 (42%), Positives = 127/197 (64%), Gaps = 3/197 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D+ SN I+A ML+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIFSRLLRERIVFLGQQVDDTVSNLIVAQMLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
Y+N PGG VT +AIYDTMQ ++ V T CVG A + FLLAGG G R ++P +RI +
Sbjct: 61 YVNSPGGSVTAGMAIYDTMQHIQPDVSTICVGLAASMGAFLLAGGAAGKRLSLPHTRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L + + + L+ TGQPF++I +D R +QEA +
Sbjct: 121 HQPLGGAQGQAADIEIQAKEILYHKQRLNELLASHTGQPFDRIAEDTERDFFMSAQEAKD 180
Query: 253 YGLIDR-IIRPPRIKED 268
YGL+D +++ PR D
Sbjct: 181 YGLLDEVVVKRPRADAD 197
>gi|166235773|gb|ABY85678.1| ATP-dependent protease proteolytic subunit [Silene sordida]
Length = 196
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P ++
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPIWVVSXXXXXXXXMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|383931214|ref|YP_006073129.1| clp protease proteolytic subunit (chloroplast) [Elaeis guineensis]
gi|325305732|gb|ADZ10893.1| clp protease proteolytic subunit (chloroplast) [Elaeis guineensis]
Length = 204
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RE ++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGIPKVPFRSPGEEDAIWVDVYNRLHREGLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQVHGIVDLV 193
>gi|372000219|gb|AEX65186.1| ATP-dependent Clp protease proteolytic subunit [Portulacaria afra]
Length = 195
Score = 167 bits (422), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E +NQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEIANQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|69214841|gb|AAZ03803.1| ATP-depedent Clp protease proteolytic subunit [Typha latifolia]
gi|374411858|gb|AEZ48914.1| clp protease proteolytic subunit, partial [Brocchinia micrantha]
gi|374411873|gb|AEZ48921.1| clp protease proteolytic subunit, partial [Fosterella caulescens]
gi|374411884|gb|AEZ48926.1| clp protease proteolytic subunit, partial [Kingia australis]
gi|374411890|gb|AEZ48929.1| clp protease proteolytic subunit, partial [Navia saxicola]
gi|374411894|gb|AEZ48931.1| clp protease proteolytic subunit, partial [Neoregelia carolinae]
gi|374411902|gb|AEZ48935.1| clp protease proteolytic subunit, partial [Pitcairnia feliciana]
gi|374411906|gb|AEZ48937.1| clp protease proteolytic subunit, partial [Puya laxa]
Length = 195
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|225850859|ref|YP_002731093.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
gi|225644930|gb|ACO03116.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Persephonella
marina EX-H1]
Length = 202
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L+S D K +
Sbjct: 13 VPIVIEQTPRGERAY---DIYSRLLKDRIIMLGFPIDDHIANLIIAQLLFLESEDPEKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT LAIYDTM+ +K V T C+G A + FLL+ G KG R A+P SRI
Sbjct: 70 YMYINSPGGVVTSGLAIYDTMRYIKPDVVTICMGQAASMGAFLLSAGAKGKRYALPSSRI 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+LR++ Y+ + L+ TGQP EKI +D R + +A
Sbjct: 130 MIHQPLGGFQGQATDIEIHAKEILRLKKYLNERLAEHTGQPLEKIERDTERDFFMSAHDA 189
Query: 251 LEYGLIDRII 260
+EYGLID++I
Sbjct: 190 VEYGLIDKVI 199
>gi|290489462|gb|ADD31115.1| clp protease proteolytic subunit protein [Ficus sp. Moore 315]
Length = 208
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 126/200 (63%), Gaps = 1/200 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PG+ W+D++N LYRER++F+GQ I E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGDEDALWIDIYNRLYRERLLFLGQPITSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+++N PGG V P L IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFLNSPGGWVIPGLGIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + +++TG+ I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYAQRTGKSLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRIIRPPRIK 266
+ EA +GL+D + +IK
Sbjct: 181 ATEAQAHGLVDLVAVQEKIK 200
>gi|139389667|ref|YP_001123224.1| ATP-dependent protease subunit [Arabis hirsuta]
gi|160380543|sp|A4QK43.1|CLPP_ARAHI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134286422|dbj|BAF50048.1| ATP-dependent protease subunit [Arabis hirsuta]
Length = 196
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD++N LYRER+ F+GQ +D E SNQ+++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEGDTSWVDIYNRLYRERLFFLGQEVDTEISNQLISLMIYLSIEKDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V +AIYDTMQ ++ V T +G A +A F+L GG R A P
Sbjct: 61 KDLYLFINSPGGWVISGMAIYDTMQFVRPDVQTIGMGLAASIASFILVGGAITKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKIRETITRVYVQRTGKPIWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|289065114|ref|YP_003434000.1| clp protease proteolytic subunit [Typha latifolia]
gi|281371797|gb|ADA63724.1| clp protease proteolytic subunit [Typha latifolia]
Length = 203
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|228016377|gb|ACP51210.1| ATP-dependent Clp protease proteolytic subunit [Pinus thunbergii]
gi|356997108|gb|AET45018.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
yunnanensis]
gi|356997540|gb|AET45444.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
taiwanensis]
gi|356999575|gb|AET47451.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
massoniana]
gi|357000013|gb|AET47883.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
kesiya]
gi|357000232|gb|AET48099.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
hwangshanensis]
gi|357000668|gb|AET48529.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
fragilissima]
Length = 196
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI + +T QP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTDQPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|114804289|ref|YP_762286.1| clp protease proteolytic subunit [Morus indica]
gi|122166780|sp|Q09WZ2.1|CLPP_MORIN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78100341|gb|ABB20982.1| clp protease proteolytic subunit [Morus indica]
Length = 196
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PG+ WVD+ N LYRER++F+GQ +D E SNQ++ M++L DD+
Sbjct: 1 MPIGVPKVPFRSPGDEDASWVDVINRLYRERLLFLGQEVDSEISNQLIGLMVFLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P L IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGLGIYDTMQFVQPDVQTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+ I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKSLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +GL+D +
Sbjct: 181 ATEAQAHGLVDLV 193
>gi|407691666|ref|YP_006816455.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
gi|407387723|gb|AFU18216.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus suis
H91-0380]
Length = 196
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 124/189 (65%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L+S D K +Y
Sbjct: 5 PMVVEQTSKGERSY---DIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLESEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 62 LYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPHARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G ARGQA DI+ +A E+L++++ + + ++ +GQPFEK+ D R + EA
Sbjct: 122 IHQPLGGARGQATDIQIQAQEILKLKEMLTRRMAEHSGQPFEKVAADTERDNFMSAFEAA 181
Query: 252 EYGLIDRII 260
EYGLID+++
Sbjct: 182 EYGLIDKVL 190
>gi|359299708|ref|ZP_09185547.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
[parainfluenzae] CCUG 13788]
gi|402306845|ref|ZP_10825880.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
gi|400373868|gb|EJP26793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Haemophilus sputorum HK 2154]
Length = 197
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ ++++ +N I+A +L+L++ D K +Y
Sbjct: 5 PMVVEQTSKGERSY---DIYSRLLKERIIFLNGQVEDQMANLIVAQLLFLEAEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 62 LYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G ARGQA DI A E+L++++ + ++++ +GQPFEK+ D R + EA+
Sbjct: 122 IHQPLGGARGQATDIEIHAREILKLKEMLTRKMAEHSGQPFEKLAADTERDNFMSATEAM 181
Query: 252 EYGLIDRII 260
EYGLID+++
Sbjct: 182 EYGLIDKVL 190
>gi|308742621|gb|ADO33472.1| clp protease proteolytic subunit [Smilax china]
Length = 204
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDFFLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ I K ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETITKVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQSHGIVDLV 193
>gi|372000215|gb|AEX65184.1| ATP-dependent Clp protease proteolytic subunit [Didierea
madagascariensis]
Length = 195
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E +NQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDATWVDV-NRLYRERLLFLGQEVDSEIANQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|372485872|gb|AEX96572.1| clp protease proteolytic subunit (chloroplast) [Calibanus hookerii]
Length = 210
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 124/199 (62%), Gaps = 7/199 (3%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 S------RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLS 240
+ R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+
Sbjct: 121 AMLYQYIRVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDME 180
Query: 241 RIKRFGSQEALEYGLIDRI 259
R + EA +G++D +
Sbjct: 181 RDVFMSATEAQAHGIVDLV 199
>gi|328950943|ref|YP_004368278.1| ATP-dependent Clp protease proteolytic subunit [Marinithermus
hydrothermalis DSM 14884]
gi|328451267|gb|AEB12168.1| ATP-dependent Clp protease proteolytic subunit [Marinithermus
hydrothermalis DSM 14884]
Length = 194
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 121/172 (70%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N ++A +L+L++ + ++ + +YIN PGG+V LAIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDTQVANTVVAQILFLEAQNPNQEIKLYINSPGGEVDAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +++PV T CVG A +A +LA GE G R A+P SR+ + P G ARGQA DI
Sbjct: 78 DTMQYVRAPVSTICVGLAASMAAVILAAGEPGRRYALPHSRVMIHQPWGGARGQAADIAI 137
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
EA+++L++R+ + K LS+ TGQP EK+T+D R +Q A EYG++D+++
Sbjct: 138 EAEQILKMRENLNKILSQHTGQPLEKVTRDTDRNFWMDAQMAKEYGIVDQVV 189
>gi|228015993|gb|ACP50832.1| ATP-dependent Clp protease proteolytic subunit [Pinus resinosa]
Length = 196
Score = 167 bits (422), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQAIVPDVHTICMGVAASMGSFILIGGEMPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI + +T QP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTMLRDYITRCYIERTEQPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|50346808|ref|YP_053179.1| ATP-dependent Clp protease proteolytic subunit [Nymphaea alba]
gi|121720638|ref|YP_001001559.1| clp protease proteolytic subunit [Nuphar advena]
gi|68052136|sp|Q6EW27.1|CLPP_NYMAL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|160380559|sp|A1XFY0.1|CLPP_NUPAD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|50250353|emb|CAF28619.1| ATP-dependent protease proteolytic subunit [Nymphaea alba]
gi|84682229|gb|ABC60483.1| clp protease proteolytic subunit [Nuphar advena]
Length = 202
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDIYNRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYD MQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|303250639|ref|ZP_07336836.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
gi|302650627|gb|EFL80786.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 6 str. Femo]
Length = 196
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 80/196 (40%), Positives = 128/196 (65%), Gaps = 6/196 (3%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + + GE S+ D+++ L +ER+IF+ +++ +N I+A ML+L++
Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLTGQVEDHMANLIVAQMLFLEAE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K +Y+YIN PGG VT LAIY TM +K V T C G A + FLL+GG KG R A
Sbjct: 55 DPEKDIYLYINSPGGVVTAGLAIYATMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFA 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P +R+ + P G ARGQA DI+ +A E+L++++ + ++++ +GQPFEK+ D R
Sbjct: 115 LPNARVMIHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQPFEKVAADTERDNF 174
Query: 245 FGSQEALEYGLIDRII 260
+ EA+EYGLID+++
Sbjct: 175 MSAVEAMEYGLIDKVL 190
>gi|356997467|gb|AET45372.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
tropicalis]
Length = 196
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDSN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ++ V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDIMQAIVPDVHTICMGVAASMGSFILIGGEIPKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI + +T QP E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGSAADFHNESKHVTVLRDYITRCYMERTDQPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDVV 193
>gi|309322471|ref|YP_003933985.1| clp protease proteolytic subunit [Eucalyptus grandis]
gi|308223305|gb|ADO23613.1| clp protease proteolytic subunit [Eucalyptus grandis]
Length = 195
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDN 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFVLVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ I + ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETITRVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|318041532|ref|ZP_07973488.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0101]
Length = 196
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/192 (44%), Positives = 122/192 (63%), Gaps = 3/192 (1%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTSESANRIVAQLLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLTHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L ++ + +EL+ +TGQP +I +D R EA EYG
Sbjct: 123 PLGGARGQASDIRIQADEILYLKKKLNQELADRTGQPLSRIEEDTDRDFFMSPAEAAEYG 182
Query: 255 LIDRII--RPPR 264
LID++I RP R
Sbjct: 183 LIDKVIDKRPVR 194
>gi|126696140|ref|YP_001091026.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9301]
gi|126543183|gb|ABO17425.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9301]
Length = 195
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 82/184 (44%), Positives = 120/184 (65%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSETANRIVAQLLFLEAEDPEKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G +G RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTQGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
A DIR +ADE+L +++ + ELS +TG+ ++ I +D R EA+EYGLID ++
Sbjct: 131 ASDIRIQADEILFLKERLNTELSERTGKDYDTIKEDTDRDFYMSPNEAVEYGLIDLVLDK 190
Query: 263 PRIK 266
IK
Sbjct: 191 KPIK 194
>gi|78188367|ref|YP_378705.1| peptidase S14, ClpP [Chlorobium chlorochromatii CaD3]
gi|90101406|sp|Q3ATL3.1|CLPP_CHLCH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78170566|gb|ABB27662.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
chlorochromatii CaD3]
Length = 225
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 125/196 (63%), Gaps = 3/196 (1%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+YI
Sbjct: 31 MVIETSGRGERAF-DIFSRLLRERIIFLGTGIDEHVAGLIMAQLIFLESEDPERDIYIYI 89
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ L IYDTMQ ++ + T CVG A + FLLA G KG R+++P SRI +
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPEISTVCVGMAASMGAFLLASGNKGKRASLPHSRIMIHQ 149
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P+G A+GQ DI +A E+ ++R + + L++ TGQP EK+ +D R + QEALEYG
Sbjct: 150 PSGGAQGQETDIVIQAREIEKIRRLLEELLAKHTGQPVEKVREDSERDRWMNPQEALEYG 209
Query: 255 LIDRII--RPPRIKED 268
LID I RP K+D
Sbjct: 210 LIDAIFEKRPTPEKKD 225
>gi|350529149|dbj|BAL03693.1| ATP-dependent Clp protease proteolytic subunit [Bowenia serrulata]
Length = 202
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER++F GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVYNRLYRERLLFPGQQVDDEIANQLIGIMMYLNGEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P ++IYD MQ + V T C+G A + +L GGE R A+P
Sbjct: 61 KDIYPYINSPGGAVIPGISIYDAMQFVVPDVHTICMGLAASMGSSVLTGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R + PA + GQA + EA+E+L++RD I ++TG+P I+ D+ R
Sbjct: 121 ARAMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRTGKPLWVISGDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDLV 193
>gi|374411864|gb|AEZ48917.1| clp protease proteolytic subunit [Molineria capitulata]
Length = 203
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQAVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVLPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|239618479|ref|YP_002941801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
gi|239507310|gb|ACR80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kosmotoga
olearia TBF 19.5.1]
Length = 206
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 90/201 (44%), Positives = 123/201 (61%), Gaps = 5/201 (2%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
MMP+ V Y +G + + D++ L ER+IF+G +D+E SN ++A +L+L+S D
Sbjct: 5 MMPV----VPYVVENKGRGERIYDIFTKLLSERIIFLGWPLDDEISNIVVAQLLFLESQD 60
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K + +YIN PGG VT LAIYDTMQ +K V T C+G A +A +LAGG KG R A+
Sbjct: 61 PDKDISIYINSPGGSVTSGLAIYDTMQYIKPDVSTICIGMAASMAAVILAGGSKGKRFAL 120
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
P SRI + P G A G A DI ELL +RD I + LS T QP EKI +D R
Sbjct: 121 PHSRIMIHQPWGGAEGTAKDIEIRTRELLFIRDQINEILSHHTNQPKEKIEEDTDRDFYM 180
Query: 246 GSQEALEYGLIDRIIRPPRIK 266
EA++YGL+D++I P ++K
Sbjct: 181 SPAEAVKYGLVDKVIEPRKLK 201
>gi|32480867|ref|NP_862778.1| ATP-dependent Clp protease proteolytic subunit [Calycanthus
floridus var. glaucus]
gi|68052187|sp|Q7YJV2.1|CLPP_CALFG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|32399403|emb|CAD28745.1| ATP-dependent protease proteolytic subunit [Calycanthus floridus
var. glaucus]
Length = 202
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLTIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|374411850|gb|AEZ48910.1| clp protease proteolytic subunit [Albuca kirkii]
Length = 203
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPVGVPKVPFRSPGEEDAIWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +A+YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINTPGGWVIPGIAVYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++DL R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDLERDIFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|374411892|gb|AEZ48930.1| clp protease proteolytic subunit, partial [Neoastelia spectabilis]
Length = 201
Score = 166 bits (420), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|89280660|ref|YP_514877.1| ATP-dependent Clp protease proteolytic subunit [Solanum
lycopersicum]
gi|122201771|sp|Q2MI76.1|CLPP_SOLLC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|84372007|gb|ABC56324.1| clp protease proteolytic subunit [Solanum lycopersicum]
gi|89241696|emb|CAJ32419.1| ATP-dependent Clp protease proteolytic subunit [Solanum
lycopersicum]
Length = 206
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V++R PG+ WVD++N LYRER++F+GQ I E SNQ++ MLYL D++
Sbjct: 1 MPIGVPRVVFRNPGDPISSWVDIYNRLYRERLLFLGQGIGTELSNQLIGLMLYLSMEDEN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+++N PGG V P +AIYDTMQ ++ + T C+G A + F+LAGG+ R A P
Sbjct: 61 KDLYLFVNSPGGWVIPGIAIYDTMQFVRPDIHTICLGLAASMGSFILAGGQLTKRIAFPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P +G Q + EA E+ ++R+ + + + KTGQP I +D+ R
Sbjct: 121 ARVMIHEPYSGFYMAQVGEFVLEAIEMAKLRETLTRVYAEKTGQPVWVIHEDMERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDFV 193
>gi|372000221|gb|AEX65187.1| ATP-dependent Clp protease proteolytic subunit [Portulaca oleracea]
Length = 195
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E NQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEIGNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDVV 192
>gi|399050633|ref|ZP_10740728.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|398051596|gb|EJL43914.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
Length = 200
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G I++ +N ++A +L+L + D K ++
Sbjct: 7 PTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIH 63
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTM +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 64 LYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVM 123
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A +L++RD++ L+ +TGQP E+I KD R +QEA+
Sbjct: 124 IHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAV 183
Query: 252 EYGLIDRII 260
EYGLID++I
Sbjct: 184 EYGLIDKVI 192
>gi|310641963|ref|YP_003946721.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|386040947|ref|YP_005959901.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
gi|309246913|gb|ADO56480.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa SC2]
gi|343096985|emb|CCC85194.1| ATP-dependent Clp protease proteolytic subunit [Paenibacillus
polymyxa M1]
Length = 194
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 120/194 (61%), Gaps = 4/194 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M + P V+ +T GE S+ D+++ L ++R++F+G ID++ +N I+A +L+L + D
Sbjct: 1 MSVYVPYVVEQTAQGERSY---DIYSRLLKDRIVFVGATIDDQLANSIIAQLLFLAAEDP 57
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +YMYIN PGG + AIYDTMQ +K V T C GFA LL G KG RSA+P
Sbjct: 58 EKDIYMYINSPGGSTSAGFAIYDTMQYIKPEVHTICTGFAASFGAILLLAGAKGKRSALP 117
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
S I + P G A+GQA DI A +L R+ + + +TGQ FEK+ KD+ R
Sbjct: 118 NSEIMIHQPHGGAQGQASDIAISAKRILWTREKATRITAERTGQSFEKVEKDMDRDFYMS 177
Query: 247 SQEALEYGLIDRII 260
+QEALEYG+ID++I
Sbjct: 178 AQEALEYGVIDQVI 191
>gi|433542295|ref|ZP_20498724.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|432186391|gb|ELK43863.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 198
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G I++ +N ++A +L+L + D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTM +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGTKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A +L++RD++ L+ +TGQP E+I KD R +QEA+
Sbjct: 122 IHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAQEAV 181
Query: 252 EYGLIDRII 260
EYGLID++I
Sbjct: 182 EYGLIDKVI 190
>gi|352093978|ref|ZP_08955149.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351680318|gb|EHA63450.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 209
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +++Y+
Sbjct: 17 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTSDSANRIVAQLLFLEAEDPEKEIFLYV 75
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 76 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQ 135
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A GQA DIR +ADE+L ++D + ELS +TGQP +KI D R Q+A+EYG
Sbjct: 136 PLGGASGQASDIRIQADEILFLKDRLNHELSDRTGQPLDKIQADTDRDFFMSPQQAMEYG 195
Query: 255 LIDRII 260
LID +I
Sbjct: 196 LIDNVI 201
>gi|290489444|gb|ADD31106.1| clp protease proteolytic subunit protein [Meliosma aff. cuneifolia
Moore 333]
Length = 202
Score = 166 bits (420), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ ++ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVYNRLHRERLLFLGQGVESEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|169142814|ref|YP_001687238.1| ATP-dependent Clp protease proteolytic subunit [Aneura mirabilis]
gi|153973840|gb|ABS54500.1| clp protease proteolytic subunit [Aneura mirabilis]
Length = 203
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWIDV-NRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG V +++YD MQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 KDMYLYINSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSFILTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I K ++TG+P I++D+ R
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDCITKVYVQRTGKPLWIISEDMERDVFSS 179
Query: 247 SQEALEYGLIDRI 259
++EA +G++D +
Sbjct: 180 AEEAKIHGIVDSV 192
>gi|148239550|ref|YP_001224937.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7803]
gi|147848089|emb|CAK23640.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 196
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 120/186 (64%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLRHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L +++ + +ELS +T QP EKI +D R EA++YG
Sbjct: 123 PLGGARGQASDIRIQADEILFLKNRLNQELSERTSQPLEKIQEDTDRDFFMSPNEAVDYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDSVI 188
>gi|166235685|gb|ABY85594.1| ATP-dependent protease proteolytic subunit [Silene integripetala]
Length = 196
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AI DTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIXDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+ +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKSTWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|228017379|gb|ACP52196.1| ATP-dependent Clp protease proteolytic subunit [Larix occidentalis]
Length = 196
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + I+D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGIFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA G A D NE+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 ARVMIHQPASTYYDGPAADFHNESKHVTMLRDYITKCYIERTGTPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDAV 193
>gi|337286231|ref|YP_004625704.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
gi|335359059|gb|AEH44740.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfatator indicus DSM 15286]
Length = 202
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 88/199 (44%), Positives = 131/199 (65%), Gaps = 5/199 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L RER++FIG ID+ +N ++A +L+L++ D + +
Sbjct: 3 VPIVIEQTARGERAY---DIYSRLLRERIVFIGAPIDDHLANLVIAQLLFLEAEDPDRDI 59
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +K + T C+G A +A LLAGG KG R A+P SRI
Sbjct: 60 TLYINSPGGIVTSGLAIYDTMQYIKPDICTLCLGQAASMAAVLLAGGTKGKRYALPHSRI 119
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
L P G+ +GQA D+ +A E+LR+R + + L+ TGQP E+I KD R S+EA
Sbjct: 120 MLHQPIGSFQGQATDVDIQAREILRLRAMLNEILANHTGQPIEQIQKDTERDFYMSSEEA 179
Query: 251 LEYGLIDRII-RPPRIKED 268
+YG+ID+I+ + P +KE+
Sbjct: 180 QKYGVIDKILTKRPSMKEE 198
>gi|157325555|ref|YP_001468333.1| ATP-dependent Clp protease proteolytic subunit [Ipomoea purpurea]
gi|157056783|gb|ABV02373.1| clp protease proteolytic subunit [Ipomoea purpurea]
Length = 204
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ W+D++N LYRER +F+ Q ID E +NQI+ ++YL+ DD+
Sbjct: 1 MPIGVPKVPFRNPGDEDASWIDIYNRLYRERFLFLVQEIDSEIANQIVGLLVYLNIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +++YIN PGGDV +AIYD MQ+++ V T C+G A + F+LAGG R+A P
Sbjct: 61 KDIFLYINSPGGDVISGVAIYDMMQTVRPGVSTICIGLAASMGSFILAGGAITRRAAFPH 120
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P A ++ E E L++R+ I + +++TG P I++D+ R F
Sbjct: 121 ARVMIHQPRTSFFESHAGELLLEMKEALKLRERIAEIYAQRTGNPTSIISRDMDRDVFFS 180
Query: 247 SQEALEYGLIDRI 259
+++A YG+ID I
Sbjct: 181 ARQARIYGIIDDI 193
>gi|87124411|ref|ZP_01080260.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9917]
gi|86167983|gb|EAQ69241.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9917]
Length = 196
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 120/186 (64%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+G+ + + +N+I+A +L+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEAEDPDKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L ++D + +EL+ ++GQP EKI D R Q+A+ YG
Sbjct: 123 PLGGARGQASDIRIQADEILFLKDKLNRELAERSGQPLEKIQVDTDRDFFMSPQDAVSYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDSVI 188
>gi|87302740|ref|ZP_01085551.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
gi|87282623|gb|EAQ74581.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 5701]
Length = 196
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 84/192 (43%), Positives = 123/192 (64%), Gaps = 3/192 (1%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + E +N+++A +L+L++ D K +++YI
Sbjct: 4 IVIEDSGRGERAF-DIYSRLLRERIIFLGEPVTAESANRVVAQLLFLEAEDPEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLTAGAKGKRSSLHHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L ++D + +ELS +TGQP ++I D R EA+ YG
Sbjct: 123 PLGGARGQASDIRIQADEILYLKDKLNRELSDRTGQPLDRIQIDTDRDFFMSPAEAVSYG 182
Query: 255 LIDRII--RPPR 264
LID++I RP R
Sbjct: 183 LIDKVIEKRPVR 194
>gi|364284009|ref|YP_004940534.1| clpP gene product (chloroplast) [Boea hygrometrica]
gi|340549432|gb|AEK53254.1| clp protease proteolytic subunit (chloroplast) [Boea hygrometrica]
Length = 196
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 85/194 (43%), Positives = 123/194 (63%), Gaps = 3/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N LYRER++F+GQ+++ E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRIPGEEDASWVDV-NRLYRERLLFLGQDVNSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y +IN PGG V LAIYDTMQ ++ V T C+G A + FLLA GE R A P
Sbjct: 60 KDLYFFINSPGGWVIAGLAIYDTMQFVRPEVHTVCMGLAASMGSFLLAAGELTKRLAFPH 119
Query: 188 S-RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+ R+ + PA + Q + EA+ELL++R+ I + +++TG+P +++DL R
Sbjct: 120 AWRVMIHQPAASFYEAQTGEFILEAEELLKIRETITRVYAQRTGKPLWVVSEDLERDVFM 179
Query: 246 GSQEALEYGLIDRI 259
+ EA YG+ID +
Sbjct: 180 SATEAQAYGIIDLV 193
>gi|260435297|ref|ZP_05789267.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|260413171|gb|EEX06467.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 205
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 120/186 (64%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 12 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYI 70
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 71 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQ 130
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DIR +ADE+L +++ + KELS +TGQP ++I +D R EA+ YG
Sbjct: 131 PLGGAQGQASDIRIQADEILFLKERLNKELSDRTGQPLDRIQQDTDRDFFMSPTEAVNYG 190
Query: 255 LIDRII 260
LID +I
Sbjct: 191 LIDSVI 196
>gi|284929120|ref|YP_003421642.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284809579|gb|ADB95284.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 214
Score = 166 bits (419), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 113/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G +D++ +N I+A +LYLDS D K + +YIN PGG V LAIY
Sbjct: 42 DIYSRLLRERIIFLGTPVDDQMANSIVAQLLYLDSEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTM+ ++ + T C G A + FLL+GG KG R A+P SRI + P G A+GQA DI
Sbjct: 102 DTMKQIRPDIVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIAI 161
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L ++ + LS TG+PF+ I D R S+EA+EYGLID++I
Sbjct: 162 QAQEILYIKKRLNNMLSEHTGKPFDTIAADTERDFFMSSKEAVEYGLIDKVI 213
>gi|428771131|ref|YP_007162921.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685410|gb|AFZ54877.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 239
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 113/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G ID++ ++ I+A +LYL++ D K +Y+YIN PGG V +AIY
Sbjct: 48 DIYSRLLRERIIFLGTAIDDKLADSIVAQLLYLEADDPEKDIYIYINSPGGSVYAGMAIY 107
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C G A + FLL+GG KG R +P SRI + P G A+GQA DI
Sbjct: 108 DTMQQIKPDVSTICYGIAASMGAFLLSGGAKGKRLGLPNSRIMIHQPLGGAQGQASDIEI 167
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L +++ + + L+ TGQP EKI+ D R S EA EYGLID +I
Sbjct: 168 QAKEILYIKNKLNQLLADHTGQPLEKISLDTERDFYMSSTEAQEYGLIDEVI 219
>gi|78043074|ref|YP_359188.1| ATP-dependent Clp protease proteolytic subunit [Carboxydothermus
hydrogenoformans Z-2901]
gi|90101405|sp|Q3AF96.1|CLPP_CARHZ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77995189|gb|ABB14088.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Carboxydothermus hydrogenoformans Z-2901]
Length = 195
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+W+ L ++R IFIG ID+ +N ++A ML+L++ D K +
Sbjct: 5 VPIVIEQTSRGERSY---DIWSRLLKDRTIFIGGPIDDHVANLVIAQMLFLEAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA G KG R ++P +RI
Sbjct: 62 HLYINSPGGVITAGMAIYDTMQYIKPDVSTICIGQAASMGAFLLAAGAKGKRFSLPYARI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+LR+RD + + L++ TGQP EKI +D R + EA
Sbjct: 122 MIHQPLGGVQGQATDIDIHAREILRMRDMLNELLTKHTGQPKEKIERDTERDFFMSAAEA 181
Query: 251 LEYGLIDRII 260
EYG+ID +I
Sbjct: 182 KEYGIIDEVI 191
>gi|386319889|ref|YP_006016052.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
gi|323465060|gb|ADX77213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus pseudintermedius ED99]
Length = 195
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +LR R+ + K LS +TGQP EKI KD R +QEA
Sbjct: 122 IHQPLGGAQGQATEIEIAAKHILRTRERLNKILSERTGQPIEKIEKDTDRDNFLTAQEAK 181
Query: 252 EYGLIDRIIRPPR 264
EYGLID ++ P +
Sbjct: 182 EYGLIDEVMEPEK 194
>gi|374411916|gb|AEZ48942.1| clp protease proteolytic subunit [Syngonanthus chrysanthus]
Length = 199
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 122/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+ GE W+DL N LYR+R++F+GQ +D E SNQI+ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSSGEEDAVWIDL-NRLYRQRLLFLGQEVDNEISNQIVGLMVYLSLEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICIGLAASMGSFVLVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + K ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLREILTKVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G+ID +
Sbjct: 180 ATEAQTHGIIDIV 192
>gi|124025671|ref|YP_001014787.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL1A]
gi|123960739|gb|ABM75522.1| Clp protease subunit [Prochlorococcus marinus str. NATL1A]
Length = 205
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 124/194 (63%), Gaps = 6/194 (3%)
Query: 66 AMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
+M+PI + G G + D+++ L RER++F+G+ + + +N+I+A +L+L++ D
Sbjct: 9 SMIPI-----VIEESGRGERAF-DIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEADD 62
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K +++YIN PGG V L I+DTMQ +K + T CVG A + FLL G KG RS++
Sbjct: 63 PDKDIFLYINSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLCAGAKGKRSSL 122
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
SRI + P G ARGQA DIR +ADE+L ++D + KELS +TGQP E+I +D R
Sbjct: 123 LHSRIMIHQPLGGARGQASDIRIQADEILFIKDKLNKELSDRTGQPIERIREDTDRDFYM 182
Query: 246 GSQEALEYGLIDRI 259
EA+EYG+ID +
Sbjct: 183 SPSEAIEYGIIDNV 196
>gi|115604958|ref|YP_784411.1| clp protease proteolytic subunit [Drimys granadensis]
gi|122164416|sp|Q06GX2.1|CLPP_DRIGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112032686|gb|ABH88321.1| clp protease proteolytic subunit [Drimys granadensis]
Length = 202
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + + EA+ELL++R+ + + ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDVV 193
>gi|123966075|ref|YP_001011156.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9515]
gi|123200441|gb|ABM72049.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9515]
Length = 196
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/178 (45%), Positives = 117/178 (65%)
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
GS + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +YMYIN PGG V
Sbjct: 11 GSERVFDIYSRLLRERIIFLGEQVTSDTANRIVAQLLFLEAEDPEKDIYMYINSPGGSVY 70
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
L I+DTMQ +K + T CVG A + FLLA G KG RS++ SRI + P G ARGQ
Sbjct: 71 DGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLAAGTKGKRSSLRHSRIMIHQPLGGARGQ 130
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A DIR +ADE+L +++ + ELS +TG+ E I +D R EA+EYGLID ++
Sbjct: 131 ASDIRIQADEILYLKERLNSELSERTGKNLETIKEDTDRDFYMSPLEAVEYGLIDLVL 188
>gi|116074350|ref|ZP_01471612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
gi|116069655|gb|EAU75407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9916]
Length = 229
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/216 (40%), Positives = 128/216 (59%), Gaps = 10/216 (4%)
Query: 57 NDKPIRGR------IAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNID 107
+ PI+ R A+MP P VL G G + D+++ L RER+IF+G ID
Sbjct: 6 SSHPIQNRWTGIRPTAVMPSAAPGVLPTVVEQSGRGERAF-DIYSRLLRERIIFLGTGID 64
Query: 108 EEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAY 167
++ ++ ++A +L+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A
Sbjct: 65 DQVADALVAQLLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAA 124
Query: 168 HLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + ++
Sbjct: 125 SMGAFLLSGGTKGKRLALPNARIMIHQPMGGAQGQAVDIEIQAQEILYLKETLNGLMAEH 184
Query: 228 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 263
TGQP E I +D R EA+EYGLIDR++ P
Sbjct: 185 TGQPLETIAEDTDRDHFLSPAEAVEYGLIDRVVDSP 220
>gi|351653785|ref|YP_004891401.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Pseudotsuga sinensis var. wilsoniana]
gi|347977619|dbj|BAK86574.1| ATP-dependent Clp protease proteolytic subunit [Pseudotsuga
sinensis var. wilsoniana]
gi|356998483|gb|AET46374.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Pseudotsuga menziesii var. menziesii]
Length = 196
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGLFDVMQIIVPDVHTVCMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D NE+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGPAADFHNESKHVTMLRDYITKCYIERTGNPGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDAV 193
>gi|197294136|ref|YP_002149757.1| clp protease proteolytic subunit [Cicer arietinum]
gi|197089824|gb|ACH41094.1| clp protease proteolytic subunit [Cicer arietinum]
Length = 197
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV + PG+ W+DL+N L++ER++F+GQ ++ E SNQ++ M+YL D +
Sbjct: 1 MPLGVPKVPFLVPGDDEASWIDLYNRLFQERLLFLGQEVNSEISNQLVGLMVYLSLEDKN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG+V +AI+DTMQ +++ V T CVG A + +L GGE R A P
Sbjct: 61 KDLYLFINSPGGEVISGMAIFDTMQFVEAEVQTVCVGLAASMGSLILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQ + EA+ELL++R I +++TG+P +I+KD+ R
Sbjct: 121 ARVMIHQPATSFYEGQTVECMLEANELLQMRRNITNIYAQRTGKPSWQISKDMERDLFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YGL+D +
Sbjct: 181 AEEAQAYGLVDMV 193
>gi|72382132|ref|YP_291487.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. NATL2A]
gi|115311342|sp|Q46L44.1|CLPP1_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|72001982|gb|AAZ57784.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
Length = 196
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 80/185 (43%), Positives = 120/185 (64%), Gaps = 1/185 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+G+ + + +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIVFLGEPVTSDSANRIVAQLLFLEADDPDKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K + T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHVKPDIHTVCVGLAASMGAFLLCAGAKGKRSSLLHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L ++D + KELS +TGQP E+I +D R EA+EYG
Sbjct: 123 PLGGARGQASDIRIQADEILFIKDKLNKELSDRTGQPIERIREDTDRDFYMSPSEAIEYG 182
Query: 255 LIDRI 259
+ID +
Sbjct: 183 IIDNV 187
>gi|403381812|ref|ZP_10923869.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JC66]
Length = 193
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/188 (44%), Positives = 118/188 (62%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R++F+G ID+ +N I+A +L+L + D K ++M
Sbjct: 5 PYVVEQT-GRGERSY-DIYSRLLKDRIVFVGAAIDDALANSIVAQLLFLQAEDPDKDIHM 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG + I+DTMQ +K V T C GFA A LL G KG R A+P S I +
Sbjct: 63 YINSPGGSTSAGFGIFDTMQYIKPQVNTICTGFAASFASLLLLAGAKGKRFALPNSEIMI 122
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI A +L+VR+ I K S +TGQP EKI KD+ R ++EALE
Sbjct: 123 HQPHGGAQGQASDIAISARRILQVREKIVKITSERTGQPIEKIEKDMDRDYFMSAEEALE 182
Query: 253 YGLIDRII 260
YG+ID+II
Sbjct: 183 YGIIDKII 190
>gi|397905705|ref|ZP_10506547.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
gi|397161224|emb|CCJ33882.1| ATP-dependent Clp protease proteolytic subunit [Caloramator
australicus RC3]
Length = 196
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 86/190 (45%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G I+++ +N ++A +L+L+S D K +
Sbjct: 4 VPIVVEQTARGERSY---DIYSRLLKERIIFLGDEINDQTANLVIAQLLFLESEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG ++ LAIYDTMQ +K V T CVG A +A LLA G KG R A+P S I
Sbjct: 61 YLYINSPGGVISAGLAIYDTMQYIKPDVSTICVGMAASMAAVLLAAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G ARGQA DI A+ +L+++ + + LS +TGQP E+I KD R + EA
Sbjct: 121 MIHQPLGGARGQATDIAIHAEHILKLKKRLNEILSERTGQPIERIEKDTDRDNFMTALEA 180
Query: 251 LEYGLIDRII 260
EYGLID +I
Sbjct: 181 KEYGLIDDVI 190
>gi|349589908|gb|AEP94879.1| clp protease proteolytic subunit [Vigna unguiculata]
Length = 197
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 125/194 (64%), Gaps = 2/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG P+V +RTPG+ WVD L N LYRER++F+GQ++D E SNQ+++ M+YL +
Sbjct: 1 MPIGVPRVPFRTPGDKDASWVDILINRLYRERLLFLGQDVDSEISNQLISIMIYLSIEKE 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K + ++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGG R A P
Sbjct: 61 NKELSLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFP 120
Query: 187 LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+R+ + PA + QA + EA+ELL++R+ I + ++TG+P I++D+ R
Sbjct: 121 HARVMIHQPASSFYEAQAGEFVLEAEELLKMRETITRVYVQRTGKPLWVISEDMERDVFM 180
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 SAAEAQAHGIVDLV 194
>gi|114329680|ref|YP_740501.1| clp protease proteolytic subunit [Citrus sinensis]
gi|122166158|sp|Q09MF2.1|CLPP_CITSI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113952646|gb|ABI49044.1| clp protease proteolytic subunit [Citrus sinensis]
Length = 196
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR+PG+ WVD++N LYRER++F+GQ ++ + SNQ++ M+YL +++
Sbjct: 1 MPIGVPKVPYRSPGDKHPSWVDIYNRLYRERLLFLGQMVESDISNQLIGIMVYLSIENET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLA G R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTICMGLAASMGSFLLAAGASTKRLAFPH 120
Query: 188 SRIALDSPAGAARG-QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P GA G Q + + +ELLR+R+ + +++G+P +++D+ R
Sbjct: 121 ARVMIHQPIGAFYGAQTGEFILDTEELLRLREILTMVYVQRSGKPLWVVSEDMERDTFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +GL+D +
Sbjct: 181 ATEAQAHGLVDLV 193
>gi|113475211|ref|YP_721272.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110166259|gb|ABG50799.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 203
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 123/187 (65%), Gaps = 2/187 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L R+R+I++G+ ID E +N I+ +LYLDS D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRDRIIYLGEAIDSELANLIVGQLLYLDSEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + IYDTM+ ++ V T C+G A + FLL+GG KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGIYDTMRHVRPDVCTICMGIAASMGAFLLSGGTKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ Y+ + L+ TGQ EKIT+D R + EA+E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKKYLNECLAEHTGQSIEKITEDTERDFFMSATEAME 180
Query: 253 YGLIDRI 259
YG+ID++
Sbjct: 181 YGIIDQV 187
>gi|308069047|ref|YP_003870652.1| ATP-dependent Clp protease proteolytic subunit (endopeptidase Clp)
[Paenibacillus polymyxa E681]
gi|305858326|gb|ADM70114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Paenibacillus polymyxa E681]
Length = 194
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 119/194 (61%), Gaps = 4/194 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M + P V+ +T GE S+ D+++ L ++R++F+G ID+ +N I+A +L+L + D
Sbjct: 1 MSVYVPYVVEQTAQGERSY---DIYSRLLKDRIVFVGAAIDDHLANSIIAQLLFLAAEDP 57
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +YMYIN PGG + AIYDTMQ +K V T C GFA LL G KG RSA+P
Sbjct: 58 EKEIYMYINSPGGSTSAGFAIYDTMQYIKPDVHTICTGFAASFGAILLLAGAKGKRSALP 117
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
S I + P G A+GQA DI A +L R+ + + +TGQ FEK+ KD+ R
Sbjct: 118 NSEIMIHQPHGGAQGQASDIAISAKRILWTREKATRITAERTGQSFEKVEKDMDRDFYMS 177
Query: 247 SQEALEYGLIDRII 260
+QEALEYG+ID++I
Sbjct: 178 AQEALEYGVIDQVI 191
>gi|372000213|gb|AEX65183.1| ATP-dependent Clp protease proteolytic subunit [Anredera
baselloides]
Length = 195
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E +NQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDV-NRLYRERLLFLGQEVDSEIANQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AI+DTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIFDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P ++ D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGKPLWVVSDDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|159904323|ref|YP_001551667.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
gi|159889499|gb|ABX09713.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9211]
Length = 200
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 67 MMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDS 123
M PI P VL G G + D+++ L RER+IF+G +++++ ++ ++A ML+L++
Sbjct: 1 MYPISGPGVLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEA 59
Query: 124 VDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRS 183
D K + +YIN PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R
Sbjct: 60 EDPEKDIQLYINSPGGSVTAGLAIYDTMQQVTPDVVTICYGLAASMGAFLLSGGTKGKRV 119
Query: 184 AMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIK 243
++P SRI + P G A+GQA +I +A E+L +++ + LS TGQP +KI +D R
Sbjct: 120 SLPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNGLLSEHTGQPIDKIAEDTDRDH 179
Query: 244 RFGSQEALEYGLIDRII 260
QEA+EYGLID++I
Sbjct: 180 FLSPQEAVEYGLIDKVI 196
>gi|374411888|gb|AEZ48928.1| clp protease proteolytic subunit [Lomandra longifolia]
Length = 203
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 122/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNSLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|427418189|ref|ZP_18908372.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
gi|425760902|gb|EKV01755.1| protease subunit of ATP-dependent protease [Leptolyngbya sp. PCC
7375]
Length = 212
Score = 165 bits (417), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 88/204 (43%), Positives = 119/204 (58%), Gaps = 14/204 (6%)
Query: 74 KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMY 133
+V Y PG W WV+++ + +ER++F+ Q + + +N +++ LYLDS D K +Y+Y
Sbjct: 8 RVPYNLPGSQRWTWVNIYTRMSQERILFLNQPLTDGVANSLISAFLYLDSEDPGKPIYLY 67
Query: 134 INGPGG--------------DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
IN G +T LAIYDTM+ +KS V T C+G A ++ LL+ G K
Sbjct: 68 INSLGDPVMAGMADGSAGMMSITSGLAIYDTMRHIKSDVITICMGQAIGMSAVLLSCGAK 127
Query: 180 GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDL 239
G RS++P S IAL P RGQA DI ADE+L I K LS TGQP EKI KD+
Sbjct: 128 GKRSSLPNSSIALVHPYSGTRGQATDIELNADEVLSKSGLITKLLSENTGQPEEKIHKDM 187
Query: 240 SRIKRFGSQEALEYGLIDRIIRPP 263
RI QEA+EYGL+DR+I P
Sbjct: 188 ERIFYLTPQEAIEYGLLDRVIEKP 211
>gi|383787009|ref|YP_005471578.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
gi|383109856|gb|AFG35459.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium pennivorans DSM 9078]
Length = 206
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/174 (47%), Positives = 113/174 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID+ +N ++A +L+L++ + K + +YIN PGG VT LAIY
Sbjct: 30 DIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPGGLVTAGLAIY 89
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LLA G KG R A+P SRI + P G A G A D+
Sbjct: 90 DTMQYVKCDVATICIGQAASMAAVLLAAGAKGKRFALPNSRIMIHQPLGGAEGTAKDVEI 149
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
ELLR++ I + LS+ TGQP EKI KD R +QEA EYG+IDR+I P
Sbjct: 150 LTKELLRIKHLINEILSKHTGQPIEKIEKDTDRDFFMSAQEAKEYGIIDRVIMP 203
>gi|333368408|ref|ZP_08460607.1| ATP-dependent Clp protease, protease subunit [Psychrobacter sp.
1501(2011)]
gi|332977273|gb|EGK14064.1| ATP-dependent Clp protease, protease subunit [Psychrobacter sp.
1501(2011)]
Length = 240
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 130/198 (65%), Gaps = 6/198 (3%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE S+ D+++ L RERVIF+ +++ +N I+A ML+L++ + K +
Sbjct: 46 VPMVVEQSARGERSF---DIYSRLLRERVIFLTGQVEDNMANLIVAQMLFLEAENPDKDI 102
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LA++DTM +K V T C+G AY + FLLA G+KG R A+ SR+
Sbjct: 103 HLYINSPGGSVSAGLAMFDTMNFIKPDVSTICMGGAYSMGSFLLAAGQKGKRYALANSRV 162
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI A E+L++RD + + L+ +TGQP EKI +D+ R +QEA
Sbjct: 163 MIHQPSGGAQGQATDIEINAREILKIRDRLNRILAERTGQPLEKIERDVERDYWLDAQEA 222
Query: 251 LEYGLIDRII--RPPRIK 266
EYGL+D ++ RP +K
Sbjct: 223 KEYGLVDEVLERRPEELK 240
>gi|68164829|ref|YP_247625.1| ATP-dependent Clp protease proteolytic subunit [Cucumis sativus]
gi|67511424|emb|CAJ00784.1| ATP-dependent Clp protease proteolytic subunit [Cucumis sativus]
Length = 195
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PGE WVDL+N LYR+R++F+GQ+++ E SNQI+ M+YL D +
Sbjct: 1 MPVGVPKVPFRLPGEEDASWVDLYNRLYRQRLLFLGQDVNNEISNQIMGLMVYLSIEDGT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K Y++IN PGG V P + ++DTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDQYLFINSPGGSVIPGVGLFDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + ++G+ + E+ ELL +R+ I K ++TG+P I +D+ R
Sbjct: 121 ARVMIHQPASSFSKGKTGEFVLESTELLNLRETITKVYVQRTGKPLWVIPEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 APEAQAHGIVDLV 193
>gi|116070498|ref|ZP_01467767.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
gi|116065903|gb|EAU71660.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
BL107]
Length = 197
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A GQA DIR +ADE+L ++D + ELS +TGQP ++I +D R EA+ YG
Sbjct: 123 PLGGASGQASDIRIQADEILYLKDRLNTELSDRTGQPLDRIQEDTDRDFFMSPSEAVSYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDSVI 188
>gi|114107071|ref|YP_740227.1| clp protease proteolytic subunit [Liriodendron tulipifera]
gi|122227470|sp|Q0G9J4.1|CLPP_LIRTU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113201019|gb|ABI32534.1| clp protease proteolytic subunit [Liriodendron tulipifera]
Length = 202
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAIWVDVFNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P ++IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 AAEAQAHGIVDLV 193
>gi|403252433|ref|ZP_10918743.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
gi|402812446|gb|EJX26925.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. EMP]
Length = 201
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 114/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K VY+YIN PGG VT LAIY
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 85
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A LLA G KG R A+P +RI + P G A G A D+
Sbjct: 86 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEI 145
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
ELLR++D + + LS+ TGQP EKI KD R ++EA EYG++D+++
Sbjct: 146 ITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 197
>gi|86610014|ref|YP_478776.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
gi|115311349|sp|Q2JIP1.1|CLPP2_SYNJB RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86558556|gb|ABD03513.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-2-3B'a(2-13)]
Length = 200
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 114/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L R+R+IF+G +D++ +N I+A MLYL+S D K +Y+YIN PGG V +AIY
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIY 76
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI
Sbjct: 77 DTMQHIQPDVSTICIGLAASMGAFLLAGGTKGKRIALPHARIMIHQPLGGAQGPATDIEI 136
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L +++ + L+ TGQP E+I +D R ++A EYGLID++I
Sbjct: 137 QAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
>gi|113953920|ref|YP_730624.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9311]
gi|113881271|gb|ABI46229.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 196
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +++Y+
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTSDSANRIVAQLLFLEAEDPEKEIFLYV 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A GQA DIR +ADE+L ++D + EL+ +TGQP +KI D R Q+A+EYG
Sbjct: 123 PLGGASGQASDIRIQADEILFLKDRLNHELADRTGQPLDKIQADTDRDFFMSPQQAMEYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDNVI 188
>gi|119774361|ref|YP_927101.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
amazonensis SB2B]
gi|171704645|sp|A1S4X5.1|CLPP_SHEAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119766861|gb|ABL99431.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
amazonensis SB2B]
Length = 202
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S + K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESENPDKEI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPKVSTVCIGQACSMGAFLLAGGEKGMRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L ++ + + LS TGQP E I +D R + +A
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKHKLNQMLSHHTGQPMEVIERDTDRDNFMSATQA 189
Query: 251 LEYGLIDRII 260
+EYGLID ++
Sbjct: 190 VEYGLIDSVL 199
>gi|222100864|ref|YP_002535432.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
gi|221573254|gb|ACM24066.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
neapolitana DSM 4359]
Length = 200
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 114/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K VY+YIN PGG VT LAIY
Sbjct: 26 DIFSRLLKDRIVFLGSPIDDHVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 85
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A LLA G KG R A+P +RI + P G A G A D+
Sbjct: 86 DTMQYIKCDVSTICVGQAASMAAVLLAAGTKGKRYALPNARIMIHQPLGGAEGPAKDVEI 145
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
ELLR++D + + LS+ TGQP EKI KD R ++EA EYG++D+++
Sbjct: 146 ITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 197
>gi|188585728|ref|YP_001917273.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
gi|259585960|sp|B2A158.1|CLPP_NATTJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|179350415|gb|ACB84685.1| ATP-dependent Clp protease proteolytic subunit ClpP [Natranaerobius
thermophilus JW/NM-WN-LF]
Length = 197
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 126/194 (64%), Gaps = 5/194 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IFIG I+++ +N ++A ML+L+S D K ++
Sbjct: 5 PMVIEQTNRGERSY---DIYSRLLKDRIIFIGTGINDDIANSVIAQMLFLESEDPDKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V LAIYDTMQ ++S V T CVG A + LLA G +G R +P SRI
Sbjct: 62 LYINSPGGHVHAGLAIYDTMQYIRSDVSTICVGMAASMGAVLLAAGNEGKRFCLPNSRIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
L P G A+GQA D+ A E+++ ++ + + L+ TGQP E+I+KD R S+EA
Sbjct: 122 LHQPMGGAQGQAADVEIHAREIMKTKERLNQILAHHTGQPVEQISKDTDRDFFMSSEEAQ 181
Query: 252 EYGLIDRII-RPPR 264
+YG+ID ++ RPP
Sbjct: 182 KYGVIDDVLKRPPE 195
>gi|86605879|ref|YP_474642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
gi|115311348|sp|Q2JV68.1|CLPP2_SYNJA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|86554421|gb|ABC99379.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. JA-3-3Ab]
Length = 200
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 114/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L R+R+IF+G +D++ +N I+A MLYL+S D K +Y+YIN PGG V +AIY
Sbjct: 17 DIYSRLLRDRIIFLGTQVDDDIANLIVAQMLYLESEDPEKDIYLYINSPGGSVYAGMAIY 76
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C+G A + FLLAGG KG R A+P +RI + P G A+G A DI
Sbjct: 77 DTMQHIQPDVSTICIGLAASMGAFLLAGGAKGKRIALPHARIMIHQPLGGAQGPATDIEI 136
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L +++ + L+ TGQP E+I +D R ++A EYGLID++I
Sbjct: 137 QAKEILFIKNSLNSLLAYHTGQPLERIERDTDRDNFMTPEQAKEYGLIDQVI 188
>gi|254432364|ref|ZP_05046067.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626817|gb|EDY39376.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 235
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 88/215 (40%), Positives = 131/215 (60%), Gaps = 9/215 (4%)
Query: 49 KSLYSGIRNDKPIRGRIAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQN 105
++L++G R + I MP+ P VL G+G + D+++ L RER+IF+G
Sbjct: 16 QNLWAGPRPEATIG-----MPMAAPGVLPTVVEQSGKGERAF-DIYSRLLRERIIFLGTG 69
Query: 106 IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 165
ID+ ++ ++A +L+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G
Sbjct: 70 IDDAVADALVAQLLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGL 129
Query: 166 AYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELS 225
A + FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L ++D + ++
Sbjct: 130 AASMGAFLLSGGTKGKRLALPSARIMIHQPLGGAQGQAVDIEIQAKEILFLKDTLNGLMA 189
Query: 226 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
TGQP EKI +D R EA++YGLIDR++
Sbjct: 190 EHTGQPLEKIAEDTDRDYFLSPAEAVDYGLIDRVV 224
>gi|254446451|ref|ZP_05059927.1| Clp protease [Verrucomicrobiae bacterium DG1235]
gi|198260759|gb|EDY85067.1| Clp protease [Verrucomicrobiae bacterium DG1235]
Length = 182
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/181 (45%), Positives = 116/181 (64%)
Query: 88 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI 147
+D+++ L ++R++FIG I++E +N I+A +L+L D K + +YIN PGG VT +AI
Sbjct: 1 MDIYSRLLKDRIVFIGTPINDEIANAIIAQLLFLQMEDPKKDINVYINSPGGSVTSGMAI 60
Query: 148 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIR 207
YDTM L V T C+G A + LLAGG KG R A+P SR+ + P+G A GQA DI
Sbjct: 61 YDTMNFLSCEVSTWCIGMAASMGTILLAGGTKGKRYALPNSRVMIHQPSGGAGGQASDIS 120
Query: 208 NEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E++R R+ + K L+ KTGQ E+I KD R SQEALEYG+ID++ + K
Sbjct: 121 IQAKEIIRWRETLNKVLAEKTGQSVERIQKDSDRDYWMTSQEALEYGVIDKVYSGNQSKS 180
Query: 268 D 268
D
Sbjct: 181 D 181
>gi|295112117|emb|CBL28867.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synergistetes
bacterium SGP1]
Length = 195
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R++F+G + ++ +N I+A +L+L+S D K +++
Sbjct: 7 PYVIEQT-GRGERSY-DIYSRLLKDRIVFLGTQVMDDVANSIVAQLLFLESEDPDKDIHL 64
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT +AIYDTMQ +KSPV T CVG A +A LL+GG +G R A+P + + +
Sbjct: 65 YINSPGGSVTAGMAIYDTMQYIKSPVSTICVGMAASMAAILLSGGARGKRLALPNAEVMI 124
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G GQA DI A +L R + L+R TGQ EK+ +D R +QEAL+
Sbjct: 125 HQPLGGTSGQASDIEIHARNILNTRKRMNAILARHTGQDVEKVAQDTDRDNFMTAQEALD 184
Query: 253 YGLIDRII 260
YGLIDRII
Sbjct: 185 YGLIDRII 192
>gi|218295537|ref|ZP_03496350.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
aquaticus Y51MC23]
gi|218244169|gb|EED10695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
aquaticus Y51MC23]
Length = 194
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 118/172 (68%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N I+A +L+LD+ + ++ + +YIN PGG+V LAIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANTIVAQLLFLDAQNPNQEIRLYINSPGGEVDAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +++PV T +G A +A +LA GEKG R A+P S++ + P G ARG A DI
Sbjct: 78 DTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGARGTASDIAI 137
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L+ + + + L++ TGQP EK+ +D R +QEALEYGLID+++
Sbjct: 138 QAQEILKAKKLLNEILAKHTGQPLEKVERDTDRDYYLSAQEALEYGLIDQVV 189
>gi|372450165|ref|YP_005090203.1| clpP gene product (chloroplast) [Ricinus communis]
gi|339516191|gb|AEJ82581.1| ATP-dependent Clp protease proteolytic subunit [Ricinus communis]
Length = 195
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D E SNQ++ M+YL ++
Sbjct: 1 MPIGVPKVPFRNPGEDDSIWIDV-NRLYRERLLFLGQDVDSEISNQLIGLMVYLSIESET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A +A F+L GG+ R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMASFILVGGKITKRLAFPH 119
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P AG Q + EA+ELL++R+ + + +++TG+P +++D+ R
Sbjct: 120 ARVMIHQPIAGFYEAQIGEFVLEAEELLKLREILTRIYAQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 AAEAQAHGIVDLV 192
>gi|338729930|ref|YP_004659322.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
gi|335364281|gb|AEH50226.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
thermarum DSM 5069]
Length = 202
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 115/177 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K +++YIN PGG VT LAIY
Sbjct: 25 DIYSRLLKDRIVFLGYPIDDHTANLVVAQLLFLEAEDPDKDIHLYINSPGGSVTAGLAIY 84
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LLA G KG R A+P +RI L P G A G D+
Sbjct: 85 DTMQYVKCDVVTICIGQAASMAAVLLASGTKGKRYALPNARIMLHQPLGGAEGPVKDVEI 144
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 265
ELLR+++ I K LS KTGQP E+I KD R + EAL YGLID++I P ++
Sbjct: 145 ITKELLRIKNLINKILSEKTGQPIERIEKDTDRDFFMDAYEALNYGLIDKVIEPKKV 201
>gi|374411852|gb|AEZ48911.1| clp protease proteolytic subunit, partial [Apostasia wallichii]
Length = 201
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 125/202 (61%), Gaps = 2/202 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ ++YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLLVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P ++IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGISIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRIIRPPRIKED 268
+ EA +G++D + ED
Sbjct: 180 ATEAQTHGIVDLVAVEKENTED 201
>gi|374411880|gb|AEZ48924.1| clp protease proteolytic subunit, partial [Iris virginica]
Length = 196
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 122/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLFLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++T P I++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRENLTKVYVQRTSNPLWVISEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|159903385|ref|YP_001550729.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9211]
gi|159888561|gb|ABX08775.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9211]
Length = 196
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 123/193 (63%), Gaps = 3/193 (1%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTNDSANRIVAQLLFLEAEDPEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DT++ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTIEHVKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLKHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L ++D + EL+ +TGQP E+I++D R EALEYG
Sbjct: 123 PLGGARGQASDIRIQADEILFLKDRLNNELAERTGQPIERISQDTDRDFYMSPDEALEYG 182
Query: 255 LIDRII--RPPRI 265
+ID I RP I
Sbjct: 183 IIDNIFNKRPVNI 195
>gi|428209784|ref|YP_007094137.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
gi|428011705|gb|AFY90268.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Chroococcidiopsis thermalis PCC 7203]
Length = 202
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ ID +N I+A +LYLD+ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQAIDSNLANLIVAQLLYLDAEDGEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + + L+ TGQP E+I +D R QEA++YG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYHKRKLNEHLAEHTGQPLERIEQDTERDFFMSPQEAMDYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|282899048|ref|ZP_06307029.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
gi|281195964|gb|EFA70880.1| Peptidase S14, ClpP [Cylindrospermopsis raciborskii CS-505]
Length = 201
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+GQ +D +N I+A +L+LDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM++++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKNIRPNVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + + L+ TGQPF++I +D R QEA EYG
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQEAREYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|317970010|ref|ZP_07971400.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CB0205]
Length = 196
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 122/192 (63%), Gaps = 3/192 (1%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+G+ + E +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLTHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DIR +ADE+L ++ + +ELS +TGQP +I D R EA+EYG
Sbjct: 123 PLGGAQGQASDIRIQADEILYLKKKLNQELSDRTGQPLNRIEDDTDRDFFMSPAEAVEYG 182
Query: 255 LIDRII--RPPR 264
LID++I RP R
Sbjct: 183 LIDKVIDKRPVR 194
>gi|88808603|ref|ZP_01124113.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
gi|88787591|gb|EAR18748.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 7805]
Length = 196
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSESANRIVAQLLFLEAEDPEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLRHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L +++ + +EL+ +T QP EKI +D R EA +YG
Sbjct: 123 PLGGARGQASDIRIQADEILFLKNRLNQELAERTSQPLEKIQEDTDRDFFMSPHEAADYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDSVI 188
>gi|374411860|gb|AEZ48915.1| clp protease proteolytic subunit, partial [Chamaedorea seifrizii]
Length = 195
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 122/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDAT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQVHGIVDLV 192
>gi|332981496|ref|YP_004462937.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
gi|332699174|gb|AEE96115.1| ATP-dependent Clp protease proteolytic subunit ClpP [Mahella
australiensis 50-1 BON]
Length = 194
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 118/180 (65%), Gaps = 3/180 (1%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L +ER++F+ +D+ ++ ++A ML+L+S D K +++YIN PGG
Sbjct: 14 GERSY---DIYSRLLKERIVFLDGEVDDATASLVVAQMLFLESEDPDKDIHLYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT AIYDTMQ +K V T C+G A + FLLA G KG R A+P S I + P G AR
Sbjct: 71 VTAGFAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRYALPNSEILIHQPMGGAR 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
GQA DI A++++R++ + + LS +TGQP+EKI KD R +QEA EYG++D +I
Sbjct: 131 GQATDIMIHAEQIVRIKRRLNEILSERTGQPYEKIEKDTDRDFFMSAQEAKEYGIVDEVI 190
>gi|346683318|ref|YP_004842263.1| clp protease proteolytic subunit [Pyrus pyrifolia]
gi|345433585|dbj|BAK69407.1| clp protease proteolytic subunit [Pyrus pyrifolia]
Length = 195
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D++ LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPRVPFRSPGEEDALWIDIYR-LYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFILEAEELLKLRETVTRVYVQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|340034221|ref|YP_004733784.1| clp protease proteolytic subunit [Acidosasa purpurea]
gi|309321641|gb|ADO65166.1| clp protease proteolytic subunit [Acidosasa purpurea]
Length = 216
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D++
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 RDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|78211620|ref|YP_380399.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260436691|ref|ZP_05790661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
gi|78196079|gb|ABB33844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
gi|260414565|gb|EEX07861.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. WH 8109]
Length = 224
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 128/209 (61%), Gaps = 5/209 (2%)
Query: 56 RNDKPIRGRI-AMMPIGTP---KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
R+ PI+ R A MP+ P + G G + D+++ L RER+IF+G +D+ +
Sbjct: 5 RSHHPIQNRWRAAMPVSAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVA 63
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
+ ++A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A +
Sbjct: 64 DALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGA 123
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 231
FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + ++ TGQP
Sbjct: 124 FLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQP 183
Query: 232 FEKITKDLSRIKRFGSQEALEYGLIDRII 260
+KI++D R EA+EYGLIDR++
Sbjct: 184 LDKISEDTDRDYFLSPAEAVEYGLIDRVV 212
>gi|398345034|ref|ZP_10529737.1| ATP-dependent Clp protease proteolytic subunit [Leptospira inadai
serovar Lyme str. 10]
Length = 198
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/192 (43%), Positives = 126/192 (65%), Gaps = 2/192 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IF+G I +E++N ++A +L+LD+ + + +Y+
Sbjct: 5 PVVIEQT-GRGERSY-DIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYL 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ LAIYDTMQ +K+ V T CVG A +A LLAGG KG RSA+P SRI +
Sbjct: 63 YINSPGGYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRIMM 122
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A GQA DI +A E+L++++ + ++ TG+P E+I KD R ++EA
Sbjct: 123 HQPTGGATGQASDIAIQAKEVLKLKEILNGLYTKHTGKPIEQIQKDTERDLYMTAEEAQI 182
Query: 253 YGLIDRIIRPPR 264
YG+ID +I R
Sbjct: 183 YGIIDSVISIER 194
>gi|78184632|ref|YP_377067.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9902]
gi|124013818|sp|Q3AY04.1|CLPP1_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|78168926|gb|ABB26023.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 197
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/186 (44%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A GQA DIR +ADE+L ++D + ELS +TGQP ++I +D R EA+ YG
Sbjct: 123 PLGGASGQASDIRIQADEILYLKDRLNTELSDRTGQPLDRIQEDTDRDFFMSPGEAVSYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDSVI 188
>gi|170078144|ref|YP_001734782.1| Clp protease [Synechococcus sp. PCC 7002]
gi|169885813|gb|ACA99526.1| Clp protease [Synechococcus sp. PCC 7002]
Length = 197
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 76/174 (43%), Positives = 115/174 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G ID+ ++ ++A +L+LD+ D K + +YIN PGG V +AIY
Sbjct: 21 DIYSRLLRERIVFLGTAIDDTVADSVVAQLLFLDAEDADKDIQLYINSPGGSVYAGMAIY 80
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA DI
Sbjct: 81 DTMQQIRPNVVTICYGIAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIEI 140
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
+A E+L ++D + ++ TGQPF+K+ +D R ++EA +YGLID++I P
Sbjct: 141 QAKEILYIKDKLNTLIADHTGQPFDKVAEDTERDFYMSAEEACQYGLIDQVIAP 194
>gi|319891770|ref|YP_004148645.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
gi|317161466|gb|ADV05009.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
pseudintermedius HKU10-03]
Length = 195
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +LR R+ + K LS TGQP EKI KD R +QEA
Sbjct: 122 IHQPLGGAQGQATEIEIAAKHILRTRERLNKILSELTGQPIEKIEKDTDRDNFLTAQEAK 181
Query: 252 EYGLIDRIIRPPR 264
EYGLID ++ P +
Sbjct: 182 EYGLIDEVMEPEK 194
>gi|15643458|ref|NP_228504.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|148269380|ref|YP_001243840.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
petrophila RKU-1]
gi|170288038|ref|YP_001738276.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga sp. RQ2]
gi|281411923|ref|YP_003346002.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|418045135|ref|ZP_12683231.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
gi|6685314|sp|Q9WZF9.1|CLPP_THEMA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214719|sp|A5IJ91.1|CLPP_THEP1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706553|sp|B1L812.1|CLPP_THESQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|4981218|gb|AAD35777.1|AE001741_10 ATP-dependent Clp protease, proteolytic subunit [Thermotoga
maritima MSB8]
gi|147734924|gb|ABQ46264.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermotoga
petrophila RKU-1]
gi|170175541|gb|ACB08593.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
sp. RQ2]
gi|281373026|gb|ADA66588.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
naphthophila RKU-10]
gi|351678217|gb|EHA61364.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga maritima
MSB8]
Length = 203
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 114/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K VY+YIN PGG VT LAIY
Sbjct: 28 DIFSRLLKDRIVFLGSPIDDYVANLVIAQLLFLEAEDPDKDVYLYINSPGGSVTAGLAIY 87
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A LLA G KG R A+P +RI + P G A G A D+
Sbjct: 88 DTMQYIKCDVSTICVGQAASMAAVLLAAGAKGKRYALPNARIMIHQPLGGAEGPAKDVEI 147
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
ELLR++D + + LS+ TGQP EKI KD R ++EA EYG++D+++
Sbjct: 148 ITRELLRIKDLLNRILSKHTGQPIEKIEKDTDRDFFMSAEEAKEYGIVDKVV 199
>gi|295696500|ref|YP_003589738.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
gi|295412102|gb|ADG06594.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Kyrpidia
tusciae DSM 2912]
Length = 192
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G ID++ +N ++A +L+L + D K V
Sbjct: 4 VPIVVEQTSRGERSY---DIYSRLLKDRIIFLGTPIDDQVANSVIAQLLFLAAEDPEKDV 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AI DTMQ ++ V T CVG A +A LLA G KG R A+P S I
Sbjct: 61 SLYINSPGGSVTAGMAILDTMQYIRPDVATICVGMAASMAAVLLAAGAKGKRRALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI+ AD +LRVR+ + + LS +TGQP +I +D R + + EA
Sbjct: 121 MIHQPLGGVQGQAVDIKIHADRILRVREKLNRILSERTGQPLSRIEEDTDRDRFMSADEA 180
Query: 251 LEYGLIDRIIR 261
EYGLID +IR
Sbjct: 181 KEYGLIDDVIR 191
>gi|313183847|ref|YP_004021690.1| clp protease proteolytic subunit [Prunus persica]
gi|309321459|gb|ADO65000.1| clp protease proteolytic subunit [Prunus persica]
Length = 195
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 125/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D++ LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPRVPFRSPGEEDALWIDVYR-LYRERLLFLGQGVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + +++TG+P +++D+ R
Sbjct: 120 ARVMIHQPAASFYEAQTGEFILEAEELLKLRETLTRVYAQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 AIEAQAHGIVDLV 192
>gi|149390292|ref|YP_001294123.1| clp protease proteolytic subunit [Chloranthus spicatus]
gi|160380547|sp|A6MME7.1|CLPP_CHLSC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146744212|gb|ABQ43284.1| clp protease proteolytic subunit [Chloranthus spicatus]
Length = 201
Score = 164 bits (414), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 122/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P L IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGLTIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + PA + QA + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 ARIMIHQPASSFYEAQAGEFILEAEELLKLRETLTRVYVQRTGNPLWIVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|34500938|ref|NP_904123.1| ATP-dependent Clp protease proteolytic subunit [Amborella
trichopoda]
gi|68052165|sp|Q70XY2.1|CLPP_AMBTC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|34481653|emb|CAD45131.1| ATP-dependent protease proteolytic subunit [Amborella trichopoda]
Length = 202
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R+PGE WVD++N L+RER++F+GQ ++ E SNQI+ M+YL DD+
Sbjct: 1 MPVGVPKVPFRSPGEEDATWVDIYNRLHRERLLFLGQEVEGEISNQIVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYD MQ + V T C+G A + F+LAGGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDAMQFVPPDVHTICMGLAASMGSFVLAGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + A + EA ELL++R+ I ++TG P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAPAGEFILEAGELLKLRETITSVYVQRTGNPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D I
Sbjct: 181 ATEAQAHGIVDLI 193
>gi|393396127|ref|YP_006460367.1| clp protease proteolytic subunit (chloroplast) [Vigna unguiculata]
gi|387598491|gb|AFJ91883.1| clp protease proteolytic subunit (chloroplast) [Vigna unguiculata]
Length = 196
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 123/194 (63%), Gaps = 2/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPIG P+V +RTPG+ WVD L N LYRER++F+GQ++D E SNQ+++ M+YL +
Sbjct: 1 MPIGVPRVPFRTPGDKDASWVDILINRLYRERLLFLGQDVDSEISNQLISIMIYLSIEKE 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K + ++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGG R A P
Sbjct: 61 NKELSLFINSPGGWVIPGIAIYDTMQFVQPDVQTVCLGLAASMGSFLLAGGTITKRLAFP 120
Query: 187 LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+R+ + PA + QA + EA+ELL++R+ I ++TG+P I+ D+ R
Sbjct: 121 HARVMIHQPASSFYEAQAGEFVLEAEELLKLRETITNVYVQRTGKPLWVISDDMERDVFM 180
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 SAAEAQAHGIVDLV 194
>gi|324986430|ref|YP_004276301.1| ATP-dependent Clp protease proteolytic subunit [Pinus monophylla]
gi|228016061|gb|ACP50899.1| ATP-dependent Clp protease proteolytic subunit [Pinus rzedowskii]
gi|323522525|gb|ADX94867.1| ATP-dependent Clp protease proteolytic subunit [Pinus monophylla]
gi|356996673|gb|AET44589.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
cembroides]
gi|356998049|gb|AET45946.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
remota]
gi|356998195|gb|AET46090.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
quadrifolia]
gi|356998774|gb|AET46661.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pinceana]
gi|356999502|gb|AET47379.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
maximartinezii]
gi|357000086|gb|AET47955.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
johannis]
gi|357000887|gb|AET48745.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
edulis]
gi|357001182|gb|AET49036.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
discolor]
gi|357001615|gb|AET49463.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
culminicola]
Length = 196
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++++IN PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFLFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A + NEA + +R+YI K +T P E I +DL R
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEAKHITMLRNYITKCYVERTDNPEEVIQRDLDRDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEARAYGIVDTV 193
>gi|320450477|ref|YP_004202573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
scotoductus SA-01]
gi|320150646|gb|ADW22024.1| ATP-dependent Clp protease, proteolytic, subunit ClpP [Thermus
scotoductus SA-01]
Length = 212
Score = 164 bits (414), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 117/172 (68%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N I+A +L+LD+ + ++ + +YIN PGG+V LAIY
Sbjct: 36 DIYSRLLKDRIIFLGTPIDSQVANIIVAQLLFLDAQNPNQEIRLYINSPGGEVDAGLAIY 95
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +++PV T +G A +A +LA GEKG R A+P S++ + P G RG A DI
Sbjct: 96 DTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGVRGTASDIAI 155
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L+ + + + L++ TGQP EK+ KD R +QEALEYGLID+++
Sbjct: 156 QAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVV 207
>gi|335038541|ref|ZP_08531774.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334181561|gb|EGL84093.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 5/194 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE ++ D+++ L ++R+IF+G ID++ +N ++A +L+L + D
Sbjct: 1 MPL-IPTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPIDDQVANAVVAQLLFLAAEDP 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P
Sbjct: 57 EKDISLYINSPGGSITAGMAIYDTMQYIKPKVSTICIGLAASMGAFLLAAGEKGKRFALP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
S + + P G +GQA DI A +L++RD + K L+ +TGQP E+I +D R
Sbjct: 117 NSEVMIHQPLGGTQGQASDIEIHAKRILKMRDRLNKILAERTGQPLERIERDTDRDHFMS 176
Query: 247 SQEALEYGLIDRII 260
++EA YGLID +I
Sbjct: 177 AEEAKAYGLIDEVI 190
>gi|427701944|ref|YP_007045166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
gi|427345112|gb|AFY27825.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
Length = 196
Score = 163 bits (413), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 122/192 (63%), Gaps = 3/192 (1%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + E +N+++A +L+L++ D K +++Y+
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTAESANRVVAQLLFLEAEDPEKDIFLYV 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGAKGKRSSLSHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L ++D + +EL+ +TGQ E+I D R EA+ YG
Sbjct: 123 PLGGARGQASDIRIQADEILYLKDKLNRELASRTGQDLERIQIDTDRDFFMSPAEAMAYG 182
Query: 255 LIDRII--RPPR 264
LID++I RP R
Sbjct: 183 LIDKVIEKRPVR 194
>gi|167766384|ref|ZP_02438437.1| hypothetical protein CLOSS21_00888 [Clostridium sp. SS2/1]
gi|317496812|ref|ZP_07955142.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
gi|429763602|ref|ZP_19295949.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerostipes hadrus DSM 3319]
gi|167711975|gb|EDS22554.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sp. SS2/1]
gi|291559217|emb|CBL38017.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[butyrate-producing bacterium SSC/2]
gi|316895824|gb|EFV17976.1| Clp protease [Lachnospiraceae bacterium 5_1_63FAA]
gi|429178111|gb|EKY19395.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerostipes hadrus DSM 3319]
Length = 193
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 123/191 (64%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G+ +++ + +++ +L+L+S D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKERIIFLGEEVNDVTAGLVVSQLLFLESEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLL+GG KG R A+P + I
Sbjct: 61 NLYINSPGGSVTAGMAIYDTMQYVKCDVSTMCMGMAASMGAFLLSGGTKGKRLALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA +I A+ +LR + + LS TGQP+E I KD R +QEA
Sbjct: 121 MIHQPSGGAQGQATEIEIAAEHILRTKKKLNTILSENTGQPYETIVKDTERDNWLTAQEA 180
Query: 251 LEYGLIDRIIR 261
LEYGLID+++
Sbjct: 181 LEYGLIDKVME 191
>gi|253575504|ref|ZP_04852841.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251845151|gb|EES73162.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 198
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 113/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G +++ +N I+A ML+LD+ D +K +++YIN PGG +T +AIY
Sbjct: 19 DIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLDAEDPTKDIHLYINSPGGSITAGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K+ V T CVG A + FLL G G R A+P S I + P G A GQA DI
Sbjct: 79 DTMQFIKADVSTICVGLAASMGAFLLNAGAPGKRYALPNSEIMIHQPLGGAEGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A +L++RD + + LS +TGQP E+I KD R + EA EYGLID++I
Sbjct: 139 RARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFMSAAEAKEYGLIDQVI 190
>gi|384439472|ref|YP_005654196.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp.
CCB_US3_UF1]
gi|359290605|gb|AEV16122.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp.
CCB_US3_UF1]
Length = 198
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 117/172 (68%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N I+A +L+LD+ + ++ + +YIN PGG+V LAIY
Sbjct: 22 DIYSRLLKDRIIFLGTPIDAQVANTIVAQLLFLDAQNPNQEIRLYINSPGGEVDAGLAIY 81
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +++PV T +G A +A +LA GEKG R A+P S++ + P G ARG A DI
Sbjct: 82 DTMQFVRAPVSTIVIGLAASMAAVILAAGEKGRRYALPHSKVMIHQPWGGARGTASDIAI 141
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L+ + + + L++ TGQP EK+ KD R +QEAL YGLID+++
Sbjct: 142 QAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALAYGLIDQVV 193
>gi|421858505|ref|ZP_16290772.1| Clp protease [Paenibacillus popilliae ATCC 14706]
gi|410831950|dbj|GAC41209.1| Clp protease [Paenibacillus popilliae ATCC 14706]
Length = 192
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G +++ +N I+A ML+L + D K +
Sbjct: 4 VPIVVEQTNRGERSY---DIYSRLLKDRIIFLGSQVNDMVANSIIAQMLFLQADDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T +AIYDTMQ +K V T CVG A + FLL G KG R A+P S I
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGSKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A GQA DI A +L++RD + L+ +TGQP E+I +D R ++EA
Sbjct: 121 MIHQPLGGAEGQASDIEIRARRILKLRDKLNHILAERTGQPLERIERDTDRDYFMSAEEA 180
Query: 251 LEYGLIDRIIR 261
LEYGL+D+++
Sbjct: 181 LEYGLVDKVLH 191
>gi|218248285|ref|YP_002373656.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060388|ref|YP_003138276.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168763|gb|ACK67500.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256590554|gb|ACV01441.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 201
Score = 163 bits (413), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 122/188 (64%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQEVRDENANLIVAQLLFLEAEDPDKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ TGQP +KI +D R +++ALE
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHTGQPLDKIAEDTERDFFMSAEDALE 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|78212970|ref|YP_381749.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
CC9605]
gi|78197429|gb|ABB35194.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9605]
Length = 218
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 25 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYI 83
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 84 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQ 143
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DIR +ADE+L +++ + KELS +TGQ ++I +D R EA+ YG
Sbjct: 144 PLGGAQGQASDIRIQADEILFLKERLNKELSDRTGQTLDRIQQDTDRDFFMSPTEAMNYG 203
Query: 255 LIDRII 260
LID +I
Sbjct: 204 LIDSVI 209
>gi|398814906|ref|ZP_10573583.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398035724|gb|EJL28955.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 200
Score = 163 bits (413), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G I++ +N ++A +L+L + D K ++
Sbjct: 7 PTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIH 63
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTM +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 64 LYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVM 123
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A +L++RD++ L+ +TGQP E+I KD R + EA+
Sbjct: 124 IHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAV 183
Query: 252 EYGLIDRII 260
EYGLID++I
Sbjct: 184 EYGLIDKVI 192
>gi|148242503|ref|YP_001227660.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RCC307]
gi|147850813|emb|CAK28307.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
RCC307]
Length = 196
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 121/186 (65%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + E +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFMGEPVTAESANRIVAQLLFLEAEDPDKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLLA G G RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLAAGAPGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DIR +ADE+L ++ + +EL+++TGQP ++I KD R EA EYG
Sbjct: 123 PLGGAQGQASDIRIQADEILFLKKRLNEELAQRTGQPLDRIQKDTDRDFFMSPAEAAEYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDKVI 188
>gi|152977369|ref|YP_001376886.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
cytotoxicus NVH 391-98]
gi|152026121|gb|ABS23891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cytotoxicus NVH 391-98]
Length = 193
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 122/188 (64%), Gaps = 4/188 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQFIKPNVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R +++AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLRDKLNKILAERTGQPLEVIERDTDRDNFMTAEKAL 181
Query: 252 EYGLIDRI 259
EYGLIDRI
Sbjct: 182 EYGLIDRI 189
>gi|223042116|ref|ZP_03612288.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240950344|ref|ZP_04754614.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
gi|223017093|gb|EEF15533.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
minor 202]
gi|240295155|gb|EER45974.1| ATP-dependent Clp protease proteolytic subunit ClpP [Actinobacillus
minor NM305]
Length = 197
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 125/189 (66%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +Y
Sbjct: 5 PMVVEQTSKGERSY---DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG KG R A+P +R+
Sbjct: 62 LYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G ARGQA DI+ +A E+L++++ + ++++ +GQ F+K+ D R ++EA
Sbjct: 122 IHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQSFDKVAADTERDNFMSAEEAK 181
Query: 252 EYGLIDRII 260
EYGLID+++
Sbjct: 182 EYGLIDKVL 190
>gi|226314841|ref|YP_002774737.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226097791|dbj|BAH46233.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 198
Score = 163 bits (412), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G I++ +N ++A +L+L + D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPINDTVANIVVAQLLFLQAEDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTM +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMHFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A +L++RD++ L+ +TGQP E+I KD R + EA+
Sbjct: 122 IHQPLGGAQGQASDIEIAAKRILKMRDHLNTILAERTGQPLERIQKDTDRDNFLSAAEAV 181
Query: 252 EYGLIDRII 260
EYGLID++I
Sbjct: 182 EYGLIDKVI 190
>gi|414153433|ref|ZP_11409759.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
gi|411455112|emb|CCO07662.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
hydrothermale Lam5 = DSM 18033]
Length = 195
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 116/172 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IFIG ID+ ++ ++A L+L++ D K +++YIN PGG VT LAIY
Sbjct: 20 DIYSRLLKDRIIFIGGPIDDHVADLVIAQFLFLEAEDPEKDIHLYINSPGGVVTAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T C+G A + FLLA G KG R A+P++RI + P G +GQA DI
Sbjct: 80 DTMQYIKPPVSTICLGQASSMGSFLLAAGTKGKRYALPMARIMIHQPLGGVQGQATDIDI 139
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A E+LR++D + ++L+ TGQP EK+ +D R ++EA +YG+ID ++
Sbjct: 140 HAKEILRMKDLLNEKLAYHTGQPLEKVARDTERDFFMSAEEAKQYGIIDEVM 191
>gi|242910145|ref|YP_002970669.1| Clp protease proteolytic subunit [Alsophila spinulosa]
gi|218454814|gb|ACK77151.1| Clp protease proteolytic subunit [Alsophila spinulosa]
Length = 200
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 123/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++N LYRER+ +GQ +D+E +NQ++ M+YL+ D++
Sbjct: 1 MPIGVPKVPFRLPGEEDAVWVDVYNRLYRERLPLLGQQVDDEIANQLIGIMMYLNGEDEA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K Y+Y+N PGG V +++YD MQ + V T C+G A + + GGE R A+P
Sbjct: 61 KDTYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSSISTGGEITRRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I + +++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEVLKLRDCITRVYAQRTGKPLWMISEDMERDVFLS 180
Query: 247 SQEALEYGLIDRI 259
++EA +YG+ D +
Sbjct: 181 AEEAQDYGVADPV 193
>gi|407716203|ref|YP_006837483.1| ATP-dependent Clp protease proteolytic subunit [Cycloclasticus sp.
P1]
gi|407256539|gb|AFT66980.1| ATP-dependent Clp protease proteolytic subunit [Cycloclasticus sp.
P1]
Length = 206
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 125/197 (63%), Gaps = 4/197 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L+S + K +
Sbjct: 13 VPMVVEQTARGERSY---DIYSRLLKERVIFLVGQVEDHMANLIVAQMLFLESENPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT ++IYDTMQ +K V T C+G A + LL GG +G R A+P SR+
Sbjct: 70 HLYINSPGGSVTAGMSIYDTMQFIKPDVSTMCIGQAASMGALLLTGGAEGKRFALPHSRM 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +RD + K ++ TGQP + I D R GSQ+A
Sbjct: 130 MIHQPLGGFQGQASDIDIHAKEILLIRDRLNKIMASHTGQPLDVIQGDTDRDNFMGSQQA 189
Query: 251 LEYGLIDRIIRPPRIKE 267
+EYGLID++++ I+E
Sbjct: 190 VEYGLIDQVLKTRNIEE 206
>gi|395001697|ref|YP_006503714.1| clp protease proteolytic subunit (chloroplast) [Erycina pusilla]
gi|339431326|gb|AEJ72520.1| clp protease proteolytic subunit (chloroplast) [Erycina pusilla]
Length = 202
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 122/193 (63%), Gaps = 3/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDV--RLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDNT 58
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 59 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 118
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 119 ARVMIHQPASSFYEAQAGEFILEAEELLKLRENLTKVYVQRTGNPLWVISEDMERDVFMS 178
Query: 247 SQEALEYGLIDRI 259
S EA +G++D +
Sbjct: 179 STEAQAHGIVDLV 191
>gi|282898518|ref|ZP_06306508.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
gi|281196684|gb|EFA71590.1| Peptidase S14, ClpP [Raphidiopsis brookii D9]
Length = 201
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+GQ +D +N I+A +L+LDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIVFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM++++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + + L+ TGQPF++I +D R QE+ EYG
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKRKLNEYLAEHTGQPFDRIAEDTERDFFMSPQESREYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|309322359|ref|YP_003934209.1| ATP-dependent Clp protease proteolytic subunit [Cedrus deodara]
gi|307683285|dbj|BAJ19593.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Cedrus deodara]
Length = 196
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGLFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + PA + G A D E+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 ARIMIHQPASSYYDGPAADFHKESKHVTMLRDYITKCYIERTGNPGEIIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDAV 193
>gi|217077313|ref|YP_002335031.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus TCF52B]
gi|419759889|ref|ZP_14286174.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
gi|217037168|gb|ACJ75690.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
africanus TCF52B]
gi|407514928|gb|EKF49714.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
africanus H17ap60334]
Length = 201
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 114/174 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K + +YIN PGG V+ LAIY
Sbjct: 24 DIYSRLLKDRIVFLGSAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVSAGLAIY 83
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LLAGG KG R ++P SRI + P G A G A D+
Sbjct: 84 DTMQYIKCDVATICIGQAASMGAVLLAGGTKGKRFSLPNSRIMIHQPLGGAEGPAKDVEI 143
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
ELLR+++ I + LS TGQP E+I KD R +EALEYGLID++I+P
Sbjct: 144 MTKELLRIKNKINEILSFHTGQPIERIEKDTDRDFFMTPEEALEYGLIDKVIKP 197
>gi|289523086|ref|ZP_06439940.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
gi|289503629|gb|EFD24793.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
hydrogeniformans ATCC BAA-1850]
Length = 194
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 121/194 (62%), Gaps = 2/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M + P V+ +T G G + D+++ L ++R+IF+G I+E +N ++A ML+L+S D
Sbjct: 1 MKMLVPIVIEQT-GRGERAY-DIYSRLLKDRIIFLGDVIEEHLANLVVAQMLFLESEDPD 58
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG VT L IYDTMQ +K PV T CVG A +A LLA G KG R A+P
Sbjct: 59 KDINLYINSPGGSVTAGLGIYDTMQYIKCPVSTICVGQAASMAAVLLAAGAKGKRIALPN 118
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SR+ L P G +GQA DI A E+ ++RD + + ++ T Q EK+ KD R +
Sbjct: 119 SRVMLHQPLGGVQGQATDIEIHAKEIKKIRDRLNEIIAYHTNQDIEKVAKDTDRDFFMSA 178
Query: 248 QEALEYGLIDRIIR 261
+EAL YG++D++I
Sbjct: 179 EEALAYGIVDKVIE 192
>gi|116256436|sp|Q3AJN8.2|CLPP2_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
Length = 197
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEAVTSDSANRIVAQMLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGTKGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DIR +ADE+L +++ + KELS +TGQ ++I +D R EA+ YG
Sbjct: 123 PLGGAQGQASDIRIQADEILFLKERLNKELSDRTGQTLDRIQQDTDRDFFMSPTEAMNYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDSVI 188
>gi|364532639|ref|YP_004940609.1| clpP gene product [Neottia nidus-avis]
gi|339717083|gb|AEJ88710.1| ATP-dependent Clp protease proteolytic subunit [Neottia nidus-avis]
Length = 195
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ WVD++N L+RER++F+GQ I+ E SNQ+ M+YL D++
Sbjct: 1 MPIGVPKVPFRIPGDEDASWVDIYNRLHRERLLFLGQEIESEISNQLAGLMVYLSIEDNT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVPTDVHTICMGLAASMGSFVLVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P+ + QA D EA+ELL +R+ + K ++T +P I++D+ R
Sbjct: 121 ARVMIHQPSSSFYDSQAGDFILEAEELLNLRETLTKVYVQRTCKPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|428297818|ref|YP_007136124.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428234362|gb|AFZ00152.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 201
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 116/186 (62%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+GQ ID +N I+A +LYLDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERILFLGQAIDSNVANLIVAQLLYLDSEDSEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + + L+ TGQPFEKI++D R +EA YG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYHKRRLNEYLADHTGQPFEKISEDTERDFFMSPEEAKNYG 182
Query: 255 LIDRII 260
+ID +I
Sbjct: 183 IIDEVI 188
>gi|68052061|sp|Q5QA83.1|CLPP_ACOGR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56122453|gb|AAV74350.1| ClpP [Acorus gramineus]
Length = 202
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKVL+ +PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVLFGSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++IN PGG V P + +YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFLS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|113474441|ref|YP_720502.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
gi|110165489|gb|ABG50029.1| ATP-dependent Clp protease proteolytic subunit ClpP [Trichodesmium
erythraeum IMS101]
Length = 231
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/172 (47%), Positives = 110/172 (63%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L RER+IF+G +DE +N I A ML+LD+ D K + +YIN PGG VT +AIY
Sbjct: 44 DLYSRLLRERIIFLGTQVDENLANTITAQMLFLDAEDPEKDIQLYINSPGGSVTAGMAIY 103
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R ++P SRI + P G A+GQA DI
Sbjct: 104 DTMQQVRPDVVTICYGLAASMGAFLLSGGAKGKRMSLPSSRIMIHQPLGGAQGQAVDIEI 163
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L + + + L+ TGQP EKI D R ++EA YGLID++I
Sbjct: 164 QAKEILYHKRKLNELLAEHTGQPLEKIEVDTERDFFMSAEEAKNYGLIDQVI 215
>gi|149390378|ref|YP_001294377.1| ATP-dependent Clp protease proteolytic subunit [Dioscorea
elephantipes]
gi|160380552|sp|A6MMN2.1|CLPP_DIOEL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148668070|gb|ABR01454.1| clp protease proteolytic subunit [Dioscorea elephantipes]
Length = 203
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDNEVSNQLVGLMVYLSIEDAT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + +L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGMAIYDTMQFVSPDVHTICMGLAASMGSLILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWAVSEDMERDAFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|115443583|ref|YP_778602.1| ATP-dependent Clp protease proteolytic subunit [Bigelowiella
natans]
gi|122227446|sp|Q06J25.1|CLPP_BIGNA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|110810228|gb|ABG91434.1| ATP-dependent Clp protease proteolytic subunit [Bigelowiella
natans]
Length = 195
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 119/193 (61%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKVL++ + + QWVD++ LY++R+IF+ Q +D++FSNQI++ +L+LDS
Sbjct: 1 MPIGIPKVLFKESTDTTPQWVDIYTRLYKDRIIFLFQLLDDDFSNQIISMLLHLDSESKE 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y YIN GG V ++IYDTM + S + T C+G A ++ +LA G++ R +P
Sbjct: 61 ELIYFYINSVGGSVLSGISIYDTMNFINSEIVTLCIGIASSISSLILANGKRTKRFILPH 120
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SR+ L P GQA DI E++E+LR+R + K Q ++ +D+ R S
Sbjct: 121 SRVLLHQPIMQVSGQASDILIESEEILRLRRILTKIYIENIDQTISRVARDIDRDCFLSS 180
Query: 248 QEALEYGLIDRII 260
+EA YG++D I+
Sbjct: 181 REAKNYGIVDYIL 193
>gi|33241265|ref|NP_876207.1| protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460520|sp|Q7V9L6.1|CLPP3_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33238795|gb|AAQ00860.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 216
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 123/196 (62%), Gaps = 4/196 (2%)
Query: 68 MPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+P P VL G G + D+++ L RER+IF+G +++++ ++ ++A ML+L++
Sbjct: 18 LPCSGPGVLPTVIEQSGRGERAF-DIYSRLLRERIIFLGTDVNDQIADALVAQMLFLEAE 76
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K + +YIN PGG VT LAIYDTMQ + + T C G A + FLLAGG KG R A
Sbjct: 77 DPEKDIQLYINSPGGSVTAGLAIYDTMQQVNPDIVTMCYGLAASMGAFLLAGGSKGKRLA 136
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P SRI + P G A+GQA +I +A E+L +++ + L+ TGQ EKI++D R
Sbjct: 137 LPNSRIMIHQPLGGAQGQAVEIEIQAKEILFLKETLNNLLAEHTGQSLEKISEDTDRDHF 196
Query: 245 FGSQEALEYGLIDRII 260
QEA+EYGLID+++
Sbjct: 197 LSPQEAVEYGLIDKVV 212
>gi|334139130|ref|ZP_08512526.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333603020|gb|EGL14444.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 200
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 114/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ++++ +N I+A +L+LD+ D K +++YIN PGG +T +AIY
Sbjct: 19 DIYSRLLKDRIIFLGTPVNDQVANAIIAQLLFLDAQDPDKDIHLYINSPGGSITAGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +KS V T CVG A + FLLA G KG R A+P S + + P G A GQA DI
Sbjct: 79 DTMQFIKSDVSTICVGMAASMGAFLLAAGAKGKRYALPNSEVMIHQPLGGAEGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A +L++R+ + K L+ +TGQP E+I KD R + EA YGLID++I
Sbjct: 139 RARRILKMRENLNKILAERTGQPLERIDKDTDRDYFMSAAEASAYGLIDKVI 190
>gi|262037349|ref|ZP_06010814.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
gi|261748606|gb|EEY35980.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
goodfellowii F0264]
Length = 189
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 121/186 (65%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
V+ G G + D+++ L ++R+IF+G +++ +N I+A +L+LD+ D K + MYI
Sbjct: 5 VVIENDGRGERSY-DIYSRLLKDRIIFLGGEVEDNIANSIIAQLLFLDAQDKEKDIVMYI 63
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT LAIYDTM+ +K+ V T C+G A + LLA G KG R ++P SR+ +
Sbjct: 64 NSPGGVVTAGLAIYDTMRHIKADVSTVCIGQAASMGAVLLASGAKGKRYSLPNSRVMIHQ 123
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P+G ARGQA DI+ +A E+ +++ + + LS TG+P E+I +D R S+EAL YG
Sbjct: 124 PSGGARGQATDIQIQAKEIEKIKKTLNEILSEATGKPVEEIYRDTERDNFMSSEEALAYG 183
Query: 255 LIDRII 260
+ID+I+
Sbjct: 184 IIDKIL 189
>gi|326909417|ref|YP_004327687.1| ATP-dependent Clp protease proteolytic subunit [Hevea brasiliensis]
gi|308523531|gb|ADO33581.1| ATP-dependent Clp protease proteolytic subunit [Hevea brasiliensis]
Length = 195
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D E SNQ++ M+YL ++
Sbjct: 1 MPIGVPKVPFRNPGEDDSIWIDV-NRLYRERLLFLGQDVDSEISNQLIGLMVYLSIESET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 119
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P AG Q + EA+ELL++R+ + + +++TG+P +++D+ R
Sbjct: 120 ARVMIHQPIAGFYEAQIGEFVLEAEELLKLREILTRIYAQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|338811972|ref|ZP_08624171.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
gi|337275941|gb|EGO64379.1| ATP-dependent Clp protease proteolytic subunit [Acetonema longum
DSM 6540]
Length = 202
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 79/172 (45%), Positives = 113/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++FIG ID+ +N ++A +L+L+S D K +++YIN PGG VT LAIY
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDTMANLVIAQLLFLESEDPEKDIHLYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LL G KG R A+P +R+ + P G A+GQA DI
Sbjct: 79 DTMQYIKPDVSTICLGLAASMAAILLTAGAKGKRYALPYARVMIHQPHGGAQGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A E+LR+R+ L+R +GQP EK+ +DL R QEA EYGLID ++
Sbjct: 139 HAREILRLREIGADILARHSGQPVEKVQRDLERDFFMSGQEAKEYGLIDSVL 190
>gi|67923459|ref|ZP_00516936.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|67854694|gb|EAM49976.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
Length = 262
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 136/238 (57%), Gaps = 6/238 (2%)
Query: 23 GLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGE 82
+K Q ++ G KP L R SL I + +P I P ++ G
Sbjct: 15 AVKGQGNTIGGIFKPILKTMIESR---SLDYTISSKRP--SEIYAAPESVVPMVVEQSGV 69
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
G + D+++ L RER++F+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V
Sbjct: 70 GERAF-DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVY 128
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
LAIYDTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQ
Sbjct: 129 AGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQ 188
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A +I +A E+L ++ + L+ TGQPF+ I D R +QEA++YGLID++I
Sbjct: 189 AVEIEIQAKEILYIKKRLNDMLAEHTGQPFDTIAADTERDFFMSAQEAVDYGLIDKVI 246
>gi|416405032|ref|ZP_11687843.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|357261367|gb|EHJ10638.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 262
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 91/238 (38%), Positives = 136/238 (57%), Gaps = 6/238 (2%)
Query: 23 GLKIQSPSVFGTGKPNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGE 82
+K Q ++ G KP L R SL I + +P I P ++ G
Sbjct: 15 AVKGQGNTIGGIFKPILKTMIESR---SLDYTISSKRP--SEIYAAPENVVPMVVEQSGV 69
Query: 83 GSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVT 142
G + D+++ L RER++F+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V
Sbjct: 70 GERAF-DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVY 128
Query: 143 PTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQ 202
LAIYDTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQ
Sbjct: 129 AGLAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQ 188
Query: 203 ADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A +I +A E+L ++ + L+ TGQPF+ I D R +QEA++YGLID++I
Sbjct: 189 AVEIEIQAKEILYIKKRLNDMLAEHTGQPFDTIAADTERDFFMSAQEAVDYGLIDKVI 246
>gi|218289882|ref|ZP_03494072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|258511244|ref|YP_003184678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384134931|ref|YP_005517645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|218240022|gb|EED07208.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|257477970|gb|ACV58289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289016|gb|AEJ43126.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 192
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IF+G ID++ +N ++A +L+L + D K +
Sbjct: 5 PYVIEQTSRGERSY---DIYSRLLKDRIIFLGTPIDDDVANAVVAQLLFLAADDPDKDIQ 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG V+ LAIYDTMQ +K V T CVG A +A LLA G KG R A+P S +
Sbjct: 62 MYINSPGGSVSAGLAIYDTMQHIKPDVSTMCVGMAASMAAVLLAAGAKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G ARGQA DI A +L+ R+ + + L+ +TGQP E++ +D R ++EA
Sbjct: 122 IHQPLGGARGQASDIEIHARHILKTRERLNRILAERTGQPLERVAQDTDRDNFMSAEEAK 181
Query: 252 EYGLIDRII 260
YGLID +I
Sbjct: 182 AYGLIDEVI 190
>gi|75755684|ref|YP_319788.1| ATP-dependent Clp protease proteolytic subunit [Acorus calamus]
gi|161622334|ref|YP_001586206.1| ATP-dependent Clp protease proteolytic subunit [Acorus americanus]
gi|122217404|sp|Q3V509.1|CLPP_ACOCL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|74381734|emb|CAI53819.1| ATP-dependent protease proteolytic subunit [Acorus calamus]
gi|160369877|gb|ABX38768.1| clp protease proteolytic subunit [Acorus americanus]
Length = 202
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDIYNRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++IN PGG V P + +YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFLS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|126659496|ref|ZP_01730629.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
gi|126619230|gb|EAZ89966.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp.
CCY0110]
Length = 201
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 117/179 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V LAIY
Sbjct: 14 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQIYINSPGGSVYAGLAIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I
Sbjct: 74 DTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 133
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E+L ++ + L+ TGQP++KI D R +QEA++YGLID++I P + +
Sbjct: 134 QAKEILYIKKRLNDMLAEHTGQPYDKIATDTERDFFMSAQEAVDYGLIDKVISRPDLSD 192
>gi|46198558|ref|YP_004225.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus HB27]
gi|46196180|gb|AAS80598.1| ATP-dependent clp protease proteolytic subunit [Thermus
thermophilus HB27]
Length = 212
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 129/198 (65%), Gaps = 7/198 (3%)
Query: 64 RIAMMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLD 122
RI M+ P V+ +T GE + D+++ L ++R+IF+G ID + +N ++A +L+LD
Sbjct: 16 RIGMV---IPYVIEQTARGERVY---DIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLD 69
Query: 123 SVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNR 182
+ + ++ + +YIN PGG+V LAIYDTMQ +++PV T +G A +A +LA GEKG R
Sbjct: 70 AQNPNQEIKLYINSPGGEVDAGLAIYDTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRR 129
Query: 183 SAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRI 242
A+P +++ + P G RG A DI +A E+L+ + + + L++ TGQP EK+ KD R
Sbjct: 130 YALPHAKVMIHQPWGGVRGTASDIAIQAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRD 189
Query: 243 KRFGSQEALEYGLIDRII 260
+QEALEYGLID+++
Sbjct: 190 YYLSAQEALEYGLIDQVV 207
>gi|374411886|gb|AEZ48927.1| clp protease proteolytic subunit, partial [Lilium superbum]
Length = 198
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 121/194 (62%), Gaps = 2/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD-LWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+G PKV +R PGE WVD L N L+RER++F+GQ +D E SNQ++ M+YL D+
Sbjct: 1 MPVGVPKVPFRNPGEEDAVWVDVLINRLHRERLLFLGQEVDSEISNQLVGLMVYLSIEDN 60
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
++ Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 TRDFYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFP 120
Query: 187 LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 HARVMIHQPASSFYEAQAGEFILEAEELLKLRENLTKVYVQRTGNPLWVISEDMERDVFM 180
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 SATEAQAHGIVDLV 194
>gi|217075244|gb|ACJ85982.1| unknown [Medicago truncatula]
gi|388496734|gb|AFK36433.1| unknown [Medicago truncatula]
Length = 195
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV ++ P E WVDL+N L++ER++F+GQ ++ E SNQ++ M+YL S D +
Sbjct: 1 MPIGVPKVPFQLPEEDEASWVDLYNRLFQERLLFLGQEVNTEISNQLVGLMVYLSSEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG+V +AI+D MQ +++ V T CVG A + LL GGE R A P
Sbjct: 61 RDLYLFINSPGGEVISGMAIFDIMQVVEAEVHTVCVGLAASMGSLLLVGGEFTKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQ + EA+ELL++R I +++TG+ +I +D+ R
Sbjct: 121 ARVMIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG++D +
Sbjct: 181 AEEAEAYGIVDTV 193
>gi|333977877|ref|YP_004515822.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
gi|333821358|gb|AEG14021.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 197
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 87/200 (43%), Positives = 127/200 (63%), Gaps = 6/200 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M P V+ +T GE ++ D+++ L ++R+IFIG ID+ +N ++A ML+L++ D
Sbjct: 1 MSTLVPIVVEQTNRGERAY---DIYSRLLKDRIIFIGGPIDDHVANLVIAQMLFLEAEDP 57
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K ++ YIN PGG VT LAIYDTMQ +K V T C+G A + FLLA G KG R A+P
Sbjct: 58 EKDIHFYINSPGGVVTAGLAIYDTMQYIKPDVSTICLGQAASMGSFLLAAGAKGKRYALP 117
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L P G +GQA +I A E+LR++D + + L++ TGQP EKI +D R
Sbjct: 118 YARIMLHQPLGGVQGQATEIEIHAREILRIKDILNELLAKHTGQPREKIARDTDRDFFMS 177
Query: 247 SQEALEYGLIDRII--RPPR 264
++EA EYG+ID ++ R P+
Sbjct: 178 AEEAKEYGIIDEVLTYRKPK 197
>gi|283797647|ref|ZP_06346800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
sp. M62/1]
gi|291074652|gb|EFE12016.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium sp. M62/1]
gi|295092868|emb|CBK78975.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cf. saccharolyticum K10]
gi|295114657|emb|CBL35504.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[butyrate-producing bacterium SM4/1]
Length = 193
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ T GE S+ D+++ L +ER++F+G+ + + ++ I+A +L+L+S D +K +
Sbjct: 4 VPYVIESTSRGERSY---DIFSRLLKERIVFLGEEVTDVSASLIVAQLLFLESEDPNKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTM +K V T CVG A + FLLAGG KG R A+P + +
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMNYIKCDVSTICVGMAASMGAFLLAGGAKGKRLALPNAEV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G ARGQA +I+ A+ +LR + + + L+ TGQP+E I +D R ++EA
Sbjct: 121 MIHQPSGGARGQATEIQIVAENILRTKKKLNEILAANTGQPYEVIERDTDRDNYMTAEEA 180
Query: 251 LEYGLIDRII 260
L+YGLIDR+I
Sbjct: 181 LKYGLIDRVI 190
>gi|428770773|ref|YP_007162563.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
gi|428685052|gb|AFZ54519.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
aponinum PCC 10605]
Length = 196
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 123/196 (62%), Gaps = 2/196 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER+IF+GQ + +E +N ++A +L L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGDRAF-DIYSRLLRERIIFLGQQVTDELANSLVAQLLLLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM +K V T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIKPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + ++ TGQP +KI +D R ++EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKKQLNHYMASHTGQPLDKIEEDTERDFFMSAEEARD 180
Query: 253 YGLIDRIIRPPRIKED 268
YGLIDR++ +IK +
Sbjct: 181 YGLIDRVVIRSQIKSN 196
>gi|325210985|ref|YP_004286029.1| clp protease proteolytic subunit [Gossypium thurberi]
gi|290775847|gb|ADD62343.1| clp protease proteolytic subunit [Gossypium thurberi]
gi|326457064|gb|ADZ74328.1| clp protease proteolytic subunit [Gossypium anomalum]
gi|326457152|gb|ADZ74415.1| clp protease proteolytic subunit [Gossypium bickii]
gi|326457240|gb|ADZ74502.1| clp protease proteolytic subunit [Gossypium herbaceum]
gi|326457361|gb|ADZ74622.1| clp protease proteolytic subunit [Gossypium longicalyx]
gi|326457413|gb|ADZ74673.1| clp protease proteolytic subunit [Gossypium stocksii]
gi|326457501|gb|ADZ74760.1| clp protease proteolytic subunit [Gossypium sturtianum]
Length = 196
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 124/194 (63%), Gaps = 3/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRNPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSIENDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLLAGGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVHTICMGLAASMGSFLLAGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+ R+ + PA + Q + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARRVMIHQPASSFYEAQTGEFILEAEELLKLRESLTRVYVQRTGKPLWVVSEDMERDVFM 179
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 SATEAQAHGIVDLV 193
>gi|87123284|ref|ZP_01079135.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
gi|86169004|gb|EAQ70260.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. RS9917]
Length = 199
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER+IF+G ID++ ++ ++A +L+L++ D K + +
Sbjct: 2 PTVVEQS-GRGERSF-DIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKEIQI 59
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R A+P +RI +
Sbjct: 60 YINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPSARIMI 119
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++D + ++ TGQP EKI +D R EA+E
Sbjct: 120 HQPLGGAQGQAVDIEIQAQEILFLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVE 179
Query: 253 YGLIDRII 260
YGLIDR++
Sbjct: 180 YGLIDRVV 187
>gi|452851006|ref|YP_007492690.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
gi|451894660|emb|CCH47539.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
piezophilus]
Length = 203
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 123/205 (60%), Gaps = 10/205 (4%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+ P V+ T G + D+++ L ++R+I +G ID+ ++ I A +L+L+S D K
Sbjct: 2 VAIPMVI-ETTGRTERAY-DIYSRLLKDRIILLGSAIDDHVASLICAQLLFLESEDPEKE 59
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+YMYIN PGG V+ +AIYDTMQ + +PV T C+G A + LL GE G R A+P SR
Sbjct: 60 IYMYINSPGGSVSSGMAIYDTMQYISAPVATLCLGQAASMGALLLGAGEAGMRYALPHSR 119
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P G A+GQA DI A E+LR+RD + + ++ TGQ EKI +D R S+E
Sbjct: 120 IMIHQPLGGAQGQASDIHIHAKEILRLRDELNEIMAGHTGQKLEKIREDTERDYFMSSKE 179
Query: 250 ALEYGLIDRIIRPPRIKEDMPRKDA 274
A EYGLID+++ RKDA
Sbjct: 180 AQEYGLIDKVMS--------SRKDA 196
>gi|427418142|ref|ZP_18908325.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760855|gb|EKV01708.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 201
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/188 (43%), Positives = 119/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ + E SN I+A ML+L++ D + +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIVFLGQQVTAESSNLIVAQMLFLEAEDPERDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V L I+DTM +K V T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVYDGLGIFDTMNHIKPDVSTICVGLAASMGAFLLSAGTKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + L+ TGQP E+IT+D R EA+E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYIKKTLNDALAAHTGQPIERITEDTERDFFMSPSEAVE 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|375084538|ref|ZP_09731403.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
gi|374568042|gb|EHR39235.1| ATP-dependent Clp protease proteolytic subunit [Megamonas
funiformis YIT 11815]
Length = 198
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 126/193 (65%), Gaps = 2/193 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ ++ G G + D+++ L ++R+IF+G ID+ +N ++A +L+L+S D K ++
Sbjct: 4 VPMVVEQS-GRGERAY-DIYSRLLKDRIIFLGGPIDDNVANVVIAQLLFLESEDPDKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTMQ +K V T C+G A + LLA G KG R A+P SRI
Sbjct: 62 LYINSPGGVVTAGLAIYDTMQYIKPDVSTICIGQAASMGSVLLAAGAKGKRYALPYSRIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQ+ DI+ +A E+LR+R+ + + LSR TGQ +K+T+D R + EA
Sbjct: 122 IHQPLGGAQGQSTDIQIQAREILRIRETLNEILSRHTGQSVKKLTEDTERDNFMSALEAK 181
Query: 252 EYGLIDRIIRPPR 264
+YGLID +I P+
Sbjct: 182 KYGLIDEVIIRPQ 194
>gi|114567171|ref|YP_754325.1| ATP-dependent Clp protease proteolytic subunit [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|122317850|sp|Q0AWF0.1|CLPP_SYNWW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|114338106|gb|ABI68954.1| ATP-dependent Clp protease proteolytic subunit ClpP [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
Length = 200
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 124/194 (63%), Gaps = 4/194 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G ID+ +N ++A +L+L++ D K +
Sbjct: 5 VPMVVEQTNRGERSY---DIYSRLLKDRIIFLGSGIDDTVANLVIAQLLFLEAEDPDKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG +T +AIYDT+Q ++ V T CVG A + FLLA G+KG R A+P + I
Sbjct: 62 SLYINSPGGSITAGMAIYDTLQYIRPDVSTICVGLAASMGAFLLAAGKKGKRYALPNAEI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ PAG +GQA DI A ++ +++ + K L+ +TGQP E+I KD R +QEA
Sbjct: 122 MIHQPAGGTQGQATDIEIHARRIMNMKESLNKILAERTGQPLERIQKDTDRDYFMTAQEA 181
Query: 251 LEYGLIDRIIRPPR 264
EYG+ID +I P+
Sbjct: 182 KEYGIIDEVISHPK 195
>gi|304437034|ref|ZP_07396997.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
gi|304369985|gb|EFM23647.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
oral taxon 149 str. 67H29BP]
Length = 203
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 120/190 (63%), Gaps = 1/190 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L +ER+IF+G ID+ +N I+A ML+L+S D K +++YI
Sbjct: 7 MVVETSGRGERAY-DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYI 65
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT LAIYDTMQ +K V T CVG A + LL G KG R A+P +RI +
Sbjct: 66 NSPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQ 125
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQ+ DI+ +A E+LR+R+ + L+ TGQ EKI D R ++EA EYG
Sbjct: 126 PLGGAQGQSTDIQIQAKEILRLREVGNEILAHHTGQDTEKINVDTERDNFMSAEEAKEYG 185
Query: 255 LIDRIIRPPR 264
LID ++ P+
Sbjct: 186 LIDEVVLRPK 195
>gi|29565593|ref|NP_817171.1| ATP-dependent Clp protease proteolytic subunit [Pinus koraiensis]
gi|237688459|ref|YP_002905078.1| ATP-dependent Clp protease proteolytic subunit [Picea sitchensis]
gi|237688591|ref|YP_002905208.1| ATP-dependent Clp protease proteolytic subunit [Pinus gerardiana]
gi|237688659|ref|YP_002905275.1| ATP-dependent Clp protease proteolytic subunit [Pinus krempfii]
gi|324986358|ref|YP_004276230.1| ATP-dependent Clp protease proteolytic subunit [Pinus lambertiana]
gi|68052195|sp|Q85X43.1|CLPP_PINKO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|29469692|gb|AAO74020.1| ATP-dependent protease subunit [Pinus koraiensis]
gi|226875288|gb|ACO89027.1| ATP-dependent Clp protease proteolytic subunit [Picea sitchensis]
gi|226876052|gb|ACO89308.1| ATP-dependent Clp protease proteolytic subunit [Pinus gerardiana]
gi|226951117|gb|ACO94180.1| ATP-dependent Clp protease proteolytic subunit [Pinus krempfii]
gi|228016125|gb|ACP50962.1| ATP-dependent Clp protease proteolytic subunit [Pinus sibirica]
gi|228016182|gb|ACP51018.1| ATP-dependent Clp protease proteolytic subunit [Pinus squamata]
gi|228016247|gb|ACP51082.1| ATP-dependent Clp protease proteolytic subunit [Pinus strobus]
gi|228016623|gb|ACP51452.1| ATP-dependent Clp protease proteolytic subunit [Pinus albicaulis]
gi|228016756|gb|ACP51583.1| ATP-dependent Clp protease proteolytic subunit [Pinus armandii]
gi|228016879|gb|ACP51704.1| ATP-dependent Clp protease proteolytic subunit [Pinus ayacahuite]
gi|228017126|gb|ACP51947.1| ATP-dependent Clp protease proteolytic subunit [Pinus cembra]
gi|228017247|gb|ACP52066.1| ATP-dependent Clp protease proteolytic subunit [Pinus flexilis]
gi|228017313|gb|ACP52131.1| ATP-dependent Clp protease proteolytic subunit [Pinus lambertiana]
gi|228017506|gb|ACP52321.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|228017569|gb|ACP52383.1| ATP-dependent Clp protease proteolytic subunit [Pinus parviflora
var. pentaphylla]
gi|228017633|gb|ACP52446.1| ATP-dependent Clp protease proteolytic subunit [Pinus peuce]
gi|257042530|gb|ACV32804.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042558|gb|ACV32831.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042587|gb|ACV32859.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042617|gb|ACV32888.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042645|gb|ACV32915.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042673|gb|ACV32942.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042702|gb|ACV32970.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042730|gb|ACV32997.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042757|gb|ACV33023.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|257042785|gb|ACV33050.1| ATP-dependent Clp protease proteolytic subunit [Pinus monticola]
gi|323514207|gb|ADX89754.1| ATP-dependent Clp protease proteolytic subunit [Pinus lambertiana]
gi|356996600|gb|AET44517.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
chiapensis]
gi|356996819|gb|AET44733.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
bungeana]
gi|356997036|gb|AET44947.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
amamiana]
gi|356997251|gb|AET45159.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
kwangtungensis]
gi|356997323|gb|AET45230.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
wallichiana]
gi|356997686|gb|AET45588.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
strobiformis]
gi|356998341|gb|AET46234.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
pumila]
gi|356999357|gb|AET47236.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
morrisonicola]
gi|357001474|gb|AET49324.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
dalatensis]
gi|357001546|gb|AET49395.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pinus
fenzeliana var. dabeshanensis]
Length = 196
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A + NEA + +R+YI K +T P E I +DL R
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEAKHITMLRNYITKCYIERTDNPEEVIQRDLDRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEARAYGIVDTV 193
>gi|242279532|ref|YP_002991661.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
salexigens DSM 2638]
gi|242122426|gb|ACS80122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
salexigens DSM 2638]
Length = 202
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
GT ++ T G + D+++ L ++R+I + +++ ++ I A +L+L+S D K +
Sbjct: 3 GTIPIVVETTGRTERAY-DIYSRLLKDRIILLSGEVNDHVASVICAQLLFLESEDPEKEI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT +AIYDTMQ + +PV T C+G A + FLL+ GEKG R ++P SRI
Sbjct: 62 YMYINSPGGVVTAGMAIYDTMQYISAPVATLCMGQAASMGAFLLSAGEKGQRYSLPHSRI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA DI +A E+LR+R + ++ TG+ E+I KD R +QEA
Sbjct: 122 LIHQPLGGAQGQATDIDIQAREILRLRKSLNSIMAENTGRTVEEIEKDTDRDNFMSAQEA 181
Query: 251 LEYGLIDRIIR 261
+EYGLID+++
Sbjct: 182 VEYGLIDKVLE 192
>gi|288818082|ref|YP_003432430.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|384128847|ref|YP_005511460.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
gi|288787482|dbj|BAI69229.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenobacter
thermophilus TK-6]
gi|308751684|gb|ADO45167.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Hydrogenobacter thermophilus TK-6]
Length = 199
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L ++R++ +G ID+ +N I+A +L+L++ D K +
Sbjct: 9 VPIVIEQTPRGERAY---DIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT +AIYDTMQ +K V T C+G A + LLA G G R A+P SRI
Sbjct: 66 YMYINSPGGSVTAGMAIYDTMQYIKPDVVTICIGQAASMGAVLLAAGAPGKRYALPHSRI 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G GQA DI A+E+ R++ + + LS+ TGQP E+I +D+ R S+EA
Sbjct: 126 MIHQPLGGITGQATDIIIHAEEIKRIKHMLNEILSKHTGQPLERIERDVERDYFMSSEEA 185
Query: 251 LEYGLIDRII 260
EYG++DR+I
Sbjct: 186 REYGIVDRVI 195
>gi|225544148|ref|YP_002720137.1| clpP [Jatropha curcas]
gi|224979589|gb|ACN72716.1| clpP [Jatropha curcas]
Length = 195
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D E SNQ++ M+YL ++
Sbjct: 1 MPIGVPKVPFRNPGEDDSIWIDV-NRLYRERLLFLGQDVDSEISNQLIGLMVYLSIESET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 119
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P AG Q + EA+ELL++R+ + + +++TG+P +++D+ R
Sbjct: 120 ARVMIHQPIAGFYEAQIVEFVLEAEELLKLREILTRIYAQRTGKPLWIVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|254432163|ref|ZP_05045866.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
gi|197626616|gb|EDY39175.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium sp.
PCC 7001]
Length = 196
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 119/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+G+ + E +N+I+A +L+L++ D K +++YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIVFLGEPVTAESANRIVAQLLFLEAEDPEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVQTVCVGLAASMGAFLLCAGTKGKRSSLTHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L ++ + +EL+ +TGQP +I +D R EA+ YG
Sbjct: 123 PLGGARGQASDIRIQADEILYLKQKLNQELADRTGQPMTRIEEDTDRDFFMSPAEAMAYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDKVI 188
>gi|257455804|ref|ZP_05621030.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enhydrobacter
aerosaccus SK60]
gi|257446818|gb|EEV21835.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Enhydrobacter
aerosaccus SK60]
Length = 224
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE S+ D+++ L RERV+F+ +++ +N I+A +L+L++ + K +
Sbjct: 31 VPMVVEQSARGERSF---DIYSRLLRERVVFLAGQVEDHMANLIVAQLLFLEAENPEKDI 87
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LA++DTM ++ V T C+G AY + FLLA GEKG R A+ +R+
Sbjct: 88 HLYINSPGGSVSAGLAVFDTMNFIQPQVSTICMGGAYSMGSFLLAAGEKGKRYALANARV 147
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI A E+L++R+ + K L+ +TGQP EKI +D+ R +QEA
Sbjct: 148 MIHQPSGGAQGQATDIEINAREILKIRERLNKILAERTGQPLEKIARDVERDYWLDAQEA 207
Query: 251 LEYGLIDRII 260
EYGLID ++
Sbjct: 208 KEYGLIDEVL 217
>gi|298491710|ref|YP_003721887.1| endopeptidase Clp ['Nostoc azollae' 0708]
gi|298233628|gb|ADI64764.1| Endopeptidase Clp ['Nostoc azollae' 0708]
Length = 220
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 121/209 (57%), Gaps = 15/209 (7%)
Query: 68 MPIGTP-KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ + +V Y PG WQW+ + + +ER++F+ Q + +N +++++LYLDS D
Sbjct: 1 MPVDSALRVPYNIPGSNQWQWISIGQRMTQERILFLNQPLTTSLANSLISSILYLDSEDQ 60
Query: 127 SKRVYMYINGPGG--------------DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGF 172
SK +Y+YIN G + LAIYDTMQ +KS V T C G A +A
Sbjct: 61 SKPIYLYINSLGDPVLAGRIDETAGMMSIKSCLAIYDTMQYIKSEVVTICFGQAVGMAAL 120
Query: 173 LLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 232
+L+ G KG R ++P + IAL AA+GQA DI+ A+E+LR R I S+ TGQP
Sbjct: 121 ILSSGAKGKRVSLPHASIALTQFQVAAQGQATDIQVNAEEVLRKRAIILDIFSQNTGQPA 180
Query: 233 EKITKDLSRIKRFGSQEALEYGLIDRIIR 261
+KITKD RI EA EYGLIDR++
Sbjct: 181 DKITKDSERIFYMTPLEAKEYGLIDRVLE 209
>gi|398347022|ref|ZP_10531725.1| ATP-dependent Clp protease proteolytic subunit [Leptospira broomii
str. 5399]
Length = 198
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/192 (42%), Positives = 125/192 (65%), Gaps = 2/192 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IF+G I +E++N ++A +L+LD+ + + +Y+
Sbjct: 5 PVVIEQT-GRGERSY-DIYSRLLKDRIIFLGNAISDEYANVVIAQLLFLDAENPDRDIYL 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ LAIYDTMQ +K+ V T CVG A +A LLAGG KG RSA+P SRI +
Sbjct: 63 YINSPGGYVSSGLAIYDTMQYIKADVRTLCVGQASSMAALLLAGGAKGKRSALPHSRIMM 122
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A GQA DI +A E+L++++ + ++ TG+ E+I KD R ++EA
Sbjct: 123 HQPTGGATGQASDIAIQAKEVLKLKEVLNGLYTKHTGKSMEQIQKDTERDLYMTAEEAQT 182
Query: 253 YGLIDRIIRPPR 264
YG+ID +I R
Sbjct: 183 YGIIDSVISIER 194
>gi|218247705|ref|YP_002373076.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|257060958|ref|YP_003138846.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
gi|218168183|gb|ACK66920.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8801]
gi|256591124|gb|ACV02011.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 8802]
Length = 229
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 115/179 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V LAIY
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL GG G R A+P SRI + P G A+GQA +I
Sbjct: 102 DTMQQIRPDVATICFGLAASMGAFLLCGGAPGKRMALPSSRIMIHQPLGGAQGQAVEIEI 161
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E+L ++ + + L+ TGQPF+ I +D R +QEA EYGLID++I P + +
Sbjct: 162 QAKEILYIKRRLNEMLASHTGQPFDTIAEDTERDFFMSAQEAKEYGLIDKVISRPHLSD 220
>gi|209527271|ref|ZP_03275782.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|376003778|ref|ZP_09781581.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423066152|ref|ZP_17054942.1| putative ATP-dependent Clp protease proteolytic subunit
[Arthrospira platensis C1]
gi|209492338|gb|EDZ92682.1| Endopeptidase Clp [Arthrospira maxima CS-328]
gi|375327809|emb|CCE17334.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406712194|gb|EKD07383.1| putative ATP-dependent Clp protease proteolytic subunit
[Arthrospira platensis C1]
Length = 214
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/206 (39%), Positives = 121/206 (58%), Gaps = 14/206 (6%)
Query: 74 KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMY 133
+V Y+ PG WQWV+++ L +ER+IF+ Q + +N +++ MLYLDS D +K +YMY
Sbjct: 8 RVPYQIPGSQYWQWVNIYTRLSQERIIFLNQPLTTGVANSLVSAMLYLDSDDQNKPIYMY 67
Query: 134 INGPGG--------------DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
IN G V LA+YDTMQ +KS + T C+G A +A LL+ G K
Sbjct: 68 INSIGDPVLAGMANESMGMMSVMAALAVYDTMQHIKSEIVTICLGQAVGMAALLLSCGSK 127
Query: 180 GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDL 239
G R+++P S I L +P +GQA DI+ ADE+L R + + TGQ EK+TKD+
Sbjct: 128 GKRASLPNSMITLYNPQTGTQGQATDIQVTADEILSKRALMMDIFHQNTGQTIEKLTKDM 187
Query: 240 SRIKRFGSQEALEYGLIDRIIRPPRI 265
+R +EA EYG+IDR++ ++
Sbjct: 188 NRTFYMTPEEAKEYGIIDRVLTTLKL 213
>gi|254361750|ref|ZP_04977885.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452745422|ref|ZP_21945257.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
gi|153093285|gb|EDN74281.1| S14 family endopeptidase ClpP [Mannheimia haemolytica PHL213]
gi|452086571|gb|EME02959.1| ATP-dependent Clp protease proteolytic subunit [Mannheimia
haemolytica serotype 6 str. H23]
Length = 197
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +
Sbjct: 4 VPMVVEQTSKGERSY---DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+ G KG R A+P +RI
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G ARGQA DI+ +A+E+LR++ + + ++ +GQ +EK+ D R ++EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAEEILRLKATLTRRMAEHSGQSYEKVLADTERDNFMSAEEA 180
Query: 251 LEYGLIDRII 260
EYGLID+++
Sbjct: 181 AEYGLIDKVL 190
>gi|456063263|ref|YP_007502233.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium CB]
gi|455440560|gb|AGG33498.1| ATP-dependent Clp protease, proteolytic subunit ClpP [beta
proteobacterium CB]
Length = 209
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L RERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 16 LGLVPMVIETSGRGERAY-DIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLESENPDKE 74
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL GEKG R A+P SR
Sbjct: 75 ISLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKRYALPNSR 134
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
+ + P G ARGQA DI +A E+L +R+ + K L+ +TGQ E I KD R + +
Sbjct: 135 VMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIETIAKDTDRDNFMSADQ 194
Query: 250 ALEYGLIDRII 260
A EYGLID++I
Sbjct: 195 AQEYGLIDKVI 205
>gi|55980584|ref|YP_143881.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus HB8]
gi|381190341|ref|ZP_09897864.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp. RL]
gi|384430811|ref|YP_005640171.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus SG0.5JP17-16]
gi|386360877|ref|YP_006059122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus JL-18]
gi|60389682|sp|Q72L15.2|CLPP_THET2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460210|sp|Q5SKM8.1|CLPP_THET8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|55771997|dbj|BAD70438.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus HB8]
gi|333966279|gb|AEG33044.1| ATP-dependent Clp protease proteolytic subunit [Thermus
thermophilus SG0.5JP17-16]
gi|380451934|gb|EIA39535.1| ATP-dependent Clp protease proteolytic subunit [Thermus sp. RL]
gi|383509904|gb|AFH39336.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
thermophilus JL-18]
Length = 194
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 117/172 (68%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N ++A +L+LD+ + ++ + +YIN PGG+V LAIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANVVVAQLLFLDAQNPNQEIKLYINSPGGEVDAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +++PV T +G A +A +LA GEKG R A+P +++ + P G RG A DI
Sbjct: 78 DTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGVRGTASDIAI 137
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L+ + + + L++ TGQP EK+ KD R +QEALEYGLID+++
Sbjct: 138 QAQEILKAKKLLNEILAKHTGQPLEKVEKDTDRDYYLSAQEALEYGLIDQVV 189
>gi|406981668|gb|EKE03092.1| hypothetical protein ACD_20C00261G0002 [uncultured bacterium]
Length = 203
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/180 (45%), Positives = 118/180 (65%), Gaps = 3/180 (1%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L RER+IF+G +D+ +N I+A +L LDS + K + +YIN PGG
Sbjct: 14 GERSF---DIFSRLLRERIIFLGTPVDDMVANLIVAQLLLLDSENPEKDIMLYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT LAIYDTMQ +++ V T C+G A + FLLA G G R A+P SR+ + P G A+
Sbjct: 71 VTAGLAIYDTMQHIRADVNTICLGQAASMGAFLLAAGTPGKRMALPHSRVLIHQPLGGAQ 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
GQA DI +A E+ R++ + + L++ TGQ F+KI KD R QEALEYG++D++I
Sbjct: 131 GQATDIEIQAAEIGRIKRTLNELLAKHTGQSFKKIEKDTDRDYIMTPQEALEYGMVDKVI 190
>gi|294101895|ref|YP_003553753.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
gi|293616875|gb|ADE57029.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aminobacterium colombiense DSM 12261]
Length = 193
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/188 (43%), Positives = 122/188 (64%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L ++R+IF+GQ ID+ +N ++A +L+L+S D K +++
Sbjct: 4 PMVIEQS-GRGERAY-DIYSRLLKDRIIFLGQEIDDPIANTVVAQLLFLESEDPDKDIHL 61
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG ++ LAIYDTMQ +KSPV T C+G A +A LLAGG G R A+P +R+ +
Sbjct: 62 YINSPGGVISSGLAIYDTMQYIKSPVSTICIGQAASMAAVLLAGGAPGKRIALPNARVMI 121
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A GQA DI A E+L++R+ I L + TGQ ++I D R + EALE
Sbjct: 122 HQPLGGAHGQATDIEIHAKEILKIREKINDILVKHTGQTRKRIKADTDRDFYMSAAEALE 181
Query: 253 YGLIDRII 260
Y +ID++I
Sbjct: 182 YSIIDKVI 189
>gi|333370325|ref|ZP_08462336.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332978057|gb|EGK14795.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 201
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ DL++ L ++R+IFIG ID+ +N ++A ML+L + D K +
Sbjct: 12 VPMVVEQTSRGERAY---DLYSRLLKDRIIFIGSPIDDSVANSVMAQMLFLAADDPDKEI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG +T +AIYDTMQ +K V T CVG A + FLLA G KG R A+P S +
Sbjct: 69 SLYINSPGGSITAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGTKGKRYALPNSEV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G RGQA DI+ A+ +L+ R I++ L+ +TGQP KI +D R +QEA
Sbjct: 129 MIHQPLGGVRGQAADIQIHAEWILKTRKRIYEILAGRTGQPLSKIERDSDRDFFMDAQEA 188
Query: 251 LEYGLIDRII 260
EYGL+D+++
Sbjct: 189 KEYGLVDQVM 198
>gi|307250531|ref|ZP_07532475.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
gi|306857424|gb|EFM89536.1| ATP-dependent Clp protease proteolytic subunit [Actinobacillus
pleuropneumoniae serovar 4 str. M62]
Length = 172
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 112/165 (67%)
Query: 96 RERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLK 155
+ER+IF+ +++ +N I+A ML+L++ D K +Y+YIN PGG VT LAIYDTM +K
Sbjct: 2 KERIIFLTGQVEDHMANLIVAQMLFLEAEDPEKDIYLYINSPGGVVTAGLAIYDTMNFIK 61
Query: 156 SPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLR 215
V T C G A + FLL+GG KG R A+P +R+ + P G ARGQA DI+ +A E+L+
Sbjct: 62 PDVATLCTGQACSMGAFLLSGGAKGKRFALPNARVMIHQPLGGARGQATDIQIQAQEILK 121
Query: 216 VRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+++ + ++++ +GQPFEK+ D R + EA+EYGLID+++
Sbjct: 122 LKEMLTRKMAEHSGQPFEKVAADTERDNFMSAVEAMEYGLIDKVL 166
>gi|16332068|ref|NP_442796.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451816220|ref|YP_007452672.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|2493737|sp|Q59993.1|CLPP2_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|1001377|dbj|BAA10867.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|407960292|dbj|BAM53532.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|451782189|gb|AGF53158.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
Length = 226
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/179 (44%), Positives = 116/179 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V LAIY
Sbjct: 39 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 98
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I
Sbjct: 99 DTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 158
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E+L ++D + L TGQP EK+ +D R ++EA EYGLID++I P + +
Sbjct: 159 QAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPNLPD 217
>gi|296330330|ref|ZP_06872811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305676065|ref|YP_003867737.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|398304937|ref|ZP_10508523.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
vallismortis DV1-F-3]
gi|443630850|ref|ZP_21115031.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
gi|296152598|gb|EFG93466.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii ATCC 6633]
gi|305414309|gb|ADM39428.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. spizizenii str. W23]
gi|443348655|gb|ELS62711.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. inaquosorum KCTC 13429]
Length = 198
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EAL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAL 181
Query: 252 EYGLIDRII 260
EYGLID+I+
Sbjct: 182 EYGLIDKIL 190
>gi|116074798|ref|ZP_01472059.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
gi|116068020|gb|EAU73773.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
RS9916]
Length = 196
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+G+ + E +N+I+A +L+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIVFLGEPVTSESANRIVAQLLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G KG RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLRHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A GQA DIR +ADE+L ++D + +EL+ ++GQP EK+ D R EA+ YG
Sbjct: 123 PLGGASGQASDIRIQADEILFLKDKLNRELAERSGQPLEKMQVDTDRDFFMSPDEAVTYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDTVI 188
>gi|156598137|gb|ABU85333.1| clp protease proteolytic subunit [Elaeis oleifera]
Length = 195
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RE ++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGIPKVPFRSPGEEDAIWVDV-NRLHREGLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A+P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQVHGIVDLV 192
>gi|428773238|ref|YP_007165026.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
gi|428687517|gb|AFZ47377.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanobacterium
stanieri PCC 7202]
Length = 195
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 122/194 (62%), Gaps = 3/194 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T G G + D+++ L RER++F+GQ + +E +N ++A +L L++ D K +Y
Sbjct: 2 VPTVI-ETSGRGERAF-DIYSRLLRERIVFLGQQVTDELANSLVAQLLLLEAEDPEKDIY 59
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ L I+DTM ++ V T CVG A + FLL+ G KG R ++P SRI
Sbjct: 60 LYINSPGGSVSAGLGIFDTMNQIQPDVCTICVGLAASMGAFLLSAGAKGKRMSLPNSRIM 119
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI +A E+L ++ + ++ TGQP EKI +D R ++EA+
Sbjct: 120 IHQPLGGAQGQATDIEIQAKEILYLKKQLNHYMASHTGQPLEKIEEDTERDFFMSAEEAV 179
Query: 252 EYGLIDRII-RPPR 264
YGLIDR++ R P+
Sbjct: 180 NYGLIDRVVTRVPK 193
>gi|409990519|ref|ZP_11273882.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
gi|291569211|dbj|BAI91483.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
gi|409938616|gb|EKN79917.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis str. Paraca]
Length = 213
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 121/201 (60%), Gaps = 14/201 (6%)
Query: 74 KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMY 133
+V Y+ PG WQWV+++ L +ER+IF+ Q + +N ++++MLYLDS D +K +YMY
Sbjct: 8 RVPYQIPGSQYWQWVNIYTRLSQERIIFLNQPLTTGVANSLVSSMLYLDSDDHNKPIYMY 67
Query: 134 INGPGG--------------DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
IN G V LA+YDTMQ +KS + T C+G A +A LL+ G K
Sbjct: 68 INSIGDPVLAGMANESMGMMSVMAALAVYDTMQHIKSEIVTICLGQAVGMAALLLSCGSK 127
Query: 180 GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDL 239
G R+++P S I L +P +GQA DI+ A+E+L R + + TGQP EK+TKD+
Sbjct: 128 GKRASLPNSMITLYNPQTGTQGQATDIQVTAEEILSKRVLMMDIFHQNTGQPVEKLTKDM 187
Query: 240 SRIKRFGSQEALEYGLIDRII 260
+R ++A EYG+IDR++
Sbjct: 188 NRTFYMTPEQAKEYGIIDRVL 208
>gi|440682480|ref|YP_007157275.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
gi|428679599|gb|AFZ58365.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
cylindrica PCC 7122]
Length = 201
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 115/186 (61%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDSSLANLIVAQLLFLDSEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + L+ TGQP E+I +D R +EA EYG
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAQEYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|290489452|gb|ADD31110.1| clp protease proteolytic subunit protein [Ximenia americana]
Length = 198
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 121/195 (62%), Gaps = 3/195 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV R PGE WVD++N LYRER +F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPSRIPGEEYATWVDIYNQLYRERFLFLGQAVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDT+Q ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTIQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRI--ALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+RI + PA + Q + EA+ELL++R+ + ++TG+P +++D+ R
Sbjct: 121 ARIRVMIHQPASSYFEAQTGEFILEAEELLKLRETLTGVYGQRTGKPLWVVSEDMERDVF 180
Query: 245 FGSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 MSATEAQAHGIVDLV 195
>gi|383323811|ref|YP_005384665.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|383326980|ref|YP_005387834.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
gi|383492864|ref|YP_005410541.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|384438132|ref|YP_005652857.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|339275165|dbj|BAK51652.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803]
gi|359273131|dbj|BAL30650.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. GT-I]
gi|359276301|dbj|BAL33819.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-N]
gi|359279471|dbj|BAL36988.1| ATP-dependent Clp protease proteolytic subunit [Synechocystis sp.
PCC 6803 substr. PCC-P]
Length = 201
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 115/177 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V LAIY
Sbjct: 14 DIYSRLLRERIIFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I
Sbjct: 74 DTMQQIRPDVVTICFGLAASMGAFLLSGGCKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 133
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 265
+A E+L ++D + L TGQP EK+ +D R ++EA EYGLID++I P +
Sbjct: 134 QAREILYIKDRLNTMLVEHTGQPMEKLQEDTERDFFMSAEEAKEYGLIDQVISRPNL 190
>gi|414079240|ref|YP_007000664.1| peptidase family S14 ClpP [Anabaena sp. 90]
gi|413972519|gb|AFW96607.1| peptidase family S14 ClpP [Anabaena sp. 90]
Length = 201
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ +D +N I+A +L+LDS D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGEQVDSNLANLIVAQLLFLDSEDAEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + + L+ TGQPFE+I++D R EA EYG
Sbjct: 123 PLGGAQGQATDIAIQAREILYHKQRLNEFLADHTGQPFERISEDTERDFFMSPAEAKEYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|350267685|ref|YP_004878992.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. spizizenii TU-B-10]
gi|349600572|gb|AEP88360.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. spizizenii TU-B-10]
Length = 198
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EAL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAL 181
Query: 252 EYGLIDRII 260
EYGLID+I+
Sbjct: 182 EYGLIDKIL 190
>gi|374411914|gb|AEZ48941.1| clp protease proteolytic subunit, partial [Streptochaeta
angustifolia]
Length = 206
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTCRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R +A + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARAPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|238923369|ref|YP_002936885.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|259585954|sp|C4ZGF4.1|CLPP_EUBR3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|238875044|gb|ACR74751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale ATCC 33656]
gi|291525457|emb|CBK91044.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale DSM 17629]
gi|291528435|emb|CBK94021.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Eubacterium
rectale M104/1]
Length = 193
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 125/190 (65%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IF+G+ ++E ++ ++A +L+L+S D +K +
Sbjct: 4 VPYVIEQTSRGERNY---DIYSRLLKDRIIFLGEEVNETTASLVVAQLLFLESEDPNKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ +K V T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 HLYINSPGGMVTAGLAIYDTMQYIKCDVSTICIGLAASMGAFLLAGGAKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA +I+ A+ +L+ + + + L+ TG+P+E I D R +QEA
Sbjct: 121 MIHQPSGGAKGQATEIQIAAENILKTKKRLNEILAANTGKPYETIAADTERDNYMSAQEA 180
Query: 251 LEYGLIDRII 260
EYGLID +I
Sbjct: 181 AEYGLIDSVI 190
>gi|172035557|ref|YP_001802058.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354554806|ref|ZP_08974109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171697011|gb|ACB49992.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353552960|gb|EHC22353.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 202
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E SN I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + L+ TGQP +KI +D R ++EA E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNNHLANHTGQPLDKIAEDTERDFFMSAEEAQE 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|397691263|ref|YP_006528517.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
gi|395812755|gb|AFN75504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Melioribacter
roseus P3M]
Length = 222
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 123/190 (64%), Gaps = 3/190 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + +D+++ L RER++F+G ID+ ++ I+A +L+L++ D K +Y
Sbjct: 22 VPYVIEQT-GRGE-RGMDIFSRLLRERIVFLGTAIDDHIASLIIAQLLFLEAEDPDKDIY 79
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ LAIYDTM+ ++S V T CVG A + LLAGGE G RSA+P S+I
Sbjct: 80 LYINSPGGSVSAGLAIYDTMKYIRSKVSTICVGLAASMGAVLLAGGEAGKRSALPHSKIM 139
Query: 192 LDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQ DI A E+++ RD I+K L+ TG+ +E+I KD R ++EA
Sbjct: 140 IHQPWVGGLQGQTTDIEIHAKEMIKTRDTIYKILAEHTGKSYEQIAKDCDRDYFMTAEEA 199
Query: 251 LEYGLIDRII 260
EY LID I+
Sbjct: 200 KEYNLIDNIL 209
>gi|115605046|ref|YP_784498.1| clp protease proteolytic subunit [Piper cenocladum]
gi|122164337|sp|Q06GN5.1|CLPP_PIPCE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|112253775|gb|ABI14496.1| clp protease proteolytic subunit [Piper cenocladum]
Length = 202
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N L+RER++F+GQ +D E SNQI+ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDVYNRLHRERLLFLGQEVDSEISNQIVGLMVYLSIEDGT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+ + + PA + + EA+ELL++R+ + + ++TG P +++DL R
Sbjct: 121 AWVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDLERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQAHGIVDLV 193
>gi|324986501|ref|YP_004276371.1| ATP-dependent Clp protease proteolytic subunit [Pinus nelsonii]
gi|323522689|gb|ADX94937.1| ATP-dependent Clp protease proteolytic subunit [Pinus nelsonii]
Length = 196
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ +IN PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFINCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A + NEA + +R YI K +T P E I +DL R
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEAKHITMLRTYITKCYIERTDNPEEVIQRDLDRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDTV 193
>gi|172039352|ref|YP_001805853.1| ATP-dependent Clp protease proteolytic subunit [Cyanothece sp. ATCC
51142]
gi|354552381|ref|ZP_08971689.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
gi|171700806|gb|ACB53787.1| ATP-dependent Clp protease, proteolytic subunit [Cyanothece sp.
ATCC 51142]
gi|353555703|gb|EHC25091.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. ATCC 51472]
Length = 229
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 77/179 (43%), Positives = 115/179 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D++ ++ I+A +L+LD+ D K + +YIN PGG V LAIY
Sbjct: 42 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SRI + P G A+GQA +I
Sbjct: 102 DTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQPLGGAQGQAVEIEI 161
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E+L ++ + L+ TGQP E I D R +QEA++YGLID++I P + +
Sbjct: 162 QAKEILYIKKRLNDMLAEHTGQPLETIAADTERDFFMSAQEAVDYGLIDQVISRPDLSD 220
>gi|16080507|ref|NP_391334.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221311403|ref|ZP_03593250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|221315730|ref|ZP_03597535.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. NCIB 3610]
gi|221320645|ref|ZP_03601939.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. JH642]
gi|221324930|ref|ZP_03606224.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SMY]
gi|321313004|ref|YP_004205291.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
gi|384177077|ref|YP_005558462.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|402777617|ref|YP_006631561.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
QB928]
gi|418031330|ref|ZP_12669815.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|428281042|ref|YP_005562777.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. natto BEST195]
gi|430758166|ref|YP_007208041.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|449095907|ref|YP_007428398.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
XF-1]
gi|452912837|ref|ZP_21961465.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Bacillus
subtilis MB73/2]
gi|3287962|sp|P80244.3|CLPP_BACSU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Caseinolytic protease; AltName:
Full=Endopeptidase Clp; AltName: Full=Stress protein G7
gi|364506085|pdb|3TT7|A Chain A, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506086|pdb|3TT7|B Chain B, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506087|pdb|3TT7|C Chain C, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506088|pdb|3TT7|D Chain D, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506089|pdb|3TT7|E Chain E, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506090|pdb|3TT7|F Chain F, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|364506091|pdb|3TT7|G Chain G, Structure Of Clpp From Bacillus Subtilis In Complex With
Dfp
gi|1945673|emb|CAB08043.1| hypothetical protein [Bacillus subtilis]
gi|2635967|emb|CAB15459.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. 168]
gi|2668494|gb|AAC46381.1| ClpP [Bacillus subtilis]
gi|291485999|dbj|BAI87074.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. natto BEST195]
gi|320019278|gb|ADV94264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BSn5]
gi|349596301|gb|AEP92488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
subtilis subsp. subtilis str. RO-NN-1]
gi|351472389|gb|EHA32502.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. SC-8]
gi|402482796|gb|AFQ59305.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
QB928]
gi|407962289|dbj|BAM55529.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7613]
gi|407966303|dbj|BAM59542.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
BEST7003]
gi|430022686|gb|AGA23292.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|449029822|gb|AGE65061.1| ATP-dependent Clp protease proteolytic subunit [Bacillus subtilis
XF-1]
gi|452117865|gb|EME08259.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Bacillus
subtilis MB73/2]
Length = 197
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EAL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAL 181
Query: 252 EYGLIDRII 260
EYGLID+I+
Sbjct: 182 EYGLIDKIL 190
>gi|398805269|ref|ZP_10564248.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. CF318]
gi|398092050|gb|EJL82472.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Polaromonas
sp. CF318]
Length = 218
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/214 (38%), Positives = 130/214 (60%), Gaps = 2/214 (0%)
Query: 47 VHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNI 106
V S+Y G+ P G + +G ++ G G + D+++ L +ERVIF+ +
Sbjct: 3 VRNSIYGGVHT-GPQAGALDAQALGMVPMVIEQSGRGERSY-DIYSRLLKERVIFLVGPV 60
Query: 107 DEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFA 166
+++ +N ++A +L+L+S + K + YIN PGG VT +AIYDTMQ +K V T CVG A
Sbjct: 61 NDQTANLVVAQLLFLESENPDKDISFYINSPGGSVTAGMAIYDTMQFIKPDVSTLCVGMA 120
Query: 167 YHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
+ FLL+ G KG R ++P SR+ + P+G A+GQA DI A ++L+ RD + + L+
Sbjct: 121 ASMGAFLLSAGAKGKRFSLPNSRVMIHQPSGGAQGQATDIEIHARDILKTRDQLNRILAA 180
Query: 227 KTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
TGQP EKI +D R +++A EYGL+D++I
Sbjct: 181 NTGQPIEKIERDTERDYFMFAEDAKEYGLVDQVI 214
>gi|48478794|ref|YP_024401.1| ATP-dependent Clp protease proteolytic subunit [Saccharum hybrid
cultivar SP-80-3280]
gi|50812552|ref|YP_054654.1| ATP-dependent Clp protease proteolytic subunit [Saccharum hybrid
cultivar NCo 310]
gi|118614516|ref|YP_899432.1| clp protease proteolytic subunit [Sorghum bicolor]
gi|260677443|ref|YP_003208211.1| clp protease proteolytic subunit [Coix lacryma-jobi]
gi|68052134|sp|Q6ENT9.1|CLPP_SACOF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|75291219|sp|Q6L377.1|CLPP_SACHY RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125863811|sp|A1E9U9.1|CLPP_SORBI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|48478696|gb|AAT44716.1| ATP-dependent Clp protease subunit [Saccharum hybrid cultivar
SP80-3280]
gi|49659536|dbj|BAD27317.1| ATP-dependent protease [Saccharum hybrid cultivar NCo 310]
gi|118201150|gb|ABK79520.1| clp protease proteolytic subunit [Sorghum bicolor]
gi|209361381|gb|ACI43296.1| clp protease proteolytic subunit [Coix lacryma-jobi]
gi|414870043|tpg|DAA48600.1| TPA: hypothetical protein ZEAMMB73_225418 [Zea mays]
Length = 216
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D +
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|400256612|ref|YP_006576139.1| ClpP (chloroplast) [Magnolia denudata]
gi|343887563|gb|AEM65242.1| ClpP [Magnolia denudata]
gi|372862276|gb|AEX98359.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia denudata]
Length = 201
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAPTGEFILEAEELLKLREILTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 AAEAQAHGIVDLV 192
>gi|115374875|ref|ZP_01462148.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
gi|115368093|gb|EAU67055.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Stigmatella
aurantiaca DW4/3-1]
Length = 204
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 122/196 (62%), Gaps = 6/196 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPI P V+ +T GE S+ D+++ L ++R++ +G ID++ SN I++ +L+L+S D
Sbjct: 1 MPI--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDP 55
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T C+G A + LL G KG R ++P
Sbjct: 56 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLP 115
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G RGQA DI +A E+LR+R + + + TGQP E++ KD R G
Sbjct: 116 SSRIMIHQPLGGVRGQATDIEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMG 175
Query: 247 SQEALEYGLIDRIIRP 262
+ E+ YG+ID I P
Sbjct: 176 ATESKAYGIIDEIQNP 191
>gi|148652118|ref|YP_001279211.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter sp.
PRwf-1]
gi|148571202|gb|ABQ93261.1| ATP-dependent Clp protease proteolytic subunit ClpP [Psychrobacter
sp. PRwf-1]
Length = 240
Score = 161 bits (408), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/198 (41%), Positives = 128/198 (64%), Gaps = 6/198 (3%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE S+ D+++ L RERVIF+ +++ +N I+A ML+L++ + K +
Sbjct: 46 VPMVVEQSARGERSF---DIYSRLLRERVIFLTGQVEDNMANLIVAQMLFLEAENPEKDI 102
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LA++DTM +K V T C+G AY + FLLA G+KG R A+ SR+
Sbjct: 103 HLYINSPGGSVSAGLAMFDTMNFIKPDVSTICMGGAYSMGSFLLAAGQKGKRYALANSRV 162
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI A E+L++RD + + L+ +TGQP EKI +D+ R +QEA
Sbjct: 163 MIHQPSGGAQGQATDIEINAREILKIRDRLNRILAERTGQPLEKIERDVERDYWLDAQEA 222
Query: 251 LEYGLIDRII--RPPRIK 266
YGL+D ++ RP K
Sbjct: 223 KAYGLVDEVLERRPEEAK 240
>gi|441480359|gb|AGC38270.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Cryptochloa strictiflora]
Length = 216
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R +A + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARAPEFLLEVEELHKVREMITRIYALRTGKPFWVVSEDMERDIFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|364506078|pdb|3TT6|A Chain A, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506079|pdb|3TT6|B Chain B, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506080|pdb|3TT6|C Chain C, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506081|pdb|3TT6|D Chain D, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506082|pdb|3TT6|E Chain E, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506083|pdb|3TT6|F Chain F, Structure Of Clpp From Bacillus Subtilis In Compressed
State
gi|364506084|pdb|3TT6|G Chain G, Structure Of Clpp From Bacillus Subtilis In Compressed
State
Length = 196
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 4 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 61 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EAL
Sbjct: 121 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAL 180
Query: 252 EYGLIDRII 260
EYGLID+I+
Sbjct: 181 EYGLIDKIL 189
>gi|389843764|ref|YP_006345844.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
gi|387858510|gb|AFK06601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Mesotoga
prima MesG1.Ag.4.2]
Length = 205
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/191 (43%), Positives = 117/191 (61%), Gaps = 1/191 (0%)
Query: 72 TPKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V Y G + + D++ L ER++F+G ID+E SN ++A +L+L+S D K +
Sbjct: 6 APFVPYVVEDRGRGERIFDIYTKLLSERIVFLGWPIDDEVSNIVVAQLLFLESQDPEKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG +T LAIYDTMQ +K + T C+G A + LLAGG KG R A+P SR+
Sbjct: 66 NLYINSPGGSITSGLAIYDTMQYIKPDISTICIGMAASMGAILLAGGTKGKRFALPNSRV 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A G A DI A E+L +RD + K L++ TGQ +KI KD R S EA
Sbjct: 126 MIHQPFGGAEGVAKDIEIRAREILYLRDELNKILAKHTGQSIKKIEKDADRDFFMSSTEA 185
Query: 251 LEYGLIDRIIR 261
+EYG+ID++I
Sbjct: 186 VEYGMIDKVIE 196
>gi|261494048|ref|ZP_05990551.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
gi|261496191|ref|ZP_05992597.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261308143|gb|EEY09440.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. OVINE]
gi|261310214|gb|EEY11414.1| S14 family endopeptidase ClpP [Mannheimia haemolytica serotype A2
str. BOVINE]
Length = 197
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +
Sbjct: 4 VPMVVEQTSKGERSY---DIYSRLLKERIIFLNGQVEDNMANLIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTM +K V T C G A + FLL+ G KG R A+P +RI
Sbjct: 61 YLYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQAASMGAFLLSAGAKGKRFALPHARI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G ARGQA DI+ +A+E+LR++ + ++ +GQ +EK+ D R ++EA
Sbjct: 121 MIHQPLGGARGQATDIQIQAEEILRLKATLTHRMAEHSGQSYEKVLADTERDNFMSAEEA 180
Query: 251 LEYGLIDRII 260
EYGLID+++
Sbjct: 181 AEYGLIDKVL 190
>gi|386760068|ref|YP_006233285.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. JS]
gi|384933351|gb|AFI30029.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. JS]
Length = 196
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EAL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAL 181
Query: 252 EYGLIDRII 260
EYGLID+I+
Sbjct: 182 EYGLIDKIL 190
>gi|413939036|gb|AFW73587.1| hypothetical protein ZEAMMB73_552399 [Zea mays]
gi|413939037|gb|AFW73588.1| hypothetical protein ZEAMMB73_552399 [Zea mays]
gi|413939038|gb|AFW73589.1| hypothetical protein ZEAMMB73_552399 [Zea mays]
gi|413939039|gb|AFW73590.1| hypothetical protein ZEAMMB73_552399 [Zea mays]
Length = 216
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D +
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|94310823|ref|YP_584033.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
metallidurans CH34]
gi|430810194|ref|ZP_19437309.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus sp.
HMR-1]
gi|116243154|sp|Q1LM62.1|CLPP_RALME RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|93354675|gb|ABF08764.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Cupriavidus metallidurans CH34]
gi|429497428|gb|EKZ95961.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus sp.
HMR-1]
Length = 216
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKD 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
V +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SR
Sbjct: 82 VSLYINSPGGSVSAGLAIYDTMQFIKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +
Sbjct: 142 IMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQ 201
Query: 250 ALEYGLIDRII 260
A++YGLID++I
Sbjct: 202 AVDYGLIDKVI 212
>gi|427707070|ref|YP_007049447.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
gi|427359575|gb|AFY42297.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc sp. PCC
7107]
Length = 201
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/186 (43%), Positives = 114/186 (61%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ ID +N I+A ML+LD+ D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQIDSNLANLIVAQMLFLDAEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + L+ TGQP E+I +D R EA EYG
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKKRLNDFLAEHTGQPIERIAEDTERDFFMSPDEAREYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|260887080|ref|ZP_05898343.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|330839143|ref|YP_004413723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402833991|ref|ZP_10882598.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
gi|260863142|gb|EEX77642.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|329746907|gb|AEC00264.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
sputigena ATCC 35185]
gi|402279060|gb|EJU28103.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. CM52]
Length = 206
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/198 (42%), Positives = 129/198 (65%), Gaps = 5/198 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ R+ GE ++ D+++ L ++R++F+G ID+ +N ++A +L+L+S D K +
Sbjct: 9 VPMVVERSNRGERAY---DIYSRLLKDRIVFVGGPIDDNVANVVVAQLLFLESEDPDKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ ++ V T C+G A + LL G KG R A+PL+RI
Sbjct: 66 HLYINSPGGVVTAGLAIYDTMQYIRPDVSTICIGQAASMGSLLLTAGAKGKRYALPLARI 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQ+ DI+ +A E+LR+R+ L++ TGQP EK+ D R ++EA
Sbjct: 126 MIHQPLGGAQGQSTDIQIQAKEILRLREVGNDILAKHTGQPREKLIADTERDNFMTAEEA 185
Query: 251 LEYGLIDRII-RPPRIKE 267
EYGLID +I RP +I++
Sbjct: 186 KEYGLIDEVITRPVKIEK 203
>gi|310820094|ref|YP_003952452.1| ATP-dependent CLP protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
gi|309393166|gb|ADO70625.1| ATP-dependent Clp protease proteolytic subunit 1 [Stigmatella
aurantiaca DW4/3-1]
Length = 207
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/196 (43%), Positives = 122/196 (62%), Gaps = 6/196 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MPI P V+ +T GE S+ D+++ L ++R++ +G ID++ SN I++ +L+L+S D
Sbjct: 4 MPI--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVSNAIVSQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T C+G A + LL G KG R ++P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICIGQAASMGAVLLLAGAKGKRYSLP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G RGQA DI +A E+LR+R + + + TGQP E++ KD R G
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMRAKLNDLIVKHTGQPLERVEKDTDRDYYMG 178
Query: 247 SQEALEYGLIDRIIRP 262
+ E+ YG+ID I P
Sbjct: 179 ATESKAYGIIDEIQNP 194
>gi|291463572|pdb|3KTI|A Chain A, Structure Of Clpp In Complex With Adep1
gi|291463573|pdb|3KTI|B Chain B, Structure Of Clpp In Complex With Adep1
gi|291463574|pdb|3KTI|C Chain C, Structure Of Clpp In Complex With Adep1
gi|291463575|pdb|3KTI|D Chain D, Structure Of Clpp In Complex With Adep1
gi|291463576|pdb|3KTI|E Chain E, Structure Of Clpp In Complex With Adep1
gi|291463577|pdb|3KTI|F Chain F, Structure Of Clpp In Complex With Adep1
gi|291463578|pdb|3KTI|G Chain G, Structure Of Clpp In Complex With Adep1
gi|291463586|pdb|3KTJ|A Chain A, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463587|pdb|3KTJ|B Chain B, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463588|pdb|3KTJ|C Chain C, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463589|pdb|3KTJ|D Chain D, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463590|pdb|3KTJ|E Chain E, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463591|pdb|3KTJ|F Chain F, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463592|pdb|3KTJ|G Chain G, Structure Of Clpp In Complex With Adep2 In Monoclinic
Crystal Form
gi|291463593|pdb|3KTK|A Chain A, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463594|pdb|3KTK|B Chain B, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463595|pdb|3KTK|C Chain C, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463596|pdb|3KTK|D Chain D, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463597|pdb|3KTK|E Chain E, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463598|pdb|3KTK|F Chain F, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463599|pdb|3KTK|G Chain G, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463600|pdb|3KTK|H Chain H, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463601|pdb|3KTK|I Chain I, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463602|pdb|3KTK|J Chain J, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463603|pdb|3KTK|K Chain K, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463604|pdb|3KTK|L Chain L, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463605|pdb|3KTK|M Chain M, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
gi|291463606|pdb|3KTK|N Chain N, Structure Of Clpp In Complex With Adep2 In Triclinic
Crystal Form
Length = 199
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 4 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 61 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EAL
Sbjct: 121 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAL 180
Query: 252 EYGLIDRII 260
EYGLID+I+
Sbjct: 181 EYGLIDKIL 189
>gi|407472866|ref|YP_006787266.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
gi|407049374|gb|AFS77419.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
acidurici 9a]
Length = 194
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IFI I++ ++ ++A +L+L+S D K +
Sbjct: 4 VPVVVEQT-GRGERSY-DIYSRLLKDRIIFISDEINDVTASLVVAQLLFLESEDPDKDIQ 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG +T AIYDTMQ +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 MYINSPGGSITSGFAIYDTMQYIKPDVSTTCIGMAASMGAFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA+DI+ A+ +++ R+ + + LS +TGQP E+I KD R ++EA
Sbjct: 122 IHQPLGGTRGQAEDIKIHAERIIKTREQLNQILSERTGQPLERIEKDTDRDNFMSAEEAK 181
Query: 252 EYGLIDRII 260
EYGLID +I
Sbjct: 182 EYGLIDEVI 190
>gi|260892392|ref|YP_003238489.1| ATP-dependent Clp protease proteolytic subunit [Ammonifex degensii
KC4]
gi|260864533|gb|ACX51639.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ammonifex
degensii KC4]
Length = 200
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/195 (42%), Positives = 126/195 (64%), Gaps = 4/195 (2%)
Query: 67 MMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
M + P V+ +T GE ++ D+++ L ++R+IFIG ID+ +N ++A +L+L++ D
Sbjct: 1 MSSLLVPIVVEQTSRGERAY---DIYSRLLKDRIIFIGGPIDDHLANLVIAQLLFLEAED 57
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K +++YIN PGG VT +AIYDTMQ ++ V T C+G A +A FLLA G KG R A+
Sbjct: 58 PEKDIHLYINSPGGLVTAGMAIYDTMQYIRPDVSTICLGQAASMAAFLLAAGAKGKRYAL 117
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
P +RI L P G +GQA ++ A E++R+R + + LS+ TGQP EKI +D R
Sbjct: 118 PYARIMLHQPLGGFQGQATEVEIHAREIMRMRQVLNELLSKHTGQPVEKIAQDTDRDFFM 177
Query: 246 GSQEALEYGLIDRII 260
+Q+A +YGLID +I
Sbjct: 178 TAQQAKDYGLIDEVI 192
>gi|452991802|emb|CCQ96761.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
ultunense Esp]
Length = 194
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 129/198 (65%), Gaps = 6/198 (3%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + GE S+ D+++ L +ER+IF+G +++ ++ I+A +L+L++
Sbjct: 1 MALVPIVVEQT---NRGERSY---DIYSRLLKERIIFLGGEVNDVTADLIVAQLLFLEAE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K + +YIN PGG V+ AIYDTMQ +K V T C+G A + FLLA G KG R +
Sbjct: 55 DPDKDIQLYINSPGGAVSAGFAIYDTMQYIKPDVSTICIGRAASMGAFLLAAGAKGKRFS 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P S I + P G +GQA+DIR A+++++ R+ I K LS +TGQP EKI++D R
Sbjct: 115 LPNSDIMIHQPLGGTQGQAEDIRIHAEKIIQTRELINKILSERTGQPLEKISRDTDRDFF 174
Query: 245 FGSQEALEYGLIDRIIRP 262
++EA EYG+ID++I+P
Sbjct: 175 MTAKEAKEYGIIDKVIQP 192
>gi|427703523|ref|YP_007046745.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
gi|427346691|gb|AFY29404.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanobium
gracile PCC 6307]
Length = 249
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 122/204 (59%), Gaps = 4/204 (1%)
Query: 60 PIRGRIAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILA 116
P G +A P P VL G G + D+++ L RER+IF+G ID++ ++ ++A
Sbjct: 38 PWNGMVAPSPTAAPGVLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGIDDQVADSLVA 96
Query: 117 TMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAG 176
+L+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A + FLL G
Sbjct: 97 QLLFLEAEDPEKDIQIYINSPGGSVTSGLAIYDTMQQVAPDVVTICYGLAASMGAFLLTG 156
Query: 177 GEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIT 236
G G R A+P +RI + P G A+GQA DI +A E+L ++D + ++ TGQP +KI
Sbjct: 157 GAPGKRMALPNARIMIHQPLGGAQGQAVDIEIQAREILFLKDTLNGLMAEHTGQPLDKIA 216
Query: 237 KDLSRIKRFGSQEALEYGLIDRII 260
+D R EA+EYGLIDR++
Sbjct: 217 EDTDRDYFLSPAEAVEYGLIDRVV 240
>gi|374604920|ref|ZP_09677867.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
gi|374389443|gb|EHQ60818.1| ATP-dependent clp protease proteolytic subunit [Paenibacillus
dendritiformis C454]
Length = 192
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 121/191 (63%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G +++ +N I+A ML+L + D K +
Sbjct: 4 VPIVVEQTNRGERSY---DIYSRLLKDRIIFLGSQVNDVVANSIIAQMLFLQADDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T +AIYDTMQ +K V T CVG A + FLL G KG R A+P S I
Sbjct: 61 HLYINSPGGSITAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A GQA DI A +L++RD + L+ +TGQP ++I +D R ++EA
Sbjct: 121 MIHQPLGGAEGQASDIEIRARRILKMRDKLNHILAERTGQPLDRIERDTDRDYFMSAEEA 180
Query: 251 LEYGLIDRIIR 261
LEYGL+D+++
Sbjct: 181 LEYGLVDKVLH 191
>gi|307150040|ref|YP_003885424.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306980268|gb|ADN12149.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 203
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 124/199 (62%), Gaps = 3/199 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L R+R++F+GQ + + +N I+A +L+L+S D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRDRIVFLGQEVTNDLANLIVAQLLFLESEDPDKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLNAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ +TGQP EKI +D R ++EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNQHLASRTGQPLEKIAEDTERDFFMSAEEAKD 180
Query: 253 YGLIDRII-RPPRIKEDMP 270
YGLID++I R P +P
Sbjct: 181 YGLIDQVINRRPSASNPLP 199
>gi|118430326|ref|YP_874761.1| ATP-dependent Clp protease proteolytic subunit [Agrostis
stolonifera]
gi|125863779|sp|A1EA33.1|CLPP_AGRST RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118201235|gb|ABK79604.1| clp protease proteolytic subunit [Agrostis stolonifera]
Length = 216
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGVAASMASFVLIGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I K + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITKVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|118430411|ref|YP_874677.1| clp protease proteolytic subunit [Hordeum vulgare subsp. vulgare]
gi|126302533|sp|P48883.2|CLPP_HORVU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118201065|gb|ABK79436.1| clp protease proteolytic subunit [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPAKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|428201398|ref|YP_007079987.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427978830|gb|AFY76430.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 272
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 115/179 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G ID++ ++ I+A +LYLD+ D K + +YIN PGG V AIY
Sbjct: 85 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLDAEDPEKDIQLYINSPGGSVYAGFAIY 144
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
D MQ ++ V T C G A + FLL+GG KG R A+P +R+ + P G A+GQA +I
Sbjct: 145 DAMQQVRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSARLMIHQPIGGAQGQAVEIEI 204
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E+L ++ + + L+ TGQP+EKI D R +QEA EYGLIDR+I P + +
Sbjct: 205 QAREILYMKQRLNELLAIHTGQPYEKIATDTERDFYMSAQEAQEYGLIDRVISRPTLSD 263
>gi|291463558|pdb|3KTG|A Chain A, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463559|pdb|3KTG|B Chain B, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463560|pdb|3KTG|C Chain C, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463561|pdb|3KTG|D Chain D, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463562|pdb|3KTG|E Chain E, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463563|pdb|3KTG|F Chain F, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463564|pdb|3KTG|G Chain G, Structure Of Clpp From Bacillus Subtilis In Monoclinic
Crystal Form
gi|291463565|pdb|3KTH|A Chain A, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463566|pdb|3KTH|B Chain B, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463567|pdb|3KTH|C Chain C, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463568|pdb|3KTH|D Chain D, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463569|pdb|3KTH|E Chain E, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463570|pdb|3KTH|F Chain F, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
gi|291463571|pdb|3KTH|G Chain G, Structure Of Clpp From Bacillus Subtilis In Orthorombic
Crystal Form
Length = 199
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +
Sbjct: 4 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLAAEDPEKEIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 61 LYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EAL
Sbjct: 121 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAL 180
Query: 252 EYGLIDRII 260
EYGLID+I+
Sbjct: 181 EYGLIDKIL 189
>gi|284047279|ref|YP_003397619.1| endopeptidase Clp [Conexibacter woesei DSM 14684]
gi|283951500|gb|ADB54244.1| Endopeptidase Clp [Conexibacter woesei DSM 14684]
Length = 194
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 125/194 (64%), Gaps = 5/194 (2%)
Query: 67 MMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
M P+ P V+ ++P GE S+ D+++ L ERVIF+GQ ++++ +N ++A +L+L+SVD
Sbjct: 1 MSPL-VPMVVEQSPRGERSF---DIYSRLLNERVIFLGQEVNDDIANLVVAQLLHLESVD 56
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K + +YIN PGG V+ AIYDTMQ ++ V T CVG A + FLL GG G R ++
Sbjct: 57 ADKDINLYINSPGGSVSAGFAIYDTMQLIRPDVATICVGIAMSMGSFLLCGGASGKRMSL 116
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
P SRI P+G +GQA DI+ A+E L R + + + TGQP E+I D+ R + F
Sbjct: 117 PNSRILNHQPSGGFQGQATDIQIHAEEALAARRRLEELYALHTGQPIERIHDDMERDRYF 176
Query: 246 GSQEALEYGLIDRI 259
++A+EYGLID+I
Sbjct: 177 TPEQAVEYGLIDKI 190
>gi|78780133|ref|YP_398245.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
gi|115311352|sp|Q317Y6.1|CLPP4_PROM9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 4;
AltName: Full=Endopeptidase Clp 4
gi|78713632|gb|ABB50809.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9312]
Length = 219
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 119/192 (61%), Gaps = 1/192 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
IG + G G + D+++ L RER+IF+G I+++ S+ ++A +L+L++ D K
Sbjct: 28 IGAVPTVIEQSGRGERAF-DIYSRLLRERIIFLGSGINDQVSDSLVAQLLFLEAEDPEKD 86
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG VT +AIYDTMQ + V T C G A + FLL+GG KG R A+P SR
Sbjct: 87 IQIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSR 146
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P G A+GQA +I +A E+L ++ + L+ TGQP EKI +D R E
Sbjct: 147 IMIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSE 206
Query: 250 ALEYGLIDRIIR 261
A+EYGLID++I+
Sbjct: 207 AVEYGLIDKVIK 218
>gi|134300401|ref|YP_001113897.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
reducens MI-1]
gi|172044337|sp|A4J7L9.1|CLPP_DESRM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|134053101|gb|ABO51072.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Desulfotomaculum reducens MI-1]
Length = 195
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IFIG ID+ +N ++A L+L++ D K +
Sbjct: 5 VPIVVEQTNRGERAY---DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ +K V T C+G A + FLLA G G R A+P++RI
Sbjct: 62 HLYINSPGGVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAPGKRYALPMARI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+LR++D + L+ TGQP E+IT+D R ++EA
Sbjct: 122 MIHQPLGGVQGQATDIDIHAKEILRMKDLLNDRLAHHTGQPLEQITRDTERDYFMSAEEA 181
Query: 251 LEYGLIDRII 260
+YGLID ++
Sbjct: 182 KKYGLIDEVM 191
>gi|11466814|ref|NP_039410.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa
Japonica Group]
gi|12012|emb|CAA33972.1| unnamed protein product [Oryza sativa Japonica Group]
gi|226633|prf||1603356BG ORF 216
Length = 216
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D S
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGS 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A + F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPNIYTTCLGIAASMPSFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|410697314|gb|AFV76382.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermus
oshimai JL-2]
Length = 194
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 118/172 (68%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N ++A +L+LD+ + ++ + +YIN PGG+V LAIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDAQVANTVVAQLLFLDAQNPNQEIRLYINSPGGEVDAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +++PV T +G A +A +LA GEKG R A+P +++ + P G ARG A DI
Sbjct: 78 DTMQFVRAPVSTIVIGMAASMAAVILAAGEKGRRYALPHAKVMIHQPWGGARGTASDIAI 137
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L+ + + + L++ TGQP EK+ +D R ++EALEYGLID+++
Sbjct: 138 QAQEILKAKKLLNEILAKHTGQPLEKVERDTDRDYYLSAKEALEYGLIDQVV 189
>gi|374249644|ref|YP_005089171.1| clpP gene product [Rhynchoryza subulata]
gi|346228496|gb|AEO21368.1| clp protease proteolytic subunit [Rhynchoryza subulata]
Length = 216
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILVGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|297182365|gb|ADI18531.1| protease subunit of ATP-dependent clp proteases [uncultured SAR406
cluster bacterium HF4000_22B16]
Length = 202
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 116/172 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER++F+G ID+ S+ I+A L+L++ D K +Y+YIN PGG +T +AI+
Sbjct: 27 DIYSRLLKERIVFLGTPIDDSISSLIIAQFLFLEAEDPDKDIYLYINSPGGYITAGMAIF 86
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTM +K V T C+G A + FLLAGG+KG RSA+P SRI + P G A GQA DI+
Sbjct: 87 DTMNYIKPDVATICMGQASSMGAFLLAGGKKGKRSALPNSRIMIHQPMGGAEGQASDIKI 146
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+ADE++R+R + K L+++TGQ K+ KD R + EA +YG+ID ++
Sbjct: 147 QADEIIRLRGKLNKLLAKQTGQKISKVEKDSDRNYFMSAVEAKKYGIIDTVL 198
>gi|116071740|ref|ZP_01469008.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
gi|116065363|gb|EAU71121.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. BL107]
Length = 224
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 85/209 (40%), Positives = 127/209 (60%), Gaps = 5/209 (2%)
Query: 56 RNDKPIRGRI-AMMPIGTP---KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
R+ PI+ R + MPI P + G G + D+++ L RER+IF+G +D+ +
Sbjct: 5 RSHHPIQNRWRSEMPISAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVA 63
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
+ ++A ML+L++ D K + +Y+N PGG VT LAIYDTMQ + V T C G A +
Sbjct: 64 DALVAQMLFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGA 123
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 231
FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + ++ TGQP
Sbjct: 124 FLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLMAEHTGQP 183
Query: 232 FEKITKDLSRIKRFGSQEALEYGLIDRII 260
KI++D R EA+EYGLIDR++
Sbjct: 184 LAKISEDTDRDYFLSPAEAVEYGLIDRVV 212
>gi|389578265|ref|ZP_10168292.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
gi|389399900|gb|EIM62122.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacter
postgatei 2ac9]
Length = 208
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 126/207 (60%), Gaps = 3/207 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ V GE ++ D+++ L ++R+IF+G ID+E +N I+A ML+L+S D
Sbjct: 1 MPLIPMVVEQSNRGERAY---DIYSRLLKDRIIFLGSAIDDEVANLIVAQMLFLESEDPD 57
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + YIN PGG VT +AIYDT+Q +K V T C+G A + LL G G R A+P
Sbjct: 58 KDINFYINSPGGVVTAGMAIYDTIQYIKPDVATVCIGQAASMGALLLTAGTAGKRFALPN 117
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G A+GQA DI+ +A E+LR++D + + LS+ TGQ E++ D R
Sbjct: 118 ARIMIHQPMGGAQGQATDIKIQATEILRMKDVLNEILSKHTGQNIERVAADTERDFFMSG 177
Query: 248 QEALEYGLIDRIIRPPRIKEDMPRKDA 274
Q+ALEYG++DR++ E+ ++A
Sbjct: 178 QQALEYGIVDRVVSDRSQLEETSEEEA 204
>gi|332798601|ref|YP_004460100.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|438001582|ref|YP_007271325.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|332696336|gb|AEE90793.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
gi|432178376|emb|CCP25349.1| ATP-dependent Clp protease proteolytic subunit [Tepidanaerobacter
acetatoxydans Re1]
Length = 194
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 111/173 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IFIG +ID+ ++ +A MLYL+S D K + +YIN PGG VT LAIY
Sbjct: 19 DIYSRLLKERIIFIGTSIDDTVASLAIAQMLYLESEDPDKDIRLYINSPGGSVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LLA G +G R A+P SRI + P G +G+A DI
Sbjct: 79 DTMQYIKPDVSTICMGLAASMGAVLLAAGTEGKRYALPNSRIMIHQPWGGVQGKAVDIET 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
A E+LR+R+ + + L+ T Q EKI KD R S+EALEYGLID +I
Sbjct: 139 HAKEILRLRELLNEILANHTKQSIEKIEKDTDRDYFMSSKEALEYGLIDEVIH 191
>gi|158522703|ref|YP_001530573.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
gi|259585950|sp|A8ZXB7.1|CLPP_DESOH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|158511529|gb|ABW68496.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfococcus
oleovorans Hxd3]
Length = 205
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/194 (42%), Positives = 125/194 (64%), Gaps = 5/194 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE ++ D+++ L ++R++FIG ID+E +N ++A +L+L+S D
Sbjct: 1 MPL-IPMVIEQTSRGERAF---DIYSRLLKDRIVFIGSAIDDETANLLIAQLLFLESEDP 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + YIN PGG V+ +AIYDTMQ +KS + T C+G A + FLLA G KG R ++P
Sbjct: 57 DKDINFYINSPGGKVSAGMAIYDTMQYIKSDIATVCIGHAASMGAFLLAAGAKGKRFSLP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+GQA DI +A E+LR++D + + L+ TG+P E+I D R
Sbjct: 117 NSRIMIHQPMGGAQGQASDIAIQAKEILRMKDILNQILAHHTGKPLEQIQVDTDRDFFMS 176
Query: 247 SQEALEYGLIDRII 260
+EA YG++D +I
Sbjct: 177 GEEAKAYGIVDHVI 190
>gi|332708809|ref|ZP_08428780.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332352351|gb|EGJ31920.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 230
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D+ ++ I+A +LYL++ D+ K + +YIN PGG VT +AIY
Sbjct: 44 DIYSRLLRERIVFLGTQVDDVVADSIVAQLLYLEAEDEEKDIQLYINSPGGSVTAGMAIY 103
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLAGG G R A+P SRI + P G A+GQA DI
Sbjct: 104 DTMQQVRPDVVTICYGLAASMGAFLLAGGAAGKRMALPNSRIMIHQPLGGAQGQAVDIEI 163
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+L + + + L+ TGQP E+I +D R + EA +YGLID++I +++
Sbjct: 164 QAREILYHKQTLNQLLANHTGQPVEQIAEDTERDFFMSAAEAKDYGLIDQVIS----RQN 219
Query: 269 MPRKDAGTG 277
+P ++A
Sbjct: 220 LPNQEAAVA 228
>gi|157364285|ref|YP_001471052.1| ATP-dependent Clp protease proteolytic subunit [Thermotoga
lettingae TMO]
gi|167008651|sp|A8F754.1|CLPP_THELT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157314889|gb|ABV33988.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermotoga
lettingae TMO]
Length = 199
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 113/176 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N ++A +L+L++ D K + +YIN PGG VT LAIY
Sbjct: 23 DIYSRLLKDRIVFLGYAIDDHVANLVVAQLLFLEAEDPDKDIQLYINSPGGSVTAGLAIY 82
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +KS V T CVG A +A LLA G KG R A+P +RI L P G A G D+
Sbjct: 83 DTMQYIKSDVVTICVGQAASMAAVLLASGTKGKRFALPNARIMLHQPLGGAEGPVKDVEI 142
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 264
ELLR+++ I LS KTGQP ++I KD R + EAL+YGL+D++I R
Sbjct: 143 ITKELLRIKNLINTILSEKTGQPLDRIEKDTDRDFFMSAYEALDYGLVDKVIESKR 198
>gi|434399019|ref|YP_007133023.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428270116|gb|AFZ36057.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 227
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 113/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G ID++ ++ I+A +LYL++ D K + +YIN PGG V +AIY
Sbjct: 41 DIYSRLLRERIVFLGTPIDDKVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYSGMAIY 100
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ + T C G A + FLL+GG KG R A+P SRI + P G A+GQA DI
Sbjct: 101 DTMQQIQPDIVTICYGIAASMGAFLLSGGTKGKRMALPSSRIMIHQPLGGAQGQAVDIEI 160
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L ++ + ++ TGQPFEK+ D R +QEA EYGLID++I
Sbjct: 161 QAREILYIKKRLNDLIAEHTGQPFEKVAADTERDFYMSAQEAQEYGLIDQVI 212
>gi|374411898|gb|AEZ48933.1| clp protease proteolytic subunit, partial [Pandanus utilis]
Length = 201
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 122/194 (62%), Gaps = 2/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGEG WVD+ N L+RER++F+GQ +D E SN ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEGDAVWVDV-NRLHRERLLFLGQEVDNEVSNHLVGLMVYLSIEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGEWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEMTKRIAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + +A + EA+ELL++R+ + K ++TG P +++D+
Sbjct: 120 ARVMIHQPASSFYEAKAGEFILEAEELLKLRETLTKVYVQRTGNPLWIVSEDMEWDVSMS 179
Query: 247 SQEALEYGLIDRII 260
+ EA YG++D ++
Sbjct: 180 ATEAQAYGIVDLVV 193
>gi|323703643|ref|ZP_08115286.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333922902|ref|YP_004496482.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
gi|323531415|gb|EGB21311.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum nigrificans DSM 574]
gi|333748463|gb|AEF93570.1| ATP-dependent Clp protease proteolytic subunit [Desulfotomaculum
carboxydivorans CO-1-SRB]
Length = 195
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IFIG ID+ +N ++A L+L++ D K +
Sbjct: 5 VPIVVEQTNRGERAY---DIYSRLLKDRIIFIGGPIDDHIANLVIAQFLFLEAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ +K V T C+G A + FLLA G KG R A+P +RI
Sbjct: 62 HLYINSPGGVVTAGLAIYDTMQYIKPAVSTICLGQAASMGSFLLAAGAKGKRYALPQARI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+LR+R+ + + LS TGQP EKI +D R ++EA
Sbjct: 122 MIHQPLGGVQGQATDIDIHAREILRMREILNERLSHHTGQPLEKIARDTERDFFMSAEEA 181
Query: 251 LEYGLIDRII 260
+YG+ID ++
Sbjct: 182 KKYGIIDEVM 191
>gi|430750770|ref|YP_007213678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430734735|gb|AGA58680.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 198
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/184 (43%), Positives = 116/184 (63%), Gaps = 3/184 (1%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L ++R+IF+G ID++ +N ++A +L+L + D K +Y+YIN PGG
Sbjct: 14 GERSY---DIYSRLLKDRIIFLGSPIDDDVANLVIAQLLFLAAEDPEKDIYLYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT L IYDTMQ +K V T CVG A +A LL G KG R A+P S + + P G R
Sbjct: 71 VTAGLGIYDTMQYIKPDVSTICVGIAASMASLLLTAGAKGKRYALPNSEVMIHQPLGGVR 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
GQA DI+ AD +L+ + + + +TGQP+EKI +D R ++EAL YGLID++I
Sbjct: 131 GQAADIKIHADWILKTKHKLNQIYVERTGQPYEKIERDTDRDFFMSAEEALAYGLIDKVI 190
Query: 261 RPPR 264
P
Sbjct: 191 TRPE 194
>gi|186686250|ref|YP_001869446.1| ATP-dependent Clp protease proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
gi|186468702|gb|ACC84503.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc
punctiforme PCC 73102]
Length = 203
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 115/186 (61%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +LYLD+ D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDNNIANLIVAQLLYLDAEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + L+ TGQP E+I +D R +EA EYG
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKKRLNDYLADHTGQPIERIAEDTERDFFMSPEEAREYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|78183646|ref|YP_376080.1| peptidase S14, ClpP [Synechococcus sp. CC9902]
gi|124013821|sp|Q3B0U1.1|CLPP2_SYNS9 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|78167940|gb|ABB25037.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9902]
Length = 207
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 121/196 (61%), Gaps = 4/196 (2%)
Query: 68 MPIGTP---KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
MPI P + G G + D+++ L RER+IF+G +D+ ++ ++A ML+L++
Sbjct: 1 MPISAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAE 59
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K + +Y+N PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R A
Sbjct: 60 DPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLA 119
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P +RI + P G A+GQA DI +A E+L +++ + L+ TGQP +KI++D R
Sbjct: 120 LPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLDKISEDTDRDYF 179
Query: 245 FGSQEALEYGLIDRII 260
EA+EYGLIDR++
Sbjct: 180 LSPAEAVEYGLIDRVV 195
>gi|443315652|ref|ZP_21045132.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
gi|442784746|gb|ELR94606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 6406]
Length = 201
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/188 (42%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER+IF+GQ + + +N I+A ML+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIIFLGQEVTSDSANLIVAQMLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
Y+N PGG VT L I+DTM ++ V T CVG A + FLLA G+KG R ++P +RI +
Sbjct: 61 YVNSPGGSVTAGLGIFDTMNHIRPDVCTICVGLAASMGSFLLAAGKKGKRMSLPNARIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + L++ TGQ EKIT D R +A+E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNGALAKNTGQSLEKITADTERDFFLSPHQAME 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|407981209|ref|ZP_11161953.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
HYC-10]
gi|407411926|gb|EKF33805.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
HYC-10]
Length = 198
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + + LS +TGQP E I +D R ++EAL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLSERTGQPIEVIERDTDRDNFKTAEEAL 181
Query: 252 EYGLIDRII 260
EYGLID+++
Sbjct: 182 EYGLIDKVL 190
>gi|308745997|ref|YP_003934583.1| clp protease proteolytic subunit [Cheilanthes lindheimeri]
gi|302375430|gb|ADL29804.1| clp protease proteolytic subunit [Cheilanthes lindheimeri]
Length = 200
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 124/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE VD++N LYRER++F+GQ +D+E +NQ++ M+YL+ D +
Sbjct: 1 MPIGVPKVPFRLPGEEDAVRVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDQA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+Y+N PGG V +++YD MQ + V T C+G A + +LAGGE R A+P
Sbjct: 61 KDMYLYVNSPGGAVLAGISVYDAMQFVVPDVHTICMGLAASMGSSILAGGEITRRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E ++RD I + +++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEASKLRDCITRVYAQRTGKPLWIISEDMERDVFSS 180
Query: 247 SQEALEYGLIDRI 259
++EA +YG+ D +
Sbjct: 181 AEEAQDYGVADLV 193
>gi|315650622|ref|ZP_07903682.1| ATP-dependent Clp protease proteolytic subunit [Lachnoanaerobaculum
saburreum DSM 3986]
gi|315487119|gb|EFU77441.1| ATP-dependent Clp protease proteolytic subunit [Lachnoanaerobaculum
saburreum DSM 3986]
Length = 193
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 126/191 (65%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ T GE ++ D+++ L ++R+IF+G+ +++ ++ ++A +L+L+S D +K +
Sbjct: 4 VPTVIESTSRGERAF---DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V +AIYDTMQ +K V T C+G A +A FLLAGG KG R A+P + I
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMAAFLLAGGTKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA +IR A+++L+ R+ + K L+ T QP E I +D R ++EA
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTREKMNKILAENTNQPIEVIERDTERDNYMSAKEA 180
Query: 251 LEYGLIDRIIR 261
L+YG+ID++I
Sbjct: 181 LDYGIIDKVIE 191
>gi|73541074|ref|YP_295594.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
JMP134]
gi|124013825|sp|Q472D3.1|CLPP_RALEJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|72118487|gb|AAZ60750.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ralstonia
eutropha JMP134]
Length = 216
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFLVGEVNDQTANLVVAQLLFLESENPDKD 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SR
Sbjct: 82 ISLYINSPGGSVSAGLAIYDTMQFVKPDVQTLCMGMAASMGAFLLAAGAKGKRSALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +
Sbjct: 142 IMIHQPLGGARGQASDIEIQAREILYLRERLNSILSEVTGQPVEKIARDTDRDNFMSGDQ 201
Query: 250 ALEYGLIDRII 260
A++YGLID++I
Sbjct: 202 AVDYGLIDKVI 212
>gi|374411918|gb|AEZ48943.1| clp protease proteolytic subunit, partial [Tradescantia ohiensis]
Length = 201
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/199 (41%), Positives = 124/199 (62%), Gaps = 8/199 (4%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP- 186
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGMAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 187 -----LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLS 240
+ R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+
Sbjct: 120 AMVFYIIRVMIHQPASSFYEAQAGEFILEAEELLKLRETLTRIYVQRTGKPLWVVSEDME 179
Query: 241 RIKRFGSQEALEYGLIDRI 259
R + EA +G++D +
Sbjct: 180 RDVFMSAIEAQAHGIVDLV 198
>gi|108762291|ref|YP_630243.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|338533213|ref|YP_004666547.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|116270726|sp|Q1DAT0.1|CLPP1_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|108466171|gb|ABF91356.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
gi|337259309|gb|AEI65469.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 206
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 124/199 (62%), Gaps = 6/199 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R++ +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T CVG A + LL G KG R A+P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G RGQA DI +A E+LR++ + + + + TGQ E++ KD R G
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMG 178
Query: 247 SQEALEYGLIDRIIRPPRI 265
+ EA YG+ID I P ++
Sbjct: 179 ASEAKAYGIIDEIQNPRKV 197
>gi|83589392|ref|YP_429401.1| ATP-dependent Clp protease proteolytic subunit [Moorella
thermoacetica ATCC 39073]
gi|115311785|sp|Q2RL31.1|CLPP_MOOTA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|83572306|gb|ABC18858.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorella
thermoacetica ATCC 39073]
Length = 199
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 83/206 (40%), Positives = 127/206 (61%), Gaps = 8/206 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M + P V+ +T GE ++ D+++ L ++R+IF+G ID+ +N ++A ML+L++ D
Sbjct: 1 MSVLVPMVVEQTSRGERAY---DIYSRLLKDRIIFLGSAIDDHVANLVIAQMLFLEAEDP 57
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG ++ +AI+DTMQ ++ V T CVG A + FLLA G KG R A+P
Sbjct: 58 DKDIHLYINSPGGSISAGMAIFDTMQYIRPDVSTICVGLAASMGAFLLAAGAKGKRFALP 117
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
S I + P G +GQA DI A +L +RD + + LS TG+P E+I +D R
Sbjct: 118 NSEIMIHQPMGGTQGQAVDIEIHAKRILAIRDNLNRILSEITGKPLEQIARDTDRDHFMT 177
Query: 247 SQEALEYGLIDRIIRPPRIKEDMPRK 272
++EA EYGLID +I K ++P K
Sbjct: 178 AREAREYGLIDEVI----TKRELPAK 199
>gi|354566299|ref|ZP_08985472.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
gi|353546807|gb|EHC16255.1| ATP-dependent Clp protease proteolytic subunit [Fischerella sp.
JSC-11]
Length = 201
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ ID+ +N I+A +L+LD+ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQAIDDNVANLIVAQLLFLDAEDPEKDIYVYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DI +A E+L + + + L+ TGQP EKI +D R +EA +YG
Sbjct: 123 PLGGARGQATDIEIQAREILYHKRRLNEYLAEHTGQPLEKIAEDTERDFFMSPEEARDYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|290489450|gb|ADD31109.1| clp protease proteolytic subunit protein [Phoradendron serotinum]
Length = 196
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 121/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R PGE WVD++N LYRER++F+GQ +D E SNQ+++ M+YL +++
Sbjct: 1 MPIGVPRVPFRIPGEEYSTWVDIYNRLYRERLLFLGQGVDSEISNQLISLMVYLSIENET 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K Y +IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG R A P
Sbjct: 61 KDFYFFINSPGGWVIPGVAIYDTMQFVRPDVQTICMGLAASMGSFILVGGSITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG+ +++D+ R
Sbjct: 121 ARVMIHQPASSYFEAQTVEFILEAEELLKLRETLTQVYVQRTGKTLWIVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 181 ATEAQTHGIVDLV 193
>gi|113867496|ref|YP_725985.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia eutropha
H16]
gi|194289504|ref|YP_002005411.1| ATP-dependent clp protease proteolytic subunit [Cupriavidus
taiwanensis LMG 19424]
gi|339325652|ref|YP_004685345.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
N-1]
gi|123033071|sp|Q0KBK4.1|CLPP_RALEH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|226706449|sp|B3R4W1.1|CLPP_CUPTR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113526272|emb|CAJ92617.1| Endopeptidase Clp (type 1) [Ralstonia eutropha H16]
gi|193223339|emb|CAQ69344.1| proteolytic subunit of clpA-clpP ATP-dependent serine protease
[Cupriavidus taiwanensis LMG 19424]
gi|338165809|gb|AEI76864.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
N-1]
Length = 216
Score = 160 bits (406), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVVFMVGEVNDQTANLVVAQLLFLESENPDKD 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
V +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG RSA+P SR
Sbjct: 82 VSLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRSALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +
Sbjct: 142 IMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQ 201
Query: 250 ALEYGLIDRII 260
A++YGLID+++
Sbjct: 202 AVDYGLIDKVL 212
>gi|225378750|ref|ZP_03755971.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
gi|225209409|gb|EEG91763.1| hypothetical protein ROSEINA2194_04420 [Roseburia inulinivorans DSM
16841]
Length = 202
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 131/200 (65%), Gaps = 5/200 (2%)
Query: 62 RGRIAMMPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLY 120
+G++ M + P V+ +T GE ++ D+++ L ++R+IF+G+ ++E ++ ++A +L+
Sbjct: 4 KGQVRDMSL-VPYVIEQTSRGERNY---DIYSRLLKDRIIFLGEEVNETTASLVVAQLLF 59
Query: 121 LDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKG 180
L+S D K +++YIN PGG VT LAIYDTMQ +K V T C+G A + FLLAGG KG
Sbjct: 60 LESEDPGKDIHLYINSPGGMVTAGLAIYDTMQYIKCDVSTICIGMAASMGAFLLAGGAKG 119
Query: 181 NRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLS 240
R A+P + I + P+G A+GQA +I+ A+ +L+ + + + L+ TG+P++ I D
Sbjct: 120 KRLALPNAEIMIHQPSGGAKGQATEIQIAAENILKTKKKLNEILAANTGKPYDVIAADTE 179
Query: 241 RIKRFGSQEALEYGLIDRII 260
R +QEA+EYGLID +I
Sbjct: 180 RDHYMSAQEAMEYGLIDNVI 199
>gi|145589117|ref|YP_001155714.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
gi|145047523|gb|ABP34150.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. asymbioticus
QLW-P1DMWA-1]
Length = 209
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L RERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 16 LGLVPMVIETSGRGERAY-DIYSRLLRERVVFLVGEVNDQTANLVIAQLLFLESENPDKD 74
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL GEKG R A+P SR
Sbjct: 75 ISLYINSPGGSVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGEKGKRYALPNSR 134
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
+ + P G ARGQA DI +A E+L +R+ + K L+ +TGQ + I KD R +++
Sbjct: 135 VMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIDTIAKDTDRDNFMSAEQ 194
Query: 250 ALEYGLIDRII 260
A EYGLID++I
Sbjct: 195 AREYGLIDKVI 205
>gi|425737678|ref|ZP_18855949.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
gi|425481335|gb|EKU48495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
massiliensis S46]
Length = 195
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G +D+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQVDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRYALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R + K LS +TGQP +KI KD R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTRAKLNKILSERTGQPIDKIEKDTDRDNFLTAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 182 EYGLIDEVMAP 192
>gi|426406663|ref|YP_007026577.1| clp protease proteolytic subunit [Festuca ovina]
gi|410177877|gb|AFV62757.1| clp protease proteolytic subunit [Festuca ovina]
Length = 214
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|289548353|ref|YP_003473341.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
gi|289181970|gb|ADC89214.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermocrinis
albus DSM 14484]
Length = 199
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 123/191 (64%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L ++R++ +G ID+ +N I+A +L+L++ D K +
Sbjct: 9 VPIVIEQTPRGERAY---DIYSRLLQDRIVLLGYPIDDHVANLIVAQLLFLEAQDPEKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT +AIYDTMQ +K V T C+G A +A LLA G KG R ++P SRI
Sbjct: 66 YMYINSPGGSVTAGMAIYDTMQYIKPDVVTICIGQAASMAAVLLAAGAKGKRYSLPHSRI 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G GQA DI A+E+ R++ + + +++ TGQP K+ +D+ R + EA
Sbjct: 126 MIHQPMGGISGQATDIIIHAEEIKRIKHMLNEIIAKHTGQPLSKVEQDVERDYFMSAYEA 185
Query: 251 LEYGLIDRIIR 261
+EYG++D++I
Sbjct: 186 MEYGIVDKVIE 196
>gi|399050842|ref|ZP_10740886.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|433542108|ref|ZP_20498542.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
gi|398051558|gb|EJL43880.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. CF112]
gi|432186623|gb|ELK44090.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus agri
BAB-2500]
Length = 193
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+I +G ID+E +N ++A +L+L + D K +
Sbjct: 4 PMVIEQTSRGERSY---DIYSRLLKDRIILLGTEIDDEVANLVVAQLLFLQAEDPEKDIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T CVG A + FLLA G KG R A+P S +
Sbjct: 61 LYINSPGGSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA+DIR A+ +L+ + + + LS +TGQP+E++ D R ++EA
Sbjct: 121 IHQPLGGVRGQAEDIRIHAEWILKTKRQLNQILSERTGQPYERVELDTDRDNFMSAEEAK 180
Query: 252 EYGLIDRII 260
YGLID II
Sbjct: 181 AYGLIDTII 189
>gi|14017596|ref|NP_114282.1| ATP-dependent Clp protease proteolytic subunit [Triticum aestivum]
gi|17374148|sp|P24064.2|CLPP_WHEAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13928229|dbj|BAB47058.1| ATP-dependent protease proteolytic subunit [Triticum aestivum]
Length = 216
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYAVRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|124023248|ref|YP_001017555.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9303]
gi|123963534|gb|ABM78290.1| Clp protease subunit [Prochlorococcus marinus str. MIT 9303]
Length = 197
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G G RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L ++D + + L+ +TGQP E+I +D R EA+ YG
Sbjct: 123 PLGGARGQASDIRIQADEILFLKDRLNRVLADRTGQPLERIQEDTDRDFFMSPTEAVGYG 182
Query: 255 LIDRII 260
L+D +I
Sbjct: 183 LVDSVI 188
>gi|226311381|ref|YP_002771275.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
gi|226094329|dbj|BAH42771.1| ATP-dependent Clp protease proteolytic subunit [Brevibacillus
brevis NBRC 100599]
Length = 193
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+I +G ID+E +N I+A +L+L + D K +
Sbjct: 4 PMVIEQTSRGERSY---DIYSRLLKDRIILLGTEIDDEIANLIVAQLLFLQAEDPDKDIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T CVG A + FLLA G KG R A+P + +
Sbjct: 61 LYINSPGGSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA+DIR A+ +++ + + + LS +TGQP+E++ +D R ++EA
Sbjct: 121 IHQPLGGVRGQAEDIRIHAEWIMKTKRQLNEILSERTGQPYERVEQDTDRDNFMSAEEAK 180
Query: 252 EYGLIDRII 260
YGLID II
Sbjct: 181 AYGLIDSII 189
>gi|352096782|ref|ZP_08957538.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
gi|351676004|gb|EHA59162.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus sp.
WH 8016]
Length = 229
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 130/215 (60%), Gaps = 2/215 (0%)
Query: 46 RVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQN 105
R H + + R P+ + G P V+ ++ G G + D+++ L RER+IF+G +
Sbjct: 5 RSHHPIENRWRGTLPVSAHTPLASPGVPTVVEQS-GRGERSF-DIYSRLLRERIIFLGTD 62
Query: 106 IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 165
++++ ++ ++A +L+L++ D K + +YIN PGG +T LAIYDTMQ + V T C G
Sbjct: 63 VNDQVADALVAQLLFLEAEDPEKDIQVYINSPGGSITAGLAIYDTMQQVAPDVVTICYGL 122
Query: 166 AYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELS 225
A + FLL+GG KG R A+P +RI + P G A+GQA DI A E+L +++ + ++
Sbjct: 123 AASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIMAQEILFLKETLNGLMA 182
Query: 226 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
TGQP KIT+D R EA+EYGLIDR++
Sbjct: 183 DHTGQPLAKITEDTERDYFLSPAEAVEYGLIDRVV 217
>gi|33862948|ref|NP_894508.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus str. MIT 9313]
gi|67460517|sp|Q7V7R2.1|CLPP3_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634865|emb|CAE20851.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
Length = 197
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+G+ + + +N+I+A ML+L++ D K +Y+YI
Sbjct: 4 IVIEESGRGERAF-DIYSRLLRERIIFLGEPVTSDSANRIVAQMLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V L I+DTMQ +K V T CVG A + FLL G G RS++ SRI +
Sbjct: 63 NSPGGSVYDGLGIFDTMQHVKPDVQTVCVGLAASMGAFLLCAGAMGKRSSLQHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DIR +ADE+L ++D + + L+ +TGQP E+I +D R EA+ YG
Sbjct: 123 PLGGARGQASDIRIQADEILFLKDRLNRVLADRTGQPLERIQEDTDRDFFMSPAEAVGYG 182
Query: 255 LIDRII 260
L+D +I
Sbjct: 183 LVDSVI 188
>gi|424865494|ref|ZP_18289359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86B]
gi|400758762|gb|EJP72964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [SAR86 cluster
bacterium SAR86B]
Length = 204
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/196 (42%), Positives = 125/196 (63%), Gaps = 4/196 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +TP GE S+ D+++ L +ERVIF+ ID+ SN ++A +L+L+S + K +
Sbjct: 10 PMVIEQTPRGERSF---DIYSRLLKERVIFLTGPIDDHISNLVVAQLLFLESENPEKDIS 66
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG ++ LAIYDTMQ + S V T C+G A + LLAGG+KG R A+P SR+
Sbjct: 67 IYINSPGGSISAGLAIYDTMQFISSSVSTMCIGQAASMGALLLAGGDKGKRFALPNSRVM 126
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA D A E+L ++ + + L++ TGQ +KI KD R ++EA+
Sbjct: 127 IHQPLGGFQGQASDFEIHAKEILYMKKIVNEILAKHTGQTVKKIEKDTDRDNFLNAEEAV 186
Query: 252 EYGLIDRIIRPPRIKE 267
+YGL+D+II IK+
Sbjct: 187 KYGLVDKIIDKRDIKD 202
>gi|427724133|ref|YP_007071410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427355853|gb|AFY38576.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 199
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 122/188 (64%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ + G G + D+++ L RER++F+GQ +++E +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ESSGRGERAF-DIYSRLLRERIVFLGQQVNDEIANLIVAQLLFLEADDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + I+DTM ++ V T C+G A + FLL+ GEKG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGIFDTMNQVRPDVCTICIGLAASMGAFLLSAGEKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ TGQP +KI D R + EA++
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGKLNQHLADHTGQPLDKIEVDTDRDFFMSAAEAMD 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|333372559|ref|ZP_08464484.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
gi|332972924|gb|EGK10866.1| ATP-dependent Clp protease, protease subunit [Desmospora sp. 8437]
Length = 206
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IF+G I++ +N I+A ML+L + D +K +
Sbjct: 17 PYVVEQTSRGERSY---DIYSRLLKDRIIFLGSEINDAVANTIVAQMLFLQTEDPNKDIQ 73
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG ++ AIYDTMQ +K + T C+G A + FLL+ G KG R A+P S +
Sbjct: 74 LYINSPGGSISAGFAIYDTMQHVKCDIQTICIGMAASMGAFLLSSGTKGKRLALPNSEVM 133
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A +LR+RD + + LS +TGQP +KI +D R +++A
Sbjct: 134 IHQPLGGAQGQASDIEISAKRILRMRDRLNQLLSDQTGQPLKKIQQDTDRDHFMSAEDAK 193
Query: 252 EYGLIDRIIRPPR 264
+YGLID+II +
Sbjct: 194 KYGLIDKIIEHQK 206
>gi|325126890|ref|YP_004286127.1| clp protease proteolytic subunit [Fragaria vesca subsp. vesca]
gi|408830270|ref|YP_006883288.1| clp protease proteolytic subunit (chloroplast) [Fragaria vesca
subsp. bracteata]
gi|428697225|ref|YP_007025408.1| clp protease proteolytic subunit (chloroplast) [Fragaria
chiloensis]
gi|428697311|ref|YP_007025493.1| clp protease proteolytic subunit (chloroplast) [Fragaria
virginiana]
gi|324022802|gb|ADY15376.1| clp protease proteolytic subunit [Fragaria vesca subsp. vesca]
gi|357198764|gb|AET62680.1| clp protease proteolytic subunit (chloroplast) [Fragaria
chiloensis]
gi|357198850|gb|AET62765.1| clp protease proteolytic subunit (chloroplast) [Fragaria
virginiana]
gi|378554732|gb|AFC17667.1| clp protease proteolytic subunit (chloroplast) [Fragaria vesca
subsp. bracteata]
gi|407080506|gb|AFS89576.1| clp protease proteolytic subunit (chloroplast) [Fragaria
chiloensis]
Length = 196
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 125/194 (64%), Gaps = 3/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG P+V +R+PGE W+D+ N LYRER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPRVPFRSPGEEDAVWIDV-NRLYRERLLFLGQGVDNEISNQLIGLMVYLSIEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ + T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDIQTVCMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+ R+ + PA + Q + EA+ELL++R+ I + +++TG+P +++D+ R
Sbjct: 120 ARRVMIHQPASSFYEAQTGEFVLEAEELLKLRETITRVYAQRTGKPLWVVSEDMERDVFM 179
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 SATEAQAHGIVDLV 193
>gi|334361975|ref|YP_004563892.1| clp protease proteolytic subunit [Nelumbo lutea]
gi|224474160|gb|ACN49349.1| clp protease proteolytic subunit [Nelumbo lutea]
gi|383286916|gb|AFH01565.1| clp protease proteolytic subunit (chloroplast) [Nelumbo lutea]
Length = 202
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 123/194 (63%), Gaps = 3/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLHRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+LAGGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFILAGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+ R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 AWRVMIHQPASSFYEAQTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFM 179
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 SATEAQAHGIVDLV 193
>gi|311069969|ref|YP_003974892.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|398308397|ref|ZP_10511871.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mojavensis
RO-H-1]
gi|419821657|ref|ZP_14345250.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
gi|310870486|gb|ADP33961.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
1942]
gi|388474293|gb|EIM11023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus atrophaeus
C89]
Length = 198
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EA+
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSAEEAM 181
Query: 252 EYGLIDRII 260
EYGLID+++
Sbjct: 182 EYGLIDKVL 190
>gi|443267332|ref|YP_007375068.1| clp protease proteolytic subunit [Quercus rubra]
gi|441421947|gb|AGC31271.1| clp protease proteolytic subunit [Quercus rubra]
Length = 196
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 122/194 (62%), Gaps = 3/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYR R++F+GQ +D + SNQI+ M+YL DDS
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDI-NRLYRARLLFLGQEVDSDLSNQIIGLMVYLSLEDDS 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASIGSFLLVGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+ R+ + PA + A + EA+E++++R+ I + ++TG P +++D+ R
Sbjct: 120 ARRVMIHQPASSFYEAPAGEFILEAEEMMKLRETITRVYVQRTGTPLWVVSEDMERDVFM 179
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 SATEAQAHGIVDHV 193
>gi|317050717|ref|YP_004111833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
gi|316945801|gb|ADU65277.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfurispirillum indicum S5]
Length = 196
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R++F+G ID++ SN I+A +L+L++ D
Sbjct: 1 MPL-VPIVVEQTARGERSY---DIYSRLLKDRIVFLGTQIDDQISNVIIAQLLFLEAEDP 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG VT +AIYDTMQ ++ V T CVG A + LLA GEKG R A+P
Sbjct: 57 EKDIFLYINSPGGVVTAGMAIYDTMQYIRPKVSTICVGQAASMGAVLLAAGEKGKRFALP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+GQA DI +A E+LR+++ + L R TG EKI +D R
Sbjct: 117 HSRIMIHQPLGGAQGQATDIEIQAREILRIKEMLNDILVRHTGADLEKIQRDTDRDFFMT 176
Query: 247 SQEALEYGLIDRIIR 261
++A YG+ID +I+
Sbjct: 177 GEQARAYGIIDEVIQ 191
>gi|237755491|ref|ZP_04584113.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
gi|237692355|gb|EEP61341.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium yellowstonense SS-5]
Length = 201
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +TP GE ++ D+++ L ++R+I +G ID+ +N ++A +L+L+S D K +Y
Sbjct: 10 PIVIEQTPRGERAY---DIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIY 66
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT LAIYDTM +K V T C+G A + FLL+ G KG R ++P +RI
Sbjct: 67 MYINSPGGVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARIM 126
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI A E+LR++ + + L++ TGQP EKI D R ++EA
Sbjct: 127 IHQPLGGFQGQATDIEIHAKEILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAK 186
Query: 252 EYGLIDRII 260
EYGLID++I
Sbjct: 187 EYGLIDKVI 195
>gi|428202443|ref|YP_007081032.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
gi|427979875|gb|AFY77475.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pleurocapsa
sp. PCC 7327]
Length = 204
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E +N ++A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQQVTDESANLVVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L +++ + + L+ TGQP +KI +D R ++EA
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKNLLNEHLASHTGQPLDKIAEDTERDFFMSAEEAKT 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|253729580|ref|YP_003029763.1| ClpP [Bambusa oldhamii]
gi|340034474|ref|YP_004734125.1| clp protease proteolytic subunit [Bambusa emeiensis]
gi|345895242|ref|YP_004841973.1| clp protease proteolytic subunit [Panicum virgatum]
gi|246367090|gb|ACS94701.1| ClpP [Bambusa oldhamii]
gi|307697231|gb|ADN86070.1| clp protease proteolytic subunit [Chasmanthium latifolium]
gi|309321977|gb|ADO65498.1| clp protease proteolytic subunit [Bambusa emeiensis]
gi|319412344|gb|ADV41880.1| clp protease proteolytic subunit (chloroplast) [Panicum virgatum]
gi|319412430|gb|ADV41965.1| clp protease proteolytic subunit (chloroplast) [Panicum virgatum]
gi|337730834|gb|AEI70761.1| clp protease proteolytic subunit [Puelia olyriformis]
gi|374411869|gb|AEZ48919.1| clp protease proteolytic subunit, partial [Eleusine coracana]
Length = 216
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|298490862|ref|YP_003721039.1| ATP-dependent Clp protease proteolytic subunit ClpP ['Nostoc
azollae' 0708]
gi|298232780|gb|ADI63916.1| ATP-dependent Clp protease, proteolytic subunit ClpP ['Nostoc
azollae' 0708]
Length = 201
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +YMYI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDSGLANLIVAQLLFLDAEDPEKDIYMYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM++++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKNIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + L++ TGQP E+I +D R +EA EYG
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKRKLNGYLAQHTGQPLERIAEDTERDFFMSPEEAQEYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|452849507|ref|YP_007475164.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Arundinaria gigantea]
gi|441480275|gb|AGC38187.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Arundinaria gigantea]
Length = 216
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGMAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|427724491|ref|YP_007071768.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
gi|427356211|gb|AFY38934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7376]
Length = 218
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 113/174 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L RER+IF+G ID+ ++ I+A +L+LD+ D K + +Y+N PGG V +AIY
Sbjct: 42 DLYSRLLRERIIFLGSAIDDTVADSIVAQLLFLDAEDAEKDIQIYVNSPGGSVYAGMAIY 101
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P SR+ + P G A+GQA DI
Sbjct: 102 DTMQQIRPDVVTICYGIAASMGAFLLSGGTKGKRMALPSSRVMIHQPLGGAQGQAVDIEI 161
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
+A E+L +++ + ++ TGQ F+K+ +D R ++EA YGLID++I P
Sbjct: 162 QAKEILYIKEKLNSLIADHTGQAFDKVAEDTERDFYMSAEEACAYGLIDKVITP 215
>gi|33864600|ref|NP_896159.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
gi|67460511|sp|Q7UA36.1|CLPP1_SYNPX RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33632123|emb|CAE06579.1| ATP-dependent Clp protease proteolytic subunit 2 [Synechococcus sp.
WH 8102]
Length = 224
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 86/209 (41%), Positives = 127/209 (60%), Gaps = 5/209 (2%)
Query: 56 RNDKPIRGRI-AMMPIGTP---KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
R+ PI+ R A MPI P + G G + D+++ L RER+IF+G +D+ +
Sbjct: 5 RSHHPIQNRWRAEMPISAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVA 63
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
+ ++A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A +
Sbjct: 64 DALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGA 123
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 231
FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + ++ TGQP
Sbjct: 124 FLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLMADHTGQP 183
Query: 232 FEKITKDLSRIKRFGSQEALEYGLIDRII 260
+KI +D R EA++YGLIDR++
Sbjct: 184 LDKIAEDTDRDYFLSPAEAVQYGLIDRVV 212
>gi|404493314|ref|YP_006717420.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
gi|90183182|sp|Q3A3X5.1|CLPP_PELCD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|77545370|gb|ABA88932.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Pelobacter
carbinolicus DSM 2380]
Length = 194
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 122/189 (64%), Gaps = 2/189 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R+IF+G +D++ +N I+A ML+L+S D K +++
Sbjct: 5 PMVVEQT-GRGERAY-DIFSRLLKDRIIFLGGAVDDQVANLIIAQMLFLESEDPEKEIFL 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT +AIYDTMQ ++ PV T CVG A + LLA G +G R A+P +RI +
Sbjct: 63 YINSPGGVVTAGMAIYDTMQYVRCPVSTLCVGQAASMGAVLLAAGGEGKRFALPHARIMI 122
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G +GQA DI A E+LR+R+ + L+ TGQ EKI D R GS+EA +
Sbjct: 123 HQPWGGFQGQATDINIHAQEILRLRETLNGVLASHTGQTLEKIATDTERDFFMGSEEAKK 182
Query: 253 YGLIDRIIR 261
YG++D I++
Sbjct: 183 YGIVDDIVK 191
>gi|340034050|ref|YP_004733602.1| clp protease proteolytic subunit [Phyllostachys edulis]
gi|340034389|ref|YP_004734002.1| clp protease proteolytic subunit [Phyllostachys nigra var. henonis]
gi|340034560|ref|YP_004734209.1| clp protease proteolytic subunit [Ferrocalamus rimosivaginus]
gi|374249375|ref|YP_005088557.1| clpP gene product (chloroplast) [Phyllostachys propinqua]
gi|307133910|gb|ADN32915.1| clp protease proteolytic subunit [Phyllostachys nigra var. henonis]
gi|309321725|gb|ADO65249.1| clp protease proteolytic subunit [Ferrocalamus rimosivaginus]
gi|309321892|gb|ADO65414.1| clp protease proteolytic subunit [Phyllostachys edulis]
gi|346228412|gb|AEO21285.1| clp protease proteolytic subunit (chloroplast) [Phyllostachys
propinqua]
Length = 216
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGMAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|154249786|ref|YP_001410611.1| ATP-dependent Clp protease proteolytic subunit [Fervidobacterium
nodosum Rt17-B1]
gi|154153722|gb|ABS60954.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Fervidobacterium nodosum Rt17-B1]
Length = 206
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 79/174 (45%), Positives = 113/174 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID+ +N ++A +L+L++ + K + +YIN PGG VT LAIY
Sbjct: 30 DIYSRLLKDRIIFLGSAIDDHVANLVVAQLLFLEAENPDKDIQLYINSPGGLVTAGLAIY 89
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + LLA G KG R A+P SRI + P G A G A D+
Sbjct: 90 DTMQYVKCDVATICVGQAASMGAVLLAAGAKGKRFALPNSRIMIHQPLGGAEGSAKDVEI 149
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
ELLR++ I + LS+ TGQ E+I KD R +QEA+EYG+ID++I+P
Sbjct: 150 LTKELLRIKRIINEILSKHTGQDIERIEKDTDRDFFMSAQEAMEYGIIDKVIKP 203
>gi|402815454|ref|ZP_10865046.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
gi|402506494|gb|EJW17017.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
Length = 198
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IF+G ID++ +N ++A +L+L + D K ++
Sbjct: 5 PMVIEQTNRGERSY---DIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLQADDPEKDIF 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T CVG A + LL G G R A+P S I
Sbjct: 62 LYINSPGGSVTAGMAIYDTMQHIKPDVSTICVGLAASMGSLLLTAGAPGKRIALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA DI+ AD +L+ R + + +TGQP EKI +D R + EA
Sbjct: 122 IHQPLGGVRGQASDIKIHADWILKTRHKLNQIYVERTGQPIEKIERDTDRDNFMSADEAK 181
Query: 252 EYGLIDRIIRP 262
EYGL+D+++ P
Sbjct: 182 EYGLVDQVLHP 192
>gi|419718353|ref|ZP_14245675.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnoanaerobaculum saburreum F0468]
gi|383305484|gb|EIC96847.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnoanaerobaculum saburreum F0468]
Length = 193
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 125/191 (65%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ T GE ++ D+++ L ++R+IF+G+ +++ ++ ++A +L+L+S D +K +
Sbjct: 4 VPTVIESTSRGERAF---DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V +AIYDTMQ +K V T C+G A +A FLLAGG KG R A+P + I
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMAAFLLAGGTKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA +IR A+++L+ R+ + K L+ T QP E I +D R ++EA
Sbjct: 121 MIHQPSGGAQGQATEIRIAAEQILKTREKMNKILAENTNQPIEVIERDTERDNYMSAKEA 180
Query: 251 LEYGLIDRIIR 261
L YG+ID++I
Sbjct: 181 LSYGIIDKVIE 191
>gi|374249291|ref|YP_005088034.1| clpP gene product [Leersia tisserantii]
gi|346228328|gb|AEO21202.1| clp protease proteolytic subunit [Leersia tisserantii]
Length = 216
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRSEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPR 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ + + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMVTRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|116256435|sp|Q3ANI8.2|CLPP1_SYNSC RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
Length = 207
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/196 (41%), Positives = 121/196 (61%), Gaps = 4/196 (2%)
Query: 68 MPIGTP---KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
MP+ P + G G + D+++ L RER+IF+G +D+ ++ ++A ML+L++
Sbjct: 1 MPVSAPGPLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGVDDAVADALVAQMLFLEAE 59
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K + +YIN PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R A
Sbjct: 60 DPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLA 119
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P +RI + P G A+GQA DI +A E+L +++ + ++ TGQP +KI++D R
Sbjct: 120 LPNARIMIHQPLGGAQGQAVDIEIQAKEILYLKETLNGLMAEHTGQPLDKISEDTDRDYF 179
Query: 245 FGSQEALEYGLIDRII 260
EA+EYGLIDR++
Sbjct: 180 LSPAEAVEYGLIDRVV 195
>gi|159106888|ref|YP_001531306.1| clpP gene product (chloroplast) [Lolium perenne]
gi|427436999|ref|YP_007026491.1| clp protease proteolytic subunit [Festuca altissima]
gi|427437096|ref|YP_007026663.1| clp protease proteolytic subunit [Festuca pratensis]
gi|427437242|ref|YP_007026749.1| clp protease proteolytic subunit [Lolium multiflorum]
gi|158934422|emb|CAO86000.1| clp protease proteolytic subunit (chloroplast) [Lolium perenne]
gi|410177790|gb|AFV62671.1| clp protease proteolytic subunit [Festuca altissima]
gi|410177964|gb|AFV62843.1| clp protease proteolytic subunit [Festuca pratensis]
gi|410178051|gb|AFV62929.1| clp protease proteolytic subunit [Lolium multiflorum]
Length = 216
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|227452690|gb|ACP34131.1| ATP-dependent protease subunit [Larix gmelinii]
Length = 196
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 116/191 (60%), Gaps = 1/191 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + I+D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGIFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA G A D NE+ + +RDYI K +TG P E I + L+R
Sbjct: 121 ARVMIHQPASTYYDGPAADFHNESKHVTMLRDYITKCYIERTGTPGEVIQRGLNRDVFMS 180
Query: 247 SQEALEYGLID 257
+ EA YG+++
Sbjct: 181 ATEAQAYGIVE 191
>gi|350566316|ref|ZP_08935001.1| ATP-dependent Clp protease, protease subunit [Peptoniphilus
indolicus ATCC 29427]
gi|348662942|gb|EGY79570.1| ATP-dependent Clp protease, protease subunit [Peptoniphilus
indolicus ATCC 29427]
Length = 194
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 125/190 (65%), Gaps = 2/190 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L +ER+IF+ I+++ ++ ++A +L+L++ D++K +
Sbjct: 4 VPMVVEQT-GRGERSY-DIYSRLLKERIIFLTGEINDQVADLVVAQLLFLEAEDNTKDIQ 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ AIYDTMQ +K V T C+G A + FLL G KG R A+P + I
Sbjct: 62 IYINSPGGSVSAGFAIYDTMQYIKCDVSTICMGMAASMGAFLLIAGTKGKRFALPNADIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI+ +A+++L+VR+ + K LS +TGQP +KI D R + EAL
Sbjct: 122 IHQPLGGAQGQATDIKIQAEKILKVRERLNKILSERTGQPLDKIELDTDRDYYLTADEAL 181
Query: 252 EYGLIDRIIR 261
EYG+ID++I
Sbjct: 182 EYGIIDKVIE 191
>gi|50233996|ref|YP_052774.1| ATP-dependent Clp protease proteolytic subunit [Oryza nivara]
gi|109156611|ref|YP_654230.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa Indica
Group]
gi|378758438|ref|YP_005296442.1| clpP gene product (chloroplast) [Oryza meridionalis]
gi|386799194|ref|YP_006280783.1| clpP gene product (chloroplast) [Oryza rufipogon]
gi|68052132|sp|Q6ENE9.1|CLPP_ORYNI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148841130|sp|P0C312.1|CLPP_ORYSA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148841131|sp|P0C313.1|CLPP_ORYSI RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|148841132|sp|P0C314.1|CLPP_ORYSJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|42795503|gb|AAS46070.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa Indica
Group]
gi|42795570|gb|AAS46136.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa
Japonica Group]
gi|42795634|gb|AAS46199.1| ATP-dependent Clp protease proteolytic subunit [Oryza sativa
Japonica Group]
gi|49615020|dbj|BAD26803.1| ATP-dependent Clp protease proteolytic subunit [Oryza nivara]
gi|290790590|gb|ADD62850.1| clp protease proteolytic subunit [Oryza sativa Japonica Group]
gi|290790659|gb|ADD62918.1| clp protease proteolytic subunit [Oryza meridionalis]
gi|290790728|gb|ADD62986.1| clp protease proteolytic subunit [Oryza australiensis]
gi|336326862|gb|AEI53040.1| clp protease proteolytic subunit (chloroplast) [Oryza meridionalis]
gi|336326938|gb|AEI53115.1| clp protease proteolytic subunit (chloroplast) [Oryza rufipogon]
gi|336327016|gb|AEI53192.1| clp protease proteolytic subunit (chloroplast) [Oryza rufipogon]
gi|353685078|gb|AER12843.1| clp protease proteolytic subunit (chloroplast) [Oryza sativa Indica
Group]
gi|353685166|gb|AER12930.1| clp protease proteolytic subunit (chloroplast) [Oryza sativa Indica
Group]
Length = 216
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|169794098|ref|YP_001718462.1| ATP-dependent Clp protease proteolytic subunit [Manihot esculenta]
gi|157695910|gb|ABV66179.1| clp protease proteolytic subunit [Manihot esculenta]
Length = 195
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 124/193 (64%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE W+D+ N LYRER++F+GQ++D E +NQ++ M+YL + +
Sbjct: 1 MPIGVPKVPFRNPGEDDSTWIDI-NRLYRERLLFLGQDVDSEIANQLIGLMVYLSIENAT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GG+ R A P
Sbjct: 60 KDLYLFINSPGGWVIPGIAIYDTMQFVRPDVQTVCMGLAASMGSFILVGGKITKRLAFPH 119
Query: 188 SRIALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P +G Q + EA+ELL++R+ + + +++TG+P +++D+ R
Sbjct: 120 ARVMIHQPISGYYEAQIVEFVLEAEELLKLREILTRIYAQRTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|381158611|ref|ZP_09867844.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thiorhodovibrio sp. 970]
gi|380879969|gb|EIC22060.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thiorhodovibrio sp. 970]
Length = 232
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 88/206 (42%), Positives = 125/206 (60%), Gaps = 8/206 (3%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ +D+ +N ++A ML+L+S + K +
Sbjct: 31 VPIVVEQTARGERSF---DIFSRLLKERVIFLVGPVDDHTANLVVAQMLFLESENPDKDI 87
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+ YIN PGG VT LAIYDTM ++ V T CVG A + LLAGG G R +P SR+
Sbjct: 88 HFYINSPGGSVTAGLAIYDTMCFIRPDVSTMCVGQAASMGALLLAGGTAGKRFCLPHSRM 147
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L++R+ + + S TGQP EKI D R + G +EA
Sbjct: 148 MIHQPLGGFQGQASDIDIHAREILKIREQLNRIFSHHTGQPIEKIADDTERDRFLGGEEA 207
Query: 251 LEYGLIDRIIRPPRIKEDMPRKDAGT 276
++YGLID++I K DMP K T
Sbjct: 208 VDYGLIDKVID----KRDMPDKKTDT 229
>gi|322418659|ref|YP_004197882.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
gi|320125046|gb|ADW12606.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M18]
Length = 199
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 122/189 (64%), Gaps = 2/189 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID+ +N ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K+PV T C+G A + FLL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMRYIKAPVSTICIGQAASMGAFLLSGGEKGKRFSLANSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI A E+LR++D + + L+ TGQ FEK+ D R +EA
Sbjct: 121 IHQPLGGFQGQATDIHIHAKEILRMKDQLNELLAEHTGQSFEKVAADTERDYFMSGEEAK 180
Query: 252 EYGLIDRII 260
YG+ID I+
Sbjct: 181 SYGIIDAIV 189
>gi|339007540|ref|ZP_08640114.1| ATP-dependent Clp protease proteolytic subunit 2 [Brevibacillus
laterosporus LMG 15441]
gi|421870979|ref|ZP_16302601.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
gi|338774743|gb|EGP34272.1| ATP-dependent Clp protease proteolytic subunit 2 [Brevibacillus
laterosporus LMG 15441]
gi|372459606|emb|CCF12150.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
Length = 192
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G ID+E +N ++A +L+L+S + K +
Sbjct: 4 PMVVEQTNRGERAY---DIYSRLLKDRIIFLGSEIDDEIANAVVAQLLFLESEEPGKDIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +KS V T C+G A + LLA G KG R A+P S +
Sbjct: 61 LYINSPGGSVTAGMAIYDTMQFIKSDVSTICIGMAASMGAVLLAAGAKGKRFALPNSEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA+DIR AD +++ + + + L+ +TGQP+E I +D R ++EA
Sbjct: 121 IHQPLGGVRGQAEDIRIHADWIIKTKRQLNEILAERTGQPYEVIDRDTDRDNFMSAEEAK 180
Query: 252 EYGLIDRII 260
YGLID +I
Sbjct: 181 NYGLIDSVI 189
>gi|290790864|gb|ADD63120.1| clp protease proteolytic subunit [Microlaena stipoides]
Length = 216
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRGEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|255961406|ref|YP_003097599.1| Clp protease proteolytic subunit [Dendrocalamus latiflorus]
gi|255040283|gb|ACT99943.1| Clp protease proteolytic subunit [Dendrocalamus latiflorus]
Length = 216
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFFLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|254525962|ref|ZP_05138014.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
gi|221537386|gb|EEE39839.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Prochlorococcus marinus str. MIT 9202]
Length = 214
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 2/191 (1%)
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ G G + D+++ L RER+IF+G I+++ S+ ++A +L+L++ D K +
Sbjct: 25 AVPTVIEQS-GRGERAF-DIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDI 82
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AIYDTMQ + V T C G A + FLL+GG KG R A+P SRI
Sbjct: 83 QIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 142
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA +I +A E+L ++ + L+ TGQP EKI +D R EA
Sbjct: 143 MIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEA 202
Query: 251 LEYGLIDRIIR 261
+EYGLID++I+
Sbjct: 203 VEYGLIDKVIK 213
>gi|339906475|ref|YP_004733268.1| clp protease proteolytic subunit [Indocalamus longiauritus]
gi|309321808|gb|ADO65331.1| clp protease proteolytic subunit [Indocalamus longiauritus]
Length = 216
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGMAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|124021784|ref|YP_001016091.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
gi|123962070|gb|ABM76826.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9303]
Length = 224
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/217 (39%), Positives = 126/217 (58%), Gaps = 9/217 (4%)
Query: 47 VHKSLYSGIRNDKPIRGRIAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIG 103
+ Y I N P + P+ +P +L G G + D+++ L RER+IF+G
Sbjct: 2 IDSCCYHPIHNRWP-----GIRPVSSPGILPTVVEQSGRGERAF-DIYSRLLRERIIFLG 55
Query: 104 QNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCV 163
+D++ ++ ++A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C
Sbjct: 56 TGVDDQVADALVAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICY 115
Query: 164 GFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKE 223
G A + FLL GG KG R A+P +RI + P G A+GQA DI +A E+L +++ +
Sbjct: 116 GLAASMGAFLLCGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGL 175
Query: 224 LSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
L+ TGQP KI +D R +A+EYGLIDR++
Sbjct: 176 LAEHTGQPLNKIAEDTDRDHFLSPAKAVEYGLIDRVV 212
>gi|383454037|ref|YP_005368026.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
gi|380732364|gb|AFE08366.1| ATP-dependent Clp protease proteolytic subunit [Corallococcus
coralloides DSM 2259]
Length = 206
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 126/199 (63%), Gaps = 6/199 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R++ +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANAIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K+PV T CVG A + LL G KG R ++P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKAPVSTICVGQAASMGAVLLLAGAKGKRYSLP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ARGQA DI +A E+LR++ + + + + TGQ E++ KD R G
Sbjct: 119 SSRIMIHQPLGGARGQATDIEIQAREILRMKAKLNELIVKHTGQTIERVEKDTDRDYFMG 178
Query: 247 SQEALEYGLIDRIIRPPRI 265
+ EA YG+ID I P ++
Sbjct: 179 AAEAKAYGIIDSIQDPRKV 197
>gi|319943618|ref|ZP_08017899.1| ATP-dependent Clp protease proteolytic subunit [Lautropia mirabilis
ATCC 51599]
gi|319742851|gb|EFV95257.1| ATP-dependent Clp protease proteolytic subunit [Lautropia mirabilis
ATCC 51599]
Length = 262
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 83/207 (40%), Positives = 126/207 (60%), Gaps = 3/207 (1%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L RERV+F+ + ++ +N +A MLYL+S + K
Sbjct: 58 LGMVPIVIEQSGRGERAY-DIYSRLLRERVVFLVGPVMDQSANLAVAQMLYLESENPDKD 116
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
++ YIN PGG V+ L I+DTMQ +K V T C+GFA + FLLA G KG R ++P SR
Sbjct: 117 IHFYINSPGGSVSAGLGIFDTMQFVKPDVSTLCIGFAASMGAFLLAAGAKGKRHSLPNSR 176
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P+G A+GQA DI A E++ +R + + L+ +TGQP E+I +D R + E
Sbjct: 177 IMIHQPSGGAQGQASDIEIHAKEIIYLRKRLNQILADRTGQPLERIERDTERDNFMSADE 236
Query: 250 ALEYGLIDRIIRPPRIKEDMPRKDAGT 276
ALEYGLID+++ E + DAG+
Sbjct: 237 ALEYGLIDKVMTSR--TEATAKADAGS 261
>gi|443327406|ref|ZP_21056031.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
gi|442792934|gb|ELS02396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Xenococcus
sp. PCC 7305]
Length = 201
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 9/200 (4%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ + G G + D+++ L RER++F+GQ + +E SN ++A +LYL++ D K +Y+
Sbjct: 3 PTVI-ESSGRGDRAF-DIYSRLLRERIVFLGQQVTDEISNLVVAQLLYLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + ++DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGMFDTMNQVRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L +++ + + L+ TGQP I +D R S+EA E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKNKLNQHLADHTGQPLSTIEEDTERDFFMSSEEAKE 180
Query: 253 YGLIDRII-------RPPRI 265
YGLID++I PP I
Sbjct: 181 YGLIDQVITRKPSATNPPEI 200
>gi|69214839|gb|AAZ03802.1| ATP-depedent Clp protease proteolytic subunit [Ranunculus
macranthus]
Length = 195
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDV-NRLHRERLLFLGQGVDSEISNQLIGLMVYLSLEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++++IN PGG V P +AIYDTMQ + V T C+G A + FLL GGE R A P
Sbjct: 60 RDLFLFINSPGGWVVPGVAIYDTMQFVPPDVHTICMGLAASMGSFLLVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDFV 192
>gi|374411908|gb|AEZ48938.1| clp protease proteolytic subunit, partial [Ravenea hildebrandtii]
Length = 211
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/207 (39%), Positives = 124/207 (59%), Gaps = 15/207 (7%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLW--------------NALYRERVIFIGQNIDEEFSNQ 113
MPIG PKV +R+PGE WVD++ N L+RER++F+GQ +D E SNQ
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVFFEPYAPKGTYFVLINRLHRERLLFLGQEVDSEISNQ 60
Query: 114 ILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFL 173
++ M+YL DD++ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+
Sbjct: 61 LVGLMVYLSIEDDTRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASMGSFI 120
Query: 174 LAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPF 232
L GGE R A P +R+ + PA + QA + EA+ELL++R+ + K ++TG P
Sbjct: 121 LVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRTGNPL 180
Query: 233 EKITKDLSRIKRFGSQEALEYGLIDRI 259
+++D+ R + EA +G++D +
Sbjct: 181 WVVSEDMERDVFMSATEAQVHGIVDLV 207
>gi|157414262|ref|YP_001485128.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
gi|157388837|gb|ABV51542.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9215]
Length = 214
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 2/191 (1%)
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ G G + D+++ L RER+IF+G I+++ S+ ++A +L+L++ D K +
Sbjct: 25 AVPTVIEQS-GRGERAF-DIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDI 82
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AIYDTMQ + V T C G A + FLL+GG KG R A+P SRI
Sbjct: 83 QIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 142
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA +I +A E+L ++ + L+ TGQP EKI +D R EA
Sbjct: 143 MIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEA 202
Query: 251 LEYGLIDRIIR 261
+EYGLID++I+
Sbjct: 203 VEYGLIDKVIK 213
>gi|123969397|ref|YP_001010255.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126697184|ref|YP_001092070.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
gi|123199507|gb|ABM71148.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
AS9601]
gi|126544227|gb|ABO18469.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9301]
Length = 214
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 2/191 (1%)
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ G G + D+++ L RER+IF+G I+++ S+ ++A +L+L++ D K +
Sbjct: 25 AVPTVIEQS-GRGERAF-DIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPEKDI 82
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AIYDTMQ + V T C G A + FLL+GG KG R A+P SRI
Sbjct: 83 QIYINSPGGSVTAGMAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 142
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA +I +A E+L ++ + L+ TGQP EKI +D R EA
Sbjct: 143 MIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAEHTGQPLEKINEDTERDYFLSPSEA 202
Query: 251 LEYGLIDRIIR 261
+EYGLID++I+
Sbjct: 203 VEYGLIDKVIK 213
>gi|346578216|ref|YP_004841808.1| clp protease proteolytic subunit [Cucumis melo subsp. melo]
gi|344030516|gb|AEM76917.1| clp protease proteolytic subunit [Cucumis melo subsp. melo]
Length = 196
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 121/194 (62%), Gaps = 3/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDI-NRLYRERLLFLGQEVDSEISNQLIGLMVYLSMENDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V L IYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 60 KDLYLFINSPGGGVISGLGIYDTMQFVQPHVQTVCMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+ R+ + PA + Q + EA ELLR+R+ + + ++TG+P I++D+ R
Sbjct: 120 ARRVMIHQPASSFYEAQTGEFILEAKELLRLREILTRVYVQRTGKPLWVISEDMERDVFM 179
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 SATEAQAHGIVDLV 193
>gi|313680148|ref|YP_004057887.1| ATP-dependent clp protease proteolytic subunit clpp [Oceanithermus
profundus DSM 14977]
gi|313152863|gb|ADR36714.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oceanithermus
profundus DSM 14977]
Length = 194
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 116/172 (67%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID + +N I+A ML+L++ + ++ + +YIN PGGDV LAIY
Sbjct: 18 DIYSRLLKDRIIFLGTPIDSQVANTIVAQMLFLEAQNPNQEIKLYINSPGGDVYAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +KSPV T VG A + FLLA GE G R A+P +R+ + P G A+GQA DI
Sbjct: 78 DTMQYVKSPVATIVVGMAASMGAFLLAAGEAGQRYALPHARVMIHQPWGGAQGQATDIAI 137
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A+++L+ + + + L++ TGQP EK+ D R + EA +YGL+DR+I
Sbjct: 138 QAEQILKSKKLLNELLAKHTGQPVEKVEADSDRDFWMTADEARDYGLVDRVI 189
>gi|78357263|ref|YP_388712.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
alaskensis G20]
gi|90101407|sp|Q30Z79.1|CLPP_DESDG RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|78219668|gb|ABB39017.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
alaskensis G20]
Length = 200
Score = 160 bits (404), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 85/193 (44%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPI P V+ T G + D+++ L ++R+I +G +D+ ++ I A +L+L+S +
Sbjct: 1 MPI--PMVIEST-GRAERAY-DIYSRLLKDRIILLGTPVDDNVASLICAQLLFLESENPE 56
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT LAIYDTMQ + +PV T C+G A + FLLA G+ G R A+P
Sbjct: 57 KEIYLYINSPGGVVTAGLAIYDTMQYISAPVATLCMGQAASMGAFLLAAGQPGMRFALPN 116
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G A+GQA DI +A E+LR++D + + LSR TGQP EKI + R G
Sbjct: 117 SRIMIHQPMGGAQGQATDIDIQAREILRLKDRLNEILSRHTGQPLEKIVEHTDRDYFMGP 176
Query: 248 QEALEYGLIDRII 260
+ A +G+IDRI+
Sbjct: 177 ENAKNFGIIDRIL 189
>gi|119512812|ref|ZP_01631880.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
gi|119462534|gb|EAW43503.1| Peptidase S14, ClpP [Nodularia spumigena CCY9414]
Length = 232
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/195 (41%), Positives = 118/195 (60%), Gaps = 6/195 (3%)
Query: 66 AMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
M+PI + G G + D+++ L RER+IF+GQ +D E +N I+A +L+LDS D
Sbjct: 29 CMIPI-----VVEQSGRGERAF-DIYSRLLRERIIFLGQQVDNEIANLIVAQLLFLDSED 82
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K +Y+YIN PGG V + I+DTM+ ++ V T C G + FLL+ G KG R ++
Sbjct: 83 SEKDIYLYINSPGGSVMAGMGIFDTMKHIRPDVCTICTGLGASMGAFLLSAGAKGKRMSL 142
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
P SRI + P G A+GQA DI +A E+L + + + L+ TGQP E+I +D R
Sbjct: 143 PHSRIMIHQPLGGAQGQATDIEIQAREILYHKQRLNEYLAEHTGQPIERIAEDTERDFFM 202
Query: 246 GSQEALEYGLIDRII 260
+EA EYGLID++I
Sbjct: 203 SPEEAKEYGLIDQVI 217
>gi|20807119|ref|NP_622290.1| ATP-dependent Clp protease proteolytic subunit [Thermoanaerobacter
tengcongensis MB4]
gi|20515613|gb|AAM23894.1| Protease subunit of ATP-dependent Clp proteases [Thermoanaerobacter
tengcongensis MB4]
Length = 198
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 114/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G I++ ++ ++A ML+L++ D K +++YIN PGG +T LAIY
Sbjct: 22 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPGGSITAGLAIY 81
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A FLLA G KG R A+P S I + P G +GQA DI+
Sbjct: 82 DTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGMQGQATDIKI 141
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A+ LLR+RD + + LS TGQP EKI D+ R ++EA YG+ID I+
Sbjct: 142 HAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEAKTYGIIDDIL 193
>gi|154687585|ref|YP_001422746.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens FZB42]
gi|308175199|ref|YP_003921904.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|375363903|ref|YP_005131942.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|384161083|ref|YP_005543156.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|384165974|ref|YP_005547353.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|384170169|ref|YP_005551547.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|384266990|ref|YP_005422697.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385266358|ref|ZP_10044445.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387900080|ref|YP_006330376.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|394991001|ref|ZP_10383811.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|421730139|ref|ZP_16169268.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429506759|ref|YP_007187943.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|451345383|ref|YP_007444014.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452857085|ref|YP_007498768.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|166201799|sp|A7Z939.1|CLPP_BACA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|154353436|gb|ABS75515.1| ClpP [Bacillus amyloliquefaciens FZB42]
gi|307608063|emb|CBI44434.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens DSM 7]
gi|328555171|gb|AEB25663.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens TA208]
gi|328913529|gb|AEB65125.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens LL3]
gi|341829448|gb|AEK90699.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens XH7]
gi|371569897|emb|CCF06747.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum CAU B946]
gi|380500343|emb|CCG51381.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum YAU B9601-Y2]
gi|385150854|gb|EIF14791.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 5B6]
gi|387174190|gb|AFJ63651.1| ATP-dependent Clp protease, protease subunit [Bacillus
amyloliquefaciens Y2]
gi|393808148|gb|EJD69457.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. 916]
gi|407076105|gb|EKE49089.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum M27]
gi|429488349|gb|AFZ92273.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum AS43.3]
gi|449849141|gb|AGF26133.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens IT-45]
gi|452081345|emb|CCP23112.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 198
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R + EAL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILLLRDKLNKVLAERTGQPLEVIERDTDRDNFKSADEAL 181
Query: 252 EYGLIDRII 260
EYGLID+++
Sbjct: 182 EYGLIDKVL 190
>gi|392407107|ref|YP_006443715.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
gi|390620243|gb|AFM21390.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Anaerobaculum
mobile DSM 13181]
Length = 192
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G I++ +N ++A ML+L+S D K +
Sbjct: 3 VPIVIEQT-GRGERAY-DIYSRLLKDRIIFLGDVIEDHIANLVVAQMLFLESEDPDKDIN 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT L IYDTMQ +K P+ T CVG A +A LLA G KG R A+P SR+
Sbjct: 61 LYINSPGGSVTAGLGIYDTMQYIKCPISTICVGQAASMAAVLLAAGTKGKRIALPNSRVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
L P G +GQA DI A E+ ++RD + + +++ T Q EK+ +D R ++EAL
Sbjct: 121 LHQPLGGVQGQATDIEIHAKEIKKIRDRLNEIIAKHTNQDIEKVARDTDRDFFMSAEEAL 180
Query: 252 EYGLIDRII 260
YG++D++I
Sbjct: 181 SYGIVDKVI 189
>gi|60416366|sp|Q8RC25.2|CLPP_THETN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 195
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/172 (45%), Positives = 114/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G I++ ++ ++A ML+L++ D K +++YIN PGG +T LAIY
Sbjct: 19 DIFSRLLKDRIVFLGDEINDTTASLVIAQMLFLEAEDPDKDIWLYINSPGGSITAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A +A FLLA G KG R A+P S I + P G +GQA DI+
Sbjct: 79 DTMQYIKPDVVTLCVGMAASMAAFLLAAGAKGKRFALPNSEIMIHQPWGGMQGQATDIKI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A+ LLR+RD + + LS TGQP EKI D+ R ++EA YG+ID I+
Sbjct: 139 HAERLLRLRDKLERILSENTGQPLEKIKADMERDYFMTAEEAKTYGIIDDIL 190
>gi|150020876|ref|YP_001306230.1| ATP-dependent Clp protease proteolytic subunit [Thermosipho
melanesiensis BI429]
gi|149793397|gb|ABR30845.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosipho
melanesiensis BI429]
Length = 202
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/174 (44%), Positives = 114/174 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++F+G ID+ +N I+A +L+L++ D K + +YIN PGG V+ LAIY
Sbjct: 24 DIYSRLLKDRIVFLGSAIDDHVANLIVAQLLFLEAEDPDKDIQLYINSPGGSVSAGLAIY 83
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LLAGG KG R ++P SRI + P G A G A D+
Sbjct: 84 DTMQYVKCDVTTICIGQAASMGAVLLAGGTKGKRFSLPNSRIMIHQPLGGAEGPAKDVEI 143
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRP 262
ELLR+++ I + LS TGQP E+I +D R ++ALEYGLID++I+P
Sbjct: 144 MTKELLRIKNKINEILSLHTGQPIERIERDTDRDFFMTPEDALEYGLIDKVIKP 197
>gi|428780533|ref|YP_007172319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
gi|428694812|gb|AFZ50962.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Dactylococcopsis salina PCC 8305]
Length = 217
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 113/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L RER++F+GQ +D++ ++ I A ML+L++ D K + +YIN PGG V +AIY
Sbjct: 36 DLYSRLLRERIVFLGQQVDDQIADSIAAQMLFLEAEDPEKDIQLYINSPGGSVYAGMAIY 95
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLAGG +G R ++P SRI + P G A+GQA DI
Sbjct: 96 DTMQQIQPDVATICYGIAASMGAFLLAGGAEGKRMSLPNSRIMIHQPLGGAQGQAADIEI 155
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L +++ + + L+ T QP E+IT+D R + EA +YGLID +I
Sbjct: 156 QAREILYIKNTLNELLAHHTKQPLERITEDTERDFYMSATEAKDYGLIDEMI 207
>gi|33151467|ref|NP_872820.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus ducreyi
35000HP]
gi|60389738|sp|Q7VP78.1|CLPP_HAEDU RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|33147687|gb|AAP95209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
ducreyi 35000HP]
Length = 197
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 123/189 (65%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+ +++ +N I+A +L+L++ D K +Y
Sbjct: 5 PMVVEQTSKGERSY---DIYSRLLKERIIFLNGEVEDHMANLIVAQLLFLEAEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTM +K V T C G A + FLL+GG+KG R A+P +R+
Sbjct: 62 LYINSPGGVVTAGLAIYDTMNFIKPDVATLCTGQACSMGAFLLSGGKKGKRFALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G ARGQA DI+ +A E+L++++ + ++++ +GQ F K+ D R + EA
Sbjct: 122 IHQPLGGARGQATDIQIQAQEILKLKEMLTRKMAEHSGQTFAKVAADTERDNFMSATEAK 181
Query: 252 EYGLIDRII 260
YGLID+++
Sbjct: 182 NYGLIDKVL 190
>gi|374411871|gb|AEZ48920.1| clp protease proteolytic subunit, partial [Flagellaria indica]
Length = 193
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 122/194 (62%), Gaps = 3/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVI-FIGQNIDEEFSNQILATMLYLDSVDD 126
MP+G PKV +R PGE WVDL N LYRER++ F+GQ I E +NQI+ M+YL D
Sbjct: 1 MPVGVPKVPFRIPGEEDATWVDL-NRLYRERLLFFLGQEIYSEIANQIVGLMVYLSIEDK 59
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
+K ++++IN PGG V +AIYDTMQ + V T C+G A +A F+L GGE R A P
Sbjct: 60 TKDLFLFINSPGGWVISGIAIYDTMQMVAPDVHTICMGIAASMASFVLLGGEVTKRIAFP 119
Query: 187 LSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+R+ + PA A R + ++ EA+EL+++R+ I +KTG+PF +++D+ R
Sbjct: 120 HARVMIHQPASAFYRAKVGEVFLEAEELIKLRETITMVYVQKTGKPFWVVSEDMERDVFM 179
Query: 246 GSQEALEYGLIDRI 259
+ EA +G+ID +
Sbjct: 180 SATEAQAHGIIDLV 193
>gi|89098789|ref|ZP_01171670.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
gi|89086465|gb|EAR65585.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. NRRL
B-14911]
Length = 201
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 124/196 (63%), Gaps = 4/196 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ SN I+A +L+L++ + K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVSNSIVAQLLFLEAENPEKDIT 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ ++ V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQYIRPKVSTVCIGMAASMGAFLLAAGEKGKRFALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + LS +TGQP E I KD R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILSERTGQPLEVIAKDTDRDNFMTAERAL 181
Query: 252 EYGLIDRIIRPPRIKE 267
EYGLID+II ++E
Sbjct: 182 EYGLIDQIISRNVLEE 197
>gi|398815689|ref|ZP_10574354.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
gi|398034174|gb|EJL27450.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
sp. BC25]
Length = 193
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+I +G ID+E +N ++A +L+L + D K +
Sbjct: 4 PMVIEQTSRGERSY---DIYSRLLKDRIILLGTEIDDEIANLVVAQLLFLQAEDPDKDIS 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T CVG A + FLLA G KG R A+P + +
Sbjct: 61 LYINSPGGSVTAGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEVM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA+DIR A+ +++ + + + LS +TGQP+E++ +D R ++EA
Sbjct: 121 IHQPLGGVRGQAEDIRIHAEWIMKTKRQLNEILSERTGQPYERVEQDTDRDNFMSAEEAK 180
Query: 252 EYGLIDRII 260
YGLID II
Sbjct: 181 AYGLIDSII 189
>gi|342316230|ref|YP_004769739.1| ClpP [Magnolia kwangsiensis]
gi|452848713|ref|YP_007474395.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis]
gi|452848796|ref|YP_007474477.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis subsp. biloba]
gi|452848881|ref|YP_007474561.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia grandiflora]
gi|302424205|gb|ADL39081.1| ClpP [Magnolia kwangsiensis]
gi|372862446|gb|AEX98527.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis]
gi|372862529|gb|AEX98609.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis subsp. biloba]
gi|372862614|gb|AEX98693.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis subsp. biloba]
gi|372862699|gb|AEX98777.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia officinalis subsp. biloba]
gi|372862868|gb|AEX98944.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia grandiflora]
gi|372863038|gb|AEX99112.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia grandiflora]
Length = 201
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P ++IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAPTGEFILEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 AAEAQAHGIVDLV 192
>gi|160902469|ref|YP_001568050.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
gi|160360113|gb|ABX31727.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Petrotoga
mobilis SJ95]
Length = 205
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 122/194 (62%), Gaps = 4/194 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWV-DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M I P V+ EG ++ D+++ L ++R++F+G I+++ +N I+A +L+L+S D
Sbjct: 1 MSIPMPVVI---ETEGRYERAYDIYSRLLKDRIVFLGTPINDDVANVIIAQLLFLESQDP 57
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG VT L IYDTMQ +K + T C+G A + LLA G KG R ++P
Sbjct: 58 DKDIFLYINSPGGSVTSGLGIYDTMQYVKPDISTICIGQAASMGAVLLAAGAKGKRYSLP 117
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A G A DI+ A E+LR++D + LS+ TGQ EKI KD R
Sbjct: 118 YSRIMIHQPWGGAEGTAIDIQIHAREILRLKDDLNNILSKHTGQSLEKIEKDTERDFFMN 177
Query: 247 SQEALEYGLIDRII 260
+QEAL YGLID++I
Sbjct: 178 AQEALNYGLIDKVI 191
>gi|121534156|ref|ZP_01665981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
gi|121307259|gb|EAX48176.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermosinus
carboxydivorans Nor1]
Length = 203
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 77/172 (44%), Positives = 115/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R++FIG ID+ +N ++A +L+L+S D K +++YIN PGG VT LAIY
Sbjct: 19 DIYSRLLKDRIVFIGGPIDDHVANLVIAQLLFLESEDPDKDIHLYINSPGGVVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LLA G G R A+P +R+ + P G A+GQA DI+
Sbjct: 79 DTMQYIKPDVSTICLGSAASMAAVLLAAGAPGKRYALPYARVMIHQPLGGAQGQATDIQI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+LR+R+ + L+R TG+P E+I D R S+EA EYG+ID ++
Sbjct: 139 QAREILRLREILNDILARHTGKPLERIQHDTERDYFMSSEEAKEYGIIDAVV 190
>gi|449326816|gb|AGE93394.1| clp protease proteolytic subunit [Alpinia zerumbet]
Length = 205
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 122/203 (60%), Gaps = 1/203 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PGE WV+L+N LYRER++F+GQ + EE SN I+ M+YL D +
Sbjct: 1 MPVGVPKVPFRNPGEEDATWVELYNRLYRERLLFLGQEVKEEISNTIVGLMVYLSIEDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V +AI+DTMQ + V T C+G A +A F+L GGE R A P
Sbjct: 61 RDLYLFINSPGGWVISGIAIFDTMQFVTPNVHTICMGIAASMASFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI + PA + G++ D E +++++R+ + K ++TG P + +D+ R
Sbjct: 121 ARIMIHQPASSFYDGRSGDFFRETRQIVKLRETLTKVYVQRTGMPLWVVAQDMERDIFMS 180
Query: 247 SQEALEYGLIDRIIRPPRIKEDM 269
+ EA +G++D + P ED
Sbjct: 181 ATEAQAHGIVDLVGADPEDFEDF 203
>gi|408417896|ref|YP_006759310.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfobacula
toluolica Tol2]
gi|405105109|emb|CCK78606.1| ClpP: ATP-dependent Clp protease, proteolytic subunit
[Desulfobacula toluolica Tol2]
Length = 207
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 121/193 (62%), Gaps = 3/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ V GE ++ D+++ L ++R+IFIG ID+E +N I+A L+L+S D
Sbjct: 1 MPLIPMVVEQSNRGERAY---DIYSRLLKDRIIFIGSAIDDEIANLIVAQFLFLESEDPE 57
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + YIN PGG VT +AIYDTMQ +K V T C+G A + LL G KG R A+P
Sbjct: 58 KDISFYINSPGGVVTAGMAIYDTMQYIKPDVATVCIGQAASMGALLLTAGTKGKRFALPN 117
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G +GQA DI+ +A+E+LR++D + + LS TGQ EK++ D R +
Sbjct: 118 SRIMIHQPLGGTQGQATDIKIQANEILRMKDILNEILSTHTGQDIEKVSADTERDFFMSA 177
Query: 248 QEALEYGLIDRII 260
EA++YG++D+++
Sbjct: 178 TEAMKYGIVDKVV 190
>gi|421745790|ref|ZP_16183628.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
HPC(L)]
gi|409775704|gb|EKN57162.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus necator
HPC(L)]
Length = 216
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M +G ++ G G + D+++ L +ER++F+ ++++ +N ++A +L+L+S +
Sbjct: 21 MGLGLVPMVVEQSGRGERAY-DIYSRLLKERLVFMVGEVNDQTANLVIAQLLFLESENPD 79
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K V++YIN PGG V+ LA+YDTMQ +K V T C+G A + FLLA G KG R A+P
Sbjct: 80 KDVFLYINSPGGSVSAGLAVYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRLALPN 139
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ARGQA DI +A E+L +R+ + L+ TGQP EKI +D R
Sbjct: 140 SRIMIHQPLGGARGQASDIEIQAREILYLRERLNSILAEVTGQPVEKIARDTDRDNFMSG 199
Query: 248 QEALEYGLIDRII 260
+A++YGLID++I
Sbjct: 200 DQAVDYGLIDKVI 212
>gi|332707230|ref|ZP_08427283.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
gi|332353964|gb|EGJ33451.1| ATP-dependent Clp protease proteolytic subunit ClpP [Moorea
producens 3L]
Length = 200
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 121/198 (61%), Gaps = 2/198 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D + +N ++A +L+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLEADDQEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT + I+DTM + V T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVTAGMGIFDTMNQVAPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L + + L+ TGQP EKI +D R + EA +
Sbjct: 121 HQPLGGAQGQASDIEIQAKEILYHKQQLNNYLAEHTGQPLEKIQEDTERDFFMSATEAKD 180
Query: 253 YGLIDRIIRPPRIKEDMP 270
YGLID++I I +P
Sbjct: 181 YGLIDQVIERRPIATPLP 198
>gi|258514515|ref|YP_003190737.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
gi|257778220|gb|ACV62114.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfotomaculum acetoxidans DSM 771]
Length = 194
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 126/190 (66%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IFIG I++ +N I+A +L+L++ D K +
Sbjct: 5 VPIVVEQTNRGERSY---DIYSRLLKDRIIFIGGPIEDYTANLIIAQLLFLEAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K PV T C+G A + FLLA G G R A+P +RI
Sbjct: 62 HLYINSPGGVVTAGMAIYDTMQYIKPPVSTICLGQAASMGSFLLAAGAPGKRFALPYARI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G +GQA DI A E+LR+++ + K LS+ T QP +KIT+D R +++A
Sbjct: 122 MIHQPSGGMQGQATDIGIHAKEILRMKEILNKLLSKHTKQPLDKITRDSERDFFMSAEDA 181
Query: 251 LEYGLIDRII 260
EYG+ID+I+
Sbjct: 182 KEYGIIDQIV 191
>gi|85859380|ref|YP_461582.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
gi|108935920|sp|Q2LTK5.1|CLPP_SYNAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85722471|gb|ABC77414.1| ATP-dependent Clp protease proteolytic subunit [Syntrophus
aciditrophicus SB]
Length = 194
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 117/180 (65%), Gaps = 1/180 (0%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
G G + D+++ L ++R+IF+G ID+E +N I+A +L+L+S D K ++ Y+N PGG
Sbjct: 12 GRGERAY-DIYSRLLKDRIIFLGTPIDDEVANLIIAQLLFLESEDPDKEIFFYLNTPGGH 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
++ +AIYDTM+ +K PV T CVG A + LLA GE+G RSA+P SRI + P G +
Sbjct: 71 ISSGMAIYDTMRYIKPPVATVCVGQAASMGALLLAAGEQGKRSALPHSRILIHQPLGGFQ 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
GQA DI +A E+LR++D + L+ T QP ++I D R SQ+A EYG+ID II
Sbjct: 131 GQATDIDIQAREILRLKDELSLILADLTNQPLDRIKTDTERDYYMTSQQAKEYGIIDEII 190
>gi|295065752|ref|YP_003587692.1| ATP-dependent Clp protease proteolytic subunit [Anomochloa
marantoidea]
gi|251765276|gb|ACT15430.1| ATP-dependent Clp protease proteolytic subunit [Anomochloa
marantoidea]
Length = 219
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E + I M+YL D +
Sbjct: 1 MPIGVPKVPYRIPGDEDATWVDLYNVMYRERTLFLGQEIRAEITGHITGLMVYLSIEDGN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+Y++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIYLFINSPGGWLISGMAIFDTMQTVTPDIYTICIGIAASMASFILLGGEPACRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R L PA A R + + E +EL +V+D I + + +TG+PF +++D+ R
Sbjct: 121 ARNMLHQPASAYYRARTREFFAEVEELHKVKDMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDAV 193
>gi|33862335|ref|NP_893895.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
gi|67460519|sp|Q7V992.1|CLPP1_PROMM RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33640448|emb|CAE20237.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9313]
Length = 224
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 84/206 (40%), Positives = 124/206 (60%), Gaps = 5/206 (2%)
Query: 59 KPIRGR-IAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQI 114
PI R + P+ +P +L G G + D+++ L RER+IF+G +D++ ++ +
Sbjct: 8 HPIHNRWQGIRPVSSPGILPTVVEQSGRGERAF-DIYSRLLRERIIFLGTGVDDQVADAL 66
Query: 115 LATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLL 174
+A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A + FLL
Sbjct: 67 VAQMLFLEAEDPEKDIQIYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLL 126
Query: 175 AGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEK 234
GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + L+ TGQP K
Sbjct: 127 CGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEIQAKEILFLKETLNGLLAEHTGQPLNK 186
Query: 235 ITKDLSRIKRFGSQEALEYGLIDRII 260
I +D R +A+EYGLIDR++
Sbjct: 187 IAEDTDRDHFLSPAKAVEYGLIDRVV 212
>gi|301353344|ref|YP_003795605.1| clp protease proteolytic subunit [Pteridium aquilinum subsp.
aquilinum]
gi|301016262|gb|ADK47549.1| clp protease proteolytic subunit [Pteridium aquilinum subsp.
aquilinum]
Length = 205
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 122/193 (63%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE VD++N LYRER++F+GQ +D+E +NQ++ M+YL+ D +
Sbjct: 1 MPIGVPKVPFRLPGEEDAVRVDVYNRLYRERLLFLGQQVDDEIANQLIGIMMYLNGEDQA 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+Y+N PGG V ++ YD MQ + V T C+G A + +LAGGE R A+P
Sbjct: 61 KDMYLYVNSPGGAVLAGISAYDAMQFVVPDVHTICMGLAASMGSSILAGGEITRRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E ++RD K +++TG+P I++D+ R
Sbjct: 121 ARVMIHQPASSYYDGQAGECVMEAEEASKLRDCTTKVYAQRTGKPLWVISEDMERDVFLS 180
Query: 247 SQEALEYGLIDRI 259
++EA +YG+ D +
Sbjct: 181 AEEAQDYGVADPV 193
>gi|238926240|ref|ZP_04658000.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
gi|238885920|gb|EEQ49558.1| endopeptidase Clp [Selenomonas flueggei ATCC 43531]
Length = 197
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/190 (43%), Positives = 119/190 (62%), Gaps = 1/190 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L +ER+IF+G ID+ +N I+A ML+L+S D K +++YI
Sbjct: 1 MVVENSGRGERAY-DIYSRLLKERIIFLGGPIDDSVANVIVAQMLFLESEDPDKDIHLYI 59
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT LAIYDTMQ +K V T CVG A + LL G KG R A+P +RI +
Sbjct: 60 NSPGGVVTAGLAIYDTMQYIKPDVSTICVGQAASMGSILLTAGAKGKRYALPHARIMIHQ 119
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQ+ DI+ +A E+LR+R+ + L+R TGQ KI D R ++EA EYG
Sbjct: 120 PLGGAQGQSTDIQIQAKEILRLREVGNEILARHTGQDTAKINIDTERDNFMSAEEAKEYG 179
Query: 255 LIDRIIRPPR 264
LID ++ P+
Sbjct: 180 LIDEVVLRPK 189
>gi|188996270|ref|YP_001930521.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
gi|188931337|gb|ACD65967.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium sp. YO3AOP1]
Length = 201
Score = 159 bits (403), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 83/189 (43%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +TP GE ++ D+++ L ++R+I +G ID+ +N ++A +L+L+S D K +Y
Sbjct: 10 PIVIEQTPRGERAY---DIYSRLLKDRIILLGTPIDDHIANLVVAQLLFLESEDPDKDIY 66
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT LAIYDTM +K V T C+G A + FLL+ G KG R ++P +RI
Sbjct: 67 MYINSPGGVVTAGLAIYDTMNYIKPDVVTICMGQAASMGAFLLSAGAKGKRYSLPNARIM 126
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI A E+LR++ + + L++ TGQP EKI D R ++EA
Sbjct: 127 IHQPLGGFQGQATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEAK 186
Query: 252 EYGLIDRII 260
EYGLID++I
Sbjct: 187 EYGLIDKVI 195
>gi|332296030|ref|YP_004437953.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
gi|332179133|gb|AEE14822.1| ATP-dependent Clp protease proteolytic subunit [Thermodesulfobium
narugense DSM 14796]
Length = 199
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/193 (42%), Positives = 123/193 (63%), Gaps = 4/193 (2%)
Query: 70 IGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSK 128
I P V RT GE + D+++ L +R+IF+G I+E+ +N ++A ML+L++ D ++
Sbjct: 7 ILIPTVTERTSHGERVY---DIYSKLLNDRIIFLGTAINEDVANLVVAQMLFLEADDPNR 63
Query: 129 RVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLS 188
+Y+YIN PGG VT LAIYDTMQ +KSPV T C G A +A +LA GE+G R +P S
Sbjct: 64 DIYLYINSPGGIVTAGLAIYDTMQYVKSPVNTICFGQAASMAAVILAAGERGKRYCLPNS 123
Query: 189 RIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQ 248
R+ + P G A GQA DI +A E+L+V+D + + L++ TG+ KI D R ++
Sbjct: 124 RVLIHQPLGGAEGQATDIAIQAKEILKVKDTLNQILAKHTGKNITKIKNDTERDFYMDAK 183
Query: 249 EALEYGLIDRIIR 261
+A EYG++D I+
Sbjct: 184 QAKEYGIVDEILE 196
>gi|372862192|gb|AEX98276.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Magnolia liliiflora]
Length = 201
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE W+D+ N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWIDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P ++IYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGISIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAPTGEFILEAEELLKLREILTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 AAEAQAHGIVDLV 192
>gi|389815589|ref|ZP_10206852.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
antarcticus DSM 14505]
gi|388465795|gb|EIM08109.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
antarcticus DSM 14505]
Length = 203
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 82/203 (40%), Positives = 129/203 (63%), Gaps = 5/203 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++RVI +G ID+ +N I+A +L+L++ D K +
Sbjct: 5 PTVIEQTSRGERAY---DIYSRLLKDRVIMLGSGIDDNVANSIVAQLLFLEAEDPDKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ ++ V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + LS +TGQP + I+KD R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILHLREKLNQILSERTGQPIDVISKDTDRDNFMTAERAL 181
Query: 252 EYGLIDRIIRPPRIKEDMPRKDA 274
EYGLID++I ++ ED +KD+
Sbjct: 182 EYGLIDQVITRSKLPEDH-KKDS 203
>gi|119491296|ref|ZP_01623350.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
gi|119453460|gb|EAW34622.1| ATP-dependent Clp protease proteolytic subunit [Lyngbya sp. PCC
8106]
Length = 203
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 120/187 (64%), Gaps = 2/187 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L R+R+IF+GQ + + +N I+A ML+LD+ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRDRIIFLGQQVTADLANLIVAQMLFLDADDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L IYDTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIYDTMNHIRPDVSTICIGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ TGQP +I +D R +QEA++
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKKRLNQSLADHTGQPMSRIEQDTERDFFMSAQEAVD 180
Query: 253 YGLIDRI 259
YGLID++
Sbjct: 181 YGLIDQV 187
>gi|290790797|gb|ADD63054.1| clp protease proteolytic subunit [Potamophila parviflora]
Length = 216
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++ +IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFFFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|374411904|gb|AEZ48936.1| clp protease proteolytic subunit, partial [Potarophytum riparium]
Length = 214
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 122/211 (57%), Gaps = 19/211 (9%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVD------------------LWNALYRERVIFIGQNIDEE 109
MPIG PKV +R+PGE WVD L N LYRER++F+GQ +D E
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVPYASKGARMVSKGYYFVLINRLYRERLLFLGQEVDSE 60
Query: 110 FSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHL 169
SNQ++ M+YL D ++ +Y++IN PGG V P +AIYDTMQ + V T C+G A +
Sbjct: 61 ISNQLVGLMVYLSIEDATRDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTICMGLAASM 120
Query: 170 AGFLLAGGEKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKT 228
F+L GGE R A P +R+ + PA + QA + EA+ELL++R+ + K ++T
Sbjct: 121 GSFILVGGEITKRLAFPHARVMIHQPASSFYEAQAGEFILEAEELLKLRETLTKVYVQRT 180
Query: 229 GQPFEKITKDLSRIKRFGSQEALEYGLIDRI 259
G P +++D+ R + EA YG++D +
Sbjct: 181 GNPLWVVSEDMERDVFMSATEAQAYGIVDLV 211
>gi|345531825|pdb|3ST9|A Chain A, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531826|pdb|3ST9|B Chain B, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531827|pdb|3ST9|C Chain C, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531828|pdb|3ST9|D Chain D, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531829|pdb|3ST9|E Chain E, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531830|pdb|3ST9|F Chain F, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531831|pdb|3ST9|G Chain G, Crystal Structure Of Clpp In Heptameric Form From
Staphylococcus Aureus
gi|345531832|pdb|3STA|V Chain V, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531833|pdb|3STA|A Chain A, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531834|pdb|3STA|B Chain B, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531835|pdb|3STA|C Chain C, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531836|pdb|3STA|E Chain E, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531837|pdb|3STA|F Chain F, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531838|pdb|3STA|G Chain G, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531839|pdb|3STA|I Chain I, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531840|pdb|3STA|K Chain K, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531841|pdb|3STA|L Chain L, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531842|pdb|3STA|M Chain M, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531843|pdb|3STA|N Chain N, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531844|pdb|3STA|S Chain S, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
gi|345531845|pdb|3STA|T Chain T, Crystal Structure Of Clpp In Tetradecameric Form From
Staphylococcus Aureus
Length = 197
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 7 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 63
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 64 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 123
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA
Sbjct: 124 IHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 183
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 184 EYGLIDEVMVP 194
>gi|171463607|ref|YP_001797720.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
gi|171193145|gb|ACB44106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Polynucleobacter necessarius subsp. necessarius STIR1]
Length = 209
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L RERVIF+ ++++ +N ++A +L+L+S + K
Sbjct: 16 LGLVPMVIETSGRGERAY-DIYSRLLRERVIFLVGEVNDQTANLVIAQLLFLESENPDKE 74
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL GE G R A+P SR
Sbjct: 75 ISLYINSPGGAVSAGLAIYDTMQFIKPHVSTLCMGMAASMGAFLLCAGENGKRYALPNSR 134
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
+ + P G ARGQA DI +A E+L +R+ + K L+ +TGQ E I KD R +++
Sbjct: 135 VMIHQPLGGARGQASDIEIQAREILYLRERLNKILADRTGQSIETIAKDTDRDNFMSAEQ 194
Query: 250 ALEYGLIDRII 260
A +YGLID++I
Sbjct: 195 ARDYGLIDKVI 205
>gi|428307443|ref|YP_007144268.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
gi|428248978|gb|AFZ14758.1| ATP-dependent Clp protease proteolytic subunit [Crinalium
epipsammum PCC 9333]
Length = 228
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/195 (43%), Positives = 123/195 (63%), Gaps = 2/195 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L RER+IF+G +D+ ++ ++A +L+L+S D K + +
Sbjct: 27 PMVVEQT-GLGERAF-DIYSRLLRERIIFMGTPVDDTVADSLVAQLLFLESEDPEKDIQL 84
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT +AIYDTMQ ++ V T C G A + FLL+GG KG R A+P SRI +
Sbjct: 85 YINSPGGSVTAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMI 144
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L + + + L+ TGQP +KIT D R S EA +
Sbjct: 145 HQPLGGAQGQAVDIEIQAKEILYHKRVLNELLAEHTGQPIDKITADTERDFFMSSAEAKD 204
Query: 253 YGLIDRIIRPPRIKE 267
YGLID++I +K+
Sbjct: 205 YGLIDQVIDRHNLKD 219
>gi|427417857|ref|ZP_18908040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
gi|425760570|gb|EKV01423.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptolyngbya
sp. PCC 7375]
Length = 200
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/186 (43%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
V+ G G + D+++ L RER++F+G +D+ ++ I+A +LYLDS D K V +YI
Sbjct: 4 VVLEQSGRGERAF-DIYSRLLRERIVFLGSGVDDTLADSIVAQLLYLDSEDPEKDVQIYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG +T +AIYDTMQ ++ V T C G A + FLL+GG KG R A+P SRI +
Sbjct: 63 NSPGGSITAGMAIYDTMQQIRPDVVTICFGLAASMGAFLLSGGAKGKRMALPSSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L ++ + + L+ TGQP ++I +D R + EA +YG
Sbjct: 123 PLGGAQGQAVDIEIQAREILYLKQRLNELLAGHTGQPLDRIAEDTERDFFMSAAEAADYG 182
Query: 255 LIDRII 260
LID +I
Sbjct: 183 LIDTVI 188
>gi|336436530|ref|ZP_08616242.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_4_56FAA]
gi|336007395|gb|EGN37420.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 1_4_56FAA]
Length = 193
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ + + +N I+A +L+L++ D +K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDVSANIIVAQLLFLEADDPNKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLL+GG KG R A+P + I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMQYIKCDVSTVCIGMAASMGSFLLSGGAKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA +I+ A+ +L++R + + L+ TGQP E I +D R +Q+A
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILKIRKKLNEILAANTGQPLEVIQRDTERDNFMSAQQA 180
Query: 251 LEYGLIDRII 260
EYGLID +I
Sbjct: 181 KEYGLIDEVI 190
>gi|228016690|gb|ACP51518.1| ATP-dependent Clp protease proteolytic subunit [Pinus aristata]
Length = 196
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDATWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDIFSFLNCPGGSVIPGVGLFDMMQVIVPNVHTICMGVAASMGSFILIGGEITKRMALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A + NE + +R+YI K +T P E I +DL R
Sbjct: 121 ARVMIHQPASSYYDGPAAEFHNEVKHITMLRNYITKCYIERTDNPEEVIQRDLDRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEARAYGIVDTV 193
>gi|126173838|ref|YP_001049987.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS155]
gi|153000122|ref|YP_001365803.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS185]
gi|160874744|ref|YP_001554060.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS195]
gi|217973910|ref|YP_002358661.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS223]
gi|373948994|ref|ZP_09608955.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS183]
gi|378707997|ref|YP_005272891.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS678]
gi|386325167|ref|YP_006021284.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
BA175]
gi|386340598|ref|YP_006036964.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS117]
gi|418023625|ref|ZP_12662610.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS625]
gi|166214708|sp|A3D305.1|CLPP_SHEB5 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214709|sp|A6WLQ1.1|CLPP_SHEB8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082464|sp|A9KWH7.1|CLPP_SHEB9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|254763799|sp|B8E5E9.1|CLPP_SHEB2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|125997043|gb|ABN61118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
baltica OS155]
gi|151364740|gb|ABS07740.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS185]
gi|160860266|gb|ABX48800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS195]
gi|217499045|gb|ACK47238.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS223]
gi|315266986|gb|ADT93839.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
baltica OS678]
gi|333819312|gb|AEG11978.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
BA175]
gi|334862999|gb|AEH13470.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS117]
gi|353537508|gb|EHC07065.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS625]
gi|373885594|gb|EHQ14486.1| ATP-dependent Clp protease proteolytic subunit [Shewanella baltica
OS183]
Length = 202
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSY---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRHCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +++ + + L+ TGQP E + +D R + +A
Sbjct: 129 MIHQPLGGFQGQASDIAIHAKEILGIKNKLNQMLAEHTGQPLEVVERDTDRDNFMSATQA 188
Query: 251 LEYGLIDRII 260
+EYGL+D ++
Sbjct: 189 VEYGLVDSVM 198
>gi|15923758|ref|NP_371292.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu50]
gi|15926445|ref|NP_373978.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus N315]
gi|21282459|ref|NP_645547.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MW2]
gi|49483025|ref|YP_040249.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MRSA252]
gi|49485640|ref|YP_042861.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSSA476]
gi|57650109|ref|YP_185707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus COL]
gi|82750474|ref|YP_416215.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87161484|ref|YP_493453.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_FPR3757]
gi|88194551|ref|YP_499347.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus NCTC 8325]
gi|148267228|ref|YP_001246171.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH9]
gi|150393277|ref|YP_001315952.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JH1]
gi|151220948|ref|YP_001331770.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156979096|ref|YP_001441355.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus Mu3]
gi|161509038|ref|YP_001574697.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus USA300_TCH1516]
gi|221141842|ref|ZP_03566335.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|253317258|ref|ZP_04840471.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus str. CF-Marseille]
gi|253731397|ref|ZP_04865562.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253732783|ref|ZP_04866948.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|255005559|ref|ZP_05144160.2| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus Mu50-omega]
gi|257424888|ref|ZP_05601315.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257427556|ref|ZP_05603955.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257430187|ref|ZP_05606571.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257432888|ref|ZP_05609248.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257435792|ref|ZP_05611840.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257794910|ref|ZP_05643889.1| clp protease [Staphylococcus aureus A9781]
gi|258418226|ref|ZP_05682491.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|258421524|ref|ZP_05684449.1| clp protease [Staphylococcus aureus A9719]
gi|258423417|ref|ZP_05686308.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|258439133|ref|ZP_05690177.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|258440939|ref|ZP_05690774.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|258445769|ref|ZP_05693946.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|258449581|ref|ZP_05697683.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|258452184|ref|ZP_05700200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|258453981|ref|ZP_05701953.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|262049552|ref|ZP_06022422.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262052698|ref|ZP_06024889.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|269202390|ref|YP_003281659.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|282895064|ref|ZP_06303285.1| Clp protease [Staphylococcus aureus A8117]
gi|282903398|ref|ZP_06311289.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282905178|ref|ZP_06313035.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282908157|ref|ZP_06315988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282910415|ref|ZP_06318219.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282913610|ref|ZP_06321399.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282916110|ref|ZP_06323873.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282918561|ref|ZP_06326298.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282922066|ref|ZP_06329763.1| Clp protease [Staphylococcus aureus A9765]
gi|282923527|ref|ZP_06331207.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282926635|ref|ZP_06334265.1| Clp protease [Staphylococcus aureus A10102]
gi|283769931|ref|ZP_06342823.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283957600|ref|ZP_06375053.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|284023791|ref|ZP_06378189.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus 132]
gi|293500653|ref|ZP_06666504.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|293509601|ref|ZP_06668312.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|293524187|ref|ZP_06670874.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|294850496|ref|ZP_06791225.1| Clp protease [Staphylococcus aureus A9754]
gi|295406492|ref|ZP_06816298.1| Clp protease [Staphylococcus aureus A8819]
gi|295427347|ref|ZP_06819982.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296276994|ref|ZP_06859501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MR1]
gi|297208504|ref|ZP_06924933.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297245218|ref|ZP_06929092.1| Clp protease [Staphylococcus aureus A8796]
gi|297590298|ref|ZP_06948937.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|300912596|ref|ZP_07130039.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|304381609|ref|ZP_07364259.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|379014058|ref|YP_005290294.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|379020540|ref|YP_005297202.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|379795239|ref|YP_005325237.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MSHR1132]
gi|384547051|ref|YP_005736304.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|384549630|ref|YP_005738882.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus JKD6159]
gi|384861436|ref|YP_005744156.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. JKD6008]
gi|384864093|ref|YP_005749452.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|384868298|ref|YP_005748494.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|384869354|ref|YP_005752068.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|385781094|ref|YP_005757265.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|386728536|ref|YP_006194919.1| ATP-dependent endopeptidase clp proteolytic subunit [Staphylococcus
aureus subsp. aureus 71193]
gi|386830410|ref|YP_006237064.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus HO 5096 0412]
gi|387142462|ref|YP_005730855.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|387149931|ref|YP_005741495.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|387602124|ref|YP_005733645.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|387779903|ref|YP_005754701.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus LGA251]
gi|404478169|ref|YP_006709599.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 08BA02176]
gi|415683595|ref|ZP_11448811.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|415689458|ref|ZP_11452760.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|415693848|ref|ZP_11455519.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|416842650|ref|ZP_11905104.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|416847874|ref|ZP_11907423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|417650451|ref|ZP_12300222.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|417652532|ref|ZP_12302279.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|417655183|ref|ZP_12304897.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|417796631|ref|ZP_12443837.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|417798637|ref|ZP_12445797.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|417802514|ref|ZP_12449572.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|417887242|ref|ZP_12531375.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|417890528|ref|ZP_12534601.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|417892365|ref|ZP_12536415.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|417896583|ref|ZP_12540529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|417898150|ref|ZP_12542074.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|417902321|ref|ZP_12546188.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|417904583|ref|ZP_12548405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|418280847|ref|ZP_12893672.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|418283166|ref|ZP_12895922.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|418284347|ref|ZP_12897073.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|418308841|ref|ZP_12920432.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|418309577|ref|ZP_12921131.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|418313751|ref|ZP_12925236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|418315200|ref|ZP_12926664.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|418318354|ref|ZP_12929759.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|418322160|ref|ZP_12933497.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|418423914|ref|ZP_12997054.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|418426888|ref|ZP_12999909.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|418429820|ref|ZP_13002744.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|418432714|ref|ZP_13005507.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|418436430|ref|ZP_13008239.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|418439328|ref|ZP_13011043.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|418442304|ref|ZP_13013916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|418445435|ref|ZP_13016920.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|418448373|ref|ZP_13019772.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|418451192|ref|ZP_13022531.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|418454216|ref|ZP_13025483.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|418457120|ref|ZP_13028329.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|418561062|ref|ZP_13125562.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|418561317|ref|ZP_13125809.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|418565775|ref|ZP_13130170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|418566869|ref|ZP_13131236.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|418570534|ref|ZP_13134800.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|418574077|ref|ZP_13138254.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|418578667|ref|ZP_13142762.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|418581482|ref|ZP_13145563.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|418595736|ref|ZP_13159333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|418598777|ref|ZP_13162284.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|418601712|ref|ZP_13165128.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|418639487|ref|ZP_13201734.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|418640943|ref|ZP_13203159.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|418644345|ref|ZP_13206491.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|418647139|ref|ZP_13209218.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|418650986|ref|ZP_13212997.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|418654288|ref|ZP_13216201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|418656309|ref|ZP_13218123.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|418657987|ref|ZP_13219735.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|418660942|ref|ZP_13222548.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|418872430|ref|ZP_13426769.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|418874789|ref|ZP_13429055.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|418877613|ref|ZP_13431852.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|418880473|ref|ZP_13434693.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|418883398|ref|ZP_13437597.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|418886060|ref|ZP_13440210.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|418888666|ref|ZP_13442802.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|418891410|ref|ZP_13445527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|418894225|ref|ZP_13448326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|418897185|ref|ZP_13451258.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|418900155|ref|ZP_13454214.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|418903043|ref|ZP_13457084.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|418904859|ref|ZP_13458888.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|418908561|ref|ZP_13462569.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|418913957|ref|ZP_13467929.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|418916633|ref|ZP_13470594.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|418919641|ref|ZP_13473584.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|418922437|ref|ZP_13476354.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|418925006|ref|ZP_13478909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|418928091|ref|ZP_13481977.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|418930802|ref|ZP_13484650.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|418933703|ref|ZP_13487527.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|418948897|ref|ZP_13501177.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|418949913|ref|ZP_13502132.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|418952635|ref|ZP_13504651.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|418979235|ref|ZP_13527032.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|418981671|ref|ZP_13529386.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|418985309|ref|ZP_13532998.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|418987671|ref|ZP_13535344.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|418990658|ref|ZP_13538319.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|418993481|ref|ZP_13541118.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|419775511|ref|ZP_14301450.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|419785631|ref|ZP_14311382.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|421149542|ref|ZP_15609200.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|422744913|ref|ZP_16798868.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|422746628|ref|ZP_16800559.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|424770820|ref|ZP_18198002.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|424784626|ref|ZP_18211436.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|440708128|ref|ZP_20888804.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|440734249|ref|ZP_20913861.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|443637771|ref|ZP_21121839.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443640354|ref|ZP_21124345.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|448741163|ref|ZP_21723134.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|448745335|ref|ZP_21727190.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
gi|54036854|sp|P63786.1|CLPP_STAAW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54036862|sp|P99089.1|CLPP_STAAN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|54040892|sp|P63785.1|CLPP_STAAM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748671|sp|Q6GB62.1|CLPP_STAAS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56748685|sp|Q6GIM3.1|CLPP_STAAR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460165|sp|Q5HHQ0.1|CLPP_STAAC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|90183185|sp|Q2YSF8.1|CLPP_STAAB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|116243169|sp|Q2G036.1|CLPP_STAA8 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124013828|sp|Q2FIM5.1|CLPP_STAA3 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214713|sp|A7WZR9.1|CLPP_STAA1 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|172048797|sp|A6QF76.1|CLPP_STAAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082468|sp|A6TZP7.1|CLPP_STAA2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082469|sp|A5IQX2.1|CLPP_STAA9 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|189082470|sp|A8Z045.1|CLPP_STAAT RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|13700659|dbj|BAB41956.1| clpP [Staphylococcus aureus subsp. aureus N315]
gi|14246537|dbj|BAB56930.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu50]
gi|21203896|dbj|BAB94595.1| clpP [Staphylococcus aureus subsp. aureus MW2]
gi|49241154|emb|CAG39832.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MRSA252]
gi|49244083|emb|CAG42509.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSSA476]
gi|57284295|gb|AAW36389.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus COL]
gi|82656005|emb|CAI80410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus RF122]
gi|87127458|gb|ABD21972.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus USA300_FPR3757]
gi|87202109|gb|ABD29919.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus NCTC 8325]
gi|147740297|gb|ABQ48595.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus subsp. aureus JH9]
gi|149945729|gb|ABR51665.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus JH1]
gi|150373748|dbj|BAF67008.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newman]
gi|156721231|dbj|BAF77648.1| ATP-dependent Clp protease proteolytic subunit homologue
[Staphylococcus aureus subsp. aureus Mu3]
gi|160367847|gb|ABX28818.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|253724847|gb|EES93576.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus USA300_TCH959]
gi|253729257|gb|EES97986.1| ATP-dependent Clp protease proteolytic subunit family protein
[Staphylococcus aureus subsp. aureus TCH130]
gi|257272458|gb|EEV04581.1| clp protease [Staphylococcus aureus subsp. aureus 55/2053]
gi|257275749|gb|EEV07222.1| clp protease [Staphylococcus aureus subsp. aureus 65-1322]
gi|257279384|gb|EEV09985.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus 68-397]
gi|257282303|gb|EEV12438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus E1410]
gi|257284983|gb|EEV15102.1| clp protease [Staphylococcus aureus subsp. aureus M876]
gi|257788882|gb|EEV27222.1| clp protease [Staphylococcus aureus A9781]
gi|257839019|gb|EEV63498.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A9763]
gi|257842450|gb|EEV66874.1| clp protease [Staphylococcus aureus A9719]
gi|257846478|gb|EEV70501.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9635]
gi|257847705|gb|EEV71702.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A9299]
gi|257852453|gb|EEV76374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
aureus A8115]
gi|257855345|gb|EEV78283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6300]
gi|257857089|gb|EEV79988.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus A6224]
gi|257860399|gb|EEV83231.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5948]
gi|257863846|gb|EEV86602.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus A5937]
gi|259159395|gb|EEW44448.1| hypothetical protein SA930_1868 [Staphylococcus aureus 930918-3]
gi|259162388|gb|EEW46960.1| hypothetical protein SAD30_0974 [Staphylococcus aureus D30]
gi|262074680|gb|ACY10653.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ED98]
gi|269940345|emb|CBI48722.1| putative ATP-dependent Clp protease proteolyticsubunit
[Staphylococcus aureus subsp. aureus TW20]
gi|282314395|gb|EFB44785.1| Clp protease [Staphylococcus aureus subsp. aureus C101]
gi|282317695|gb|EFB48067.1| Clp protease [Staphylococcus aureus subsp. aureus C427]
gi|282320058|gb|EFB50405.1| Clp protease [Staphylococcus aureus subsp. aureus D139]
gi|282322642|gb|EFB52964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M899]
gi|282325807|gb|EFB56115.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WBG10049]
gi|282327822|gb|EFB58104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus WW2703/97]
gi|282331585|gb|EFB61097.1| endopeptidase ClpP [Staphylococcus aureus subsp. aureus Btn1260]
gi|282591528|gb|EFB96600.1| Clp protease [Staphylococcus aureus A10102]
gi|282593724|gb|EFB98716.1| Clp protease [Staphylococcus aureus A9765]
gi|282596353|gb|EFC01314.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus C160]
gi|282762560|gb|EFC02699.1| Clp protease [Staphylococcus aureus A8117]
gi|283460078|gb|EFC07168.1| ATP-dependent Clp protease subunit [Staphylococcus aureus subsp.
aureus H19]
gi|283470062|emb|CAQ49273.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ST398]
gi|283791051|gb|EFC29866.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus A017934/97]
gi|285816470|gb|ADC36957.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus 04-02981]
gi|290921150|gb|EFD98211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus M1015]
gi|291095658|gb|EFE25919.1| Clp protease [Staphylococcus aureus subsp. aureus 58-424]
gi|291467698|gb|EFF10213.1| Clp protease [Staphylococcus aureus subsp. aureus M809]
gi|294822634|gb|EFG39074.1| Clp protease [Staphylococcus aureus A9754]
gi|294968637|gb|EFG44660.1| Clp protease [Staphylococcus aureus A8819]
gi|295128735|gb|EFG58366.1| Clp protease [Staphylococcus aureus subsp. aureus EMRSA16]
gi|296886759|gb|EFH25663.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC 51811]
gi|297177889|gb|EFH37138.1| Clp protease [Staphylococcus aureus A8796]
gi|297576597|gb|EFH95312.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus MN8]
gi|298694101|gb|ADI97323.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ED133]
gi|300886842|gb|EFK82044.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH70]
gi|302332479|gb|ADL22672.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus JKD6159]
gi|302750665|gb|ADL64842.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus str. JKD6008]
gi|304339972|gb|EFM05916.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ATCC BAA-39]
gi|312438803|gb|ADQ77874.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus TCH60]
gi|312829260|emb|CBX34102.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus ECT-R 2]
gi|315129024|gb|EFT85021.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS03]
gi|315194387|gb|EFU24779.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS00]
gi|315196246|gb|EFU26600.1| S14 family endopeptidase ClpP [Staphylococcus aureus subsp. aureus
CGS01]
gi|320139896|gb|EFW31757.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA131]
gi|320142013|gb|EFW33841.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus MRSA177]
gi|323438624|gb|EGA96368.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O11]
gi|323441949|gb|EGA99586.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus O46]
gi|329313489|gb|AEB87902.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus T0131]
gi|329723806|gb|EGG60334.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21189]
gi|329724642|gb|EGG61149.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21172]
gi|329729644|gb|EGG66045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21193]
gi|334268522|gb|EGL86960.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21305]
gi|334274514|gb|EGL92832.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21318]
gi|334275498|gb|EGL93787.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21310]
gi|341840549|gb|EGS82052.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21235]
gi|341843411|gb|EGS84638.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21266]
gi|341846489|gb|EGS87681.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21269]
gi|341849148|gb|EGS90299.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21259]
gi|341854663|gb|EGS95529.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21200]
gi|341857827|gb|EGS98637.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21201]
gi|341858295|gb|EGS99092.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21195]
gi|344177005|emb|CCC87469.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus LGA251]
gi|356872229|emb|CCE58568.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus MSHR1132]
gi|359829849|gb|AEV77827.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus M013]
gi|364522083|gb|AEW64833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 11819-97]
gi|365167418|gb|EHM58883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21178]
gi|365168239|gb|EHM59592.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21202]
gi|365173650|gb|EHM64138.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21209]
gi|365223769|gb|EHM65044.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus VCU006]
gi|365235450|gb|EHM76369.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21334]
gi|365236874|gb|EHM77752.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21194]
gi|365238910|gb|EHM79738.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21331]
gi|365243223|gb|EHM83909.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21232]
gi|365243830|gb|EHM84498.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21340]
gi|371970171|gb|EHO87601.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21252]
gi|371972686|gb|EHO90060.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21264]
gi|371977662|gb|EHO94925.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21262]
gi|371980174|gb|EHO97388.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21333]
gi|371983433|gb|EHP00577.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21272]
gi|371983904|gb|EHP01037.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21283]
gi|374362755|gb|AEZ36860.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VC40]
gi|374397523|gb|EHQ68732.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21345]
gi|374398927|gb|EHQ70079.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21343]
gi|374400646|gb|EHQ71756.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21342]
gi|375016574|gb|EHS10213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-99]
gi|375017513|gb|EHS11127.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-3]
gi|375020140|gb|EHS13681.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-24]
gi|375025890|gb|EHS19283.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-55]
gi|375026798|gb|EHS20176.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-91]
gi|375030962|gb|EHS24257.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-88]
gi|375034031|gb|EHS27209.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-105]
gi|375039561|gb|EHS32485.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-111]
gi|375039717|gb|EHS32635.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-122]
gi|375367180|gb|EHS71148.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-125]
gi|375370404|gb|EHS74213.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-157]
gi|375376349|gb|EHS79884.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-189]
gi|375378040|gb|EHS81464.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-160]
gi|377696321|gb|EHT20677.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1165]
gi|377696694|gb|EHT21049.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1114]
gi|377698573|gb|EHT22921.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1057]
gi|377705237|gb|EHT29545.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1214]
gi|377707151|gb|EHT31445.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1500]
gi|377707491|gb|EHT31784.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1242]
gi|377711709|gb|EHT35938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1605]
gi|377716064|gb|EHT40249.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1769]
gi|377716669|gb|EHT40851.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1750]
gi|377719459|gb|EHT43629.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1835]
gi|377722780|gb|EHT46905.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1096]
gi|377727358|gb|EHT51465.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1150]
gi|377732367|gb|EHT56418.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1176]
gi|377732911|gb|EHT56961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1213]
gi|377735760|gb|EHT59790.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1233]
gi|377738003|gb|EHT62012.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1612]
gi|377742058|gb|EHT66043.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1770]
gi|377746301|gb|EHT70272.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG2018]
gi|377746640|gb|EHT70610.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG290]
gi|377751138|gb|EHT75072.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1267]
gi|377754176|gb|EHT78085.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG1524]
gi|377755900|gb|EHT79798.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG149]
gi|377757459|gb|EHT81347.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC340D]
gi|377761964|gb|EHT85833.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC341D]
gi|377766399|gb|EHT90232.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC345D]
gi|377767166|gb|EHT90979.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC348]
gi|377771483|gb|EHT95237.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC128]
gi|377772129|gb|EHT95882.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIGC93]
gi|379992914|gb|EIA14363.1| ClpP [Staphylococcus aureus subsp. aureus DR10]
gi|383362393|gb|EID39746.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-M]
gi|383970734|gb|EID86827.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CO-23]
gi|384229829|gb|AFH69076.1| ClpP [Staphylococcus aureus subsp. aureus 71193]
gi|385195802|emb|CCG15411.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus subsp. aureus HO 5096 0412]
gi|387720067|gb|EIK07989.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS3a]
gi|387720500|gb|EIK08410.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS2]
gi|387722162|gb|EIK09994.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS1]
gi|387726898|gb|EIK14438.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS4]
gi|387728978|gb|EIK16450.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS5]
gi|387731240|gb|EIK18554.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS6]
gi|387737314|gb|EIK24384.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS8]
gi|387738791|gb|EIK25811.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS9]
gi|387739281|gb|EIK26289.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS7]
gi|387746356|gb|EIK33088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS10]
gi|387746991|gb|EIK33707.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11a]
gi|387748374|gb|EIK35058.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus VRS11b]
gi|394330459|gb|EJE56551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus str. Newbould 305]
gi|402347961|gb|EJU82967.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CM05]
gi|404439658|gb|AFR72851.1| putative ATP-dependent Clp protease proteolytic subunit
[Staphylococcus aureus 08BA02176]
gi|408423155|emb|CCJ10566.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408425145|emb|CCJ12532.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408427133|emb|CCJ14496.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408429120|emb|CCJ26285.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408431108|emb|CCJ18423.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408433102|emb|CCJ20387.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408435093|emb|CCJ22353.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|408437078|emb|CCJ24321.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus subsp. aureus ST228]
gi|421957225|gb|EKU09549.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus CN79]
gi|436431277|gb|ELP28630.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus DSM 20231]
gi|436505312|gb|ELP41236.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21282]
gi|443405001|gb|ELS63615.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21236]
gi|443405495|gb|ELS64098.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus 21196]
gi|445548141|gb|ELY16396.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/314250]
gi|445561343|gb|ELY17551.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
aureus KT/Y21]
Length = 195
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 182 EYGLIDEVMVP 192
>gi|434405726|ref|YP_007148611.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
gi|428259981|gb|AFZ25931.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Cylindrospermum stagnale PCC 7417]
Length = 201
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 9/190 (4%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDAEDSEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELL----RVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
P G A+GQA DI +A E+L R+ DY L+ TGQP E+I +D R +EA
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKRRLNDY----LAEHTGQPIERIAEDTERDFFMSPEEA 178
Query: 251 LEYGLIDRII 260
EYGLID++I
Sbjct: 179 REYGLIDQVI 188
>gi|318043033|ref|ZP_07974989.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CB0101]
Length = 194
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 113/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G ID++ ++ ++A +L+L++ D K + +Y+N PGG VT LAIY
Sbjct: 17 DIYSRLLRERIIFLGTGIDDQVADALVAQLLFLEAEDPEKDIQIYVNSPGGSVTAGLAIY 76
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ + V T C G A + FLL+GG KG R A+P +RI + P G A+GQA DI
Sbjct: 77 DTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEI 136
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L ++D + ++ TGQP EKI +D R EA++YGLIDR++
Sbjct: 137 QAKEILYLKDTLNGLMAEHTGQPLEKIAEDTDRDYFLSPAEAVQYGLIDRVV 188
>gi|218290814|ref|ZP_03494883.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
gi|218239172|gb|EED06373.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius LAA1]
Length = 198
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R++ +G ID++ +N I+A +L+L + D K +
Sbjct: 6 PYVIEQTSRGERTY---DIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQ 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT +AIYDTMQ ++ V T C+G A + FLLA GEKG R A+P + I
Sbjct: 63 MYINSPGGSVTAGMAIYDTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G GQA DI+ A+ +L+ +D + + LS +TGQP E I +D R ++EA
Sbjct: 123 IHQPLGGVEGQASDIKIHAEWILKTKDKLNRLLSERTGQPLEVIERDTDRDHFMTAEEAK 182
Query: 252 EYGLIDRIIRP 262
YGLID ++ P
Sbjct: 183 AYGLIDEVLHP 193
>gi|427718283|ref|YP_007066277.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
gi|427350719|gb|AFY33443.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 7507]
Length = 201
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/186 (41%), Positives = 115/186 (61%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDNSIANLIVAQLLFLDADDSEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + L+ TGQP E+I +D R +EA EYG
Sbjct: 123 PLGGAQGQATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPEEAREYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|258511812|ref|YP_003185246.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|384135662|ref|YP_005518376.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
gi|257478538|gb|ACV58857.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
DSM 446]
gi|339289747|gb|AEJ43857.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus acidocaldarius subsp. acidocaldarius
Tc-4-1]
Length = 198
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R++ +G ID++ +N I+A +L+L + D K +
Sbjct: 6 PYVIEQTSRGERTY---DIYSRLLKDRIVILGTPIDDQVANSIVAQLLFLAADDPEKDIQ 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT +AIYDTMQ ++ V T C+G A + FLLA GEKG R A+P + I
Sbjct: 63 MYINSPGGSVTAGMAIYDTMQHIRPAVSTLCIGMAASMGAFLLAAGEKGKRYALPNAEIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G GQA DI+ A+ +L+ +D + + LS +TGQP E I +D R ++EA
Sbjct: 123 IHQPLGGVEGQASDIKIHAEWILKTKDKLNRLLSERTGQPLEVIERDTDRDHFMTAEEAK 182
Query: 252 EYGLIDRIIRP 262
YGLID ++ P
Sbjct: 183 AYGLIDEVLHP 193
>gi|189162296|ref|YP_001936542.1| ATP-dependent Clp protease proteolytic subunit [Fagopyrum
esculentum subsp. ancestrale]
gi|166065382|gb|ABY79757.1| ATP-dependent Clp protease proteolytic subunit [Fagopyrum
esculentum subsp. ancestrale]
Length = 210
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/195 (40%), Positives = 119/195 (61%), Gaps = 1/195 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PG+ WVD++N LYR R++F+ Q I E SN ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRLPGDEDATWVDVYNRLYRSRLLFLTQEITTEISNYLIGLMVYLSIEDQT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ Y++IN PGG V P +AI+D MQ + + T C+G A + F+L GGE R A P
Sbjct: 61 QDFYLFINCPGGWVLPGIAIFDAMQLVLPDIYTICMGIAASMGSFILVGGEITKRFAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G + EA+ELL +R+ + K +++TGQPF +T+DL R
Sbjct: 121 ARVMIHQPASSFHEGSTGECMMEAEELLTLRETLTKVYAQRTGQPFGVLTEDLERDVFMS 180
Query: 247 SQEALEYGLIDRIIR 261
++EA +G+ID I +
Sbjct: 181 AREAQAHGIIDLIAK 195
>gi|443322206|ref|ZP_21051237.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
gi|442788092|gb|ELR97794.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
Length = 202
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 118/190 (62%), Gaps = 2/190 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER+IF+G+ + +E +N I+A +L+L++ D K + +
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIIFLGEEVTDELANLIVAQLLFLEAEDPEKDINL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM + V T C+G A + FLL GG KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQVSPDVSTICIGLAASMGAFLLTGGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + L+ T QP EKI +D R ++EA +
Sbjct: 121 HQPLGGAQGQAADIAIQAQEILYIKKKLNLYLANNTNQPLEKIEEDTERDFFMSAEEAKQ 180
Query: 253 YGLIDRIIRP 262
YGLID++I P
Sbjct: 181 YGLIDKVIEP 190
>gi|302824555|ref|XP_002993920.1| hypothetical protein SELMODRAFT_137715 [Selaginella moellendorffii]
gi|300138287|gb|EFJ05061.1| hypothetical protein SELMODRAFT_137715 (mitochondrion) [Selaginella
moellendorffii]
Length = 224
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 84/211 (39%), Positives = 125/211 (59%), Gaps = 15/211 (7%)
Query: 69 PIGTPKVLYRTPGEGSWQWVDLW-----------NALYRERVIFIGQNIDEEFSNQILAT 117
PIG PKV +R GE +D N LYRER++F+GQN+D+E +NQI+
Sbjct: 9 PIGVPKVSFRISGEEDMVRIDTHCPVHRRQPIPTNRLYRERLLFLGQNMDDEIANQIICI 68
Query: 118 MLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGG 177
M+YL+ + SK +Y+YIN PGG V +++YD MQ + V T CVG A + F+L GG
Sbjct: 69 MMYLNGENRSKDIYLYINSPGGAVLAGISVYDMMQFVVPDVHTICVGLAASMGSFILTGG 128
Query: 178 EKGNRSAMPLSRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKIT 236
R A+P +R+ + PA + GQA + EA+E+L++RD I +RKTG+P ++
Sbjct: 129 GITKRIALPHARVMIHQPASSFYEGQAGECLMEAEEILKLRDCITSIYARKTGKPLWVVS 188
Query: 237 KDLSRIKRFGSQEALEYGLIDRII---RPPR 264
+D+ R ++EA YG+ID ++ PPR
Sbjct: 189 EDMERDVFMSAREARVYGIIDLVVMDTSPPR 219
>gi|187928950|ref|YP_001899437.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12J]
gi|241663134|ref|YP_002981494.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia pickettii
12D]
gi|309781948|ref|ZP_07676679.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
gi|404377636|ref|ZP_10982736.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia sp.
5_2_56FAA]
gi|187725840|gb|ACD27005.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12J]
gi|240865161|gb|ACS62822.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia
pickettii 12D]
gi|308919292|gb|EFP64958.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ralstonia sp.
5_7_47FAA]
gi|348611501|gb|EGY61146.1| ATP-dependent Clp protease proteolytic subunit [Ralstonia sp.
5_2_56FAA]
Length = 215
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ERVIF+ ++++ +N ++A +L+L+S + K
Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERVIFMVGEVNDQTANLVVAQLLFLESENPDKD 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LA+YDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 82 ISLYINSPGGSVSSGLAMYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRLALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P G ARGQA DI +A E+L +R+ + LS TGQP +KI +D R S++
Sbjct: 142 IMIHQPLGGARGQASDIEIQAREILYLRERLNTVLSEVTGQPVDKIARDTDRDNFMSSEQ 201
Query: 250 ALEYGLIDRII 260
A EYGLID++I
Sbjct: 202 AKEYGLIDQVI 212
>gi|374411856|gb|AEZ48913.1| clp protease proteolytic subunit, partial [Belosynapsis ciliata]
Length = 195
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 120/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYRER++F+GQ +D E SNQ++ M+YL +D+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDV-NRLYRERLLFLGQEVDSEISNQLVGLMVYLSIENDT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T CVG A + +L GG R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDTMQFVPPDVHTVCVGMAASMGSIILVGGAITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + +TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTSIYVERTGKPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 AIEAQAHGIVDLV 192
>gi|436842089|ref|YP_007326467.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432170995|emb|CCO24366.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 202
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
GT ++ T G + D+++ L ++R+I + +++ ++ I A +L+L+S D K +
Sbjct: 3 GTIPIVIETTGRTERAY-DIYSRLLKDRIILLSGEVNDHVASVICAQLLFLESEDPEKEI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT +AIYDTMQ + +PV T C+G A + FLL+ GEKG+R ++P SRI
Sbjct: 62 YMYINSPGGVVTAGMAIYDTMQYISAPVSTLCMGQAASMGAFLLSAGEKGHRYSLPHSRI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA DI +A E+LR++ + ++ TG+ E++ KD R + EA
Sbjct: 122 LIHQPLGGAQGQATDIGIQAKEILRLKKSLNSIMAANTGKSLEEVEKDTDRDYFMSAAEA 181
Query: 251 LEYGLIDRIIR 261
+EYGLID+I++
Sbjct: 182 VEYGLIDKILK 192
>gi|425445342|ref|ZP_18825374.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425453823|ref|ZP_18833576.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389734665|emb|CCI01691.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389800128|emb|CCI20438.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
Length = 233
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 113/179 (63%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D++ ++ I+A +LYL++ D K + +YIN PGG V LAIY
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIY 106
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL GG G R ++P SRI + P G A+GQA DI
Sbjct: 107 DTMQQIRPHVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASDIAI 166
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E+L ++ + L+ TGQP+++I D R + EA EYGLID++I P + +
Sbjct: 167 QAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDQVISRPELPD 225
>gi|400288463|ref|ZP_10790495.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter sp.
PAMC 21119]
Length = 215
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 127/197 (64%), Gaps = 6/197 (3%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE S+ D+++ L RERVIF+ +++ +N I+A +L+L++ + K +
Sbjct: 22 VPMVVEQSARGERSF---DIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAENPDKDI 78
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LAI+DTM +K V T C+G AY + FLLA GEKG R A+ +R+
Sbjct: 79 HLYINSPGGSVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYALANARV 138
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI A E+L+ R + K L+ +TGQP EKI KD+ R ++EA
Sbjct: 139 MIHQPSGGAQGQATDIEINAREILKTRARLNKILAERTGQPVEKIEKDVERDYWLDAEEA 198
Query: 251 LEYGLIDRII--RPPRI 265
EYGL+D ++ RP +
Sbjct: 199 KEYGLVDAVLERRPASL 215
>gi|206901598|ref|YP_002250810.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
gi|206740701|gb|ACI19759.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
thermophilum H-6-12]
Length = 194
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 122/191 (63%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L + R++F+G I++E +N ++A +L+L+S D K +
Sbjct: 3 VPIVIEQTPRGERAY---DIYSRLLKSRIVFLGTAINDEVANLVVAQLLFLESEDPEKDI 59
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG+V+ LAIYDTM+ +K V T CVG A +A LLA G+KG R A+P SR+
Sbjct: 60 YLYINSPGGEVSAGLAIYDTMRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRV 119
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A G A DI E+L+++ + + L+ TGQP EKI +D R + EA
Sbjct: 120 MIHQPLGGAYGPAADIEIHTREILKIKRVLNEILAHHTGQPIEKIERDTDRDFFMSAYEA 179
Query: 251 LEYGLIDRIIR 261
EYG++D ++
Sbjct: 180 KEYGIVDEVLE 190
>gi|402814642|ref|ZP_10864236.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
gi|402508489|gb|EJW19010.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
alvei DSM 29]
Length = 193
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G +++ +N I+A +L+L + D K +
Sbjct: 4 VPVVVEQTNRGERSY---DIYSRLLKDRIIFLGTEVNDLVANSIIAQLLFLAADDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG ++ +AIYDTMQ +K V T CVG A + FLL G KG R A+P S I
Sbjct: 61 HLYINSPGGSISAGMAIYDTMQHIKPDVSTICVGMAASMGAFLLNAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA DI A +L++RD + K L+ +TGQP E++ +D R +QEA
Sbjct: 121 MIHQPLGGAQGQATDIEIRARRILKMRDNLNKILAERTGQPLERVERDTDRDYFMSAQEA 180
Query: 251 LEYGLIDRII 260
+YGL+D+++
Sbjct: 181 FDYGLVDKVL 190
>gi|218440358|ref|YP_002378687.1| ATP-dependent Clp protease proteolytic subunit ClpP [Cyanothece sp.
PCC 7424]
gi|218173086|gb|ACK71819.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7424]
Length = 203
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 119/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ + G G + D+++ L R+R++F+GQ + + +N I+A +L+L+S D K +Y+
Sbjct: 3 PTVI-ESSGRGERAF-DIYSRLLRDRIVFLGQEVTNDLANTIVAQLLFLESEDPDKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL G K R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLCAGAKDKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ +TGQP EKI +D R ++EA E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNQHLASRTGQPLEKIAEDTERDFFMSAEEAQE 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|18203597|sp|Q9X5N0.1|CLPP2_MYXXA RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|4838463|gb|AAD31002.1|AF127082_1 ATP-dependent protease proteolytic subunit ClpP [Myxococcus xanthus
DZF1]
Length = 206
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/199 (42%), Positives = 123/199 (61%), Gaps = 6/199 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+ + L ++R++ +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIISRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T CVG A + LL G KG R A+P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G RGQA DI +A E+LR++ + + + + TGQ E++ KD R G
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMG 178
Query: 247 SQEALEYGLIDRIIRPPRI 265
+ EA YG+ID I P ++
Sbjct: 179 ASEAKAYGIIDEIQNPRKV 197
>gi|425465976|ref|ZP_18845279.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|389831694|emb|CCI25350.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
Length = 233
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 113/179 (63%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D++ ++ I+A +LYL++ D K + +YIN PGG V LAIY
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIY 106
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL GG G R ++P SRI + P G A+GQA DI
Sbjct: 107 DTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASDIAI 166
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E+L ++ + L+ TGQP+++I D R + EA EYGLID++I P + +
Sbjct: 167 QAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDQVISRPELPD 225
>gi|393776900|ref|ZP_10365194.1| ClpP protein [Ralstonia sp. PBA]
gi|392716257|gb|EIZ03837.1| ClpP protein [Ralstonia sp. PBA]
Length = 217
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ERV+F+ ++++ +N ++A +L+L+S + K
Sbjct: 23 LGLVPMVVEQSGRGERAF-DIYSRLLKERVVFLVGEVNDQTANLVVAQLLFLESENPDKD 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 82 ISLYINSPGGSVSAGLAIYDTMQFIKPDVSTLCMGMAASMGAFLLAAGAKGKRFALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P G ARGQA DI +A E+L +R+ + + LS TGQP EKI +D R + +
Sbjct: 142 IMIHQPLGGARGQASDIEIQAREILYLRERLNQILSDVTGQPVEKIARDTDRDNFMSADQ 201
Query: 250 ALEYGLIDRII 260
A+EYGLID+ I
Sbjct: 202 AVEYGLIDKAI 212
>gi|113953857|ref|YP_729303.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CC9311]
gi|113881208|gb|ABI46166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechococcus
sp. CC9311]
Length = 229
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 83/215 (38%), Positives = 129/215 (60%), Gaps = 2/215 (0%)
Query: 46 RVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQN 105
R H + + R P+ G P V+ ++ G G + D+++ L RER+IF+G +
Sbjct: 5 RSHHPIENRWRGTLPVSAHTPHASPGVPTVVEQS-GRGERSF-DIYSRLLRERIIFLGTD 62
Query: 106 IDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGF 165
++++ ++ ++A +L+L++ D K + +YIN PGG +T LAIYDTMQ + V T C G
Sbjct: 63 VNDQVADALVAQLLFLEAEDPEKDIQVYINSPGGSITAGLAIYDTMQQVAPDVVTICYGL 122
Query: 166 AYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELS 225
A + FLL+GG KG R A+P +RI + P G A+GQA DI A E+L +++ + ++
Sbjct: 123 AASMGAFLLSGGCKGKRLALPNARIMIHQPLGGAQGQAVDIEIMAQEILFLKETLNGLMA 182
Query: 226 RKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
TGQP KIT+D R EA+EYGLIDR++
Sbjct: 183 DHTGQPLAKITEDTERDYFLSPAEAVEYGLIDRVV 217
>gi|354586092|ref|ZP_09004765.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
gi|353183068|gb|EHB48600.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
lactis 154]
Length = 198
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 74/172 (43%), Positives = 114/172 (66%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ++++ +N I+A ML+L + D K +++YIN PGG +T +AI+
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPGGSITAGMAIF 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + FLL G KG R A+P S I + P G A+GQA DI
Sbjct: 79 DTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYALPNSEIMIHQPLGGAQGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A +L++RD + + L+ +TGQP E+I KD R ++EA EYGL+D+++
Sbjct: 139 RARRILKMRDKLNRILAERTGQPLERIEKDTDRDYFMTAEEAKEYGLVDQVL 190
>gi|70727122|ref|YP_254036.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
haemolyticus JCSC1435]
gi|124013829|sp|Q4L4J5.1|CLPP_STAHJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|68447846|dbj|BAE05430.1| clpP [Staphylococcus haemolyticus JCSC1435]
Length = 195
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + K L+ +TGQ EKI KD R + EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNKILAERTGQSIEKIQKDTDRDNFLTADEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID +++P
Sbjct: 182 EYGLIDNVMQP 192
>gi|148223587|ref|NP_001088816.1| ClpP caseinolytic peptidase, ATP-dependent, proteolytic subunit
homolog [Xenopus laevis]
gi|76779451|gb|AAI06237.1| LOC496087 protein [Xenopus laevis]
Length = 247
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 87/232 (37%), Positives = 134/232 (57%), Gaps = 4/232 (1%)
Query: 42 EFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTP--KVLYRTPGEGSWQWVDLWNALYRERV 99
E + R + L GIR +R PI +P ++ G G + D+++ L RER+
Sbjct: 2 ELFVRGTRPLLKGIRALTQLRNVHCSPPILSPLIPIVVEQTGRGERAY-DIYSRLLRERI 60
Query: 100 IFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVG 159
I + ID+ S+ ++A +L+L S + K ++MYIN PGG VT LAIYDTMQ + +P+
Sbjct: 61 ICVMGPIDDSLSSVVVAQLLFLQSESNKKPIHMYINSPGGSVTAGLAIYDTMQYILNPIC 120
Query: 160 THCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDY 219
T CVG A + LLA G G R ++P SRI + P+G ARGQA DI +A+E+L+++
Sbjct: 121 TWCVGQAASMGSLLLAAGSSGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEILKLKKQ 180
Query: 220 IFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI-IRPPRIKEDMP 270
I + ++ T QP I + R + EA E+G++D++ + PP+ ED P
Sbjct: 181 INEIYAKHTRQPLSVIESVMERDRYMSPTEAQEFGILDKVLVHPPQDGEDEP 232
>gi|217967475|ref|YP_002352981.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
gi|217336574|gb|ACK42367.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Dictyoglomus
turgidum DSM 6724]
Length = 194
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 123/194 (63%), Gaps = 4/194 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L + R++F+G I++E +N I+A +L+L+S D K +
Sbjct: 3 VPIVIEQTPRGERAY---DIYSRLLKSRIVFLGTTINDEVANLIVAQLLFLESEDPEKDI 59
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG+V+ LAIYDT++ +K V T CVG A +A LLA G+KG R A+P SR+
Sbjct: 60 YLYINSPGGEVSAGLAIYDTIRHIKPKVATVCVGQAASMAAILLAAGDKGKRYALPHSRV 119
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A G A DI E+L+++ + + L+ TGQP EKI KD R + EA
Sbjct: 120 MIHQPLGGAYGPAADIEIHTREILKIKRVLNEILAYHTGQPIEKIEKDTDRDFFMSAYEA 179
Query: 251 LEYGLIDRIIRPPR 264
EYG++D ++ +
Sbjct: 180 KEYGIVDEVLESKK 193
>gi|194033171|ref|YP_002000510.1| ATP-dependent Clp protease proteolytic subunit [Brachypodium
distachyon]
gi|357111644|ref|XP_003557622.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-like
[Brachypodium distachyon]
gi|357166335|ref|XP_003580676.1| PREDICTED: ATP-dependent Clp protease proteolytic subunit-like
[Brachypodium distachyon]
gi|193075579|gb|ACF08662.1| ATP-dependent protease proteolytic subunit (chloroplast)
[Brachypodium distachyon]
Length = 216
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV Y+ PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYQIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|313184018|ref|YP_004021175.1| clp protease proteolytic subunit [Castanea mollissima]
gi|309321545|gb|ADO65085.1| clp protease proteolytic subunit [Castanea mollissima]
Length = 196
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 81/194 (41%), Positives = 121/194 (62%), Gaps = 3/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N LYR R++F+GQ +D + SNQI+ M+YL DDS
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDI-NRLYRARLLFLGQEVDSDLSNQIIGLMVYLSLEDDS 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + FLL GGE R A P
Sbjct: 60 KDLYLFINSPGGWVIPGVAIYDTMQFVQPDVQTICMGLAASIGSFLLVGGEITKRLAFPH 119
Query: 188 S-RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+ R+ + PA + A + EA+E++++R+ I ++TG P +++D+ R
Sbjct: 120 ARRVMIHQPASSFYEAPAGEFILEAEEMMKLRETITGVYVQRTGTPLWVVSEDMERDVFM 179
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 SATEAQAHGIVDHV 193
>gi|442805909|ref|YP_007374058.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741759|gb|AGC69448.1| ATP-dependent Clp protease proteolytic subunit ClpP [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 193
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/194 (42%), Positives = 125/194 (64%), Gaps = 5/194 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ ++ GE S+ D+++ L +R+IF+ +++ ++ I+A ML+LD+ D
Sbjct: 1 MPL-IPYVIEQSNRGERSY---DIYSRLLEDRIIFLSDEVNDATASLIVAQMLFLDAKDP 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + YIN PGG VT LAIYDTMQ +K+ V T CVG A + FLLA G KG R A+P
Sbjct: 57 DKDIQFYINSPGGSVTAGLAIYDTMQHVKADVSTICVGMAASMGAFLLAAGTKGKRFALP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
S I + PAG A+G A DI+ A+ +L+++D + + L+ KTGQP EKI +D+ R
Sbjct: 117 NSTIMIHQPAGGAKGPATDIKIHAEWILKIKDNLNRILAEKTGQPLEKIQRDVERDYFMS 176
Query: 247 SQEALEYGLIDRII 260
+ EA EYG++D ++
Sbjct: 177 AWEAKEYGIVDEVM 190
>gi|317968359|ref|ZP_07969749.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
sp. CB0205]
Length = 194
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 113/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G ID++ ++ ++A +L+L++ D K + +Y+N PGG VT LAIY
Sbjct: 17 DIYSRLLRERIIFLGSGIDDQVADAMVAQLLFLEAEDPEKDIQIYVNSPGGSVTAGLAIY 76
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ + V T C G A + FLL+GG KG R A+P +RI + P G A+GQA DI
Sbjct: 77 DTMQQVAPDVVTICYGLAASMGAFLLSGGTKGKRLALPNARIMIHQPLGGAQGQAVDIEI 136
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L +++ + +S TGQP EKI +D R EA++YGLIDR++
Sbjct: 137 QAKEILYLKETLNGLMSEHTGQPLEKIAEDTDRDYFLSPAEAVQYGLIDRVV 188
>gi|297531315|ref|YP_003672590.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
gi|297254567|gb|ADI28013.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. C56-T3]
Length = 196
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R++F+G ID++ +N I++ +L+L + D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T LAIYDTMQ +K V T C+G A + FLLA G KG R A+P S I
Sbjct: 62 LYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + + LS TGQP E I +D R +Q+A+
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAM 181
Query: 252 EYGLIDRII 260
EYG+IDR++
Sbjct: 182 EYGIIDRVL 190
>gi|261404070|ref|YP_003240311.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|329927993|ref|ZP_08281997.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
gi|261280533|gb|ACX62504.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. Y412MC10]
gi|328938097|gb|EGG34494.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF5]
Length = 198
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ++++ +N I+A ML+L + D K +++YIN PGG +T +AI+
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPGGSITAGMAIF 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + FLL G KG R +P S I + P G A+GQA DI
Sbjct: 79 DTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEIMIHQPLGGAQGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR--PPR 264
A +L++RD + + LS +TGQP E+I KD R + EA EYGLID+++ PP+
Sbjct: 139 RARRILKMRDKLNRILSERTGQPLERIEKDTDRDYFMTADEAKEYGLIDQVLENTPPQ 196
>gi|33240370|ref|NP_875312.1| ATP-dependent Clp protease proteolytic subunit [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
gi|67460522|sp|Q7VC22.1|CLPP1_PROMA RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|33237897|gb|AAP99964.1| Protease subunit of ATP-dependent Clp protease [Prochlorococcus
marinus subsp. marinus str. CCMP1375]
Length = 196
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 119/194 (61%), Gaps = 6/194 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER++F+G+ + + +N+I+A +L+L++ D
Sbjct: 1 MIPI-----VVEETGRGERAF-DIYSRLLRERIVFLGEQVTNDSANRIVAQLLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +++YIN PGG V I+DT+Q +K V T CVG A + FLL G KG RS++
Sbjct: 55 EKDIFLYINSPGGSVYDGFGIFDTIQHIKPDVHTVCVGLAASMGAFLLCAGAKGKRSSLQ 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G ARGQA DIR +ADE+L ++ + ELS +TGQP KI +D R
Sbjct: 115 HSRIMIHQPLGGARGQATDIRIQADEILFLKQKLNTELSNRTGQPLSKIAEDTDRDFYMS 174
Query: 247 SQEALEYGLIDRII 260
EA+ YG+ID ++
Sbjct: 175 PSEAISYGIIDNVL 188
>gi|418911445|ref|ZP_13465428.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
gi|377724823|gb|EHT48938.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus CIG547]
Length = 195
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + LS +TGQ EKI KD R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNHILSERTGQSIEKIQKDTDRDNFLTAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 182 EYGLIDEVMVP 192
>gi|227824397|ref|ZP_03989229.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|352683492|ref|YP_004895475.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
gi|226904896|gb|EEH90814.1| ATP-dependent Clp protease [Acidaminococcus sp. D21]
gi|350278145|gb|AEQ21335.1| ATP-dependent Clp protease [Acidaminococcus intestini RyC-MR95]
Length = 199
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 83/200 (41%), Positives = 124/200 (62%), Gaps = 6/200 (3%)
Query: 64 RIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDS 123
R++ +PI + + GE S+ D+++ L ++R+IF+ I++ +N I+A +L+L+S
Sbjct: 3 RVSYVPIVVEQT---SKGERSY---DIYSRLLKDRIIFVTGEIEDHMANLIVAQLLFLES 56
Query: 124 VDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRS 183
D K +++YIN PGG V+ LAIYDTMQ ++ V T CVG A +A LLA G KG R
Sbjct: 57 EDPDKDIHLYINSPGGSVSAGLAIYDTMQYIRPDVSTICVGMAASMASILLAAGAKGKRF 116
Query: 184 AMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIK 243
A+P SR+ + P G A+GQA DI A E+LRVR+ + + L+ TG+ E I D R
Sbjct: 117 ALPHSRVMIHQPLGGAQGQATDIEIHAREILRVREEMNQILAAHTGKDPETIKLDTERDH 176
Query: 244 RFGSQEALEYGLIDRIIRPP 263
+ EAL YGLID+++ P
Sbjct: 177 YLTADEALSYGLIDQVVASP 196
>gi|427728056|ref|YP_007074293.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
gi|427363975|gb|AFY46696.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Nostoc sp.
PCC 7524]
Length = 203
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 115/189 (60%), Gaps = 1/189 (0%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
T ++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +Y
Sbjct: 2 TIPIVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI
Sbjct: 61 LYINSPGGSVTAGMGIFDTMKQIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI +A E+L + + L+ TGQP E+I +D R EA
Sbjct: 121 IHQPLGGAQGQATDIEIQAREILYHKKRLNDYLAEHTGQPIERIAEDTERDFFMSPDEAK 180
Query: 252 EYGLIDRII 260
EYGLID++I
Sbjct: 181 EYGLIDQVI 189
>gi|430751620|ref|YP_007214528.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
gi|430735585|gb|AGA59530.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermobacillus composti KWC4]
Length = 195
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE ++ D+++ L ++R+IF+G I++ +N ++A ML+L + D K +
Sbjct: 6 VPMVIEQSSRGERAY---DIYSRLLKDRIIFLGTPINDVVANSVIAQMLFLAADDPEKDI 62
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG +T +AIYDTMQ +K V T CVG A + FLLA G G R A+P S +
Sbjct: 63 HLYINSPGGSITSGMAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAPGKRYALPNSEV 122
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A GQA DI A +L++RD + K LS +TGQP E+I KD R ++EA
Sbjct: 123 MIHQPLGGAEGQASDIEIRARRILKMRDKLNKILSERTGQPLERIEKDTDRDYFMSAEEA 182
Query: 251 LEYGLIDRII 260
YGL+D++I
Sbjct: 183 KNYGLVDKVI 192
>gi|67924586|ref|ZP_00518001.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|416404722|ref|ZP_11687744.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
gi|67853560|gb|EAM48904.1| Peptidase S14, ClpP [Crocosphaera watsonii WH 8501]
gi|357261483|gb|EHJ10747.1| ATP-dependent Clp protease proteolytic subunit [Crocosphaera
watsonii WH 0003]
Length = 202
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/188 (42%), Positives = 119/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E SN I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPDKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGTKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + L+ T QP +KI +D R ++EA E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKGLLNNHLASHTEQPLDKIAEDTERDFFMSAEEAQE 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|387928693|ref|ZP_10131371.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus PB1]
gi|387588279|gb|EIJ80601.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus PB1]
Length = 201
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/189 (43%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L++ + K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGTPIDDYVANSIVAQLLFLEAENPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K LS +TGQP E I KD R +Q+AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLRDKLNKILSERTGQPVEVIAKDTDRDNFMTAQQAL 181
Query: 252 EYGLIDRII 260
EYGL+D II
Sbjct: 182 EYGLVDHII 190
>gi|333361419|pdb|3QWD|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361420|pdb|3QWD|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361421|pdb|3QWD|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361422|pdb|3QWD|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361423|pdb|3QWD|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361424|pdb|3QWD|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361425|pdb|3QWD|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361426|pdb|3QWD|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361427|pdb|3QWD|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361428|pdb|3QWD|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361429|pdb|3QWD|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361430|pdb|3QWD|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361431|pdb|3QWD|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|333361432|pdb|3QWD|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus
gi|374977802|pdb|3V5E|A Chain A, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977803|pdb|3V5E|B Chain B, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977804|pdb|3V5E|C Chain C, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977805|pdb|3V5E|D Chain D, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977806|pdb|3V5E|E Chain E, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977807|pdb|3V5E|F Chain F, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977808|pdb|3V5E|G Chain G, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977809|pdb|3V5E|H Chain H, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977810|pdb|3V5E|I Chain I, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977811|pdb|3V5E|J Chain J, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977812|pdb|3V5E|K Chain K, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977813|pdb|3V5E|L Chain L, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977814|pdb|3V5E|M Chain M, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
gi|374977815|pdb|3V5E|N Chain N, Crystal Structure Of Clpp From Staphylococcus Aureus In
The Active, Extended Conformation
Length = 203
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 182 EYGLIDEVMVP 192
>gi|405365022|ref|ZP_11026468.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397089587|gb|EJJ20496.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 206
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 123/199 (61%), Gaps = 6/199 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R++ +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANVIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K PV T CVG A + LL G KG R A+P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKCPVSTICVGQAASMGAVLLLAGAKGKRYALP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G RGQA DI +A E+LR++ + + + + T Q E++ KD R G
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTAQSIERVEKDTDRDYFMG 178
Query: 247 SQEALEYGLIDRIIRPPRI 265
+ EA YG+ID I P ++
Sbjct: 179 ASEAKAYGIIDEIQNPRKV 197
>gi|167624686|ref|YP_001674980.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
halifaxensis HAW-EB4]
gi|189082465|sp|B0TLU9.1|CLPP_SHEHH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167354708|gb|ABZ77321.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
halifaxensis HAW-EB4]
Length = 203
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG +G R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +++ + L+ TGQP E I +D R + EA
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDRDNFMSATEA 189
Query: 251 LEYGLIDRII 260
EYGL+D +I
Sbjct: 190 AEYGLVDSVI 199
>gi|127513436|ref|YP_001094633.1| ATP-dependent Clp protease proteolytic subunit [Shewanella loihica
PV-4]
gi|171855248|sp|A3QFX6.1|CLPP_SHELP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|126638731|gb|ABO24374.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
loihica PV-4]
Length = 203
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 118/190 (62%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG KG R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +++ + + L+ TGQP E I +D R + EA
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATEA 189
Query: 251 LEYGLIDRII 260
EYGL+D ++
Sbjct: 190 AEYGLVDSVL 199
>gi|255994401|ref|ZP_05427536.1| Clp protease [Eubacterium saphenum ATCC 49989]
gi|255993114|gb|EEU03203.1| Clp protease [Eubacterium saphenum ATCC 49989]
Length = 196
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 122/191 (63%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
TP V+ + GE S+ D+++ L R+R+IFIG+ I+ ++ I+A +L+L++ D SK +
Sbjct: 4 TPIVIEKDGSGERSF---DIYSRLLRDRIIFIGEPIESNMASSIIAQLLFLEAEDSSKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGGDVT LAIYDTMQ +K V T CVG A +A LL GEKG R A+P S I
Sbjct: 61 CIYINSPGGDVTSGLAIYDTMQFIKPQVQTVCVGMAASMAAVLLLAGEKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A GQA +I+ A+ +++ RD + + +S+ T + I +D R K + EA
Sbjct: 121 MIHQPMGGASGQASEIKIAAEHIIKTRDKLNRLISKHTTKNLSTIEEDTDRDKYMTANEA 180
Query: 251 LEYGLIDRIIR 261
L+YG+ID +++
Sbjct: 181 LDYGIIDSVLK 191
>gi|27467469|ref|NP_764106.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57866412|ref|YP_188029.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis RP62A]
gi|242242138|ref|ZP_04796583.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251810202|ref|ZP_04824675.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|282875651|ref|ZP_06284522.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|293368230|ref|ZP_06614859.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|416124873|ref|ZP_11595668.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|417647658|ref|ZP_12297492.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|417656247|ref|ZP_12305934.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|417658376|ref|ZP_12308010.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|417910192|ref|ZP_12553919.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|417911815|ref|ZP_12555515.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|417914206|ref|ZP_12557859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|418326030|ref|ZP_12937226.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|418329732|ref|ZP_12940785.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|418411293|ref|ZP_12984561.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
gi|418604876|ref|ZP_13168211.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|418608483|ref|ZP_13171678.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|418608689|ref|ZP_13171871.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|418611518|ref|ZP_13174598.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|418614099|ref|ZP_13177086.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|418618003|ref|ZP_13180887.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|418622588|ref|ZP_13185333.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|418623648|ref|ZP_13186350.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|418626020|ref|ZP_13188648.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|418629665|ref|ZP_13192161.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|418633713|ref|ZP_13196119.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|418665858|ref|ZP_13227295.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|419768236|ref|ZP_14294368.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|419771145|ref|ZP_14297205.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|420162870|ref|ZP_14669625.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|420166724|ref|ZP_14673405.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|420167312|ref|ZP_14673973.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|420171404|ref|ZP_14677946.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|420172098|ref|ZP_14678613.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|420175404|ref|ZP_14681842.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|420176672|ref|ZP_14683079.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|420180409|ref|ZP_14686641.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|420182492|ref|ZP_14688628.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|420185937|ref|ZP_14692013.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|420187913|ref|ZP_14693928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|420189984|ref|ZP_14695932.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|420193132|ref|ZP_14698987.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|420195431|ref|ZP_14701223.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|420197784|ref|ZP_14703505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|420199727|ref|ZP_14705398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|420201234|ref|ZP_14706859.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|420203772|ref|ZP_14709333.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|420206801|ref|ZP_14712306.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|420208208|ref|ZP_14713678.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|420212385|ref|ZP_14717736.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|420213579|ref|ZP_14718885.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|420216619|ref|ZP_14721823.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|420219555|ref|ZP_14724570.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|420222322|ref|ZP_14727243.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|420225248|ref|ZP_14730082.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|420226678|ref|ZP_14731457.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|420228998|ref|ZP_14733709.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|420231355|ref|ZP_14736007.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|420233994|ref|ZP_14738568.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|421607631|ref|ZP_16048869.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|38257586|sp|Q8CTE0.1|CLPP_STAES RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|67460168|sp|Q5HQW0.1|CLPP_STAEQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|27315012|gb|AAO04148.1|AE016745_247 ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis ATCC 12228]
gi|57637070|gb|AAW53858.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis RP62A]
gi|242234451|gb|EES36763.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis W23144]
gi|251806254|gb|EES58911.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BCM-HMP0060]
gi|281295678|gb|EFA88201.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis SK135]
gi|291317653|gb|EFE58070.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis M23864:W2(grey)]
gi|319401155|gb|EFV89370.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis FRI909]
gi|329723271|gb|EGG59801.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU144]
gi|329736698|gb|EGG72963.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU028]
gi|329738003|gb|EGG74227.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU045]
gi|341651029|gb|EGS74836.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU037]
gi|341652326|gb|EGS76115.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU105]
gi|341653290|gb|EGS77061.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU109]
gi|365226941|gb|EHM68152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU071]
gi|365229855|gb|EHM70983.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis 14.1.R1.SE]
gi|374401382|gb|EHQ72456.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU057]
gi|374403769|gb|EHQ74765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU041]
gi|374407975|gb|EHQ78819.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU081]
gi|374409868|gb|EHQ80637.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU065]
gi|374817066|gb|EHR81256.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU120]
gi|374821672|gb|EHR85724.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU118]
gi|374822416|gb|EHR86438.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU117]
gi|374826344|gb|EHR90243.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU123]
gi|374829958|gb|EHR93749.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU125]
gi|374833196|gb|EHR96891.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU127]
gi|374834043|gb|EHR97705.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU126]
gi|374838660|gb|EHS02198.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU129]
gi|383360447|gb|EID37843.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-250]
gi|383362116|gb|EID39473.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus aureus subsp. aureus IS-K]
gi|394233097|gb|EJD78707.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM088]
gi|394235867|gb|EJD81417.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM095]
gi|394238050|gb|EJD83534.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM070]
gi|394238941|gb|EJD84398.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM087]
gi|394243339|gb|EJD88705.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM061]
gi|394243569|gb|EJD88931.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM067]
gi|394250037|gb|EJD95239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM049]
gi|394250752|gb|EJD95922.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM053]
gi|394252238|gb|EJD97276.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM057]
gi|394253029|gb|EJD98045.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM040]
gi|394255555|gb|EJE00504.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM039]
gi|394259277|gb|EJE04135.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM037]
gi|394260255|gb|EJE05070.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM023]
gi|394263226|gb|EJE07965.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM021]
gi|394265370|gb|EJE10027.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM020]
gi|394271477|gb|EJE15970.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM031]
gi|394273140|gb|EJE17575.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM018]
gi|394274354|gb|EJE18775.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM015]
gi|394276904|gb|EJE21237.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM008]
gi|394279819|gb|EJE24116.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM001]
gi|394282082|gb|EJE26294.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIHLM003]
gi|394285155|gb|EJE29239.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05005]
gi|394288813|gb|EJE32713.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04008]
gi|394289374|gb|EJE33258.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH08001]
gi|394291646|gb|EJE35441.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05001]
gi|394293803|gb|EJE37505.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH06004]
gi|394298294|gb|EJE41871.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH05003]
gi|394299681|gb|EJE43216.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH04003]
gi|394302921|gb|EJE46355.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051668]
gi|394304687|gb|EJE48083.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus epidermidis NIH051475]
gi|406656682|gb|EKC83083.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis AU12-03]
gi|410892837|gb|EKS40628.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
epidermidis BVS058A4]
Length = 194
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI +D R + EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAK 181
Query: 252 EYGLIDRIIRPPR 264
EYGLID ++ P +
Sbjct: 182 EYGLIDEVMEPEK 194
>gi|442319289|ref|YP_007359310.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
gi|441486931|gb|AGC43626.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus
stipitatus DSM 14675]
Length = 206
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 124/199 (62%), Gaps = 6/199 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R+I +G ID++ +N I+A +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIIMLGTEIDDDVANVIVAQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT +AIYDTMQ +K PV T CVG A + LL G KG R A+P
Sbjct: 59 DKDINIYINSPGGSVTAGMAIYDTMQYVKPPVSTICVGQAASMGAVLLLAGTKGKRYALP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G RGQA DI +A E+LR++ + + + + TGQ E++ KD R G
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMKAKLNELIVKHTGQSIERVEKDTDRDYFMG 178
Query: 247 SQEALEYGLIDRIIRPPRI 265
+ EA YG++D I P ++
Sbjct: 179 ATEAKAYGIVDEIQNPRKV 197
>gi|222150769|ref|YP_002559922.1| ATP-dependent Clp protease proteolytic subunit [Macrococcus
caseolyticus JCSC5402]
gi|254763793|sp|B9EAG5.1|CLPP_MACCJ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|222119891|dbj|BAH17226.1| ATP-dependent protease proteolytic subunit ClpP [Macrococcus
caseolyticus JCSC5402]
Length = 194
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 118/191 (61%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIESTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGMAIYDTMQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L+ R+ + + L+ +TGQP EKI KD R + EA
Sbjct: 122 IHQPLGGAQGQATEIEIAARHILKTREKLNRILAERTGQPIEKIEKDTDRDNFLTADEAK 181
Query: 252 EYGLIDRIIRP 262
YGLID ++ P
Sbjct: 182 AYGLIDEVMHP 192
>gi|157693854|ref|YP_001488316.1| ATP-dependent Clp protease proteolytic subunit [Bacillus pumilus
SAFR-032]
gi|389574748|ref|ZP_10164807.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. M 2-6]
gi|167008647|sp|A8FHN9.1|CLPP_BACP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157682612|gb|ABV63756.1| S14 family endopeptidase ClpP [Bacillus pumilus SAFR-032]
gi|388425674|gb|EIL83500.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. M 2-6]
Length = 198
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + + L+ +TGQP E I +D R ++EAL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQPIEVIERDTDRDNFKTAEEAL 181
Query: 252 EYGLIDRII 260
+YGLID+++
Sbjct: 182 QYGLIDKVL 190
>gi|56421597|ref|YP_148915.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
kaustophilus HTA426]
gi|261420500|ref|YP_003254182.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
Y412MC61]
gi|319768169|ref|YP_004133670.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
gi|375010197|ref|YP_004983830.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|448239320|ref|YP_007403378.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
GHH01]
gi|67460172|sp|Q5KVD9.1|CLPP_GEOKA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|56381439|dbj|BAD77347.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Geobacillus kaustophilus HTA426]
gi|261376957|gb|ACX79700.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC61]
gi|317113035|gb|ADU95527.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacillus
sp. Y412MC52]
gi|359289046|gb|AEV20730.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus
thermoleovorans CCB_US3_UF5]
gi|445208162|gb|AGE23627.1| ATP-dependent Clp protease proteolytic subunit [Geobacillus sp.
GHH01]
Length = 196
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R++F+G ID++ +N I++ +L+L + D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIVFLGSPIDDQVANSIVSQLLFLAAEDPDKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T LAIYDTMQ +K V T C+G A + FLLA G KG R A+P S I
Sbjct: 62 LYINSPGGSITAGLAIYDTMQFIKPDVSTICIGMAASMGAFLLAAGAKGKRFALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + + LS TGQP E I +D R +Q+A+
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLRDKLNRILSENTGQPIEVIERDTDRDNFMTAQKAM 181
Query: 252 EYGLIDRII 260
EYG+IDR++
Sbjct: 182 EYGIIDRVL 190
>gi|229577779|ref|YP_002836115.1| clp protease proteolytic subunit [Megaleranthis saniculifolia]
gi|226933907|gb|ACO92040.1| clp protease proteolytic subunit [Megaleranthis saniculifolia]
Length = 201
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++ L+RER++F+GQ +D E SNQ++ M+YL D+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYR-LHRERLLFLGQEVDSEISNQLIGLMVYLSIEDEI 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGVAIYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|386813684|ref|ZP_10100908.1| ATP-dependent Clp protease proteolytic subunit ClpP [planctomycete
KSU-1]
gi|386403181|dbj|GAB63789.1| ATP-dependent Clp protease proteolytic subunit ClpP [planctomycete
KSU-1]
Length = 222
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 123/197 (62%), Gaps = 2/197 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IFIG I++ SN ++A +L+L + + ++ +
Sbjct: 28 VPYVIEKT-GYGERHY-DIFSRLLKDRIIFIGSAIEDTLSNLVIAQILFLQNENKNQDIN 85
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T LAIYDTMQ ++ V T C+G A+ +A LLA G KG R +P +RI
Sbjct: 86 IYINSPGGSITAGLAIYDTMQFVQCDVATFCIGQAFSMAAILLAAGTKGKRYGLPHTRIM 145
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
L P G RG A DI +A+E+LR++ Y+ + L + GQP E++ D+ R S EA
Sbjct: 146 LHQPWGGMRGTATDISIQAEEILRMKKYLNEILVKHAGQPIERVEADVDRDFYMSSHEAK 205
Query: 252 EYGLIDRIIRPPRIKED 268
YGLID +I R K++
Sbjct: 206 AYGLIDEVIESLRDKKN 222
>gi|108757731|ref|YP_634562.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus xanthus
DK 1622]
gi|3023519|sp|O30612.1|CLPP2_MYXXD RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|2384690|gb|AAB97819.1| proteosome major subunit [Myxococcus xanthus DK 1622]
gi|108461611|gb|ABF86796.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Myxococcus
xanthus DK 1622]
Length = 203
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 114/182 (62%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L ++R+I +G ++++ +N I+A +L+L+S D K + +YIN PGG VT LAIY
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T CVG A + LL G KG R A+P SRI + P G A+GQA DI
Sbjct: 78 DTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATDIDI 137
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+LR+R YI + + TG E+I KD R +++A +YGLID ++ R+
Sbjct: 138 QAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQYGLIDEVVEKQRVIAP 197
Query: 269 MP 270
P
Sbjct: 198 TP 199
>gi|157962502|ref|YP_001502536.1| ATP-dependent Clp protease proteolytic subunit [Shewanella pealeana
ATCC 700345]
gi|189082466|sp|A8H614.1|CLPP_SHEPA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157847502|gb|ABV88001.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
pealeana ATCC 700345]
Length = 203
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 117/190 (61%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG +G R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +++ + L+ TGQP E I +D R + EA
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPLEVIERDTDRDNFMSATEA 189
Query: 251 LEYGLIDRII 260
EYGL+D +I
Sbjct: 190 AEYGLVDSVI 199
>gi|421527266|ref|ZP_15973870.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
gi|402256700|gb|EJU07178.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum ChDC F128]
Length = 193
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 116/180 (64%), Gaps = 2/180 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
QA DI A+ELL+++D + + L++ TG+ E+I +D R S+EA+ YGLID++ R
Sbjct: 133 QATDISIHANELLKIKDKLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDKVFR 192
>gi|122894015|ref|YP_001004211.1| clp protease proteolytic subunit [Ranunculus macranthus]
gi|160380563|sp|A1XGR3.1|CLPP_RANMC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|85540829|gb|ABC70781.1| clp protease proteolytic subunit [Ranunculus macranthus]
Length = 201
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD++ L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDVYR-LHRERLLFLGQGVDSEISNQLIGLMVYLSLEDET 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++++IN PGG V P +AIYDTMQ + V T C+G A + FLL GGE R A P
Sbjct: 60 RDLFLFINSPGGWVVPGVAIYDTMQFVPPDVHTICMGLAASMGSFLLVGGEITKRIAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + + ++TG P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQTGEFVLEAEELLKLRETLTRVYVQRTGNPLWVVSEDMERDVFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDFV 192
>gi|194015348|ref|ZP_03053964.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
gi|194012752|gb|EDW22318.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
pumilus ATCC 7061]
Length = 198
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + + L+ +TGQP E I +D R ++EAL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNQVLAERTGQPIEVIERDTDRDNFKTAEEAL 181
Query: 252 EYGLIDRII 260
+YGLID+++
Sbjct: 182 QYGLIDKVL 190
>gi|225848210|ref|YP_002728373.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
gi|225644423|gb|ACN99473.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Sulfurihydrogenibium azorense Az-Fu1]
Length = 202
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L++ D K +
Sbjct: 9 VPIVIEQTPRGERAY---DIYSRLLKDRIILLGTPIDDHVANLIVAQLLFLEAEDPEKDI 65
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YMYIN PGG VT AIYDTM +K V T C+G A + FLL+ G KG R ++P +RI
Sbjct: 66 YMYINSPGGVVTAGFAIYDTMNYIKPDVVTICIGQAASMGAFLLSAGAKGKRYSLPNARI 125
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+LR++ + + L++ TGQP EKI D R ++EA
Sbjct: 126 MIHQPLGGFQGQATDIEIHAREILRLKRMLNEYLAKHTGQPIEKIEADTERDYFMSAEEA 185
Query: 251 LEYGLIDRII 260
EYGLID++I
Sbjct: 186 KEYGLIDKVI 195
>gi|72383092|ref|YP_292447.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
gi|115311351|sp|Q46ID4.1|CLPP3_PROMT RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|72002942|gb|AAZ58744.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Prochlorococcus marinus str. NATL2A]
Length = 194
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G+G + D+++ L RER+IF+G +++++ ++ ++A ML+L++ D K + +
Sbjct: 3 PTVIEQS-GQGDRAF-DIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
Y+N PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R A+P SRI +
Sbjct: 61 YVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA +I +A E+L +++ + L+ TGQ +KI++D R QEA+E
Sbjct: 121 HQPLGGAQGQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVE 180
Query: 253 YGLIDRII 260
YGLID+++
Sbjct: 181 YGLIDKVV 188
>gi|405363134|ref|ZP_11026132.1| ATP-dependent Clp protease proteolytic subunit [Chondromyces
apiculatus DSM 436]
gi|397090077|gb|EJJ20963.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus sp.
(contaminant ex DSM 436)]
Length = 203
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/182 (43%), Positives = 114/182 (62%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L ++R+I +G ++++ +N I+A +L+L+S D K + +YIN PGG VT LAIY
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T CVG A + LL G KG R A+P SRI + P G A+GQA DI
Sbjct: 78 DTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATDIDI 137
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+LR+R YI + + TG E+I KD R +++A +YGLID ++ R+
Sbjct: 138 QAKEILRLRSYINGLIVKHTGHTVERIEKDTERDYFMSAEDARQYGLIDEVVEKQRVITP 197
Query: 269 MP 270
P
Sbjct: 198 TP 199
>gi|262199481|ref|YP_003270690.1| endopeptidase Clp [Haliangium ochraceum DSM 14365]
gi|262082828|gb|ACY18797.1| Endopeptidase Clp [Haliangium ochraceum DSM 14365]
Length = 202
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/184 (41%), Positives = 112/184 (60%), Gaps = 3/184 (1%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE +W D+++ L ++R++F+G ++++ +N I A +LYL+S D K + +YIN PGG
Sbjct: 21 GERTW---DIYSRLLKDRIVFLGTEVNDDVANMITAQLLYLESEDAEKEIMLYINSPGGS 77
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ ++ PV T CVG A + LLA G G R ++P SRI + P+ A R
Sbjct: 78 VTAGMAIYDTMQHIRCPVATVCVGQAASMGALLLAAGSAGLRRSLPNSRIMIHQPSSAFR 137
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
GQA DI A E+L R + L+ T + E+I KD R +ALE+G+ID II
Sbjct: 138 GQASDIEIHAKEILHTRQRTNEILAHHTKRSIEQIAKDTERDNFLQPSKALEFGIIDEII 197
Query: 261 RPPR 264
P +
Sbjct: 198 EPSK 201
>gi|222084109|ref|YP_002519561.1| ATP-dependent Clp protease proteolytic subunit [Keteleeria
davidiana]
gi|220983661|dbj|BAH11427.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Keteleeria davidiana]
Length = 196
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 QDMFSFLNCPGGSVIPGVGLFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D E+ + +RDYI K +TG E I +DL+R
Sbjct: 121 ARVMIHQPASSYYDGPAADFHKESQHVTMLRDYITKCYIERTGNSGEVIQRDLNRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEAQAYGIVDAV 193
>gi|374977816|pdb|3V5I|A Chain A, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977817|pdb|3V5I|B Chain B, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977818|pdb|3V5I|C Chain C, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977819|pdb|3V5I|D Chain D, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977820|pdb|3V5I|E Chain E, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977821|pdb|3V5I|F Chain F, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977822|pdb|3V5I|G Chain G, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977823|pdb|3V5I|H Chain H, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977824|pdb|3V5I|I Chain I, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977825|pdb|3V5I|J Chain J, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977826|pdb|3V5I|K Chain K, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977827|pdb|3V5I|L Chain L, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977828|pdb|3V5I|M Chain M, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977829|pdb|3V5I|N Chain N, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977830|pdb|3V5I|O Chain O, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977831|pdb|3V5I|P Chain P, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977832|pdb|3V5I|Q Chain Q, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977833|pdb|3V5I|R Chain R, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977834|pdb|3V5I|S Chain S, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977835|pdb|3V5I|T Chain T, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977836|pdb|3V5I|U Chain U, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977837|pdb|3V5I|V Chain V, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977838|pdb|3V5I|W Chain W, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977839|pdb|3V5I|X Chain X, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977840|pdb|3V5I|Y Chain Y, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977841|pdb|3V5I|Z Chain Z, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977842|pdb|3V5I|AA Chain a, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
gi|374977843|pdb|3V5I|BB Chain b, The Crystal Structure Of The Mutant Clpp S98a
(Staphylococcus Aureus)
Length = 203
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAAAMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI KD R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQKDTDRDNFLTAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 182 EYGLIDEVMVP 192
>gi|320530213|ref|ZP_08031283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
gi|320137646|gb|EFW29558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Selenomonas
artemidis F0399]
Length = 199
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A ML+L+S D K +++YIN PGG VT LAIY
Sbjct: 14 DIYSRLLKERIIFLGGPIDDNVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGLAIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G KG R A+P +RI + P G A+GQ+ DI+
Sbjct: 74 DTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTDIQI 133
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDR-IIRPP 263
+A E+LR+R+ + L+R TGQ +KI D R ++EA YGLID ++RPP
Sbjct: 134 QAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEEAKAYGLIDEVVVRPP 189
>gi|260438109|ref|ZP_05791925.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
crossotus DSM 2876]
gi|292809590|gb|EFF68795.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
crossotus DSM 2876]
Length = 194
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 124/191 (64%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ + + +N ++A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDVSANIVVAQLLFLEAEDPGKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT +AIYDTM +KS V T C+G A + FLL+GG KG R A+P + I
Sbjct: 61 QLYINSPGGSVTAGMAIYDTMNYIKSDVSTICIGMAASMGAFLLSGGTKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G +RG A D++ AD++L+ + + + L++ TG+P + I +D R +QEA
Sbjct: 121 MIHQPSGGSRGMASDMKIVADQILKTKQKLNEILAKNTGKPIDVIERDTDRDNYMTAQEA 180
Query: 251 LEYGLIDRIIR 261
LEYGLID II
Sbjct: 181 LEYGLIDSIIE 191
>gi|313894919|ref|ZP_07828479.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|402301976|ref|ZP_10821097.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
gi|312976600|gb|EFR42055.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. oral taxon 137 str. F0430]
gi|400381261|gb|EJP34064.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Selenomonas sp. FOBRC9]
Length = 205
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/176 (45%), Positives = 115/176 (65%), Gaps = 1/176 (0%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A ML+L+S D K +++YIN PGG VT LAIY
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G KG R A+P +RI + P G A+GQ+ DI+
Sbjct: 80 DTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTDIQI 139
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDR-IIRPP 263
+A E+LR+R+ + L+R TGQ +KI D R ++EA YGLID ++RPP
Sbjct: 140 QAKEILRLREVGNEILARHTGQDTDKINVDTERDNFMSAEEAKAYGLIDEVVVRPP 195
>gi|164686707|ref|ZP_02210735.1| hypothetical protein CLOBAR_00302 [Clostridium bartlettii DSM
16795]
gi|164604097|gb|EDQ97562.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium bartlettii DSM 16795]
Length = 193
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 120/190 (63%), Gaps = 2/190 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+ +++ ++ ++A +L+L++ D K ++
Sbjct: 4 VPTVVEQT-GRGERAY-DIYSRLLKDRIIFLSDEVNDTTASLVVAQLLFLEAEDPDKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLL G KG R A+P S I
Sbjct: 62 LYINSPGGSVTAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLNAGAKGKRFALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A +L++++ + K LS +TGQP EKI +D R +QEA
Sbjct: 122 IHQPLGGAKGQATDIEIHAKWILKIKERLNKILSERTGQPIEKIQEDTERDNFMSAQEAK 181
Query: 252 EYGLIDRIIR 261
EYGLID +I
Sbjct: 182 EYGLIDEVIE 191
>gi|149181848|ref|ZP_01860338.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. SG-1]
gi|148850487|gb|EDL64647.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp. SG-1]
Length = 206
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++RVI +G ID+ +N I+A +L+L+S + K +
Sbjct: 12 PTVIEQTNRGERAY---DIYSRLLKDRVIMLGSGIDDNVANSIVAQLLFLESENPEKDIS 68
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 69 IYINSPGGSITAGMAIYDTIQYIKPDVQTICIGMAASMGAFLLAAGAKGKRLALPNAEVM 128
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + LS +TGQP E I+KD R ++ AL
Sbjct: 129 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILSDRTGQPLEVISKDTDRDNFMTAERAL 188
Query: 252 EYGLIDRIIRPPRIKED 268
EYGLIDRII + E+
Sbjct: 189 EYGLIDRIITSNEMNEN 205
>gi|297608276|ref|NP_001061378.2| Os08g0252200 [Oryza sativa Japonica Group]
gi|40253575|dbj|BAD05521.1| putative ATP-dependent Clp protease proteolytic subunit [Oryza
sativa Japonica Group]
gi|255678293|dbj|BAF23292.2| Os08g0252200 [Oryza sativa Japonica Group]
Length = 216
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEVTNHITGLMVYLSIEDGI 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN PGG + +AI DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSPGGWLISGMAICDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|224367556|ref|YP_002601719.1| protein ClpP1 [Desulfobacterium autotrophicum HRM2]
gi|259585947|sp|C0QGT0.1|CLPP_DESAH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|223690272|gb|ACN13555.1| ClpP1 [Desulfobacterium autotrophicum HRM2]
Length = 205
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 123/193 (63%), Gaps = 3/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ V GE ++ D+++ L ++R+IF+G +D+E +N I+A +L+L+S D
Sbjct: 1 MPLIPMVVEQSNRGERAY---DIYSRLLKDRIIFLGSAMDDEVANLIVAQLLFLESEDPE 57
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + YIN PGG VT +A+YDTMQ +K V T C+G A + LLA G KG R ++P
Sbjct: 58 KDINFYINSPGGVVTAGMAVYDTMQYIKPDVATVCIGQAASMGALLLAAGAKGKRFSLPN 117
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G A+GQA DI+ +A+E+LR+++ + LS+ TGQ F+KI++D R
Sbjct: 118 SRIMIHQPLGGAQGQASDIKIQANEILRMKEVLSGILSKHTGQNFDKISEDTDRDFFMSG 177
Query: 248 QEALEYGLIDRII 260
+A EYGL+D ++
Sbjct: 178 DQAKEYGLVDHVV 190
>gi|373486607|ref|ZP_09577280.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
gi|372011468|gb|EHP12063.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Holophaga
foetida DSM 6591]
Length = 198
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ TP GE S+ D+++ L ++ +IF+G ID+ +N I+A ML+L+S D K +
Sbjct: 9 PIVIEETPRGERSY---DIYSRLLKDNIIFLGTAIDDSVANAIVAQMLFLESEDPDKDIQ 65
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTMQ +K+ + T+C+G + LLA G KG R A+P +RI
Sbjct: 66 IYINSPGGSVTAGLAIYDTMQFVKNDIVTYCIGQCASMGAHLLAAGTKGKRFALPNARIM 125
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P+G A+GQA +I E+ R++D + S+ TGQ +K+ KD+ R ++EA+
Sbjct: 126 IHQPSGGAQGQATEIEITYKEIQRLKDNLAGTFSKHTGQTLKKVMKDMDRDYFMSAEEAM 185
Query: 252 EYGLIDRII 260
EYG++D+++
Sbjct: 186 EYGIVDKVL 194
>gi|403669499|ref|ZP_10934703.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC8E]
Length = 196
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLL G KG R A+P S I
Sbjct: 62 LYINSPGGSVTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGTKGKRYALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L+ R+ + + L+ +TGQP E I KD R +++AL
Sbjct: 122 IHQPLGGAQGQATEIEIAARHILKTREKLNRILAERTGQPIEVIEKDTDRDNYMSAEQAL 181
Query: 252 EYGLIDRII 260
EYG+ID+I+
Sbjct: 182 EYGIIDKIM 190
>gi|110596915|ref|ZP_01385205.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
gi|110341602|gb|EAT60062.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Chlorobium
ferrooxidans DSM 13031]
Length = 225
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 123/198 (62%), Gaps = 5/198 (2%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ T G G + D+++ L RER+IF+G IDE + I+A +++L+S D + +Y+YI
Sbjct: 31 MVIETSGRGERAF-DIFSRLLRERIIFLGNGIDEHVAGLIMAQLIFLESEDPERDIYIYI 89
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ L IYDTMQ ++ V T CVG A + FLLA G KG R+++P SRI +
Sbjct: 90 NSPGGSVSAGLGIYDTMQYIRPDVSTVCVGMAASMGAFLLASGAKGKRASLPHSRIMIHQ 149
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P+G A GQ DI +A E+ ++R + + L+R TG+ ++I +D R + ++EALEYG
Sbjct: 150 PSGGAHGQETDIIIQAREIEKIRKLLDELLARHTGKDVKQIREDSERDRWMNAEEALEYG 209
Query: 255 LIDRIIRPPRIKEDMPRK 272
+ID + K MP K
Sbjct: 210 IIDSVFE----KRPMPEK 223
>gi|434398580|ref|YP_007132584.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
gi|428269677|gb|AFZ35618.1| ATP-dependent Clp protease proteolytic subunit [Stanieria
cyanosphaera PCC 7437]
Length = 200
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ + G G + D+++ L RER++F+GQ +D++ +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ESSGRGERAF-DIYSRLLRERIVFLGQQVDDDIANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + ++DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGMFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ TGQP KI +D R ++E+ E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQKLNQHLADHTGQPLSKIEEDTERDFFMSAEESKE 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|251798425|ref|YP_003013156.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
gi|247546051|gb|ACT03070.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JDR-2]
Length = 195
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 121/193 (62%), Gaps = 4/193 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G ID++ +N ++A +L+L + D K +
Sbjct: 4 VPIVVEQTNRGERSY---DIYSRLLKDRIIFLGSAIDDDVANSVIAQLLFLAADDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + LL G KG R A+P + +
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKPDVSTICMGMAASMGSLLLTAGAKGKRFALPNAEV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G RGQA DI+ AD +L+ + + + +TGQP+EKI +D R +++A
Sbjct: 121 MIHQPLGGVRGQASDIKIHADWILKTKQKLNEIYVERTGQPYEKIDRDTDRDNFMSAEDA 180
Query: 251 LEYGLIDRIIRPP 263
L YGLID++I P
Sbjct: 181 LNYGLIDKVITTP 193
>gi|119357822|ref|YP_912466.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
gi|166201813|sp|A1BI15.1|CLPP_CHLPD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|119355171|gb|ABL66042.1| ATP-dependent Clp protease proteolytic subunit ClpP [Chlorobium
phaeobacteroides DSM 266]
Length = 227
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 91/232 (39%), Positives = 137/232 (59%), Gaps = 14/232 (6%)
Query: 38 NLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRE 97
N E + R LYSG ++ I G + M I T G G + D+++ L RE
Sbjct: 5 NFGFEHHAR---KLYSGA-IEQGITGSLVPMVI-------ETSGRGERAF-DIFSRLLRE 52
Query: 98 RVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSP 157
R+IF+G IDE + I+A +++L+S D + +Y+Y+N PGG V+ L IYDTMQ ++
Sbjct: 53 RIIFLGSGIDEHVAGLIMAQLIFLESEDPERDIYIYVNSPGGSVSAGLGIYDTMQYIRPD 112
Query: 158 VGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVR 217
V T CVG A + FLLA G KG R+++P SRI + P+G A+GQ DI +A E+ ++R
Sbjct: 113 VSTVCVGMAASMGAFLLASGTKGKRASLPHSRIMIHQPSGGAQGQESDIIIQAREIEKIR 172
Query: 218 DYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII--RPPRIKE 267
+ + L+ TG+ +++ +D R + +QEALEYG+ID+I RP KE
Sbjct: 173 RLLEEILASHTGKDVQQVREDSERDRWMNAQEALEYGIIDQIFEKRPKPDKE 224
>gi|353351842|ref|YP_004891725.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Picea
morrisonicola]
gi|347977505|dbj|BAK86462.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Picea
morrisonicola]
Length = 196
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + ++D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGLFDIMQIIVPDVHTICMGIAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + G A D E+ + +RDYI K +TG E I +DL R
Sbjct: 121 ARVMIHQPASSYYDGPAADFHTESKHVTMLRDYITKCYIERTGNLGEVIQRDLDRDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 181 ATEARAYGIVDAV 193
>gi|325291111|ref|YP_004267292.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
gi|324966512|gb|ADY57291.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Syntrophobotulus glycolicus DSM 8271]
Length = 202
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 124/191 (64%), Gaps = 5/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G +D+ +N I+A +L+LD+ D K +
Sbjct: 5 VPMVVEQTNRGERSY---DIYSRLLKDRIIFLGGQVDDYMANLIVAQLLFLDAEDPEKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG ++ +AIYDTMQ +++ V T CVG A + FLLA G KG R+A+P S I
Sbjct: 62 FLYINSPGGSISAGMAIYDTMQHVRADVHTICVGLAASMGAFLLASGAKGKRTALPNSEI 121
Query: 191 ALDSP-AGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
+ P G GQA +I A +LRV++ + + L+ TGQP E+I +D R + +QE
Sbjct: 122 LIHQPLLGGLSGQATEIEIHAKHILRVKERMNRLLAEMTGQPVERIEQDTDRDRYLTAQE 181
Query: 250 ALEYGLIDRII 260
A EYGL+D+I+
Sbjct: 182 AKEYGLVDQIL 192
>gi|91203769|emb|CAJ71422.1| strongly similar to ATP-dependent Clp protease proteolytic subunit
ClpP [Candidatus Kuenenia stuttgartiensis]
Length = 224
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 124/197 (62%), Gaps = 2/197 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IFIG I++ +N ++A +L+L + + ++ +
Sbjct: 28 VPYVVEKT-GHGERHY-DIFSRLLKDRIIFIGSAIEDTLTNLVIAQILFLQNENKNQDIN 85
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T LAIYDTMQ ++ V T C+G AY +A LLAGG K R +P +RI
Sbjct: 86 IYINSPGGSITAGLAIYDTMQFVQCDVATFCIGQAYSMAAILLAGGTKNKRFGLPHTRIM 145
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
L P G RG A DI +A+E+L+++ + + L + TGQP E+I D+ R S +A
Sbjct: 146 LHQPWGGMRGTATDISIQAEEILKMKKCLNEILVKHTGQPLERIEADVDRDFYMSSHDAK 205
Query: 252 EYGLIDRIIRPPRIKED 268
EYGLID +I R K++
Sbjct: 206 EYGLIDEVIESLRDKKE 222
>gi|153006264|ref|YP_001380589.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
gi|166201797|sp|A7HFV9.1|CLPP_ANADF RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|152029837|gb|ABS27605.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Anaeromyxobacter sp. Fw109-5]
Length = 204
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 87/195 (44%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
Query: 68 MP-IGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVD 125
MP I P V+ +T GE S+ D+++ L ++R++F+G ID++ +N ++A +L+L+S D
Sbjct: 1 MPYIPMPYVVEQTHRGERSY---DIYSRLLKDRIVFLGTPIDDDVANVVIAQLLFLESED 57
Query: 126 DSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAM 185
K + +YIN PGG VT LAIYDTMQ +K V T C+G A + FLLAGG G R A+
Sbjct: 58 PDKDISLYINSPGGSVTSGLAIYDTMQYVKPQVSTICLGQAASMGAFLLAGGAAGKRFAV 117
Query: 186 PLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
P +RI + P G +GQA DI +A E+LR++ + L++ T QP E+I KD R
Sbjct: 118 PNARIMIHQPMGGFQGQATDIDIQAREILRLKAKLNDILAKHTKQPLERIEKDTDRDYFM 177
Query: 246 GSQEALEYGLIDRII 260
G+ EA EYGLID +I
Sbjct: 178 GAGEAKEYGLIDEVI 192
>gi|403385525|ref|ZP_10927582.1| ATP-dependent Clp protease proteolytic subunit [Kurthia sp. JC30]
Length = 201
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANAIVSQLLFLEAEDPEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLL G+KG R A+P + I
Sbjct: 62 LYINSPGGSVTAGMAIYDTMQFIKPDVQTICIGMAASMGSFLLTAGKKGKRFALPNAEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L+ R+ + + LS +TGQP E I KD R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKHILKTREKLNRILSERTGQPIEIIEKDTDRDNYMSAERAL 181
Query: 252 EYGLIDRIIRPPRIKEDMPR 271
EYG+ID+I+ E+ +
Sbjct: 182 EYGIIDKIMTRNETTEEAKK 201
>gi|323484460|ref|ZP_08089826.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14163]
gi|323692476|ref|ZP_08106710.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
gi|355628696|ref|ZP_09049918.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_3_54FAA]
gi|323402238|gb|EGA94570.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14163]
gi|323503473|gb|EGB19301.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
symbiosum WAL-14673]
gi|354819586|gb|EHF04027.1| ATP-dependent Clp protease proteolytic subunit [Clostridium sp.
7_3_54FAA]
Length = 193
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ T GE S+ D+++ L +ER+IF+G+ + + + I++ +L+L+S D +K +
Sbjct: 4 VPYVIESTSRGERSY---DIFSRLLKERIIFLGEEVTDTSAGLIVSQLLFLESEDPNKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LAIYDTM +K V T C G A + FLLAGG KG R A+P + +
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMNYIKCDVSTICFGMAASMGAFLLAGGAKGKRFALPNAEV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA +I+ A+++L+ + + + L+ TGQP+E I +D R +QEA
Sbjct: 121 MIHQPSGGAQGQATEIQIVAEKILQTKKKLNEILAANTGQPYEVIERDTDRDNYMTAQEA 180
Query: 251 LEYGLIDRII 260
+EYGLIDR+I
Sbjct: 181 MEYGLIDRVI 190
>gi|291518668|emb|CBK73889.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Butyrivibrio
fibrisolvens 16/4]
Length = 194
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 119/180 (66%), Gaps = 3/180 (1%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L ++R++F+G+ ++E ++ +A +L+L+S D SK +++YIN PGG
Sbjct: 14 GERSY---DIYSRLLKDRIVFLGEEVNETTASLTVAQLLFLESEDPSKDIHLYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ +K V T C+G A + FLLAGG+KG R A+P + + + P G A+
Sbjct: 71 VTAGMAIYDTMQYIKCDVSTICIGMAASMGAFLLAGGQKGKRFALPNAEVMIHQPLGGAK 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
GQA +I A +L+ R+ + + L+ TG+ +E++ D R +QEAL+YGLID II
Sbjct: 131 GQATEIEIAAKNILKTREKLNRMLAANTGKDYEQVCLDTERDHWLDAQEALDYGLIDEII 190
>gi|384248981|gb|EIE22464.1| ATP-dependent Clp protease proteolytic subunit [Coccomyxa
subellipsoidea C-169]
Length = 202
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 85/197 (43%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ TP GE S+ D+++ L RER++ + ID+ SN I+A +LYL+S + + +
Sbjct: 8 PMVIEHTPRGERSF---DIYSRLLRERIVMVNGGIDDHMSNLIIAQLLYLESENPEQPIS 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN GG VT LAIYDTMQ +++P+ T CVG A +A LLA GEKG+R ++P SRI
Sbjct: 65 MYINSQGGVVTSGLAIYDTMQYIRNPISTLCVGQAASMASLLLAAGEKGHRRSLPNSRIM 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
L P+G +GQA DIR A+E+ R+ + K ++ TGQ E I + L R + + EA
Sbjct: 125 LHQPSGGFQGQASDIRIHAEEIARLSKRLNKIYAKHTGQSEELIEETLDRDRFQSADEAQ 184
Query: 252 EYGLIDRIIRPPRIKED 268
++GLID +I + E+
Sbjct: 185 QFGLIDEVIETRPVTEE 201
>gi|323140768|ref|ZP_08075687.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
gi|322414786|gb|EFY05586.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Phascolarctobacterium succinatutens YIT 12067]
Length = 197
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 116/180 (64%), Gaps = 3/180 (1%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L ++R++F+ ID+ +N ++A +L+L+S D K +++YIN PGG
Sbjct: 14 GERSY---DIYSRLLKDRIVFVTGPIDDNMANVVIAQLLFLESEDPDKDIHLYINSPGGS 70
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
V+ +AIYDTMQ +K V T C+G A +A LLA G G R A+P SR+ + P G A+
Sbjct: 71 VSAGMAIYDTMQYIKPDVSTICMGMAASMASVLLAAGAPGKRFALPYSRVMIHQPLGGAQ 130
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
GQA +I A E+LR+R+ + + L++ TGQ EKI D R S+EA EYGLID ++
Sbjct: 131 GQATEIEIHAREILRIREEMNQVLAKHTGQTVEKIAADTERDHYLTSKEAKEYGLIDEVV 190
>gi|422340211|ref|ZP_16421165.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
gi|355370151|gb|EHG17539.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
nucleatum subsp. polymorphum F0401]
Length = 193
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDSEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
QA DI A+ELL+++D + + L++ TG+ E+I +D R S+EA+ YGLID + R
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDSVFR 192
>gi|345023014|ref|ZP_08786627.1| ATP-dependent Clp protease proteolytic subunit [Ornithinibacillus
scapharcae TW25]
Length = 195
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 122/193 (63%), Gaps = 5/193 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAEDSGKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +KS V T C G A + FLLA G KG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQYIKSDVSTICTGMAASMGAFLLAAGAKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI A +L++R+ + + LS +TGQP + I +D R +Q A+
Sbjct: 122 IHQPLGGTQGQATDIEIHAKRILQMRENLNQILSERTGQPIDVINRDTERDNFMTAQGAV 181
Query: 252 EYGLIDRII-RPP 263
EYGLID+++ R P
Sbjct: 182 EYGLIDKVLERKP 194
>gi|210615408|ref|ZP_03290535.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
gi|210150257|gb|EEA81266.1| hypothetical protein CLONEX_02751 [Clostridium nexile DSM 1787]
Length = 193
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER+IF+G+ + + ++ I+A +L+L+ D K ++
Sbjct: 5 PYVIEQTSRGERSY---DIYSRLLKERIIFLGEEVTDASASVIIAQLLFLEGEDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL+GG+KG R A+P + I
Sbjct: 62 LYINSPGGSVSAGLAIYDTMQYIKCDVSTICIGMAASMGSFLLSGGKKGKRYALPNAEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I+ A+ +L+ R + L+ TGQ EKI D R +QEA
Sbjct: 122 IHQPLGGAQGQATEIQIAAEHILKTRQKLNTILAENTGQSLEKIQADTERDNFMSAQEAK 181
Query: 252 EYGLIDRII 260
EYGL+D +I
Sbjct: 182 EYGLVDEVI 190
>gi|91793847|ref|YP_563498.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
denitrificans OS217]
gi|123356647|sp|Q12LA1.1|CLPP_SHEDO RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|91715849|gb|ABE55775.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
denitrificans OS217]
Length = 203
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 119/190 (62%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG KG R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAKGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +++ + + L+ TGQP E I +D R + +A
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLAEHTGQPLEVIERDTDRDNFMSATQA 189
Query: 251 LEYGLIDRII 260
++YGL+D ++
Sbjct: 190 MDYGLVDSLL 199
>gi|330814219|ref|YP_004358458.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
gi|327487314|gb|AEA81719.1| ATP-dependent Clp protease proteolytic subunit [Candidatus
Pelagibacter sp. IMCC9063]
Length = 204
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 124/191 (64%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L +ER+IF+ I+ + S+ I A +L+L+S ++SK +
Sbjct: 13 VPMVVEQTPRGERAY---DIYSRLLKERIIFLVGPINSQVSSLISAQLLFLESENNSKEI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+MYIN PGG VT LAIYDTMQ +K V T C+G A + FLLA GEKG R ++P SR+
Sbjct: 70 FMYINSPGGIVTDGLAIYDTMQYIKPAVATLCIGQACSMGSFLLAAGEKGQRMSLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+ +GQA DI A+E+++ + + + S+ TGQ EKI + L R K ++EA
Sbjct: 130 MVHQPSAGFQGQATDIEIHANEIMQTKKKLNEIYSKHTGQSVEKIKEALERDKFMSAEEA 189
Query: 251 LEYGLIDRIIR 261
+GLID+++
Sbjct: 190 KAFGLIDKVVE 200
>gi|374369272|ref|ZP_09627306.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
basilensis OR16]
gi|373099185|gb|EHP40272.1| ATP-dependent Clp protease proteolytic subunit [Cupriavidus
basilensis OR16]
Length = 216
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 121/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ER+IF+ ++++ +N ++A +L+L+S + K
Sbjct: 23 LGLVPMVVEQSGRGERAY-DIYSRLLKERLIFMVGEVNDQTANLVVAQLLFLESENPDKD 81
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ LAIYDTMQ +K V T C+G A + FLL+ G KG RSA+P SR
Sbjct: 82 ISLYINSPGGSVSAGLAIYDTMQFVKPDVATLCMGMAASMGAFLLSAGAKGKRSALPNSR 141
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + P G ARGQA DI +A E+L +R+ + LS TGQP EKI +D R +
Sbjct: 142 IMIHQPLGGARGQASDIEIQAREILYLRERLNTILSEVTGQPVEKIARDTDRDNFMSGDQ 201
Query: 250 ALEYGLIDRII 260
A++YGLID+++
Sbjct: 202 AVDYGLIDKVL 212
>gi|256828014|ref|YP_003156742.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
gi|256577190|gb|ACU88326.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfomicrobium baculatum DSM 4028]
Length = 198
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 114/180 (63%), Gaps = 1/180 (0%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
G G + D+++ L ++R++ +G ID+ +N I A +L+L+S + K++YMYIN PGG
Sbjct: 13 GRGERMY-DIYSRLLKDRIVLLGTPIDDHVANSICAQLLFLESENPEKQIYMYINSPGGA 71
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
VT +AIYDTMQ + +PV T C+G A +A LLA GEKG R +P SRI + P G +
Sbjct: 72 VTAGMAIYDTMQYISAPVATLCIGQAASMAAVLLAAGEKGMRYTLPHSRIMIHQPMGGFQ 131
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
GQA DI +A E++R+R + L+ TGQ EK+ +D R +EA YGLID+++
Sbjct: 132 GQATDIAIQAKEIIRLRGELNGILANHTGQTLEKVEQDTERDYFMSGEEACAYGLIDQVL 191
>gi|411118195|ref|ZP_11390576.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
gi|410711919|gb|EKQ69425.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Oscillatoriales cyanobacterium JSC-12]
Length = 207
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 113/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+GQ +D + +N ++A +L+LD+ D K +Y+YIN PGG VT + I+
Sbjct: 23 DIYSRLLRERIVFLGQQVDSDLANLVVAQLLFLDAEDPEKDIYLYINSPGGSVTAGMGIF 82
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTM+ ++ V T C+G A + FLL+ G KG R ++P SRI + P G A+GQA DI
Sbjct: 83 DTMKQIRPDVCTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMIHQPLGGAQGQATDIEI 142
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L + + + L+ TGQPF +I +D R + EA +YGLID++I
Sbjct: 143 QAKEILYHKQRLNELLAEHTGQPFSRIQEDTERDFFMSAGEAKDYGLIDQVI 194
>gi|24373360|ref|NP_717403.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
oneidensis MR-1]
gi|60389791|sp|Q8EG19.1|CLPP_SHEON RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|24347620|gb|AAN54847.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella
oneidensis MR-1]
Length = 202
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSF---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +++ + + L+ TGQP E I +D R + +A
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPLEVIERDTDRDNFMSATQA 188
Query: 251 LEYGLIDRII 260
+EYGL+D ++
Sbjct: 189 VEYGLVDAVM 198
>gi|56750021|ref|YP_170722.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 6301]
gi|81300363|ref|YP_400571.1| ATP-dependent Clp protease proteolytic subunit [Synechococcus
elongatus PCC 7942]
gi|1705929|sp|P54415.1|CLPP1_SYNE7 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|67460444|sp|Q5N665.1|CLPP1_SYNP6 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|755165|gb|AAC67306.1| ClpP [Synechococcus elongatus PCC 7942]
gi|56684980|dbj|BAD78202.1| ATP-dependent protease ClpP [Synechococcus elongatus PCC 6301]
gi|81169244|gb|ABB57584.1| ATP-dependent Clp protease proteolytic subunit ClpP [Synechococcus
elongatus PCC 7942]
Length = 197
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/194 (40%), Positives = 121/194 (62%), Gaps = 6/194 (3%)
Query: 67 MMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
M+PI + G G + D+++ L RER+IF+G+ + + +N+I+A +L+L++ D
Sbjct: 1 MIPI-----VVEESGRGERAF-DIYSRLLRERIIFLGEPVTSDVANRIVAQLLFLEAEDP 54
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K +Y+YIN PGG V L I+DTM ++ V T CVG A + FLLA G KG R+++
Sbjct: 55 EKDIYLYINSPGGSVYDGLGIFDTMNHIRPDVSTVCVGLAASMGAFLLAAGAKGKRTSLA 114
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G A+GQA DI +A+E+L ++ + + L+ +TGQP +I D R
Sbjct: 115 HSRIMIHQPLGGAQGQAKDIEIQANEILYIKQNLNEVLAERTGQPLSRIEDDTDRDFFMS 174
Query: 247 SQEALEYGLIDRII 260
+ EA+EYGLIDR+I
Sbjct: 175 ASEAVEYGLIDRVI 188
>gi|358051444|ref|ZP_09145643.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
gi|357259050|gb|EHJ08908.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simiae CCM 7213]
Length = 194
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI +D R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 182 EYGLIDEVMVP 192
>gi|69214835|gb|AAZ03800.1| ATP-depedent Clp protease proteolytic subunit [Ginkgo biloba]
Length = 201
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R PGE WVD+ N L+RER++F+GQ +D+E +NQ++ M+Y + D++
Sbjct: 1 MPIGVPKVPFRIPGEEDAVWVDV-NRLHRERLLFLGQQVDDEIANQLIGIMMYPNGEDEN 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y YIN PGG V P +++YD MQ + V T C+G A + + GGE R A+P
Sbjct: 60 KDIYTYINSPGGTVIPGISLYDAMQFVVPDVHTICMGLAASMGSSVSTGGEITKRIALPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + GQA + EA+E+L++RD I ++TG+P I++D+ R
Sbjct: 120 ARVMIHQPASSYYDGQAGECIMEAEEVLKLRDSITNVYVQRTGKPLWVISEDMERDIFMS 179
Query: 247 SQEALEYGLIDRI 259
+ EA YG++D +
Sbjct: 180 AAEAQAYGIVDLV 192
>gi|403380350|ref|ZP_10922407.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
sp. JC66]
Length = 193
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 114/173 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G I+++ +N ++A +L+LD+ D K +++YIN PGG ++ +AI+
Sbjct: 19 DIYSRLLKDRIIFLGTPINDQVANAVIAQLLFLDAQDQEKDIHLYINSPGGSISAGMAIF 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +KS V T CVG A + FLLA GE G R A+P S I + P G A GQA DI
Sbjct: 79 DTMQFIKSDVSTICVGLAASMGAFLLAAGEIGKRYALPNSEIMIHQPLGGAEGQASDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
A +LR+R+ + L+ +T QP E+I KD R + +A EYG+ID++I+
Sbjct: 139 RAKRILRMREKLNHILAERTKQPLERIEKDTDRDYFMWADQAKEYGIIDKVIQ 191
>gi|124026830|ref|YP_001015945.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
gi|123961898|gb|ABM76681.1| Clp protease proteolytic subunit [Prochlorococcus marinus str.
NATL1A]
Length = 218
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 124/188 (65%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G+G + D+++ L RER+IF+G +++++ ++ ++A ML+L++ D K + +
Sbjct: 27 PTVIEQS-GQGDRAF-DIYSRLLRERIIFLGTDVNDQVADALVAQMLFLEADDPEKDIQL 84
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
Y+N PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R A+P SRI +
Sbjct: 85 YVNSPGGSVTAGLAIYDTMQQVSPDVITICYGLAASMGAFLLSGGTKGKRLALPNSRIMI 144
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA +I +A E+L +++ + L+ TGQ +KI++D R QEA+E
Sbjct: 145 HQPLGGAQGQAVEIEIQAKEILYLKETLNSLLAEHTGQNIQKISEDTDRDHFLSPQEAVE 204
Query: 253 YGLIDRII 260
YGLID+++
Sbjct: 205 YGLIDKVV 212
>gi|315644534|ref|ZP_07897666.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
gi|315280041|gb|EFU43338.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Paenibacillus
vortex V453]
Length = 198
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/178 (43%), Positives = 115/178 (64%), Gaps = 2/178 (1%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ++++ +N I+A ML+L + D K +++YIN PGG +T +AI+
Sbjct: 19 DIYSRLLKDRIIFLGSDVNDVVANSIIAQMLFLSAEDPEKDIHLYINSPGGSITAGMAIF 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + FLL G KG R +P S I + P G A+GQA DI
Sbjct: 79 DTMQFIKPDVSTICVGMAASMGAFLLNAGAKGKRYGLPNSEIMIHQPLGGAQGQATDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR--PPR 264
A +L++RD + + LS +TGQP E+I KD R + EA EYGLID+++ PP+
Sbjct: 139 RARRILKMRDKLNRILSDRTGQPLERIEKDTDRDYFMTADEAKEYGLIDQVLENTPPQ 196
>gi|223043057|ref|ZP_03613105.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|417905699|ref|ZP_12549498.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
gi|222443911|gb|EEE50008.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus capitis SK14]
gi|341598593|gb|EGS41093.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Staphylococcus capitis VCU116]
Length = 195
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + L+ +TGQ EKI +D R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 182 EYGLIDEVMEP 192
>gi|148238406|ref|YP_001223793.1| protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
gi|147846945|emb|CAK22496.1| Protease subunit of ATP-dependent Clp protease [Synechococcus sp.
WH 7803]
Length = 229
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 84/214 (39%), Positives = 127/214 (59%), Gaps = 10/214 (4%)
Query: 56 RNDKPIRGR------IAMMPIGTPKVL---YRTPGEGSWQWVDLWNALYRERVIFIGQNI 106
R PI+ R +++ P P VL G G + D+++ L RER+IF+G +
Sbjct: 5 RTPHPIQNRWRGIQPMSVHPQAAPGVLPTVVEQSGRGDRAF-DIYSRLLRERIIFLGTGV 63
Query: 107 DEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFA 166
D+ ++ ++A ML+L++ D K + +YIN PGG VT LAIYDTMQ + V T C G A
Sbjct: 64 DDAVADALVAQMLFLEAEDPEKDIQVYINSPGGSVTAGLAIYDTMQQVAPDVVTICYGLA 123
Query: 167 YHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
+ FLL+GG KG R A+P +RI + P G A+GQA DI +A E+L +++ + ++
Sbjct: 124 ASMGAFLLSGGTKGKRLALPNARIMIHQPMGGAQGQAVDIEIQAKEILFLKETLNGLMAE 183
Query: 227 KTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
TGQP +KI +D R +A++YGLIDR++
Sbjct: 184 HTGQPLDKIAEDTDRDNFMSPAQAVDYGLIDRVV 217
>gi|416052901|ref|ZP_11578536.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
gi|347991693|gb|EGY33156.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Aggregatibacter actinomycetemcomitans serotype e str.
SC1083]
Length = 188
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/173 (43%), Positives = 111/173 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++RVIF+ +++ +N I+A +L+L+S D K + +YIN PGG VT +AIY
Sbjct: 14 DIYSRLLKDRVIFLSGEVEDNMANLIVAQLLFLESEDPDKDINLYINSPGGSVTAGMAIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + FLLAGG G R A+P +R+ + P G RGQA DI+
Sbjct: 74 DTMQFIKPDVRTLCIGQACSMGAFLLAGGATGKRGALPHARVMIHQPLGGFRGQASDIQI 133
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
A E+L+++ + + L+ TGQP E I KD R +QEA YGLID++ R
Sbjct: 134 HAQEILKIKSTLNERLAFHTGQPIETIEKDTDRDNFMSAQEAKNYGLIDKVFR 186
>gi|32490904|ref|NP_871158.1| hypothetical protein WGLp155 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|31340011|sp|Q8D346.1|CLPP_WIGBR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|25166110|dbj|BAC24301.1| clpP [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 194
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 122/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ + GE S+ D+++ L +ER+IF+ I++ +N I+A M++L+S D K ++
Sbjct: 5 PTVVEKNARGERSY---DIFSRLLKERIIFVTGKIEDYMANLIIAQMIFLESEDPEKDIF 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT ++IYDTMQ +K V T C+G + +A +LA GEKG R ++P +RI
Sbjct: 62 LYINSPGGVVTSGMSIYDTMQFIKCEVSTLCIGQSSSMAALILASGEKGKRFSLPNARIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G ++GQA DI E+L+++ + + LS+ TGQ E I+KD R + F EA+
Sbjct: 122 IHQPLGGSQGQATDIAIHTTEILKIKKCMIELLSKHTGQSAEIISKDTERDRFFSGSEAV 181
Query: 252 EYGLIDRII 260
YGLID++I
Sbjct: 182 IYGLIDKVI 190
>gi|347542087|ref|YP_004856723.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
gi|346985122|dbj|BAK80797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Candidatus
Arthromitus sp. SFB-rat-Yit]
Length = 195
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/196 (41%), Positives = 123/196 (62%), Gaps = 6/196 (3%)
Query: 65 IAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSV 124
+A++PI + + GE S+ D+++ L +ER+IF+G +++ ++ I+A +L+L+S
Sbjct: 1 MALVPIVVEQT---SKGERSY---DIYSRLLKERIIFLGDEVNDVTASLIVAQLLFLESE 54
Query: 125 DDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSA 184
D K +++YIN PGG +T +AIYDTMQ +K V T C+G A + FLL+ G KG R A
Sbjct: 55 DTDKDIHLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLSSGAKGKRFA 114
Query: 185 MPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKR 244
+P S I + P G RGQA DI A +LR+++ + K LS TG+P +I D+ R
Sbjct: 115 LPNSEIMIHQPLGGFRGQATDIDIHAKRILRMKNDLNKILSENTGKPLSQIELDVERDYF 174
Query: 245 FGSQEALEYGLIDRII 260
GS EA EYGLID +I
Sbjct: 175 LGSYEAKEYGLIDNVI 190
>gi|383317431|ref|YP_005378273.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
gi|379044535|gb|AFC86591.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Frateuria
aurantia DSM 6220]
Length = 209
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++++ +N ++A ML+L+S + K +
Sbjct: 12 VPMVVEQTARGERSY---DIYSRLLKERVIFLVGEVNDQVANVLIAQMLFLESENPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTMQ +K V T CVG A A LL G KG R ++P SR+
Sbjct: 69 HLYINSPGGVVTAGLAIYDTMQYIKCDVSTMCVGQACSAASLLLMAGAKGKRFSLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G ARGQA DI +A E+L +R + + TGQP EKI +D+ R + ++ A
Sbjct: 129 MIHQPSGGARGQATDIEIQAQEILYLRRKLNQIYVDHTGQPLEKIERDMERDRFMSAETA 188
Query: 251 LEYGLIDRII 260
EYGLID ++
Sbjct: 189 KEYGLIDEVL 198
>gi|403745256|ref|ZP_10954194.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121484|gb|EJY55777.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
Length = 185
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 113/180 (62%), Gaps = 3/180 (1%)
Query: 81 GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGD 140
GE S+ D+++ L ++R+IF+G ID++ +N ++A +L+L + D K + MYIN PGG
Sbjct: 7 GERSY---DIYSRLLKDRIIFLGTAIDDDVANAVVAQLLFLAADDPDKDIQMYINSPGGS 63
Query: 141 VTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAAR 200
V+ LAIYDTMQ +K V T CVG A + LL G KG R A+P S + + P G AR
Sbjct: 64 VSAGLAIYDTMQHIKPDVSTMCVGMAASMGAVLLTAGAKGKRFALPNSEVMIHQPLGGAR 123
Query: 201 GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
GQA DI A +L+ R+ + K L+ ++GQP E++ +D R ++EA YGLID +I
Sbjct: 124 GQASDIEIHARHILKTRERLNKILAERSGQPLERVAQDTDRDNFMSAEEAKAYGLIDEVI 183
>gi|295676517|ref|YP_003605041.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
gi|295436360|gb|ADG15530.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1002]
Length = 217
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A ML+L+S + K
Sbjct: 24 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKD 82
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+Y YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 83 IYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSR 142
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
+ + P G ARGQA DI +A E+L ++D + L+ TGQP E+I +D R +
Sbjct: 143 VMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQPVERIARDTDRDNFMSGDD 202
Query: 250 ALEYGLIDRI 259
A YGL+D++
Sbjct: 203 AQAYGLVDQV 212
>gi|209521458|ref|ZP_03270166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
gi|209498114|gb|EDZ98261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. H160]
Length = 217
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A ML+L+S + K
Sbjct: 24 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKD 82
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+Y YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 83 IYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSR 142
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
+ + P G ARGQA DI +A E+L ++D + L+ TGQP E+I +D R +
Sbjct: 143 VMIHQPLGGARGQASDIEIQAREILYLKDRLNHLLAHHTGQPVERIARDTDRDNFMSGDD 202
Query: 250 ALEYGLIDRI 259
A YGL+D++
Sbjct: 203 AQAYGLVDQV 212
>gi|452973448|gb|EME73270.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sonorensis
L12]
Length = 198
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K LS +TGQP E I +D R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNKILSERTGQPLEIIERDTDRDNFKTAEEAK 181
Query: 252 EYGLIDRII 260
EYGLID+++
Sbjct: 182 EYGLIDKVL 190
>gi|456014672|gb|EMF48274.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
halocryophilus Or1]
Length = 233
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/205 (40%), Positives = 127/205 (61%), Gaps = 8/205 (3%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++RVI +G ID+ +N I+A +L+L++ D K +
Sbjct: 5 PTVIEQTSRGERAY---DIYSRLLKDRVIMLGSAIDDNVANSIVAQLLFLEAEDPDKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ ++ V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + LS +TGQP + I KD R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILHLREKLNQILSERTGQPIDVIAKDTDRDNFMTAERAL 181
Query: 252 EYGLIDRIIR----PPRIKEDMPRK 272
EYGLID++I P K+D+ +K
Sbjct: 182 EYGLIDQVITRSKLPENHKKDIVKK 206
>gi|337744565|ref|YP_004638727.1| protein ClpP1 [Paenibacillus mucilaginosus KNP414]
gi|379718194|ref|YP_005310325.1| protein ClpP1 [Paenibacillus mucilaginosus 3016]
gi|386720758|ref|YP_006187083.1| protein ClpP1 [Paenibacillus mucilaginosus K02]
gi|336295754|gb|AEI38857.1| ClpP1 [Paenibacillus mucilaginosus KNP414]
gi|378566866|gb|AFC27176.1| ClpP1 [Paenibacillus mucilaginosus 3016]
gi|384087882|gb|AFH59318.1| protein ClpP1 [Paenibacillus mucilaginosus K02]
Length = 193
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 110/172 (63%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G I++ +N I+A +L+L + D K +++YIN PGG +T +AIY
Sbjct: 19 DIYSRLLKDRIIFLGSGINDVVANSIIAQLLFLAASDPDKDIHLYINSPGGSITSGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + FLLA G G R A+P S + + P G A GQA DI
Sbjct: 79 DTMQFIKPDVSTICVGMAASMGAFLLAAGAPGKRFALPNSEVMIHQPLGGAEGQASDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A +L++RD + LS +TGQ FE+I KD R ++EA YGLID++I
Sbjct: 139 RAKRILKMRDKLNTILSERTGQSFERIEKDTDRDNFMSAEEARAYGLIDKVI 190
>gi|291550775|emb|CBL27037.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Ruminococcus
torques L2-14]
Length = 193
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G+ +++ ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +K V T C+G A + FLL+GG+KG R A+P + I
Sbjct: 61 QLYINSPGGSVTAGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGKKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA +I+ A+ +LR + + + L+ TG+P E I +D R ++EA
Sbjct: 121 MIHQPSGGAQGQATEIQIAAEHILRTKKKLNEILAANTGKPLEVIQQDTERDNFMSAEEA 180
Query: 251 LEYGLIDRII 260
EYGLID +I
Sbjct: 181 KEYGLIDEVI 190
>gi|302871325|ref|YP_003839961.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
gi|302574184|gb|ADL41975.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor obsidiansis OB47]
Length = 195
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R++ + I ++ ++ I+A +L+L++ D K +
Sbjct: 5 VPIVIEQTNRGERAY---DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT AIYDTMQ +K V T CVG A + FLLA G KG R A+P S I
Sbjct: 62 YLYINSPGGSVTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G RGQA DI+ A+ +L++++ I K LS +TGQP E I +D R ++EA
Sbjct: 122 MIHQPLGGVRGQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEA 181
Query: 251 LEYGLIDRII 260
L+YG+IDR+I
Sbjct: 182 LKYGIIDRVI 191
>gi|166369013|ref|YP_001661286.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|390442513|ref|ZP_10230504.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|422303000|ref|ZP_16390356.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425435289|ref|ZP_18815746.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425439908|ref|ZP_18820220.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425452211|ref|ZP_18832029.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|425458445|ref|ZP_18837933.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|425472440|ref|ZP_18851281.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440754784|ref|ZP_20933986.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|166091386|dbj|BAG06094.1| ATP-dependent Clp protease proteolytic subunit 2 [Microcystis
aeruginosa NIES-843]
gi|389680218|emb|CCH91098.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389719747|emb|CCH96448.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389766108|emb|CCI08183.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|389792060|emb|CCI12154.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389822691|emb|CCI29606.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|389834168|emb|CCI34630.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389881467|emb|CCI37973.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|440174990|gb|ELP54359.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 233
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 112/179 (62%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D++ ++ I+A +LYL++ D K + +YIN PGG V LAIY
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIY 106
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL GG G R ++P SRI + P G A+GQA DI
Sbjct: 107 DTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASDIAI 166
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E+L ++ + L+ TGQP+++I D R + EA EYGLID +I P + +
Sbjct: 167 QAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDLVISRPELPD 225
>gi|168186116|ref|ZP_02620751.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
gi|169296133|gb|EDS78266.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum C str. Eklund]
Length = 195
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 123/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ +++ ++ ++A +L+L++ D K +
Sbjct: 4 VPVVVEQTNRGERSY---DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG +T +AIYDTMQ +K V T C+G A + FLL G KG R A+P S I
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A+ +L+++D + K LS +TG+P E I KD+ R ++EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEAEEA 180
Query: 251 LEYGLIDRII 260
EYGLID +I
Sbjct: 181 KEYGLIDDVI 190
>gi|359689539|ref|ZP_09259540.1| ATP-dependent Clp protease proteolytic subunit [Leptospira
licerasiae serovar Varillal str. MMD0835]
gi|418749517|ref|ZP_13305805.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
gi|418759173|ref|ZP_13315353.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|384113664|gb|EID99928.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae serovar Varillal str. VAR 010]
gi|404274402|gb|EJZ41720.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira licerasiae str. MMD4847]
Length = 197
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 126/194 (64%), Gaps = 2/194 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G ++ D+++ L ++R+IF+G I ++++N I+A +L+LD+ + + +Y+
Sbjct: 5 PTVIEQT-GRGEMRY-DVFSRLLKDRIIFLGDAISDDYANVIIAQLLFLDAENPDRDIYL 62
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
Y+N PGG V+ LAIYDTMQ +K+ V T C+G A +A LLAGG KG RSA+P SRI +
Sbjct: 63 YLNSPGGYVSSGLAIYDTMQYIKADVRTLCIGQASSMAALLLAGGAKGKRSALPHSRIMM 122
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A GQA DI +A E+L+++ + ++ TG+ E++ KD R +EA +
Sbjct: 123 HQPTGGATGQASDIAIQAKEVLKLKQVLNGLYAKHTGKSVEEVQKDTERDLYMTPEEAQK 182
Query: 253 YGLIDRIIRPPRIK 266
YG+ID +I R K
Sbjct: 183 YGIIDSVISIERQK 196
>gi|150388889|ref|YP_001318938.1| ATP-dependent Clp protease proteolytic subunit [Alkaliphilus
metalliredigens QYMF]
gi|167008644|sp|A6TM61.1|CLPP_ALKMQ RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|149948751|gb|ABR47279.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Alkaliphilus
metalliredigens QYMF]
Length = 194
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G I++ ++ ++A +L+L++ D K +
Sbjct: 4 VPVVVEQTSRGERSY---DIFSRLLKERIIFLGDEINDVTASLLVAQLLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG +T +AIYDTM +K V T CVG A + FLLA G KG R A+P + +
Sbjct: 61 QIYINSPGGSITAGMAIYDTMNYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNAEV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G RGQA+DIR A+ ++++RD + K L +TGQP E++ KD R ++EA
Sbjct: 121 MIHQPLGGTRGQAEDIRIHAERIVKLRDTLNKILVERTGQPLERVQKDTDRDFFMEAKEA 180
Query: 251 LEYGLIDRII 260
EYG+ID +I
Sbjct: 181 KEYGIIDEVI 190
>gi|145642383|ref|ZP_01797943.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae R3021]
gi|145272926|gb|EDK12812.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
influenzae 22.4-21]
Length = 193
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D +K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDRMANLIVAQLLFLESEDPTKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +KS + T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKSDIRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA DI+ A E+L+++ + L+ TGQ E+I KD R ++EA
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKHTLNDRLAFHTGQSIERIEKDTDRDNFMSAEEAQ 181
Query: 252 EYGLIDRII 260
YGL+D ++
Sbjct: 182 AYGLVDEVL 190
>gi|117921102|ref|YP_870294.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
ANA-3]
gi|166214711|sp|A0KYL9.1|CLPP_SHESA RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|117613434|gb|ABK48888.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
ANA-3]
Length = 202
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 118/190 (62%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSF---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L ++ + LS TGQP E I +D R + +A
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHTGQPLEVIERDTDRDNFMSATQA 188
Query: 251 LEYGLIDRII 260
+EYGL+D ++
Sbjct: 189 VEYGLVDAVM 198
>gi|395006778|ref|ZP_10390579.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. CF316]
gi|394315232|gb|EJE52048.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Acidovorax
sp. CF316]
Length = 202
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 121/195 (62%), Gaps = 3/195 (1%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ER+IF+ ++++ +N ++A +L+L+S + K
Sbjct: 9 LGMVPMVIEQSGRGERSY-DIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESENPDKD 67
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ YIN PGG VT +AIYDTMQ +K V T CVGFA + FLLA G KG R ++P S+
Sbjct: 68 ISFYINSPGGSVTAGMAIYDTMQFIKPDVSTMCVGFAASMGAFLLAAGAKGKRFSLPNSK 127
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + G ARGQA DI A ++LR +D + + L+ +TGQP EK+ D R + E
Sbjct: 128 IMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKNDTERDYFLTADE 187
Query: 250 ALEYGLIDRII--RP 262
A EYGL+D++I RP
Sbjct: 188 AKEYGLVDQVIAQRP 202
>gi|314933077|ref|ZP_07840443.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
gi|313654396|gb|EFS18152.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus caprae C87]
Length = 195
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + L+ +TGQ EKI +D R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQSIEKIQQDTDRDNFLTAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 182 EYGLIDEVMEP 192
>gi|118444381|ref|YP_878863.1| ATP-dependent Clp protease proteolytic subunit [Clostridium novyi
NT]
gi|166201817|sp|A0Q2L1.1|CLPP_CLONN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|118134837|gb|ABK61881.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
novyi NT]
Length = 195
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ +++ ++ ++A +L+L++ D K +
Sbjct: 4 VPVVVEQTNRGERSY---DIYSRLLKDRIIFLGEEVNDVTASLVVAQLLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG +T +AIYDTMQ +K V T C+G A + FLL G KG R A+P S I
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A+ +L+++D + LS +TGQP E I KD+ R ++EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHANRILKIKDKLNSILSERTGQPLEVIKKDVERDNFMEAEEA 180
Query: 251 LEYGLIDRII 260
EYGLID +I
Sbjct: 181 KEYGLIDDVI 190
>gi|409993296|ref|ZP_11276442.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
gi|409935831|gb|EKN77349.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis str. Paraca]
Length = 237
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 114/182 (62%), Gaps = 4/182 (2%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L R+R+IF+G ID+E +N + A ML+L+S D K + +YIN PGG VT + IY
Sbjct: 51 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGMGIY 110
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLA G G R ++P SRI + P G A+GQA DI
Sbjct: 111 DTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAIDIEI 170
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+L + + L++ TGQP E+I D R + EA EYGLID++I +K++
Sbjct: 171 QAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDQVI----LKQN 226
Query: 269 MP 270
+P
Sbjct: 227 LP 228
>gi|339007073|ref|ZP_08639648.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
gi|338776282|gb|EGP35810.1| ATP-dependent Clp protease proteolytic subunit 1 [Brevibacillus
laterosporus LMG 15441]
Length = 195
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G I+++ +N ++A +L+L + D K +
Sbjct: 7 PTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDIS 63
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T CVG A + FLL G KG R A+P S I
Sbjct: 64 IYINSPGGSITAGMAIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIM 123
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A ++++R+++ + +TGQP+E+I KD R +Q A
Sbjct: 124 IHQPLGGAQGQASDIEIAAKRIIKMREHLNGIYAERTGQPYERIAKDTDRDNFLSAQAAK 183
Query: 252 EYGLIDRII 260
EYGLID +I
Sbjct: 184 EYGLIDEVI 192
>gi|291569895|dbj|BAI92167.1| ATP-dependent Clp protease proteolytic subunit [Arthrospira
platensis NIES-39]
Length = 236
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 114/182 (62%), Gaps = 4/182 (2%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L R+R+IF+G ID+E +N + A ML+L+S D K + +YIN PGG VT + IY
Sbjct: 50 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGMGIY 109
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLA G G R ++P SRI + P G A+GQA DI
Sbjct: 110 DTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAIDIEI 169
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+L + + L++ TGQP E+I D R + EA EYGLID++I +K++
Sbjct: 170 QAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDQVI----LKQN 225
Query: 269 MP 270
+P
Sbjct: 226 LP 227
>gi|69214833|gb|AAZ03799.1| ATP-depedent Clp protease proteolytic subunit [Acorus americanus]
Length = 195
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFRSPGEEDAAWVDI-NRLHRERLLFLGQELDSEISNQLVGLMVYLSIEDKT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +++IN PGG V P + +YDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDFFLFINSPGGWVIPGIGLYDTMQFVPPDVHTICMGLAASMGSFILVGGEITKRLAFPH 119
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARVMIHQPASSFYEAQAGEFVLEAEELLKLRETLTRVYVQRTGKPLWVVSEDMERDVFLS 179
Query: 247 SQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 ATEAQAHGIVDLV 192
>gi|443660052|ref|ZP_21132510.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159030460|emb|CAO91362.1| clpP2 [Microcystis aeruginosa PCC 7806]
gi|443332568|gb|ELS47168.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 233
Score = 157 bits (398), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 75/179 (41%), Positives = 112/179 (62%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G +D++ ++ I+A +LYL++ D K + +YIN PGG V LAIY
Sbjct: 47 DIYSRLLRERIVFLGTPVDDQVADSIVAQLLYLEAEDPEKDIQLYINSPGGSVYAGLAIY 106
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL GG G R ++P SRI + P G A+GQA DI
Sbjct: 107 DTMQQIRPDVATICFGLAASMGAFLLCGGAAGKRMSLPSSRIMIHQPLGGAQGQASDIAI 166
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKE 267
+A E+L ++ + L+ TGQP+++I D R + EA EYGLID +I P + +
Sbjct: 167 QAKEILYIKQRLNTMLAHHTGQPYDRIANDTERDFFMSAVEAKEYGLIDLVISRPELPD 225
>gi|291278625|ref|YP_003495460.1| ATP-dependent Clp protease proteolytic subunit [Deferribacter
desulfuricans SSM1]
gi|290753327|dbj|BAI79704.1| ATP-dependent Clp protease, proteolytic subunit [Deferribacter
desulfuricans SSM1]
Length = 195
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/194 (43%), Positives = 120/194 (61%), Gaps = 2/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M P V+ +T G G + D+++ L ++R+IF+G ID+ +N ++A ML+L++ D
Sbjct: 1 MSFYVPYVVEQT-GRGERVY-DIYSRLLKDRIIFLGTAIDDNVANVVIAQMLFLEAEDPD 58
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG +T LAIYDTM +K V T C+G A +A LL+ G KG R A+P
Sbjct: 59 KDIYLYINSPGGVITSGLAIYDTMNYIKPDVSTICIGQAASMAAVLLSSGAKGKRFALPN 118
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+RI + P G +GQA DI A+E+LR++ + + LS+ TGQP EKI D R +
Sbjct: 119 ARIMIHQPLGGFQGQAKDIEIHANEILRMKKMLNEILSKNTGQPIEKIEMDSDRDFFMSA 178
Query: 248 QEALEYGLIDRIIR 261
EA EYGLID I
Sbjct: 179 MEAKEYGLIDDCIE 192
>gi|428306359|ref|YP_007143184.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
gi|428247894|gb|AFZ13674.1| ATP-dependent Clp protease proteolytic subunit ClpP [Crinalium
epipsammum PCC 9333]
Length = 202
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 77/188 (40%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER+IF+GQ +D + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIIFLGQQVDADLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ + I+DTM ++ + T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGMGIFDTMNQIRPDISTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L + + + L++ TGQP EKI +D R ++E+
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYHKRRLNEFLAQHTGQPLEKIEEDTERDFFMSAEESKN 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|357013904|ref|ZP_09078903.1| ClpP1 [Paenibacillus elgii B69]
Length = 193
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 110/172 (63%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G I++ +N I+A ML+L + D K + +YIN PGG +T +AIY
Sbjct: 19 DIYSRLLKDRIIFLGSPINDVVANSIIAQMLFLAATDPDKDISVYINSPGGSITSGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + FLLA G KG R A+P S + + P G A GQA DI
Sbjct: 79 DTMQFIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEVMIHQPLGGAEGQASDIEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A +L++RD + L+ +TGQ FE+I KD R +++A YGLID++I
Sbjct: 139 RAKRILKMRDKLNTILAERTGQSFERIEKDTDRDNFMSAEDAKNYGLIDKVI 190
>gi|428320528|ref|YP_007118410.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
gi|428244208|gb|AFZ09994.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
nigro-viridis PCC 7112]
Length = 229
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 121/199 (60%), Gaps = 6/199 (3%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P VL ++ G G + D+++ L RER++F+G + +E ++ I+A +LYLD+ D K V
Sbjct: 27 VPMVLEQS-GMGERAF-DIYSRLLRERIVFLGTPVTDEVADSIVAQLLYLDAEDPEKDVQ 84
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT +AIYDTMQ ++ V T C G A + FLL G G R ++P SRI
Sbjct: 85 MYINSPGGSVTAGMAIYDTMQQIRPDVVTICYGLAASMGAFLLTAGAHGKRMSLPSSRIM 144
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI +A E+L + + + L+ TGQP EK+ D R ++EA
Sbjct: 145 IHQPLGGAQGQAVDIEIQAKEILYHKRKLNQLLAHHTGQPIEKLEADTERDFFMSAEEAK 204
Query: 252 EYGLIDRIIRPPRIKEDMP 270
YGL+DR+I KE++P
Sbjct: 205 NYGLVDRVIA----KENLP 219
>gi|374605361|ref|ZP_09678292.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
dendritiformis C454]
gi|374389036|gb|EHQ60427.1| ATP-dependent Clp protease proteolytic subunit ClpP [Paenibacillus
dendritiformis C454]
Length = 198
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 117/191 (61%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+IF+G ID++ +N I+A ML+L + D K ++
Sbjct: 5 PMVIEQTNRGERSY---DIYSRLLKDRIIFLGSAIDDDVANSIIAQMLFLQADDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T CVG A + LL G G R A+P S I
Sbjct: 62 LYINSPGGSVTAGMAIYDTMQHIKPDVSTICVGLAASMGSLLLTAGAPGKRIALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA DI+ AD +++ R + + +TGQP+EKI +D R + EA
Sbjct: 122 IHQPLGGVRGQASDIKIHADWIIKTRQKLNQIYVDRTGQPYEKIERDTDRDYFMSADEAK 181
Query: 252 EYGLIDRIIRP 262
YGL+D ++ P
Sbjct: 182 AYGLVDSVLHP 192
>gi|444912991|ref|ZP_21233148.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
gi|444716404|gb|ELW57255.1| ATP-dependent Clp protease proteolytic subunit [Cystobacter fuscus
DSM 2262]
Length = 205
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/199 (42%), Positives = 124/199 (62%), Gaps = 6/199 (3%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE S+ D+++ L ++R++ +G ID++ +N I++ +L+L+S D
Sbjct: 4 MPV--PYVIEQTHRGERSY---DIYSRLLKDRIVMLGTEIDDDVANVIVSQLLFLESEDP 58
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG VT LAIYDTMQ +K V T CVG A + LL G KG R A+P
Sbjct: 59 DKDINLYINSPGGSVTAGLAIYDTMQYVKPNVSTICVGQAASMGAVLLLAGAKGKRYALP 118
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
SRI + P G RGQA DI +A E+LR+R + + + + TGQP E++ KD R G
Sbjct: 119 SSRIMIHQPLGGVRGQATDIEIQAKEILRMRAKLNELIVKHTGQPIERVEKDTDRDYFMG 178
Query: 247 SQEALEYGLIDRIIRPPRI 265
+ EA YG++D + P +I
Sbjct: 179 AAEAKAYGILDEVQNPRKI 197
>gi|373457870|ref|ZP_09549637.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
gi|371719534|gb|EHO41305.1| ATP-dependent Clp protease proteolytic subunit [Caldithrix abyssi
DSM 13497]
Length = 206
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 118/177 (66%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L +ER++F+G ID+ ++ I++ +L+L++ D +K +Y+YIN PGG V+
Sbjct: 14 SERAYDIYSRLLKERIVFLGTPIDDNVASLIISQLLFLEAEDPTKDIYLYINSPGGIVSS 73
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQA 203
LAIYDTM+ +K V T C+G A + LLA G KG R A+P +RI + P G A GQA
Sbjct: 74 GLAIYDTMRYIKPDVVTTCMGQAASMGAVLLAAGAKGKRYALPHARIMIHQPLGGAEGQA 133
Query: 204 DDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
DI A+E+LR++ + + L+ TG+P EKI +D R ++EALEYGLID+++
Sbjct: 134 SDIAIAANEILRIKKVLNQILADATGKPLEKIEQDTDRNFFMSAEEALEYGLIDKVL 190
>gi|262066529|ref|ZP_06026141.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294783780|ref|ZP_06749104.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|358467634|ref|ZP_09177325.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
gi|291379763|gb|EFE87281.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
periodonticum ATCC 33693]
gi|294480658|gb|EFG28435.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 1_1_41FAA]
gi|357067511|gb|EHI77623.1| hypothetical protein HMPREF9093_01805 [Fusobacterium sp. oral taxon
370 str. F0437]
Length = 193
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/180 (45%), Positives = 114/180 (63%), Gaps = 2/180 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL+S D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLL+ G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
QA DI A+ELL+++D + + L+R TG+ E+I D R S+EA+ YGLID + R
Sbjct: 133 QATDISIHANELLKIKDRLAELLARNTGKTKEQILNDTERDNYLSSEEAVRYGLIDSVFR 192
>gi|113970830|ref|YP_734623.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
MR-4]
gi|123029527|sp|Q0HHA1.1|CLPP_SHESM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|113885514|gb|ABI39566.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
MR-4]
Length = 202
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 118/190 (62%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSF---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L ++ + LS TGQP E I +D R + +A
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLSEHTGQPLELIERDTDRDNFMSATQA 188
Query: 251 LEYGLIDRII 260
+EYGL+D ++
Sbjct: 189 VEYGLVDAVM 198
>gi|260889843|ref|ZP_05901106.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
gi|260860449|gb|EEX74949.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
hofstadii F0254]
Length = 208
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/186 (42%), Positives = 117/186 (62%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
V+ G G + D+++ L ++R+IF+ +++ +N I+A +L+LD+ D+ K + MYI
Sbjct: 24 VVIENDGRGERSY-DIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNEKDIVMYI 82
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG +T LAIYDTM+ +KS V T CVG A + LLA G KG R ++P SRI +
Sbjct: 83 NSPGGVITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLAAGAKGKRYSLPNSRIMIHQ 142
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G ARGQA DI+ +A E+ R+++ K LS TG+ E+I D R +EA+ YG
Sbjct: 143 PLGGARGQATDIQIQAKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSPEEAVNYG 202
Query: 255 LIDRII 260
LID+I+
Sbjct: 203 LIDKIL 208
>gi|428777917|ref|YP_007169704.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
gi|428692196|gb|AFZ45490.1| ATP-dependent Clp protease proteolytic subunit ClpP [Halothece sp.
PCC 7418]
Length = 228
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 82/217 (37%), Positives = 128/217 (58%), Gaps = 5/217 (2%)
Query: 52 YSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFS 111
+S +R+D+ ++ ++ G G + DL++ L RER+IF+G +D++ +
Sbjct: 8 FSSLRSDRACSPVVSQSQNAVVPMVIEQSGMGERAF-DLYSRLLRERIIFLGTPVDDQIA 66
Query: 112 NQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAG 171
+ + A ML+L++ D K + +YIN PGG V +AIYDTMQ ++ V T C G A +
Sbjct: 67 DSVAAQMLFLEAEDPEKDIQLYINSPGGSVYAGMAIYDTMQQIQPDVATICYGLAASMGA 126
Query: 172 FLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQP 231
FLLAGG G R ++ SRI + P G A+GQA DI +A E+L +++ + + L+ TGQP
Sbjct: 127 FLLAGGAAGKRMSLTNSRIMIHQPLGGAQGQAADIEIQAREILYIKNTLNELLAYHTGQP 186
Query: 232 FEKITKDLSRIKRFGSQEALEYGLIDRII----RPPR 264
++I +D R + EA EYGLID++I R PR
Sbjct: 187 LDRIAEDTDRDFYMSATEAQEYGLIDQVITSQTRSPR 223
>gi|163781838|ref|ZP_02176838.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159883058|gb|EDP76562.1| ATP-dependent Clp protease proteolytic subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 201
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 123/191 (64%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L ++R++ +G ID+ +N I+A +L+L+S D K +
Sbjct: 11 VPIVIEQTPRGERAY---DIYSRLLQDRIVLLGFPIDDHVANLIVAQLLFLESQDPDKDI 67
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +A+YDTMQ +K V T C+G A + LLA G KG R A+P SRI
Sbjct: 68 YLYINSPGGSVTAGMAVYDTMQYIKPDVVTICIGQAASMGAVLLAAGAKGKRYALPHSRI 127
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A+E+ R++ + + L++ TGQ EKI KD+ R ++EA
Sbjct: 128 MIHQPLGGIQGQATDIIIHAEEIKRIKRMLNEILAKHTGQDLEKIEKDVERDYFMSAEEA 187
Query: 251 LEYGLIDRIIR 261
+YG+ID++I
Sbjct: 188 KDYGVIDKVIE 198
>gi|11467216|ref|NP_043048.1| ATP-dependent Clp protease proteolytic subunit [Zea mays]
gi|1168978|sp|P26567.2|CLPP_MAIZE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|902246|emb|CAA60310.1| clpP [Zea mays]
Length = 216
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV YR PG+ WVDL+N +YRER +F+GQ I E +N I M+YL D +
Sbjct: 1 MPIGVPKVPYRIPGDEEATWVDLYNVMYRERTLFLGQEIRCEITNHITGLMVYLSIEDGN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
++++IN GG + +AI+DTMQ++ + T C+G A +A F+L GGE R A P
Sbjct: 61 SDIFLFINSLGGWLISGMAIFDTMQTVTPDIYTICLGIAASMASFILLGGEPTKRIAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+RI L PA A R + + E +EL +VR+ I + + +TG+PF +++D+ R
Sbjct: 121 ARIMLHQPASAYYRARTPEFLLEVEELHKVREMITRVYALRTGKPFWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA YGL+D +
Sbjct: 181 ADEAKAYGLVDIV 193
>gi|421872665|ref|ZP_16304283.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
gi|372458638|emb|CCF13832.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Brevibacillus
laterosporus GI-9]
Length = 193
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+IF+G I+++ +N ++A +L+L + D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIFLGTPINDQVANSVVAQLLFLQAEDPDKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T CVG A + FLL G KG R A+P S I
Sbjct: 62 IYINSPGGSITAGMAIYDTMQYIKPDVSTICVGLAASMGSFLLCAGAKGKRYALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A ++++R+++ + +TGQP+E+I KD R +Q A
Sbjct: 122 IHQPLGGAQGQASDIEIAAKRIIKMREHLNGIYAERTGQPYERIAKDTDRDNFLSAQAAK 181
Query: 252 EYGLIDRII 260
EYGLID +I
Sbjct: 182 EYGLIDEVI 190
>gi|15616126|ref|NP_244431.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
gi|11386690|sp|Q9K709.1|CLPP1_BACHD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|10176188|dbj|BAB07283.1| ATP-dependent Clp protease proteolytic subunit [Bacillus halodurans
C-125]
Length = 194
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/193 (40%), Positives = 119/193 (61%), Gaps = 4/193 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L + D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGTAIDDNVANSIVAQLLFLQAEDPDKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQYIKPNVSTICIGMAASMGAFLLAAGAKGKRFALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA DI +L +R+ + + L+ +TGQP E+I KD R +++A
Sbjct: 122 IHQPLGGTRGQASDIEIHTRRILEMRETLNRILAERTGQPLEQIAKDTDRDNFMTAEKAR 181
Query: 252 EYGLIDRIIRPPR 264
EYGLID++I +
Sbjct: 182 EYGLIDKVIETTK 194
>gi|42784300|ref|NP_981547.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10987]
gi|402554765|ref|YP_006596036.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
FRI-35]
gi|67460499|sp|Q72XW9.1|CLPP2_BACC1 RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|42740231|gb|AAS44155.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus ATCC 10987]
gi|401795975|gb|AFQ09834.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
FRI-35]
Length = 193
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 122/188 (64%), Gaps = 4/188 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPDKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + L+ +TGQP E + +D R +++AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKAL 181
Query: 252 EYGLIDRI 259
EYGLID+I
Sbjct: 182 EYGLIDKI 189
>gi|357009842|ref|ZP_09074841.1| ATP-dependent Clp protease proteolytic subunit 1 [Paenibacillus
elgii B69]
Length = 192
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 118/191 (61%), Gaps = 2/191 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R++F+G ID++ +N I A +L L + D K ++
Sbjct: 4 VPVVVEQT-GRGERSY-DIYSRLLKDRIVFLGSEIDDQVANSITAQLLLLSAEDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG T AIYDTMQ +K V T CVGFA A LL G KG R A+P + +
Sbjct: 62 LYINSPGGSTTAGFAIYDTMQFIKPDVSTICVGFAASFAAVLLVAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA D++ AD L RD + + +S ++GQP EK+ +D+ R + +A+
Sbjct: 122 IHQPWGGMKGQASDMKIHADRFLDTRDRLNRIVSERSGQPLEKVARDMDRDYFLSADDAV 181
Query: 252 EYGLIDRIIRP 262
YGLID++++P
Sbjct: 182 TYGLIDKVMQP 192
>gi|359447956|ref|ZP_09237512.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
gi|392538775|ref|ZP_10285912.1| ATP-dependent Clp protease proteolytic subunit [Pseudoalteromonas
marina mano4]
gi|358046180|dbj|GAA73761.1| ATP-dependent Clp protease, protease subunit [Pseudoalteromonas sp.
BSi20480]
Length = 205
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/189 (41%), Positives = 117/189 (61%), Gaps = 4/189 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE S+ D+++ L +ER+IF+ +++ +N ILA ML+L+S + K +
Sbjct: 13 VPMVVEQTPKGERSY---DIYSRLLKERIIFLTGQVEDNMANLILAQMLFLESENPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTM +K V T CVG A + FLL G KG R +P SR+
Sbjct: 70 FLYINSPGGSVTAGMAIYDTMNFIKPDVSTICVGQAASMGAFLLTAGAKGKRFCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA D A E+L ++D + + ++ TGQP + I+KD R + EA
Sbjct: 130 MIHQPLGGFQGQASDFEIHAKEILSIKDKLNRLMAEHTGQPLDVISKDTDRDNFMSASEA 189
Query: 251 LEYGLIDRI 259
+EYGL+D +
Sbjct: 190 VEYGLVDSV 198
>gi|237743260|ref|ZP_04573741.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260495117|ref|ZP_05815246.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|422939797|ref|ZP_16967169.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
gi|229433039|gb|EEO43251.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
7_1]
gi|260197560|gb|EEW95078.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_33]
gi|339890648|gb|EGQ79742.1| ATP-dependent Clp protease, protease subunit [Fusobacterium
nucleatum subsp. animalis ATCC 51191]
Length = 193
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
QA DI A+ELL+++D + + L++ TG+ E+I +D R S+EA+ YGLID + R
Sbjct: 133 QATDISIHANELLKIKDKLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDSVFR 192
>gi|372485821|gb|AEX96547.1| clp protease proteolytic subunit (chloroplast) [Polianthes sp.
Pires 2011-05]
Length = 204
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 84/193 (43%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDVYNRLYRERLLFLGQEVDSEISNQLVGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ + V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGIAIYDTMQFVSPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + QA + EA+ELL++R+ + K ++TG P I++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQAGEFLLEAEELLKLRETLTKVYVQRTGNPLWVISEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA +G++D +
Sbjct: 181 AKEAQAHGIVDLV 193
>gi|402312968|ref|ZP_10831891.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnospiraceae bacterium ICM7]
gi|404484025|ref|ZP_11019239.1| ATP-dependent Clp protease proteolytic subunit [Clostridiales
bacterium OBRC5-5]
gi|400367544|gb|EJP20560.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Lachnospiraceae bacterium ICM7]
gi|404342705|gb|EJZ69075.1| ATP-dependent Clp protease proteolytic subunit [Clostridiales
bacterium OBRC5-5]
Length = 193
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 123/191 (64%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ T GE ++ D+++ L ++R+IF+G+ +++ ++ ++A +L+L+S D +K +
Sbjct: 4 VPTVIESTSRGERAF---DIYSRLLKDRIIFLGEEVNDVTASLVVAQILFLESEDPTKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V +AIYDTMQ +K V T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 NLYINSPGGSVVAGMAIYDTMQYVKCDVSTICMGMAASMGAFLLAGGTKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI+ A+++L+ + + K L+ T QP E I +D R ++EA
Sbjct: 121 MIHQPSGGAQGQASDIKIVAEQILKTKQKLNKILAENTNQPIEVIERDTERDNYMSAEEA 180
Query: 251 LEYGLIDRIIR 261
L YG+ID++I
Sbjct: 181 LSYGIIDKVIE 191
>gi|357470615|ref|XP_003605592.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
gi|355506647|gb|AES87789.1| ATP-dependent Clp protease proteolytic subunit [Medicago
truncatula]
Length = 195
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 120/193 (62%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV ++ P E WVDL+N L++ER++F+GQ ++ E SNQ++ M+YL D +
Sbjct: 1 MPIGVPKVPFQLPEEDEASWVDLYNRLFQERLLFLGQEVNTEISNQLVGLMVYLSLEDKT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG+V +AI+D MQ +++ V T CVG A + LL GGE R A P
Sbjct: 61 RDLYLFINSPGGEVISGMAIFDIMQVVEAEVHTVCVGLAASMGSLLLVGGEFTKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
R+ + PA + GQ + EA+ELL++R I +++TG+ +I +D+ R
Sbjct: 121 LRVMIHQPATSLYEGQVGECMLEAEELLKMRKTITNIYAQRTGKASWQIYRDMERDLFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA +G+ID +
Sbjct: 181 AEEAEAHGIIDTV 193
>gi|30023185|ref|NP_834816.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|47567358|ref|ZP_00238071.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|49481130|ref|YP_039138.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|52140414|ref|YP_086415.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
E33L]
gi|75759660|ref|ZP_00739744.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|118480187|ref|YP_897338.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis str. Al Hakam]
gi|190015186|ref|YP_001966706.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|190015451|ref|YP_001967031.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|190015619|ref|YP_001967344.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus]
gi|196032944|ref|ZP_03100357.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196039610|ref|ZP_03106915.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|196045601|ref|ZP_03112831.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|206970378|ref|ZP_03231331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|208702014|ref|YP_002267309.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|217956873|ref|YP_002335967.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH187]
gi|217962631|ref|YP_002341203.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH187]
gi|218231097|ref|YP_002369926.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
B4264]
gi|218848317|ref|YP_002455085.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218900271|ref|YP_002448682.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
G9842]
gi|218906323|ref|YP_002454157.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH820]
gi|222098603|ref|YP_002532661.1| ATP-dependent clp protease proteolytic subunit [Bacillus cereus Q1]
gi|225867113|ref|YP_002752491.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|228903623|ref|ZP_04067744.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|228910978|ref|ZP_04074786.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228917753|ref|ZP_04081294.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228923875|ref|ZP_04087152.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228930150|ref|ZP_04093159.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228936434|ref|ZP_04099232.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228942286|ref|ZP_04104825.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228948867|ref|ZP_04111142.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228955388|ref|ZP_04117393.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228961377|ref|ZP_04122991.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228968242|ref|ZP_04129240.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228975215|ref|ZP_04135773.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228981853|ref|ZP_04142148.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228988373|ref|ZP_04148465.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|229072597|ref|ZP_04205799.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|229082356|ref|ZP_04214819.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|229087619|ref|ZP_04219749.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|229094242|ref|ZP_04225321.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|229112558|ref|ZP_04242095.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|229124654|ref|ZP_04253836.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|229130395|ref|ZP_04259353.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|229147676|ref|ZP_04276019.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|229153305|ref|ZP_04281483.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|229158714|ref|ZP_04286772.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|229164770|ref|ZP_04292604.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|229181405|ref|ZP_04308733.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|229187359|ref|ZP_04314502.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|229193390|ref|ZP_04320339.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|254724422|ref|ZP_05186206.1| ATP-dependent Clp protease proteolytic subunit [Bacillus anthracis
str. A1055]
gi|296505568|ref|YP_003667268.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|301056609|ref|YP_003794820.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|365162906|ref|ZP_09359029.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus sp.
7_6_55CFAA_CT2]
gi|375287157|ref|YP_005107596.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|376258514|ref|YP_005150236.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
NC7401]
gi|376269038|ref|YP_005121750.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
gi|384182975|ref|YP_005568737.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|384189233|ref|YP_005575129.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|402563256|ref|YP_006605980.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-771]
gi|410677561|ref|YP_006929932.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus
thuringiensis Bt407]
gi|423355628|ref|ZP_17333252.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|423356394|ref|ZP_17334004.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|423363017|ref|ZP_17340517.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD022]
gi|423375306|ref|ZP_17352643.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
AND1407]
gi|423386632|ref|ZP_17363887.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-2]
gi|423411112|ref|ZP_17388232.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3O-2]
gi|423427236|ref|ZP_17404267.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-2]
gi|423433103|ref|ZP_17410107.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4O-1]
gi|423438545|ref|ZP_17415526.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X12-1]
gi|423506972|ref|ZP_17483561.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HD73]
gi|423527041|ref|ZP_17503486.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB1-1]
gi|423554402|ref|ZP_17530728.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
ISP3191]
gi|423565981|ref|ZP_17542256.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A1]
gi|423571713|ref|ZP_17547953.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|423572165|ref|ZP_17548378.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|423573202|ref|ZP_17549321.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|423578071|ref|ZP_17554189.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|423583301|ref|ZP_17559412.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD014]
gi|423588968|ref|ZP_17565054.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD045]
gi|423608514|ref|ZP_17584406.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|423608923|ref|ZP_17584814.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|423631886|ref|ZP_17607633.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD154]
gi|423634004|ref|ZP_17609657.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD156]
gi|423644305|ref|ZP_17619922.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD166]
gi|423650994|ref|ZP_17626564.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD169]
gi|423658059|ref|ZP_17633358.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD200]
gi|434378268|ref|YP_006612912.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-789]
gi|449092201|ref|YP_007424642.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|452201640|ref|YP_007481721.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|67460463|sp|Q631K2.1|CLPP2_BACCZ RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460476|sp|Q6HBD8.1|CLPP2_BACHK RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|67460524|sp|Q815J6.1|CLPP2_BACCR RecName: Full=ATP-dependent Clp protease proteolytic subunit 2;
AltName: Full=Endopeptidase Clp 2
gi|17981472|gb|AAL51030.1|AF454757_1 ClpP1 [Bacillus thuringiensis]
gi|29898745|gb|AAP12017.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 14579]
gi|47555979|gb|EAL14317.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9241]
gi|49332686|gb|AAT63332.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus thuringiensis serovar konkukian str. 97-27]
gi|51973883|gb|AAU15433.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus cereus E33L]
gi|74492856|gb|EAO55988.1| ATP-dependent endopeptidase clp proteolytic subunit clpP [Bacillus
thuringiensis serovar israelensis ATCC 35646]
gi|116584526|gb|ABK00643.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus]
gi|116584862|gb|ABK00977.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|116585132|gb|ABK01241.1| ATP-dependent Clp protease, proteolytic subunit [Bacillus cereus]
gi|118419412|gb|ABK87831.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
thuringiensis str. Al Hakam]
gi|195994373|gb|EDX58328.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus W]
gi|196023432|gb|EDX62109.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB108]
gi|196029770|gb|EDX68372.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NVH0597-99]
gi|206734955|gb|EDZ52124.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH1134]
gi|208657869|gb|ACI30239.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus H3081.97]
gi|217064081|gb|ACJ78331.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|217068436|gb|ACJ82684.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH187]
gi|218159054|gb|ACK59046.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus B4264]
gi|218536274|gb|ACK88672.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218540368|gb|ACK92764.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus AH820]
gi|218541218|gb|ACK93612.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus G9842]
gi|221242662|gb|ACM15372.1| ATP-dependent Clp protease, proteolytic subunit (endopeptidase Clp)
[Bacillus cereus Q1]
gi|225789761|gb|ACO29978.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus 03BB102]
gi|228590104|gb|EEK47974.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 10876]
gi|228596063|gb|EEK53740.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BGSC 6E1]
gi|228601980|gb|EEK59473.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
172560W]
gi|228618700|gb|EEK75692.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228624698|gb|EEK81467.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
ATCC 4342]
gi|228629909|gb|EEK86560.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
m1550]
gi|228635689|gb|EEK92176.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST24]
gi|228653094|gb|EEL08974.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-Cer4]
gi|228658805|gb|EEL14463.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
95/8201]
gi|228670938|gb|EEL26245.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-15]
gi|228689234|gb|EEL43056.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-42]
gi|228695735|gb|EEL48590.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-44]
gi|228700788|gb|EEL53311.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock4-2]
gi|228710573|gb|EEL62546.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F65185]
gi|228771354|gb|EEM19828.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar tochigiensis BGSC 4Y1]
gi|228777965|gb|EEM26237.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis Bt407]
gi|228784494|gb|EEM32515.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228791415|gb|EEM39019.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228798262|gb|EEM45261.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|228804180|gb|EEM50794.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|228810829|gb|EEM57175.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar monterrey BGSC 4AJ1]
gi|228817330|gb|EEM63416.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228823266|gb|EEM69100.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar andalousiensis BGSC 4AW1]
gi|228829435|gb|EEM75063.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pondicheriensis BGSC 4BA1]
gi|228835674|gb|EEM81038.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228841990|gb|EEM87096.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar pulsiensis BGSC 4CC1]
gi|228848633|gb|EEM93479.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 200]
gi|228856052|gb|EEN00591.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis IBL 4222]
gi|296326620|gb|ADH09548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis BMB171]
gi|300378778|gb|ADK07682.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
biovar anthracis str. CI]
gi|324329059|gb|ADY24319.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar finitimus YBT-020]
gi|326942942|gb|AEA18838.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar chinensis CT-43]
gi|358355684|dbj|BAL20856.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
cereus NC7401]
gi|358356253|dbj|BAL21424.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
NC7401]
gi|363617191|gb|EHL68590.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus sp.
7_6_55CFAA_CT2]
gi|364514838|gb|AEW58237.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
F837/76]
gi|401076768|gb|EJP85119.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD022]
gi|401079111|gb|EJP87414.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|401081980|gb|EJP90251.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
IS075]
gi|401092725|gb|EJQ00850.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
AND1407]
gi|401108128|gb|EJQ16060.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3O-2]
gi|401109421|gb|EJQ17345.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-2]
gi|401113015|gb|EJQ20887.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4O-1]
gi|401116160|gb|EJQ24002.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X12-1]
gi|401181200|gb|EJQ88353.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
ISP3191]
gi|401192773|gb|EJQ99783.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A1]
gi|401198721|gb|EJR05636.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|401199716|gb|EJR06613.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-A12]
gi|401203128|gb|EJR09969.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|401209361|gb|EJR16120.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD014]
gi|401215208|gb|EJR21926.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MSX-D12]
gi|401225356|gb|EJR31905.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD045]
gi|401236392|gb|EJR42852.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|401238523|gb|EJR44964.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD102]
gi|401263108|gb|EJR69241.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD154]
gi|401271370|gb|EJR77387.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD166]
gi|401280314|gb|EJR86235.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD169]
gi|401281910|gb|EJR87815.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD156]
gi|401288311|gb|EJR94064.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD200]
gi|401632053|gb|EJS49843.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-2]
gi|401791908|gb|AFQ17947.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-771]
gi|401876825|gb|AFQ28992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis HD-789]
gi|402445783|gb|EJV77651.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HD73]
gi|402454204|gb|EJV85997.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB1-1]
gi|409176690|gb|AFV20995.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus
thuringiensis Bt407]
gi|449025958|gb|AGE81121.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|452107033|gb|AGG03973.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 193
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 122/188 (64%), Gaps = 4/188 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + L+ +TGQP E + +D R +++AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKAL 181
Query: 252 EYGLIDRI 259
EYGLID+I
Sbjct: 182 EYGLIDKI 189
>gi|451979976|ref|ZP_21928378.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
gi|451762848|emb|CCQ89596.1| ATP-dependent Clp protease, proteolytic subunit clpP [Nitrospina
gracilis 3/211]
Length = 215
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 127/201 (63%), Gaps = 4/201 (1%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IFIGQ I++ +N I+A +L+L+S + + +
Sbjct: 14 VPIVVEQTSRGERSY---DIYSRLLKDRIIFIGQQIEDHMANLIIAQLLFLESDEPDQDI 70
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG V+ LAIYDTMQ +K V T C+G A + LL G KG R A+P SR+
Sbjct: 71 YLYINSPGGHVSSGLAIYDTMQYIKPDVQTICIGQAASMGALLLTAGTKGKRFALPNSRV 130
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G +GQ+ DI+ A+E+L+VRD + L++ +GQP + I +D R ++A
Sbjct: 131 MIHQPSGGFQGQSTDIQIHAEEILKVRDTLDDILAKHSGQPKDVIRRDTERDHFMTGEQA 190
Query: 251 LEYGLIDRIIRPPRIKEDMPR 271
EYGLID +I +D+ +
Sbjct: 191 KEYGLIDNVITSRTESKDLSK 211
>gi|402817756|ref|ZP_10867343.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
gi|402504728|gb|EJW15256.1| ATP-dependent Clp protease proteolytic subunit 2 [Paenibacillus
alvei DSM 29]
Length = 192
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 117/190 (61%), Gaps = 4/190 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R++F+G I + +N I+A +L L + D K +Y
Sbjct: 6 PYVVEQTSRGERSY---DIYSRLLKDRIVFVGSEITDSLANSIVAQLLLLAAEDSDKDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT IYDTMQ +K V T C G A LL G KG R A+P S I
Sbjct: 63 MYINSPGGSVTAGFGIYDTMQYIKPQVHTICTGLAASYGSILLLAGAKGKRFALPNSEIM 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A +L++R+ + + ++ TGQP E+I KD+ R ++EAL
Sbjct: 123 IHQPHGGAQGQASDIAISAKRILKMRERLVQLMADHTGQPVERIEKDMDRDYFMSAEEAL 182
Query: 252 EYGLIDRIIR 261
EYG+ID+I++
Sbjct: 183 EYGIIDKILK 192
>gi|338532521|ref|YP_004665855.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
gi|337258617|gb|AEI64777.1| ATP-dependent Clp protease proteolytic subunit [Myxococcus fulvus
HW-1]
Length = 203
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 112/176 (63%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L ++R+I +G ++++ +N I+A +L+L+S D K + +YIN PGG VT LAIY
Sbjct: 18 DLYSRLLKDRIIMLGTPVNDDVANIIVAQLLFLESEDPDKGINLYINSPGGSVTAGLAIY 77
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K PV T CVG A + LL G KG R A+P SRI + P G A+GQA DI
Sbjct: 78 DTMQYVKCPVSTICVGQAASMGALLLLAGAKGKRYALPNSRIMIHQPLGGAQGQATDIDI 137
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 264
+A E+LR+R YI + + TG E+I KD R +++A +YGLID ++ R
Sbjct: 138 QAKEILRLRSYINGLIVKHTGHTIERIEKDTERDYFMSAEDARQYGLIDEVVEKQR 193
>gi|229164087|ref|ZP_04292023.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
gi|228619323|gb|EEK76213.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
R309803]
Length = 193
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 122/188 (64%), Gaps = 4/188 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + L+ +TGQP E + +D R +++AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAEKAL 181
Query: 252 EYGLIDRI 259
EYGLID+I
Sbjct: 182 EYGLIDKI 189
>gi|335041121|ref|ZP_08534237.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
gi|334178919|gb|EGL81568.1| ATP-dependent Clp protease proteolytic subunit [Caldalkalibacillus
thermarum TA2.A1]
Length = 196
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 76/172 (44%), Positives = 111/172 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G ID+ +N ++A +L+L + D K V +YIN PGG VT LAIY
Sbjct: 19 DIYSRLLKDRIIFLGTPIDDHVANSVIAQLLFLAAEDPEKDVSLYINSPGGSVTAGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T CVG A + FLLA G KG R A+P S I + P G +GQA DI+
Sbjct: 79 DTMQYIKPDVSTICVGLAASMGSFLLAAGAKGKRFALPNSEIMMHQPLGGVKGQAADIKI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
AD +++ + + + + +TGQP EKI +D R ++EA EYGL+D++I
Sbjct: 139 HADWIIKTKQKLNRIYAERTGQPVEKIERDTDRDFFMSAEEAKEYGLVDQVI 190
>gi|415886844|ref|ZP_11548587.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus MGA3]
gi|387585495|gb|EIJ77820.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
methanolicus MGA3]
Length = 201
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 81/189 (42%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L++ + K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGTPIDDYVANSIVAQLLFLEAENPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA G KG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPDVQTICIGMAASMGAFLLAAGTKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + + LS +TGQP E I KD R +Q+AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLRDKLNQILSERTGQPVEVIAKDTDRDNFMTAQQAL 181
Query: 252 EYGLIDRII 260
EYGL+D II
Sbjct: 182 EYGLVDHII 190
>gi|197117660|ref|YP_002138087.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
bemidjiensis Bem]
gi|226706452|sp|B5EI27.1|CLPP_GEOBB RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|197087020|gb|ACH38291.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter
bemidjiensis Bem]
Length = 199
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID+ +N ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI A E+LR++D + L+ TGQ EK+ D R +EA
Sbjct: 121 IHQPLGGFQGQATDIHIHAKEILRMKDQLNALLAEHTGQSVEKVAADTERDYFMSGEEAK 180
Query: 252 EYGLIDRII 260
YG+ID I+
Sbjct: 181 NYGIIDAIV 189
>gi|209525239|ref|ZP_03273781.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|376006287|ref|ZP_09783579.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|423065156|ref|ZP_17053946.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
gi|209494254|gb|EDZ94567.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Arthrospira
maxima CS-328]
gi|375325348|emb|CCE19332.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|406713288|gb|EKD08459.1| ATP-dependent Clp protease proteolytic subunit ClpP [Arthrospira
platensis C1]
Length = 237
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 113/182 (62%), Gaps = 4/182 (2%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L R+R+IF+G ID+E +N + A ML+L+S D K + +YIN PGG VT + IY
Sbjct: 51 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGMGIY 110
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLA G G R ++P SRI + P G A+GQA DI
Sbjct: 111 DTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAIDIEI 170
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+L + + L++ TGQP E+I D R + EA EYGLID +I +K++
Sbjct: 171 QAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDNVI----LKQN 226
Query: 269 MP 270
+P
Sbjct: 227 LP 228
>gi|423418841|ref|ZP_17395930.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
gi|401105447|gb|EJQ13414.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
Length = 194
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R+I + I +E +N ++A +L+LD+ D K +
Sbjct: 5 PYVVEQTNRGERSY---DIYSRLLKDRIIMLTGEITDELANGVVAQLLFLDADDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T LAI+DTMQ +K+ V T CVG A + FLLAGGEKG R A+P + +
Sbjct: 62 IYINSPGGSITAGLAIFDTMQIIKADVSTLCVGMAASMGAFLLAGGEKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G ARGQA DI A +L +R+ + + LS +TGQ E + +D R +++AL
Sbjct: 122 IHQPLGGARGQATDIEISAKRILHMRERLNQILSERTGQTVESLQRDTERDNFMTAEDAL 181
Query: 252 EYGLIDRII 260
YGLID+I+
Sbjct: 182 NYGLIDKIL 190
>gi|115634688|ref|XP_786892.2| PREDICTED: putative ATP-dependent Clp protease proteolytic subunit,
mitochondrial-like [Strongylocentrotus purpuratus]
Length = 239
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/233 (35%), Positives = 138/233 (59%), Gaps = 13/233 (5%)
Query: 37 PNLSAEFYGRVHKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYR 96
P++S++ G H+SL++G + P+ P V+ +T G G + D+++ L +
Sbjct: 9 PSVSSKLGGLCHRSLHNGAKLHTPL----------VPIVIEQT-GRGERAY-DIYSRLLK 56
Query: 97 ERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKS 156
ER+I + +++ S+ ++A +L+L S + K ++MYIN PGG VT L IYD+MQ +
Sbjct: 57 ERIICLMGPVNDTVSSVVIAQLLFLQSESNKKPIHMYINSPGGSVTAGLGIYDSMQYVLP 116
Query: 157 PVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRV 216
P+ T CVG A + LL G G R ++P SRI + P+G A GQA DI+ +A+E++++
Sbjct: 117 PIATWCVGQACSMGSLLLTAGAPGMRHSLPNSRIMVHQPSGQAVGQATDIQIQAEEIIKL 176
Query: 217 RDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII-RPPRIKED 268
+ I K + TGQ + I + + R QEAL++GLID+++ PP I E+
Sbjct: 177 KKQINKLYVKHTGQTLDVIEQAMERDHFMSPQEALQFGLIDKVLDHPPHIGEN 229
>gi|87301613|ref|ZP_01084453.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
gi|87283830|gb|EAQ75784.1| Clp protease proteolytic subunit [Synechococcus sp. WH 5701]
Length = 213
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/202 (40%), Positives = 122/202 (60%), Gaps = 2/202 (0%)
Query: 59 KPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATM 118
PI P P V+ ++ G G + D+++ L RER+IF+G ID++ ++ ++A +
Sbjct: 8 HPIHNSWQASPGVLPTVVEQS-GRGERAF-DIYSRLLRERIIFLGTGIDDQVADSLVAQL 65
Query: 119 LYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGE 178
L+L++ D K + +Y+N PGG VT LAIYDTMQ + V T C G A + FLL+GG
Sbjct: 66 LFLEAEDPEKDIQIYVNSPGGSVTAGLAIYDTMQQVAPDVVTICYGLAASMGAFLLSGGT 125
Query: 179 KGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKD 238
KG R A+P +RI + P G A+GQA DI +A E+L ++D + ++ TGQP KI +D
Sbjct: 126 KGKRMALPSARIMIHQPLGGAQGQAVDIEIQAKEILFLKDTLNGLMAEHTGQPLAKIAED 185
Query: 239 LSRIKRFGSQEALEYGLIDRII 260
R EA+ YGLIDR++
Sbjct: 186 TDRDYFLSPPEAVSYGLIDRVV 207
>gi|336398035|ref|ZP_08578835.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prevotella
multisaccharivorax DSM 17128]
gi|336067771|gb|EGN56405.1| ATP-dependent Clp protease proteolytic subunit ClpP [Prevotella
multisaccharivorax DSM 17128]
Length = 221
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 114/174 (65%)
Query: 88 VDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAI 147
+D+++ L +R+IF+G ID+ +N + A +LYLDSVD+ K + +Y+N PGG VT L I
Sbjct: 46 MDVFSRLMMDRIIFLGTEIDDYTANTLQAQLLYLDSVDNGKDISIYVNSPGGSVTAGLGI 105
Query: 148 YDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIR 207
YDTMQ + S V T C G A +A LL G++G RSA+P SR+ + P G +GQA DI
Sbjct: 106 YDTMQFITSDVATICTGMAASMAAMLLVSGQEGKRSALPHSRVMIHQPLGGVQGQASDIE 165
Query: 208 NEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
EA E+L+ + ++ +S + QP++K+ KD R ++EA +YG+ID++++
Sbjct: 166 IEAKEILKFKKELYTIISDHSHQPYDKVYKDSDRNYWMTAEEAKDYGMIDQVLK 219
>gi|434391262|ref|YP_007126209.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
gi|428263103|gb|AFZ29049.1| ATP-dependent Clp protease proteolytic subunit ClpP [Gloeocapsa sp.
PCC 7428]
Length = 230
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 117/185 (63%), Gaps = 4/185 (2%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER+IF+G +D+ ++ I+A +L+LD+ D K + +YIN PGG VT +AIY
Sbjct: 43 DIYSRLLRERIIFLGTQVDDTVADSIVAQLLFLDAEDPEKDIQLYINSPGGSVTAGMAIY 102
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLA G G R ++P SRI + P G A+GQA DI
Sbjct: 103 DTMQQIRCDVATICFGLAASMGAFLLAAGAHGKRMSLPNSRIMIHQPLGGAQGQAVDIEI 162
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+L ++ + + L+ TG+P E+I D R ++EA YGLID++I K++
Sbjct: 163 QAKEILYLKRKLNEILAYHTGKPLERIEADTERDFFMSAEEAKNYGLIDQVIS----KQN 218
Query: 269 MPRKD 273
+P+ +
Sbjct: 219 LPKAN 223
>gi|284047883|ref|YP_003398222.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
gi|283952104|gb|ADB46907.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Acidaminococcus fermentans DSM 20731]
Length = 197
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 82/191 (42%), Positives = 121/191 (63%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+ I++ +N I+A +L+L+S D K V
Sbjct: 4 VPIVVEQTSKGERSY---DIYSRLLKDRIIFVTGEIEDHMANLIIAQLLFLESEDPDKDV 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LAIYDTMQ ++ V T CVG A +A LLA G KG R A+P SR+
Sbjct: 61 HLYINSPGGSVSAGLAIYDTMQYIRPDVSTICVGMAASMASVLLAAGTKGKRYALPHSRV 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA DI A E+LR+R+ + + L+ TGQ E+I D R ++EA
Sbjct: 121 MIHQPLGGAQGQATDIEIHAREILRIREEMNQILASHTGQTPEQIRLDTERDHFMTAEEA 180
Query: 251 LEYGLIDRIIR 261
YGLID+++
Sbjct: 181 ANYGLIDQVVH 191
>gi|408792290|ref|ZP_11203900.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
gi|408463700|gb|EKJ87425.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Leptospira meyeri serovar Hardjo str. Went 5]
Length = 200
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 84/204 (41%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M P V+ +T G Q+ D+++ L ++R+IF+G IDE ++N I A +L+L++ +
Sbjct: 1 MSTLMPYVIEQT-SRGERQY-DIFSRLLKDRIIFLGSAIDETYANVISAQLLFLEAENPD 58
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y+YIN PGG V+ LAIYDTMQ +K V T C+G A +A LLAGG KG RSA+P
Sbjct: 59 RDIYLYINSPGGYVSSGLAIYDTMQLIKPEVRTLCIGQASSMAALLLAGGAKGKRSALPN 118
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI L P G A GQA DI A E+++++D + R TG+ +++ KD R +
Sbjct: 119 SRIMLHQPYGGAGGQASDIEISAKEIIKIKDKLIDLYGRHTGKSSDQVRKDTERNFFMSA 178
Query: 248 QEALEYGLIDRIIRPPRIKEDMPR 271
+EA +YG+ID +I+ ++ MP+
Sbjct: 179 EEAKDYGIIDNVIQE---RKQMPQ 199
>gi|390442096|ref|ZP_10230114.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|425439844|ref|ZP_18820158.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|425471167|ref|ZP_18850027.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
gi|389719848|emb|CCH96383.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9717]
gi|389834540|emb|CCI34240.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis sp. T1-4]
gi|389882956|emb|CCI36590.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9701]
Length = 200
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETTGRGERAF-DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G+ G R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ TG+P + I +D R ++EAL+
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALD 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|108804374|ref|YP_644311.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter
xylanophilus DSM 9941]
gi|116243164|sp|Q1AVS9.1|CLPP_RUBXD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|108765617|gb|ABG04499.1| ATP-dependent Clp protease proteolytic subunit ClpP [Rubrobacter
xylanophilus DSM 9941]
Length = 200
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 83/191 (43%), Positives = 125/191 (65%), Gaps = 5/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ ++P GE + +D+++ L ++R+IF+G +D++ +N I+A +L+L+S D + +
Sbjct: 11 PYVIEQSPRGE---RAMDIYSRLLKDRIIFLGTPVDDQVANAIMAQLLHLESEDPEQDIN 67
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG V+ LAIYDTMQ +K + T +G A + FLLA G KG R A+P +RI
Sbjct: 68 LYINSPGGSVSAGLAIYDTMQFVKPDIVTTALGMAASMGAFLLAAGTKGKRFALPNTRIL 127
Query: 192 LDSPA-GAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
L PA G GQA D+ A EL+R + + + LS TGQP++KI +D R G++EA
Sbjct: 128 LHQPAVGGLAGQASDVEIHARELIRTKRRLNEILSEHTGQPYDKIERDTDRDFIMGAEEA 187
Query: 251 LEYGLIDRIIR 261
+EYGLID I+R
Sbjct: 188 IEYGLIDDIVR 198
>gi|154506030|ref|ZP_02042768.1| hypothetical protein RUMGNA_03572 [Ruminococcus gnavus ATCC 29149]
gi|336433385|ref|ZP_08613205.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_58FAA]
gi|153793529|gb|EDN75949.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Ruminococcus gnavus ATCC 29149]
gi|336016316|gb|EGN46103.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_58FAA]
Length = 193
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G+ +++ ++ I+A +L+L++ D +K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKERIIFLGEEVNDVSASVIVAQLLFLEADDPNKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ +K V T C+G A + FLL+GG KG R A+P + I
Sbjct: 61 QLYINSPGGSVTAGLAIYDTMQYIKCDVSTVCIGMAASMGAFLLSGGAKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA +I A+ +LR R + + ++ TGQP E I D R ++EA
Sbjct: 121 MIHQPSGGAQGQATEISIAAEHILRTRQKLNEIMAANTGQPLETIKADTERDNFMSAEEA 180
Query: 251 LEYGLIDRII 260
YGLID +I
Sbjct: 181 KAYGLIDEVI 190
>gi|120599414|ref|YP_963988.1| ATP-dependent Clp protease proteolytic subunit [Shewanella sp.
W3-18-1]
gi|146292590|ref|YP_001183014.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
putrefaciens CN-32]
gi|386313267|ref|YP_006009432.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
putrefaciens 200]
gi|166214710|sp|A4Y5I2.1|CLPP_SHEPC RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|166214712|sp|A1RL89.1|CLPP_SHESW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|120559507|gb|ABM25434.1| ATP-dependent Clp protease proteolytic subunit ClpP [Shewanella sp.
W3-18-1]
gi|145564280|gb|ABP75215.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
putrefaciens CN-32]
gi|319425892|gb|ADV53966.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Shewanella
putrefaciens 200]
Length = 202
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 118/190 (62%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ ++E +N I+A +L+L+S K +
Sbjct: 12 VPMVIEQTAKGERSY---DIYSRLLKERIIFLVGQVEEHMANLIVAQLLFLESESPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGGEKG R +P SR+
Sbjct: 69 FLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGEKGKRFCLPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L ++ + L+ TGQP E I +D R + +A
Sbjct: 129 MIHQPLGGFQGQASDIAIHAQEILGIKHKLNLMLAEHTGQPLEVIERDTDRDNFMSATQA 188
Query: 251 LEYGLIDRII 260
+EYGL+D ++
Sbjct: 189 VEYGLVDSVM 198
>gi|423394662|ref|ZP_17371863.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-1]
gi|423405531|ref|ZP_17382680.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-3]
gi|401657444|gb|EJS74954.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-1]
gi|401661147|gb|EJS78617.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-3]
Length = 193
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 122/188 (64%), Gaps = 4/188 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + L+ +TGQP E + +D R +++AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPIEVLQRDTDRDNFMTAEKAL 181
Query: 252 EYGLIDRI 259
EYGLID+I
Sbjct: 182 EYGLIDKI 189
>gi|343517775|ref|ZP_08754771.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
gi|343394626|gb|EGV07173.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Haemophilus
pittmaniae HK 85]
Length = 195
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L+S D K +
Sbjct: 5 PMVVEQTSRGERSY---DIYSRLLKERVIFLSGEVEDHMANLIVAQLLFLESEDPDKDIN 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG G R+A+P +R+
Sbjct: 62 IYINSPGGSVTAGMAIYDTMQFIKPDVRTLCIGQACSMGAFLLAGGTAGKRAALPNARVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA DI+ A E+L+++ + L+ TGQ E+I KD R +QEA
Sbjct: 122 IHQPLGGFRGQASDIQIHAQEILKIKQTLNDRLAFHTGQSIERIEKDTDRDNFMSAQEAK 181
Query: 252 EYGLIDRII 260
+YGL+D ++
Sbjct: 182 DYGLVDAVL 190
>gi|226706473|sp|B8CRF7.1|CLPP_SHEPW RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|212557511|gb|ACJ29965.1| Peptidase S14, ClpP [Shewanella piezotolerans WP3]
Length = 203
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 117/190 (61%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG +G R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +++ + L+ TGQP E I +D R + EA
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNTMLAEHTGQPIEVIERDTDRDNFMSADEA 189
Query: 251 LEYGLIDRII 260
EYGL+D ++
Sbjct: 190 AEYGLVDSVL 199
>gi|422304551|ref|ZP_16391894.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|425437033|ref|ZP_18817461.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|425446784|ref|ZP_18826783.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|425455241|ref|ZP_18834961.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|425462698|ref|ZP_18842165.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|443653952|ref|ZP_21131195.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
gi|159028981|emb|CAO87442.1| clpP1 [Microcystis aeruginosa PCC 7806]
gi|389678071|emb|CCH93046.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9432]
gi|389732839|emb|CCI03287.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9443]
gi|389790315|emb|CCI13820.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9806]
gi|389803899|emb|CCI17216.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9807]
gi|389824204|emb|CCI27015.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9808]
gi|443333933|gb|ELS48469.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa DIANCHI905]
Length = 199
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETTGRGERAF-DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G+ G R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ TG+P + I +D R ++EAL+
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALD 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|428311957|ref|YP_007122934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
gi|428253569|gb|AFZ19528.1| ATP-dependent Clp protease proteolytic subunit ClpP [Microcoleus
sp. PCC 7113]
Length = 202
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 121/188 (64%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRERIVFLGQPVDSDLANLIVAQLLFLEAEDAEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT + I+DTM ++ V T CVG A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVTAGMGIFDTMNQVRPDVCTICVGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L + + + L+ TGQP E+I +D R ++EA +
Sbjct: 121 HQPLGGAQGQATDIEIQAREILYHKRRLNEFLAEHTGQPIERIEEDTERDFFMSAEEAKD 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|19705312|ref|NP_602807.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|237742958|ref|ZP_04573439.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|254302272|ref|ZP_04969630.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|289766533|ref|ZP_06525911.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296328560|ref|ZP_06871079.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|423137615|ref|ZP_17125258.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
gi|22653693|sp|Q8RHJ8.1|CLPP_FUSNN RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|19713281|gb|AAL94106.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 25586]
gi|148322464|gb|EDK87714.1| S14 family endopeptidase ClpP [Fusobacterium nucleatum subsp.
polymorphum ATCC 10953]
gi|229430606|gb|EEO40818.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
4_1_13]
gi|289718088|gb|EFD82100.1| endopeptidase Clp [Fusobacterium sp. D11]
gi|296154369|gb|EFG95168.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. nucleatum ATCC 23726]
gi|371959667|gb|EHO77345.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. animalis F0419]
Length = 193
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
QA DI A+ELL+++D + + L++ TG+ E+I +D R S+EA+ YGLID + R
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDSVFR 192
>gi|284929721|ref|YP_003422243.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
gi|284810165|gb|ADB95862.1| ATP-dependent Clp protease proteolytic subunit ClpP [cyanobacterium
UCYN-A]
Length = 200
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 117/188 (62%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E SN I+A +L+L++ D + +Y+
Sbjct: 3 PTVI-ETSGRGERAF-DIYSRLLRERIVFLGQEVRDENSNLIVAQLLFLEAEDPERDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSSGLGIFDTMNKIQPDVCTVCTGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + L+ TGQP KI +D R ++EA
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKSLLNNHLADHTGQPLSKIAEDTERDFFMSAEEAKN 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|169334562|ref|ZP_02861755.1| hypothetical protein ANASTE_00965 [Anaerofustis stercorihominis DSM
17244]
gi|169259279|gb|EDS73245.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Anaerofustis stercorihominis DSM 17244]
Length = 193
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 112/173 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+ I+++ +N ++A ML+L+S + K + +YIN PGG VT +AIY
Sbjct: 19 DIYSRLLKDRIIFLSGEINDDVANLVVAEMLFLESQNSEKDIQLYINSPGGSVTAGMAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTM +K V T C+G A + FLLA GEKG R A+P S I + P G +GQ+ D+
Sbjct: 79 DTMNYIKCDVSTICIGMAASMGAFLLACGEKGKRIALPSSEIMIHQPLGGFQGQSSDVEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
A LL+ R+ I K LS++TG+ + I KD R ++EA+EYGLID++I
Sbjct: 139 HAKRLLKTREDINKILSKRTGKTLKTIEKDTDRDNFMSAKEAMEYGLIDKVIE 191
>gi|414161436|ref|ZP_11417696.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410876332|gb|EKS24243.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 194
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/193 (40%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDAEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L+ R + K LS +TGQ E+I KD R + EA
Sbjct: 122 IHQPLGGAQGQATEIEIAATHILKTRAKLNKILSERTGQSIEQIEKDTDRDNFLTADEAK 181
Query: 252 EYGLIDRIIRPPR 264
EYGLID +++P +
Sbjct: 182 EYGLIDEVMQPEK 194
>gi|425449262|ref|ZP_18829103.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|440753940|ref|ZP_20933142.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
gi|389764138|emb|CCI09472.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 7941]
gi|440174146|gb|ELP53515.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Microcystis
aeruginosa TAIHU98]
Length = 200
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETTGRGERAF-DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G+ G R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ TG+P + I +D R ++EAL+
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNQHLASHTGKPLDLIAEDTERDFFMSAEEALD 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|323488686|ref|ZP_08093928.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
donghaensis MPA1U2]
gi|323397704|gb|EGA90508.1| ATP-dependent Clp protease proteolytic subunit [Planococcus
donghaensis MPA1U2]
Length = 203
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/197 (40%), Positives = 124/197 (62%), Gaps = 4/197 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++RVI +G ID+ +N I+A +L+L++ D K +
Sbjct: 5 PTVIEQTSRGERAY---DIYSRLLKDRVIMLGSAIDDNVANSIVAQLLFLEAEDPDKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ ++ V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIRPDVQTICIGMAASMGAFLLAAGTKGKRLALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + LS +TGQP + I KD R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILHLREKLNQILSERTGQPIDVIAKDTDRDNFMTAERAL 181
Query: 252 EYGLIDRIIRPPRIKED 268
EYGLID++I ++ E+
Sbjct: 182 EYGLIDQVITRSKLPEN 198
>gi|336401433|ref|ZP_08582202.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
gi|336161020|gb|EGN64036.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
21_1A]
Length = 193
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
QA DI A+ELL+++D + + L++ TG+ E+I +D R S+EA+ YGLID + R
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSKEAVNYGLIDSVFR 192
>gi|95930403|ref|ZP_01313139.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
gi|95133443|gb|EAT15106.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Desulfuromonas acetoxidans DSM 684]
Length = 196
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%), Gaps = 2/189 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID++ SN ++A +L+L+S D K ++
Sbjct: 4 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGGIDDQISNLVIAQLLFLESEDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTMQ +K+PV T CVG A + LLA G +G R +P SRI
Sbjct: 62 LYINSPGGVVTAGMAIYDTMQYIKAPVSTICVGQAASMGAVLLAAGAEGKRFTLPNSRIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI A E+LR+R+ + + L+ Q E I +D R G+++A
Sbjct: 122 IHQPLGGFQGQASDISIHAQEILRLREDLNRILAHHCSQDIETIARDTERDFFMGAEDAQ 181
Query: 252 EYGLIDRII 260
+YGLID+I+
Sbjct: 182 KYGLIDKIV 190
>gi|166363928|ref|YP_001656201.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|425467657|ref|ZP_18846936.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
gi|166086301|dbj|BAG01009.1| ATP-dependent protease [Microcystis aeruginosa NIES-843]
gi|389829532|emb|CCI29086.1| ATP-dependent Clp protease proteolytic subunit (Endopeptidase Clp)
[Microcystis aeruginosa PCC 9809]
Length = 200
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 75/188 (39%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETTGRGERAF-DIYSRLLRERIVFLGQEVTSDLANLIVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G+ G R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVSTICIGLAASMGAFLLSAGKPGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ TG+P + I +D R ++EAL+
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKQLLNEHLASHTGKPLDLIAEDTERDFFMSAEEALD 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|253681101|ref|ZP_04861904.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|331270305|ref|YP_004396797.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|416350488|ref|ZP_11680890.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
gi|253562950|gb|EES92396.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum D str. 1873]
gi|329126855|gb|AEB76800.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
botulinum BKT015925]
gi|338196268|gb|EGO88472.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
botulinum C str. Stockholm]
Length = 195
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ +++ ++ ++A +L+L++ D K +
Sbjct: 4 VPVVVEQTNRGERSY---DIYSRLLKDRIIFLGEEVNDVSASLVVAQLLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG +T +AIYDTMQ +K V T C+G A + FLL G KG R A+P S I
Sbjct: 61 YLYINSPGGSITAGMAIYDTMQYIKPDVSTICIGMAASMGAFLLTAGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A+ +L+++D + K LS +TG+P E I KD+ R + EA
Sbjct: 121 MIHQPLGGFQGQATDIGIHANRILKIKDKLNKILSERTGKPLEVIKKDVERDNFMEADEA 180
Query: 251 LEYGLIDRII 260
EYGLID +I
Sbjct: 181 KEYGLIDDVI 190
>gi|52082006|ref|YP_080797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|319647870|ref|ZP_08002088.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
gi|404490886|ref|YP_006714992.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|423684010|ref|ZP_17658849.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis WX-02]
gi|67460468|sp|Q65EI5.1|CLPP1_BACLD RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|52005217|gb|AAU25159.1| ATP-dependent Clp protease proteolytic subunit (class III
heat-shock protein) [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|52349895|gb|AAU42529.1| ATP-dependent Clp protease proteolytic subunit ClpP [Bacillus
licheniformis DSM 13 = ATCC 14580]
gi|317390211|gb|EFV71020.1| ATP-dependent Clp protease proteolytic subunit 1 [Bacillus sp.
BT1B_CT2]
gi|383440784|gb|EID48559.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
licheniformis WX-02]
Length = 198
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLEAEDPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +RD + K L+ +TGQP E I +D R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILSLRDKLNKILAERTGQPLEVIERDTDRDNFKTAEEAK 181
Query: 252 EYGLIDRII 260
EYGLID+++
Sbjct: 182 EYGLIDKVL 190
>gi|11497551|ref|NP_054959.1| ATP-dependent Clp protease proteolytic subunit [Spinacia oleracea]
gi|18203258|sp|Q9M3K5.1|CLPP_SPIOL RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|7636132|emb|CAB88752.1| ATP-dependent protease proteolytic subunit [Spinacia oleracea]
Length = 196
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 83/193 (43%), Positives = 125/193 (64%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD++N LYRER++F+GQ +D E SNQ++ M+YL DD+
Sbjct: 1 MPIGVPKVPFRSPGEEDASWVDVYNRLYRERLLFLGQEVDSEISNQLIGLMVYLSIEDDT 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG V P +AIYDTMQ ++ V T C+G A + F+L GGE R A P
Sbjct: 61 KDLYLFINSPGGWVIPGVAIYDTMQFVRPDVHTICMGLAASMGSFILVGGEITKRLAFPH 120
Query: 188 SRIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA + Q + EA+ELL++R+ + K ++TG+P +++D+ R
Sbjct: 121 ARVMIHQPASSFYEAQTGEFLLEAEELLKLRETLTKVYGQRTGKPLWVVSEDMERDVFMS 180
Query: 247 SQEALEYGLIDRI 259
+ EA +G+ID +
Sbjct: 181 ATEAQAHGIIDLV 193
>gi|219872047|ref|YP_002476422.1| ATP-dependent Clp protease proteolytic subunit [Haemophilus
parasuis SH0165]
gi|254763791|sp|B8F822.1|CLPP_HAEPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219692251|gb|ACL33474.1| ATP-dependent Clp protease proteolytic subunit ClpP [Haemophilus
parasuis SH0165]
Length = 193
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 117/182 (64%), Gaps = 3/182 (1%)
Query: 79 TPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG 138
+ GE ++ D+++ L +ER+IF+ +++E + I+A ML+L++ D K +Y+YIN PG
Sbjct: 12 SKGERAY---DIYSRLLKERIIFLNGGVEDEMAKLIIAQMLFLEAEDPEKDIYLYINSPG 68
Query: 139 GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA 198
G VT LAIYDTM +K V T C+G A + FLL+ G KG R A+P SR+ + P G
Sbjct: 69 GVVTAGLAIYDTMNFIKPDVSTLCMGQACSMGAFLLSAGAKGKRFALPNSRVMIHQPLGG 128
Query: 199 ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDR 258
RGQA DI+ A E+L++++ + ++++ QPFEK+ +D R ++EA YGLID
Sbjct: 129 YRGQATDIQIHAQEILKLKEMLTRKMAEHCSQPFEKVAQDTERDNFMSAEEAKAYGLIDD 188
Query: 259 II 260
++
Sbjct: 189 VV 190
>gi|253701609|ref|YP_003022798.1| ATP-dependent Clp protease proteolytic subunit [Geobacter sp. M21]
gi|259585955|sp|C6E2T0.1|CLPP_GEOSM RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|251776459|gb|ACT19040.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Geobacter sp.
M21]
Length = 199
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 120/189 (63%), Gaps = 2/189 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G ID+ +N ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIIFLGGGIDDNVANLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRYSLVNSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI A E+LR++D + L+ TGQ EK+ D R +EA
Sbjct: 121 IHQPLGGFQGQATDIHIHAKEILRMKDELNALLAEHTGQSVEKVAADTERDYFMSGEEAK 180
Query: 252 EYGLIDRII 260
YG+ID I+
Sbjct: 181 NYGIIDAIV 189
>gi|157374680|ref|YP_001473280.1| ATP-dependent Clp protease proteolytic subunit [Shewanella
sediminis HAW-EB3]
gi|189082467|sp|A8FTH9.1|CLPP_SHESH RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|157317054|gb|ABV36152.1| Endopeptidase Clp [Shewanella sediminis HAW-EB3]
Length = 203
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 118/190 (62%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++E +N I+A +L+L+S K +
Sbjct: 13 VPMVVEQTAKGERSY---DIYSRLLKERVIFLVGQVEEHMANLIVAQLLFLESESPDKDI 69
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG +G R +P SR+
Sbjct: 70 YLYINSPGGSVTAGMAIYDTMQFIKPNVSTVCIGQAASMGAFLLAGGAEGKRHCLPNSRV 129
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +++ + + L+ TGQP E I +D R + EA
Sbjct: 130 MIHQPLGGFQGQASDIAIHAQEILGIKNKLNQMLADHTGQPMEIIERDTDRDNFMSAAEA 189
Query: 251 LEYGLIDRII 260
EYGL+D ++
Sbjct: 190 AEYGLVDSVL 199
>gi|94958239|gb|ABF47251.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
xylosus]
Length = 194
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R + + L+ +TGQ EKI KD R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGL+D+++ P
Sbjct: 182 EYGLVDQVMVP 192
>gi|336420043|ref|ZP_08600289.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
gi|336162184|gb|EGN65166.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 11_3_2]
Length = 193
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
QA DI A+ELL+++D + + L++ TG+ E+I +D R S+EA+ YGLID + R
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNTGKTKEEILRDTERDNYLSSEEAVNYGLIDSVFR 192
>gi|408373741|ref|ZP_11171435.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
hongdengensis A-11-3]
gi|407766445|gb|EKF74888.1| ATP-dependent Clp protease, proteolytic subunitclpp [Alcanivorax
hongdengensis A-11-3]
Length = 218
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 122/194 (62%), Gaps = 6/194 (3%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A ML+L+S + K +
Sbjct: 27 VPVVIEQTSRGERSF---DIYSRLLKERVIFMIGQVEDHMANLIVAQMLFLESENPDKDI 83
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +++YDTMQ +K V T CVG A + FLLA G G R A+P +R+
Sbjct: 84 HLYINSPGGSVTAGMSVYDTMQFVKPDVSTMCVGQAASMGAFLLAAGAHGKRFALPNARV 143
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L+++ + L+ TGQP E++ KD R G++EA
Sbjct: 144 MIHQPLGGFQGQASDIEIHAKEILKIKGQLNNLLAHHTGQPLERLEKDTDRDNFMGAEEA 203
Query: 251 LEYGLIDRII--RP 262
EYGL+D ++ RP
Sbjct: 204 KEYGLVDAVLSRRP 217
>gi|257126078|ref|YP_003164192.1| ATP-dependent Clp protease proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
gi|257050017|gb|ACV39201.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Leptotrichia
buccalis C-1013-b]
Length = 203
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 121/193 (62%), Gaps = 2/193 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
M + +P V+ G G + D+++ L ++R+IF+ +++ +N I+A +L+LD+ D+
Sbjct: 13 MSVYSP-VVIENDGRGERSY-DIYSRLLKDRIIFVSGEVEDGMANAIVAQLLFLDAQDNE 70
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + MYIN PGG +T LAIYDTM+ +KS V T CVG A + LL+ G KG R ++P
Sbjct: 71 KDIVMYINSPGGVITAGLAIYDTMRHIKSDVSTVCVGQAASMGAVLLSAGAKGKRYSLPN 130
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G ARGQA DI+ +A E+ R+++ K LS TG+ E+I D R
Sbjct: 131 SRIMIHQPLGGARGQATDIQIQAKEIERMKEITSKILSEATGKSVEEIYADTERDNFMSP 190
Query: 248 QEALEYGLIDRII 260
+EA+ YGLID+I+
Sbjct: 191 EEAVNYGLIDKIL 203
>gi|124266485|ref|YP_001020489.1| ATP-dependent Clp protease proteolytic subunit ClpP [Methylibium
petroleiphilum PM1]
gi|189082491|sp|A2SFB5.1|CLPP_METPP RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|124259260|gb|ABM94254.1| ATP-dependent Clp protease proteolytic subunit ClpP [Methylibium
petroleiphilum PM1]
Length = 202
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 79/191 (41%), Positives = 122/191 (63%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G V+ G G + D+++ L RERVIF+ ++++ +N ++A +L+L+S + K
Sbjct: 9 LGMVPVVIEQSGRGERAY-DIYSRLLRERVIFLVGPVNDQTANLVVAQLLFLESENPDKD 67
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ +YIN PGG V+ L+I+DTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 68 ISLYINSPGGSVSAGLSIFDTMQFIKPDVSTLCMGIAASMGAFLLAAGAKGKRFALPNSR 127
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
+ + P+G A+GQA DI +A E+L++R+ + L+ +TGQP EKI D R ++E
Sbjct: 128 VMIHQPSGGAQGQATDIEIQAREILKLRESLNGILAERTGQPLEKIRADSERDYFMSAEE 187
Query: 250 ALEYGLIDRII 260
A YGLID++I
Sbjct: 188 ATGYGLIDKVI 198
>gi|15606541|ref|NP_213921.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
gi|6225158|sp|O67357.1|CLPP_AQUAE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|2983755|gb|AAC07315.1| ATP-dependent Clp protease proteolytic subunit [Aquifex aeolicus
VF5]
Length = 201
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/191 (42%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +TP GE ++ D+++ L ++R++ +G ID+ +N I+A +L+L+S D K +
Sbjct: 11 VPIVIEQTPRGERAY---DIYSRLLQDRIVLLGSPIDDHVANLIVAQLLFLESQDPDKDI 67
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTMQ +K V T C+G A + LLA G G R A+P SRI
Sbjct: 68 YLYINSPGGSVTAGLAIYDTMQYIKPDVVTICMGQAASMGAILLAAGAPGKRYALPHSRI 127
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A+E+ R+++ + L++ TGQP +KI D+ R EA
Sbjct: 128 MIHQPLGGIQGQATDIIIHAEEIKRIKEMLIDILAKHTGQPKDKIANDIERDYFMSPYEA 187
Query: 251 LEYGLIDRIIR 261
+YGLID++I
Sbjct: 188 KDYGLIDKVIE 198
>gi|404417286|ref|ZP_10999088.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
gi|403490299|gb|EJY95842.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus
arlettae CVD059]
Length = 194
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 117/191 (61%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLL+ G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLSAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R + K L+ +TGQ EKI KD R + EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTRAKLNKILAERTGQSIEKIEKDTDRDNFLSADEAK 181
Query: 252 EYGLIDRIIRP 262
EYGLID ++ P
Sbjct: 182 EYGLIDHVMEP 192
>gi|423557331|ref|ZP_17533634.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MC67]
gi|401193139|gb|EJR00146.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
MC67]
Length = 193
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 121/188 (64%), Gaps = 4/188 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + L+ +TGQP E + +D R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERAL 181
Query: 252 EYGLIDRI 259
EYGLID+I
Sbjct: 182 EYGLIDKI 189
>gi|423369117|ref|ZP_17346548.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD142]
gi|401078473|gb|EJP86784.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD142]
Length = 193
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 121/188 (64%), Gaps = 4/188 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + L+ +TGQP E + +D R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERAL 181
Query: 252 EYGLIDRI 259
EYGLID+I
Sbjct: 182 EYGLIDKI 189
>gi|253577702|ref|ZP_04855005.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
gi|251842907|gb|EES70953.1| clp protease [Paenibacillus sp. oral taxon 786 str. D14]
Length = 196
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 81/192 (42%), Positives = 115/192 (59%), Gaps = 2/192 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ +T G G + D+++ L ++R++F+G ID++ +N I+A ML+L + D K +Y
Sbjct: 6 PYVIEQT-GRGERSY-DIYSRLLKDRIVFLGSAIDDQVANSIMAQMLFLAAEDPEKDIYF 63
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG + AIYDTMQ +K V T C G A A LL G KG R A+P S I +
Sbjct: 64 YINSPGGSTSAGFAIYDTMQYVKPDVQTICSGMAASFAAILLMAGAKGKRFALPNSEIMI 123
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI A+ +LR R + + TGQP E+I KD+ R + EA E
Sbjct: 124 HQPHGGAQGQASDIAISANRILRTRAVLNTIAAECTGQPLERIEKDMDRDYFMSADEARE 183
Query: 253 YGLIDRIIRPPR 264
YG+ID++I P +
Sbjct: 184 YGIIDQVITPNK 195
>gi|167627759|ref|YP_001678259.1| ATP-dependent Clp protease proteolytic subunit [Francisella
philomiragia subsp. philomiragia ATCC 25017]
gi|254876856|ref|ZP_05249566.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
gi|189082458|sp|B0TZA5.1|CLPP_FRAP2 RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|167597760|gb|ABZ87758.1| Endopeptidase Clp [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|254842877|gb|EET21291.1| ATP-dependent Clp protease subunit P [Francisella philomiragia
subsp. philomiragia ATCC 25015]
Length = 201
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 114/190 (60%), Gaps = 2/190 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G + D+++ L +ER++F+ +++ +N ++A +L+L+S D K +Y
Sbjct: 7 VPTVIEKTAG--GERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPDKDIY 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
YIN PGG VT + +YDTMQ +K V T C+G A + LLAGG KG R ++P S+I
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVNTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA DI A +LR++D + K L+ TGQ E I +D R + EA
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVRDTDRDNFMMADEAK 184
Query: 252 EYGLIDRIIR 261
EYGLID +I
Sbjct: 185 EYGLIDHVIE 194
>gi|69214837|gb|AAZ03801.1| ATP-depedent Clp protease proteolytic subunit [Nuphar advena]
Length = 196
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 123/194 (63%), Gaps = 3/194 (1%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MPIG PKV +R+PGE WVD+ N L+RER++F+GQ +D E SNQ++ M+YL D++
Sbjct: 1 MPIGVPKVPFRSPGEEDAVWVDI-NRLHRERLLFLGQGVDSEISNQLVGLMVYLSMEDNT 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
+ +Y++IN PGG V P +AIYD MQ + V T C+G A + F+L GGE R A P
Sbjct: 60 RDLYLFINSPGGWVIPGIAIYDAMQIVPPDVHTICMGLAASMGSFILVGGEFTKRLAFPH 119
Query: 188 S-RIALDSPAGA-ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRF 245
+ R+ + PA + QA + EA+ELL++R+ + + ++TG+P +++D+ R
Sbjct: 120 ARRVMIHQPASSFYEAQAGEFILEAEELLKLREILTRVYVQRTGKPLWVVSEDMERDVFM 179
Query: 246 GSQEALEYGLIDRI 259
+ EA +G++D +
Sbjct: 180 SATEAQAHGIVDLV 193
>gi|116243153|sp|Q1Q8J2.2|CLPP_PSYCK RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
Length = 215
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 127/197 (64%), Gaps = 6/197 (3%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE S+ D+++ L RERVIF+ +++ +N I+A +L+L++ + K +
Sbjct: 22 VPMVVEQSARGERSF---DIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAENPDKDI 78
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LAI+DTM +K V T C+G AY + FLLA GEKG R A+ +R+
Sbjct: 79 HLYINSPGGSVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYALANARV 138
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI A E+L+ R + + L+ +TGQP +KI KD+ R ++EA
Sbjct: 139 MIHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQPVDKIEKDVERDYWLDAKEA 198
Query: 251 LEYGLIDRII--RPPRI 265
EYGLID ++ RP +
Sbjct: 199 KEYGLIDEVLERRPASL 215
>gi|347730688|ref|ZP_08863801.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. A2]
gi|347520543|gb|EGY27675.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Desulfovibrio
sp. A2]
Length = 201
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 120/197 (60%), Gaps = 4/197 (2%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+ ++ T G + D+++ L ++R+I +G ID++ ++ I A +L+L+S +
Sbjct: 1 MPV---PIVIETSGRSERAY-DIYSRLLKDRIILLGTPIDDQIASLICAQLLFLESENPE 56
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y+YIN PGG VT +AIYDTMQ + SPV T C+G A + LLA GE G R A+P
Sbjct: 57 KEIYLYINSPGGAVTAGMAIYDTMQYITSPVATLCLGQAASMGALLLAAGEPGMRHALPN 116
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P+G GQA DI +A E+LR++ + ++R TGQP E++ D R G
Sbjct: 117 SRIMIHQPSGGFSGQASDIDIQAREVLRMKANLNDIMARHTGQPVERVADDTERDYFMGP 176
Query: 248 QEALEYGLIDRIIRPPR 264
EA EYG+ID I+ R
Sbjct: 177 AEAKEYGIIDSILTSRR 193
>gi|222528715|ref|YP_002572597.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor bescii DSM 6725]
gi|312622971|ref|YP_004024584.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kronotskyensis 2002]
gi|222455562|gb|ACM59824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor bescii DSM 6725]
gi|312203438|gb|ADQ46765.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kronotskyensis 2002]
Length = 195
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R++ + I ++ ++ I+A +L+L++ D K +
Sbjct: 5 VPIVIEQTNRGERAY---DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT AIYDTMQ +K V T CVG A + FLLA G KG R A+P S I
Sbjct: 62 YLYINSPGGSVTAGFAIYDTMQYIKPDVSTICVGLAASMGAFLLAAGAKGKRFALPNSEI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G RGQA DI+ A+ +L++++ I K LS +TGQP E I +D R ++EA
Sbjct: 122 MIHQPLGGVRGQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEA 181
Query: 251 LEYGLIDRII 260
L+YG+ID++I
Sbjct: 182 LKYGIIDKVI 191
>gi|392971446|ref|ZP_10336842.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|403047222|ref|ZP_10902690.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
gi|392510838|emb|CCI60118.1| ATP-dependent Clp protease proteolytic subunit ClpP [Staphylococcus
equorum subsp. equorum Mu2]
gi|402762756|gb|EJX16850.1| ATP-dependent Clp protease proteolytic subunit [Staphylococcus sp.
OJ82]
Length = 194
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 119/191 (62%), Gaps = 4/191 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDAEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R + + L+ +TGQ EKI KD R ++EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTRAKLNQILAERTGQSIEKIEKDTDRDNFLSAEEAK 181
Query: 252 EYGLIDRIIRP 262
EYGL+D+++ P
Sbjct: 182 EYGLVDQVMVP 192
>gi|229014309|ref|ZP_04171428.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|229099577|ref|ZP_04230505.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|229105752|ref|ZP_04236381.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|229118641|ref|ZP_04247993.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|407707620|ref|YP_006831205.1| proton-translocating NADH-quinone oxidoreductase subunit L
[Bacillus thuringiensis MC28]
gi|423377055|ref|ZP_17354339.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1O-2]
gi|423440156|ref|ZP_17417062.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X2-1]
gi|423449686|ref|ZP_17426565.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5O-1]
gi|423463229|ref|ZP_17439997.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-1]
gi|423471294|ref|ZP_17448038.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-2]
gi|423490288|ref|ZP_17466970.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BtB2-4]
gi|423496012|ref|ZP_17472656.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER057]
gi|423497194|ref|ZP_17473811.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER074]
gi|423521016|ref|ZP_17497489.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA4-10]
gi|423532582|ref|ZP_17509000.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB2-9]
gi|423542155|ref|ZP_17518545.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB4-10]
gi|423548388|ref|ZP_17524746.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB5-5]
gi|423597605|ref|ZP_17573605.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD078]
gi|423613267|ref|ZP_17589127.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD107]
gi|423619156|ref|ZP_17594989.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD115]
gi|423621820|ref|ZP_17597598.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD148]
gi|423660050|ref|ZP_17635219.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM022]
gi|228664833|gb|EEL20323.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock1-3]
gi|228677641|gb|EEL31889.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-28]
gi|228683873|gb|EEL37823.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
Rock3-29]
gi|228746909|gb|EEL96793.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
DSM 2048]
gi|401127967|gb|EJQ35674.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5O-1]
gi|401149848|gb|EJQ57315.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER057]
gi|401162914|gb|EJQ70267.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
CER074]
gi|401169492|gb|EJQ76738.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB4-10]
gi|401176062|gb|EJQ83260.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB5-5]
gi|401180113|gb|EJQ87276.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA4-10]
gi|401239137|gb|EJR45569.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD078]
gi|401242429|gb|EJR48804.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD107]
gi|401251869|gb|EJR58139.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD115]
gi|401262849|gb|EJR68986.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD148]
gi|401303711|gb|EJS09272.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM022]
gi|401639657|gb|EJS57394.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1O-2]
gi|402419927|gb|EJV52199.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG4X2-1]
gi|402422100|gb|EJV54342.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-1]
gi|402429967|gb|EJV62049.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BtB2-4]
gi|402432774|gb|EJV64830.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6O-2]
gi|402464836|gb|EJV96524.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuB2-9]
gi|407385305|gb|AFU15806.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
thuringiensis MC28]
Length = 193
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 121/188 (64%), Gaps = 4/188 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRFALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + L+ +TGQP E + +D R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERAL 181
Query: 252 EYGLIDRI 259
EYGLID+I
Sbjct: 182 EYGLIDKI 189
>gi|163942836|ref|YP_001647720.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
weihenstephanensis KBAB4]
gi|228993855|ref|ZP_04153759.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
gi|228999881|ref|ZP_04159453.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|229007435|ref|ZP_04165032.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|229062796|ref|ZP_04200101.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|229135952|ref|ZP_04264713.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|229169852|ref|ZP_04297548.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|423388590|ref|ZP_17365816.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-3]
gi|423400026|ref|ZP_17377199.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-2]
gi|423416963|ref|ZP_17394052.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
gi|423451604|ref|ZP_17428457.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X1-1]
gi|423462074|ref|ZP_17438870.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X2-1]
gi|423479281|ref|ZP_17455996.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-1]
gi|423484826|ref|ZP_17461515.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-2]
gi|423513410|ref|ZP_17489940.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-1]
gi|423519803|ref|ZP_17496284.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-4]
gi|423595672|ref|ZP_17571702.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD048]
gi|423670666|ref|ZP_17645695.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM034]
gi|423673107|ref|ZP_17648046.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM062]
gi|163865033|gb|ABY46092.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Bacillus
weihenstephanensis KBAB4]
gi|228613566|gb|EEK70695.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH621]
gi|228647494|gb|EEL03568.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
BDRD-ST196]
gi|228716556|gb|EEL68259.1| ATP-dependent Clp protease proteolytic subunit [Bacillus cereus
AH603]
gi|228753823|gb|EEM03264.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock1-4]
gi|228759823|gb|EEM08797.1| ATP-dependent Clp protease proteolytic subunit [Bacillus mycoides
Rock3-17]
gi|228765911|gb|EEM14561.1| ATP-dependent Clp protease proteolytic subunit [Bacillus
pseudomycoides DSM 12442]
gi|401108381|gb|EJQ16312.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG3X2-1]
gi|401133929|gb|EJQ41552.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X2-1]
gi|401136677|gb|EJQ44263.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-2]
gi|401145312|gb|EJQ52838.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG5X1-1]
gi|401157944|gb|EJQ65340.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-4]
gi|401221566|gb|EJR28180.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VD048]
gi|401294953|gb|EJS00578.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM034]
gi|401311207|gb|EJS16515.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
VDM062]
gi|401642665|gb|EJS60371.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG1X1-3]
gi|401656653|gb|EJS74168.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG2X1-2]
gi|402425585|gb|EJV57731.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
BAG6X1-1]
gi|402445654|gb|EJV77523.1| ATP-dependent Clp protease proteolytic subunit 2 [Bacillus cereus
HuA2-1]
Length = 193
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 121/188 (64%), Gaps = 4/188 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L+S D K ++
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLESQDPEKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPQVSTICIGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + + L+ +TGQP E + +D R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNQILADRTGQPLEVLQRDTDRDNFMTAERAL 181
Query: 252 EYGLIDRI 259
EYGLID+I
Sbjct: 182 EYGLIDKI 189
>gi|302671762|ref|YP_003831722.1| ATP-dependent Clp protease proteolytic subunit ClpP [Butyrivibrio
proteoclasticus B316]
gi|302396235|gb|ADL35140.1| ATP-dependent Clp protease proteolytic subunit ClpP [Butyrivibrio
proteoclasticus B316]
Length = 201
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 126/198 (63%), Gaps = 5/198 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L +ER++F+G+ ++ ++ I+A +L+L++ D +K ++
Sbjct: 5 PYVIEQTSRGERSY---DIYSRLLKERIVFLGEEVNAASASTIVAQLLFLEAEDPNKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG+++ +AIYDTM +K V T C+G A + FLLAGG KG R A+P + +
Sbjct: 62 MYINSPGGEISSGMAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRMALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA +I A +L+ ++ + + L+ TG+ +E++ D R +QEAL
Sbjct: 122 IHQPLGGTQGQATEIEIAAKHILKTKEKMNRMLAANTGKSYEQVAADTERDNWLSAQEAL 181
Query: 252 EYGLIDRIIRP-PRIKED 268
+YGLID II P KED
Sbjct: 182 DYGLIDSIIENRPSEKED 199
>gi|418632534|ref|ZP_13194964.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
gi|374832104|gb|EHR95824.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus epidermidis VCU128]
Length = 194
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/193 (39%), Positives = 118/193 (61%), Gaps = 4/193 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSQIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+ +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIHHIKPDVQTICIGMAASMGSFLLAAGAKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + LS +TGQ EKI +D R + EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILSERTGQSIEKIQQDTDRDNFLTAAEAK 181
Query: 252 EYGLIDRIIRPPR 264
EYGLID ++ P +
Sbjct: 182 EYGLIDEVMEPEK 194
>gi|167855227|ref|ZP_02477997.1| bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase
[Haemophilus parasuis 29755]
gi|167853680|gb|EDS24924.1| bifunctional indole-3-glycerol phosphate
synthase/phosphoribosylanthranilate isomerase
[Haemophilus parasuis 29755]
Length = 193
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 74/182 (40%), Positives = 117/182 (64%), Gaps = 3/182 (1%)
Query: 79 TPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPG 138
+ GE ++ D+++ L +ER+IF+ +++E + I+A ML+L++ D K +Y+YIN PG
Sbjct: 12 SKGERAY---DIYSRLLKERIIFLNGGVEDEMAKLIIAQMLFLEAEDPEKDIYLYINSPG 68
Query: 139 GDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGA 198
G VT LAIYDTM +K V T C+G A + FLL+ G KG R A+P SR+ + P G
Sbjct: 69 GVVTAGLAIYDTMNFIKPDVSTLCMGQACSMGAFLLSSGAKGKRFALPNSRVMIHQPLGG 128
Query: 199 ARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDR 258
RGQA DI+ A E+L++++ + ++++ QPFEK+ +D R ++EA YGLID
Sbjct: 129 YRGQATDIQIHAQEILKLKEMLTRKMAEHCSQPFEKVAQDTERDNFMSAEEAKAYGLIDD 188
Query: 259 II 260
++
Sbjct: 189 VV 190
>gi|123967079|ref|YP_001012160.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
gi|123201445|gb|ABM73053.1| Clp protease proteolytic subunit [Prochlorococcus marinus str. MIT
9515]
Length = 204
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%), Gaps = 2/189 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER+IF+G I+++ ++ ++A +L+L++ D K + +
Sbjct: 15 PTVVEQS-GRGERAF-DIYSRLLRERIIFLGTGINDQVTDSLVAQLLFLEAEDPDKDIQI 72
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R A+P SRI +
Sbjct: 73 YINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRIMI 132
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA +I +A E+L ++ + LS TGQ EKI +D R +EA++
Sbjct: 133 HQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLSEHTGQSLEKINEDTERDYFLSPEEAVQ 192
Query: 253 YGLIDRIIR 261
YGLID++I+
Sbjct: 193 YGLIDKVIK 201
>gi|375264871|ref|YP_005022314.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. EJY3]
gi|369840195|gb|AEX21339.1| ATP-dependent Clp protease proteolytic subunit [Vibrio sp. EJY3]
Length = 208
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 125/200 (62%), Gaps = 7/200 (3%)
Query: 66 AMMPIG---TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
AM PI P V+ +T GE S+ D+++ L +ERVIF+ +++ +N ++A +L+L
Sbjct: 8 AMSPIMDALVPMVVEQTSRGERSY---DIYSRLLKERVIFLTGQVEDHMANLVVAQLLFL 64
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
+S + K +++YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG G
Sbjct: 65 ESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGK 124
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSR 241
R +P SR+ + P G +GQA DI+ A E+L ++ + K L+ TGQP E I +D R
Sbjct: 125 RYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDR 184
Query: 242 IKRFGSQEALEYGLIDRIIR 261
+++A+EYG++D ++R
Sbjct: 185 DNFMSAEQAVEYGIVDAVLR 204
>gi|220928259|ref|YP_002505168.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
cellulolyticum H10]
gi|254763787|sp|B8I8F5.1|CLPP_CLOCE RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|219998587|gb|ACL75188.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Clostridium
cellulolyticum H10]
Length = 194
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/190 (44%), Positives = 116/190 (61%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +R+I + +++ ++ I+A MLYL++ D K +
Sbjct: 4 VPMVVEQTNRGERSY---DIFSRLLNDRIIVLSDEVNDATASLIVAQMLYLEAQDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S I
Sbjct: 61 QFYINSPGGSVASGFAIYDTMQYVKCDVSTICMGMAASMGAFLLAAGEKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G ARGQA DI+ A+ +LR RD + K LS +TGQP +KI KD R + EA
Sbjct: 121 MIHQPLGGARGQATDIKIHAENILRTRDKLNKILSERTGQPLDKIEKDTERDFFMSADEA 180
Query: 251 LEYGLIDRII 260
YG+ID I+
Sbjct: 181 KAYGIIDDIM 190
>gi|374339257|ref|YP_005095993.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
gi|372100791|gb|AEX84695.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Marinitoga
piezophila KA3]
Length = 198
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 77/173 (44%), Positives = 112/173 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IF+G +++ SN I+A ML+L++ D K +Y+YIN PGG +T LAIY
Sbjct: 20 DIYSRLLKDRIIFLGSEVNDYVSNLIVAQMLFLEAQDPEKDIYLYINSPGGSITAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G KG R A+P SRI + P G A+G A DI
Sbjct: 80 DTMQYIKPDVSTICIGQAASMGAVLLTAGAKGKRFALPNSRIMIHQPWGGAQGTAKDIEI 139
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
+A E+LR++ + K LS TG+ +I KD R ++EA EYGLID++I+
Sbjct: 140 QAQEILRMKKMLNKILSEHTGKDVSQIEKDADRDFFMSAEEAKEYGLIDKVIK 192
>gi|410582587|ref|ZP_11319693.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermaerobacter subterraneus DSM 13965]
gi|410505407|gb|EKP94916.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermaerobacter subterraneus DSM 13965]
Length = 199
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 122/198 (61%), Gaps = 4/198 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R++FIG ID+ +N ++A +L+L + D + +
Sbjct: 4 VPYVIEQTNRGERAY---DIYSRLLKDRIVFIGTPIDDVVANSVIAQLLFLQTDDPDRDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V LAIYDTMQ +K V T+CVG A + LLAGG KG R A+P SRI
Sbjct: 61 SIYINSPGGSVDSGLAIYDTMQHIKPDVATYCVGLAASMGAILLAGGTKGKRYALPHSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A D++ AD+LL++R + L++ TGQP E+I +D R ++EA
Sbjct: 121 MIHQPHSQVGGTAADVKIYADQLLKLRQVANEILAKHTGQPLERIERDTERDFFMTAEEA 180
Query: 251 LEYGLIDRIIRPPRIKED 268
EYG+ID ++ P + D
Sbjct: 181 KEYGIIDHVLEPRSKRSD 198
>gi|312128165|ref|YP_003993039.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor hydrothermalis 108]
gi|312134617|ref|YP_004001955.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor owensensis OL]
gi|312792981|ref|YP_004025904.1| ATP-dependent clp protease, proteolytic subunit clpp
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|344996808|ref|YP_004799151.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
gi|311774668|gb|ADQ04155.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor owensensis OL]
gi|311778184|gb|ADQ07670.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor hydrothermalis 108]
gi|312180121|gb|ADQ40291.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Caldicellulosiruptor kristjanssonii 177R1B]
gi|343965027|gb|AEM74174.1| ATP-dependent Clp protease proteolytic subunit
[Caldicellulosiruptor lactoaceticus 6A]
Length = 195
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R++ + I ++ ++ I+A +L+L++ D K +
Sbjct: 5 VPIVIEQTNRGERAY---DIYSRLLKDRIVILSGEITDDIASLIVAQLLFLEAEDPDKDI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT AIYDTMQ +K V T CVG A + FLLA G KG R A+P S I
Sbjct: 62 YLYINSPGGSVTAGFAIYDTMQYIKPDVSTICVGMAASMGAFLLAAGAKGKRFALPNSEI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G RGQA DI+ A+ +L++++ I K LS +TGQP E I +D R ++EA
Sbjct: 122 MIHQPLGGVRGQATDIKIHAEWILKIKNRINKILSERTGQPIEVIERDTDRDFFMTAEEA 181
Query: 251 LEYGLIDRII 260
L+YG+ID++I
Sbjct: 182 LKYGIIDKVI 191
>gi|443312110|ref|ZP_21041730.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
gi|442777788|gb|ELR88061.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Synechocystis
sp. PCC 7509]
Length = 202
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 115/186 (61%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L RER++F+GQ +D +N I+A +L+LD+ D K +++YI
Sbjct: 4 IVIEQSGRGERAF-DIYSRLLRERIVFLGQKVDSNLANLIVAQLLFLDAEDAEKDIFLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG VT + I+DT++ ++ V T C G A + FLL+ G KG R ++P SRI +
Sbjct: 63 NSPGGSVTAGMGIFDTIKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPNSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L + + + L+ TGQP EKI +D R EA +YG
Sbjct: 123 PLGGAQGQATDIEIQAKEILYHKRKLNEHLAEHTGQPLEKIAEDTERDFFMSPTEAKDYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|428300044|ref|YP_007138350.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
gi|428236588|gb|AFZ02378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Calothrix sp.
PCC 6303]
Length = 231
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
+P T ++ G G + D+++ L RER+IF+G ID+ +N I+A +L+LD+ D
Sbjct: 24 IPGNTIPMVVEQSGMGERSF-DIYSRLLRERIIFLGTPIDDNVANSIVAQLLFLDAEDSE 82
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K + +YIN PGG V +AIYDT+Q ++ V T C G A + FLL G G R ++P
Sbjct: 83 KDIQLYINSPGGSVYAGMAIYDTIQQIRPDVVTICFGLAASMGAFLLTSGTAGKRMSLPD 142
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G A+GQA DI +A E+L V+ + K ++ TGQP E+IT D R +
Sbjct: 143 SRIMIHQPLGGAQGQAIDIEIQAREILYVKAELNKMMAHHTGQPLERITADTERDFFMSA 202
Query: 248 QEALEYGLIDRII 260
+EA YGLID++I
Sbjct: 203 EEAKNYGLIDQVI 215
>gi|398808177|ref|ZP_10567045.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
sp. CF313]
gi|398088223|gb|EJL78790.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
sp. CF313]
Length = 202
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ER+IF+ ++++ +N ++A +L+L+S + K
Sbjct: 9 LGMVPMVIEQSGRGERSY-DIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESENPDKD 67
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ YIN PGG V+ +AIYDTMQ +K V T C+GFA + FLLA GEKG R ++P S+
Sbjct: 68 ISFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCLGFAASMGAFLLAAGEKGKRFSLPNSK 127
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + G ARGQA DI A ++LR +D + + L+ +TGQP EK+ D R + E
Sbjct: 128 IMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKTDTERDYFLTADE 187
Query: 250 ALEYGLIDRII 260
A EYGL+D+++
Sbjct: 188 AKEYGLVDQVV 198
>gi|325662430|ref|ZP_08151036.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|331086220|ref|ZP_08335302.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
gi|325471264|gb|EGC74488.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 4_1_37FAA]
gi|330406379|gb|EGG85893.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 9_1_43BFAA]
Length = 193
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ +++ ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVNDVSASVIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQFIKCDVSTTCIGMAASMGAFLLAGGAKGKRYALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI+ AD +L+ R + K L+ TGQ I D R ++EA
Sbjct: 121 MIHQPSGGAQGQATDIKIVADHILKTRTKLNKILAENTGQDLSVIEVDTERDNYMSAEEA 180
Query: 251 LEYGLIDRII 260
YGLID +I
Sbjct: 181 KAYGLIDEVI 190
>gi|443479146|ref|ZP_21068788.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
gi|443015411|gb|ELS30378.1| ATP-dependent Clp protease proteolytic subunit ClpP [Pseudanabaena
biceps PCC 7429]
Length = 198
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 119/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L RER++F+GQ +D+ SN I+A +L+L++ D K +++
Sbjct: 3 PTVIEQS-GRGERAF-DIFSRLLRERIVFLGQQVDDSISNIIVAQLLFLEADDPEKDIFL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT +AIYDTMQ ++ V T CVG A + FLL GG KG R ++P +RI +
Sbjct: 61 YINSPGGSVTAGMAIYDTMQHIRPDVSTICVGLAASMGAFLLTGGAKGKRLSLPHTRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L + + + ++ TGQP ++I +D R EA
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYHKSRLNELMAFHTGQPIDRIAEDTDRDFFMSPYEAKN 180
Query: 253 YGLIDRII 260
YGLID ++
Sbjct: 181 YGLIDEVV 188
>gi|334128684|ref|ZP_08502565.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
gi|333386421|gb|EGK57635.1| ATP-dependent Clp protease, protease subunit [Centipeda periodontii
DSM 2778]
Length = 203
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/176 (44%), Positives = 113/176 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A +L+L+S D K +++YIN PGG VT LAIY
Sbjct: 20 DIYSRLLKERIIFLGGPIDDSVANVVVAQLLFLESEDPDKDIHLYINSPGGVVTAGLAIY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G G R A+P +RI + P G A+GQ+ DI+
Sbjct: 80 DTMQYIKPDVSTICIGQAASMGSILLTAGAAGKRYALPHARIMIHQPLGGAQGQSTDIQI 139
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPR 264
+A E+LR+R+ L+R TGQ EKI D R ++EA EYGLID ++ P+
Sbjct: 140 QAKEILRLREVGNNILARHTGQDPEKINVDTERDNFMSAEEAKEYGLIDEVVTRPK 195
>gi|292670226|ref|ZP_06603652.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
gi|292648178|gb|EFF66150.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas noxia
ATCC 43541]
Length = 197
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 78/178 (43%), Positives = 114/178 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A ML+L+S D K +++YIN PGG VT LAIY
Sbjct: 14 DIYSRLLKERIIFLGGPIDDSVANVVVAQMLFLESEDPDKDIHLYINSPGGVVTAGLAIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A + LL G KG R A+P +RI + P G A+GQ+ DI+
Sbjct: 74 DTMQYIKPDVSTICIGQAASMGSILLTAGAKGKRYALPHARIMIHQPLGGAQGQSTDIQI 133
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIK 266
+A E+LR+R+ L+R TGQ +KI D R ++EA YGLID ++ P+ +
Sbjct: 134 QAKEILRLREVGNHILARHTGQDEKKINVDTERDNFMSAEEAKAYGLIDEVVTRPKTE 191
>gi|343503058|ref|ZP_08740893.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
ATCC 19109]
gi|418480506|ref|ZP_13049564.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
gi|342812728|gb|EGU47720.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
ATCC 19109]
gi|384571898|gb|EIF02426.1| ATP-dependent Clp protease proteolytic subunit [Vibrio tubiashii
NCIMB 1337 = ATCC 19106]
Length = 208
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 80/199 (40%), Positives = 124/199 (62%), Gaps = 7/199 (3%)
Query: 66 AMMPIG---TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
AM PI P V+ +T GE S+ D+++ L +ER+IF+ ++++ +N ++A +L+L
Sbjct: 8 AMSPILNALVPMVVEQTSRGERSY---DIYSRLLKERIIFLTGQVEDQMANLVVAQLLFL 64
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
+S + K +++YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG G
Sbjct: 65 ESENPDKDIFLYINSPGGSVTAGMSIYDTMQYIKPNVSTVCMGQACSMGAFLLAGGAPGK 124
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSR 241
R +P SR+ + P G +GQA DI+ A E+L ++ + K L+ TGQP E I +D R
Sbjct: 125 RHVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDR 184
Query: 242 IKRFGSQEALEYGLIDRII 260
S +A+EYGL+D ++
Sbjct: 185 DNFMSSDQAVEYGLVDSVL 203
>gi|428213615|ref|YP_007086759.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
gi|428001996|gb|AFY82839.1| ATP-dependent Clp protease proteolytic subunit ClpP [Oscillatoria
acuminata PCC 6304]
Length = 201
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ ++ G G + D+++ L R+R++F+GQ +D + +N I+A +L+L++ D K +Y+
Sbjct: 3 PTVIEQS-GRGERAF-DIYSRLLRDRIVFLGQQVDADLANLIVAQLLFLEAEDAEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT + I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVTAGMGIFDTMNHIRPDVSTICLGLAASMGAFLLSAGAKGKRMSLPHSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L + + LS TGQP E+I +D R ++E+++
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYHKKRLNTLLSEHTGQPLERIEQDTERDFFMSAKESVD 180
Query: 253 YGLIDRII 260
YGLID +I
Sbjct: 181 YGLIDLVI 188
>gi|410666834|ref|YP_006919205.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
gi|409104581|gb|AFV10706.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermacetogenium phaeum DSM 12270]
Length = 201
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G ID+ +N I+A ML+L++ D K +
Sbjct: 8 VPIVVEQTSRGERSY---DIYSRLLKDRIIFLGTPIDDSVANIIIAQMLFLEAEDPEKDI 64
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG +T LAI+DTM+ +K V T CVG A + FLLA G K R A P S I
Sbjct: 65 YLYINSPGGSITAGLAIFDTMRYVKPDVSTICVGMAASMGAFLLAAGAKKKRFATPNSEI 124
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA D+ A +++VRD + + L+ TGQ E+I++D R ++EA
Sbjct: 125 MIHQPMGGAQGQATDVEIHARRIVKVRDRLNRILAELTGQSVERISRDTDRDTFMDAEEA 184
Query: 251 LEYGLIDRII 260
EYG+ID +I
Sbjct: 185 KEYGIIDEVI 194
>gi|441506114|ref|ZP_20988091.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
AK15]
gi|441426253|gb|ELR63738.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium sp.
AK15]
Length = 207
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 79/200 (39%), Positives = 125/200 (62%), Gaps = 7/200 (3%)
Query: 66 AMMPIG---TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
AM PI P V+ +T GE S+ D+++ L +ERVIF+ +++ +N ++A +L+L
Sbjct: 8 AMSPIMDALVPMVVEQTSRGERSY---DIYSRLLKERVIFLTGQVEDHMANLVVAQLLFL 64
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
+S + K +++YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG +G
Sbjct: 65 ESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAQGK 124
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSR 241
R +P SR+ + P G +GQA DI+ A E+L ++ + L+ TGQP E + +D R
Sbjct: 125 RYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVVERDTDR 184
Query: 242 IKRFGSQEALEYGLIDRIIR 261
+++A+EYGL+D ++R
Sbjct: 185 DNFMSAEQAVEYGLVDAVLR 204
>gi|411118654|ref|ZP_11391035.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
gi|410712378|gb|EKQ69884.1| protease subunit of ATP-dependent protease [Oscillatoriales
cyanobacterium JSC-12]
Length = 221
Score = 156 bits (395), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 83/211 (39%), Positives = 119/211 (56%), Gaps = 15/211 (7%)
Query: 74 KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMY 133
+V Y PG WQWV+++ L +ER+IF+ Q I +N +++ +LYLDS D SK +Y+Y
Sbjct: 6 RVPYNLPGSPYWQWVNIYTRLSQERIIFLNQPITAGLANSLVSALLYLDSEDQSKPIYIY 65
Query: 134 INGPGG--------------DVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEK 179
IN G V LAIYDTMQ +KS + T C+G A ++ LL+ G K
Sbjct: 66 INSYGDPVAAGMSDESVGLMSVAAGLAIYDTMQHVKSEIVTICLGQAIGMSAVLLSSGTK 125
Query: 180 GNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDL 239
G R ++P S IAL+ RGQA DI+ A E++ R I L++ TGQ EKI +D+
Sbjct: 126 GKRGSLPHSMIALNHTLSGTRGQASDIQVNAQEVIAKRSLILDILAKNTGQSVEKIARDM 185
Query: 240 SRIKRFGSQEALEYGLIDRIIRPPRIKEDMP 270
R Q+A +YGLID ++ + K +P
Sbjct: 186 DRTFYMTPQQAKDYGLIDHVLESSK-KASLP 215
>gi|376004076|ref|ZP_09781843.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
gi|375327546|emb|CCE17596.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [Arthrospira sp. PCC 8005]
Length = 200
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/182 (43%), Positives = 113/182 (62%), Gaps = 4/182 (2%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
DL++ L R+R+IF+G ID+E +N + A ML+L+S D K + +YIN PGG VT + IY
Sbjct: 14 DLYSRLLRDRIIFLGTPIDDEVANAVSAQMLFLESEDPEKDIQLYINSPGGSVTAGMGIY 73
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLLA G G R ++P SRI + P G A+GQA DI
Sbjct: 74 DTMQQIRPDVVTICYGLAASMGAFLLASGTAGKRMSLPSSRIMIHQPLGGAQGQAIDIEI 133
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+L + + L++ TGQP E+I D R + EA EYGLID +I +K++
Sbjct: 134 QAKEILYHKHTLNTLLAQHTGQPIERINADTERDFFMSAAEAQEYGLIDNVI----LKQN 189
Query: 269 MP 270
+P
Sbjct: 190 LP 191
>gi|374301124|ref|YP_005052763.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
gi|332554060|gb|EGJ51104.1| ATP-dependent Clp protease proteolytic subunit [Desulfovibrio
africanus str. Walvis Bay]
Length = 206
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 116/193 (60%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP ++ T G + D+++ L R+R+I +G ID+ + I A +L+L+S D
Sbjct: 1 MPFAQVPIVIETTGRTERAY-DIYSRLLRDRIILLGYPIDDHIAGLICAQLLFLESEDPD 59
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +YMYIN PGG VT +AIYDTM + PV T C+G A + FLL+ G KG R ++P
Sbjct: 60 KEIYMYINSPGGSVTAGMAIYDTMGYISCPVSTLCIGQAASMGAFLLSSGTKGMRFSLPN 119
Query: 188 SRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
SRI + P G +GQA DI A E+LR+R + + L+ TG+ +I +D R +
Sbjct: 120 SRILIHQPMGGFQGQASDIDIHAREILRMRADLNRILAENTGKDLAQIERDTDRDYFMSA 179
Query: 248 QEALEYGLIDRII 260
QEALEYGLID+I+
Sbjct: 180 QEALEYGLIDKIM 192
>gi|381211603|ref|ZP_09918674.1| ATP-dependent Clp protease proteolytic subunit [Lentibacillus sp.
Grbi]
Length = 197
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L++ D K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSGIDDNVANSIVAQLLFLEAEDPDKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C G A + FLLA GEKG R A+P S +
Sbjct: 62 LYINSPGGSITAGMAIYDTMQFIKPNVSTICTGMAASMGAFLLAAGEKGKRYALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI A ++++++ + K LS +TGQP E + +D R ++E++
Sbjct: 122 IHQPLGGTQGQATDIEIHARRIIQMKEKMNKILSERTGQPLEVVERDTDRDNFKSAEESV 181
Query: 252 EYGLIDRIIR 261
EYGLID+I+
Sbjct: 182 EYGLIDKILE 191
>gi|427405940|ref|ZP_18896145.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
gi|425708781|gb|EKU71820.1| ATP-dependent Clp protease proteolytic subunit [Selenomonas sp.
F0473]
Length = 206
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/187 (41%), Positives = 118/187 (63%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L +ER+IF+G ID+ +N ++A ML+L+S D K +++YIN PGG VT LA+Y
Sbjct: 20 DIYSRLLKERIIFLGGPIDDNVANVVIAQMLFLESEDPDKDIHLYINSPGGVVTAGLAMY 79
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K V T C+G A +A LLA G G R A+P +RI + P+G A+GQ+ DI+
Sbjct: 80 DTMQYIKPDVSTICIGQAASMASILLAAGAPGKRYALPQARIMIHQPSGGAQGQSTDIQI 139
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRIKED 268
+A E+LR+R+ + L++ TGQ E I D R +++A YGLID ++ P+
Sbjct: 140 QAKEILRLRETANEILAKHTGQKPEAINVDTERDNFMSAEDAKAYGLIDEVVVRPKAAAS 199
Query: 269 MPRKDAG 275
K+ G
Sbjct: 200 KESKNKG 206
>gi|75906770|ref|YP_321066.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
gi|110816454|sp|Q3MFR5.1|CLPP1_ANAVT RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|75700495|gb|ABA20171.1| ATP-dependent Clp protease proteolytic subunit ClpP [Anabaena
variabilis ATCC 29413]
Length = 204
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/193 (41%), Positives = 117/193 (60%), Gaps = 9/193 (4%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
T ++ G G + D+++ L RER+IF+GQ +D +N I+A +L+LD+ D K +Y
Sbjct: 2 TIPIVIEQSGRGERAF-DIYSRLLRERIIFLGQQVDSNLANLIVAQLLFLDAEDPEKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI
Sbjct: 61 LYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGTKGKRMSLPHSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELL----RVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+ P G A+GQA DI +A E+L R+ DY L+ TGQP E+I +D R
Sbjct: 121 IHQPLGGAQGQATDIEIQAREILYHKRRLNDY----LAEHTGQPIERIAEDTERDFFMSP 176
Query: 248 QEALEYGLIDRII 260
EA +YGLID++I
Sbjct: 177 DEARDYGLIDQVI 189
>gi|310657900|ref|YP_003935621.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [[Clostridium] sticklandii]
gi|308824678|emb|CBH20716.1| proteolytic subunit of ClpA-ClpP and ClpX-ClpP ATP-dependent serine
proteases [[Clostridium] sticklandii]
Length = 194
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 77/189 (40%), Positives = 121/189 (64%), Gaps = 2/189 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G +++ ++ I+A +L+L+S D K ++
Sbjct: 4 VPIVIEQT-GRGERSY-DIYSRLLKDRIIFLGDQVNDHTASLIVAQLLHLESEDPDKDIF 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T CVG A + FLL G KG R A+P S I
Sbjct: 62 LYINSPGGSITAGMAIYDTMQYIKPDVATICVGMAASMGAFLLTAGAKGKRFALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI+ A+ ++R+R+ + + ++ ++GQP EKI +D R S EA
Sbjct: 122 IHQPLGGTQGQATDIKIHAERIIRMRNKLNEIMADRSGQPLEKIERDTERDFFMSSTEAK 181
Query: 252 EYGLIDRII 260
EYGLID ++
Sbjct: 182 EYGLIDEVL 190
>gi|228474429|ref|ZP_04059164.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|314936932|ref|ZP_07844279.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|418619476|ref|ZP_13182304.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
gi|228271788|gb|EEK13135.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis SK119]
gi|313655551|gb|EFS19296.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis subsp. hominis C80]
gi|374824522|gb|EHR88480.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Staphylococcus hominis VCU122]
Length = 195
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 121/198 (61%), Gaps = 8/198 (4%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ T GE ++ D+++ L ++R+I +G ID+ +N I++ +L+L + D K +Y
Sbjct: 5 PTVIETTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVSQLLFLQAQDSEKDIY 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT AIYDT+Q +K V T C+G A + FLLA G KG R A+P + +
Sbjct: 62 LYINSPGGSVTAGFAIYDTIQHIKPDVQTICIGMAASMGSFLLAAGTKGKRFALPNAEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A+ +L+ R+ + + L+ +TGQ E I KD R + EA
Sbjct: 122 IHQPLGGAQGQATEIEIAANHILKTREKLNRILAERTGQNIETIQKDTDRDNFLTADEAK 181
Query: 252 EYGLIDRIIRPPRIKEDM 269
EYGLID +++P EDM
Sbjct: 182 EYGLIDHVMQP----EDM 195
>gi|126700924|ref|YP_001089821.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|254976904|ref|ZP_05273376.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-66c26]
gi|255094290|ref|ZP_05323768.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CIP 107932]
gi|255308377|ref|ZP_05352548.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile ATCC 43255]
gi|255316044|ref|ZP_05357627.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-76w55]
gi|255518701|ref|ZP_05386377.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-97b34]
gi|255651823|ref|ZP_05398725.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-37x79]
gi|255657263|ref|ZP_05402672.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-23m63]
gi|260684849|ref|YP_003216134.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260688507|ref|YP_003219641.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296451896|ref|ZP_06893613.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296879709|ref|ZP_06903684.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|306521610|ref|ZP_07407957.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile QCD-32g58]
gi|384362518|ref|YP_006200370.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile BI1]
gi|423081791|ref|ZP_17070390.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|423085912|ref|ZP_17074347.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|423089385|ref|ZP_17077744.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
gi|115252361|emb|CAJ70202.1| ATP-dependent Clp protease proteolytic subunit 1 [Clostridium
difficile 630]
gi|260211012|emb|CBA66324.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile CD196]
gi|260214524|emb|CBE07039.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile R20291]
gi|296259278|gb|EFH06156.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP08]
gi|296429298|gb|EFH15170.1| ATP-dependent Clp protease proteolytic subunit [Clostridium
difficile NAP07]
gi|357548303|gb|EHJ30169.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 050-P50-2011]
gi|357549864|gb|EHJ31702.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 002-P50-2011]
gi|357558182|gb|EHJ39684.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Clostridium difficile 70-100-2010]
Length = 194
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/188 (41%), Positives = 118/188 (62%), Gaps = 2/188 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R+IF+G +++ + I+A +L+L++ D K ++
Sbjct: 4 VPVVVEQT-GRGERSY-DIFSRLLKDRIIFLGDQVNDATAGLIVAQLLFLEAEDPDKDIH 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA G KG R A+P S I
Sbjct: 62 LYINSPGGSITSGMAIYDTMQYIKPDVSTICIGMAASMGAFLLAAGAKGKRLALPNSEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI A +L++++ + + LS +TGQP EKI D R + EA
Sbjct: 122 IHQPLGGAQGQATDIEIHAKRILKIKETLNEILSERTGQPLEKIKMDTERDNFMSALEAK 181
Query: 252 EYGLIDRI 259
EYGLID +
Sbjct: 182 EYGLIDEV 189
>gi|93007058|ref|YP_581495.1| ATP-dependent Clp protease proteolytic subunit [Psychrobacter
cryohalolentis K5]
gi|92394736|gb|ABE76011.1| ATP-dependent Clp protease proteolytic subunit ClpP [Psychrobacter
cryohalolentis K5]
Length = 231
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 82/197 (41%), Positives = 127/197 (64%), Gaps = 6/197 (3%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ GE S+ D+++ L RERVIF+ +++ +N I+A +L+L++ + K +
Sbjct: 38 VPMVVEQSARGERSF---DIFSRLLRERVIFLTGQVEDHMANLIVAQLLFLEAENPDKDI 94
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ LAI+DTM +K V T C+G AY + FLLA GEKG R A+ +R+
Sbjct: 95 HLYINSPGGSVSAGLAIFDTMNFIKPEVSTICMGGAYSMGSFLLAAGEKGKRYALANARV 154
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI A E+L+ R + + L+ +TGQP +KI KD+ R ++EA
Sbjct: 155 MIHQPSGGAQGQATDIEINAREILKTRARLNEILAERTGQPVDKIEKDVERDYWLDAKEA 214
Query: 251 LEYGLIDRII--RPPRI 265
EYGLID ++ RP +
Sbjct: 215 KEYGLIDEVLERRPASL 231
>gi|33862212|ref|NP_893773.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
gi|67460514|sp|Q7UZK7.1|CLPP3_PROMP RecName: Full=ATP-dependent Clp protease proteolytic subunit 3;
AltName: Full=Endopeptidase Clp 3
gi|33634430|emb|CAE20115.1| Clp protease proteolytic subunit [Prochlorococcus marinus subsp.
pastoris str. CCMP1986]
Length = 215
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 80/191 (41%), Positives = 121/191 (63%), Gaps = 2/191 (1%)
Query: 71 GTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++ G G + D+++ L RER+IF+G I+++ S+ ++A +L+L++ D K +
Sbjct: 24 AVPTVVEQS-GRGERAF-DIYSRLLRERIIFLGTGINDQVSDSLVAQLLFLEAEDPHKDI 81
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG VT LAIYDTMQ + V T C G A + FLL+GG KG R A+P SRI
Sbjct: 82 QIYINSPGGSVTAGLAIYDTMQQISPDVVTICFGVAASMGAFLLSGGAKGKRLALPNSRI 141
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA +I +A E+L ++ + L++ T Q EKI +D R +EA
Sbjct: 142 MIHQPLGGAQGQAVEIEIQAKEILFLKKTLNSLLAKHTNQSLEKINEDTERDYFLSPEEA 201
Query: 251 LEYGLIDRIIR 261
+EYGLID++I+
Sbjct: 202 VEYGLIDKVIK 212
>gi|299143348|ref|ZP_07036428.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 386 str. F0131]
gi|298517833|gb|EFI41572.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Peptoniphilus
sp. oral taxon 386 str. F0131]
Length = 194
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 124/191 (64%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRT-PGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+ I++ ++ ++A +L+L++ D +K +
Sbjct: 4 VPMVVEQTNHGERSY---DIYSRLLKERIIFLSGEINDVTADLVVAQLLFLEAEDQNKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V+ AIYDT++ +K V T +G A + FLLA G KG R A+P + I
Sbjct: 61 QIYINSPGGSVSAGFAIYDTIKYIKCDVSTMVIGLAASMGAFLLAAGTKGKRFALPNADI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA DI+ A+++L +R+ I K LS +TGQP EK+ +D R ++EA
Sbjct: 121 MIHQPLGGAQGQASDIKIHAEKILEIRERINKILSEETGQPLEKVERDTDRDYYLSAKEA 180
Query: 251 LEYGLIDRIIR 261
+EYGLID++I
Sbjct: 181 VEYGLIDKVIE 191
>gi|269102129|ref|ZP_06154826.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
gi|268162027|gb|EEZ40523.1| ATP-dependent Clp protease proteolytic subunit [Photobacterium
damselae subsp. damselae CIP 102761]
Length = 207
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 123/199 (61%), Gaps = 7/199 (3%)
Query: 66 AMMPIG---TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
AM PI P V+ +T GE S+ D+++ L +ERVIF+ +++ +N ++A +L+L
Sbjct: 8 AMSPILDALVPMVVEQTSRGERSY---DIYSRLLKERVIFLTGQVEDHMANLVVAQLLFL 64
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
+S + K +Y+YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG KG
Sbjct: 65 ESENPDKDIYLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAKGK 124
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSR 241
R +P SR+ + P G +GQA DI+ A E+L ++ + L+ TGQP E I +D R
Sbjct: 125 RYCLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNNLLAEHTGQPLEVIERDTDR 184
Query: 242 IKRFGSQEALEYGLIDRII 260
+ +A+EYGL+D ++
Sbjct: 185 DNFMSADQAVEYGLVDAVL 203
>gi|239815493|ref|YP_002944403.1| ATP-dependent Clp protease proteolytic subunit [Variovorax
paradoxus S110]
gi|259491242|sp|C5CJT4.1|CLPP_VARPS RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|239802070|gb|ACS19137.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Variovorax
paradoxus S110]
Length = 202
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 76/191 (39%), Positives = 120/191 (62%), Gaps = 1/191 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ G G + D+++ L +ER+IF+ ++++ +N ++A +L+L+S + K
Sbjct: 9 LGMIPMVIEQSGRGERSY-DIYSRLLKERIIFLVGEVNDQTANLVVAQLLFLESENPDKD 67
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+ YIN PGG V+ +AIYDTMQ +K V T C+GFA + FLLA GEKG R ++P S+
Sbjct: 68 ISFYINSPGGSVSAGMAIYDTMQFIKPDVSTMCIGFAASMGAFLLAAGEKGKRFSLPNSK 127
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
I + G ARGQA DI A ++LR +D + + L+ +TGQP EK+ D R + E
Sbjct: 128 IMIHQVLGGARGQATDIEIHARDILRTKDQMNRILAERTGQPLEKVKSDTERDYFLTADE 187
Query: 250 ALEYGLIDRII 260
A +YGL+D++I
Sbjct: 188 AKDYGLVDQVI 198
>gi|407789641|ref|ZP_11136741.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
gi|407206301|gb|EKE76259.1| ATP-dependent Clp protease proteolytic subunit [Gallaecimonas
xiamenensis 3-C-1]
Length = 203
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 76/190 (40%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ +++ +N I+A +L+L++ + K +
Sbjct: 14 VPMVIEQTARGERSF---DIYSRLLKERVIFLTGQVEDHMANLIVAQLLFLEAENPEKDI 70
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K+ V T C+G A + FLLAGG KG R +P +R+
Sbjct: 71 HLYINSPGGSVTAGMAIYDTMQFIKADVSTLCIGQAASMGAFLLAGGAKGKRHCLPNARV 130
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L ++D + + L+ TGQ E I +D R + +++A
Sbjct: 131 MIHQPLGGFQGQASDIEIHAREILFIKDRLNRLLADHTGQSLETIAQDTDRDRFMTAEQA 190
Query: 251 LEYGLIDRII 260
+EYGL+D ++
Sbjct: 191 MEYGLVDSVL 200
>gi|443320140|ref|ZP_21049261.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
gi|442790136|gb|ELR99748.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Gloeocapsa
sp. PCC 73106]
Length = 233
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 83/216 (38%), Positives = 128/216 (59%), Gaps = 9/216 (4%)
Query: 48 HKSLYSGIRNDKPIRGRIAMMPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNID 107
+K ++ND I+ + P VL ++ G G + D+++ L RER+IFIG ID
Sbjct: 15 YKPEIQSVKNDPTIKNIV-------PMVLEQS-GLGERAF-DIYSRLLRERIIFIGTPID 65
Query: 108 EEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAY 167
+ +N + A +L+L++ D K + +YIN PGG V +AIYDTM+ + V T C G A
Sbjct: 66 DTLANSVTAQLLFLEAEDSEKDIQIYINSPGGSVYAGMAIYDTMRQVAPDVATICYGIAA 125
Query: 168 HLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRK 227
+ FLL+GG G R A+P +R+ + P G A+GQA DI+ +A E+L ++ + + L+
Sbjct: 126 SMGAFLLSGGTNGKRMALPNARMMIHQPLGGAQGQASDIQIQAREILYIKKRLNQLLAEH 185
Query: 228 TGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPP 263
TGQ EK++ D R S++A EYGLID++I P
Sbjct: 186 TGQTLEKVSMDTERDFYMSSEKAKEYGLIDQVIHKP 221
>gi|334134662|ref|ZP_08508166.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
gi|333607817|gb|EGL19127.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP
[Paenibacillus sp. HGF7]
Length = 195
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 119/190 (62%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R++F+G ID++ +N I+A +L+L++ D K +
Sbjct: 5 VPYVVEQTSRGERSY---DIYSRLLKDRIVFLGAAIDDQVANSIIAQLLFLEAEDPQKEI 61
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG + AIYD MQ +K PV T C GFA A LL GEKG R A+P S I
Sbjct: 62 SLYINSPGGSTSAGFAIYDAMQLVKPPVHTICTGFAASFAAILLLAGEKGKRFALPNSEI 121
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A +L +R+ + + S +TGQP +K+ +D+ R ++EA
Sbjct: 122 MIHQPHGGVQGQASDIAISAKRILGIRERLNRITSERTGQPVDKVDRDMDRDYFMSAEEA 181
Query: 251 LEYGLIDRII 260
EYG+ID+++
Sbjct: 182 REYGIIDQVV 191
>gi|386815716|ref|ZP_10102934.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiothrix
nivea DSM 5205]
gi|386420292|gb|EIJ34127.1| ATP-dependent Clp protease proteolytic subunit ClpP [Thiothrix
nivea DSM 5205]
Length = 204
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/192 (41%), Positives = 121/192 (63%), Gaps = 4/192 (2%)
Query: 70 IGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSK 128
+G P V+ ++ GE ++ D+++ L RERVIF +++ +N I+A +L+L+S + K
Sbjct: 12 VGVPMVIEQSARGERAF---DIYSRLLRERVIFCVGEVEDYMANLIVAQLLFLESENPEK 68
Query: 129 RVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLS 188
+++YIN PGG +T +AIYDTMQ +K V T C+G A + LLAGG KG R A+P S
Sbjct: 69 DIHLYINSPGGVITSGMAIYDTMQFIKPDVSTLCIGQAASMGAVLLAGGAKGKRFALPHS 128
Query: 189 RIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQ 248
R+ + P G RGQA DI A E+L++R+ + + L+ TGQP E+I +D R +
Sbjct: 129 RVMIHQPLGGFRGQASDIEIHAREILKMREELNRVLASHTGQPLERIEQDTDRDNFMDAP 188
Query: 249 EALEYGLIDRII 260
A EYGLID ++
Sbjct: 189 TACEYGLIDEVL 200
>gi|206890175|ref|YP_002248104.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
gi|226706554|sp|B5YI38.1|CLPP_THEYD RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|206742113|gb|ACI21170.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Thermodesulfovibrio yellowstonii DSM 11347]
Length = 195
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 112/172 (65%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L ++R+IFIG I++ +N ++A +L+L + D K +++YIN PGG V+ LAIY
Sbjct: 19 DIYSRLLKDRIIFIGTEINDHVANVVIAQLLFLQTEDPEKDIHIYINSPGGMVSSGLAIY 78
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ +K + T+C+G A +A LLA G KG R A+P SR+ + P G GQA D+
Sbjct: 79 DTMQYVKPDIATYCIGQASSMACVLLAAGTKGKRFALPHSRVMIHQPIGGFYGQATDVEI 138
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
A E+L+++D + L++ TGQP EKI KD R ++EA YG++D +I
Sbjct: 139 HAKEILKMKDLLNNILAKHTGQPIEKIQKDTERDFFMSAEEAKLYGIVDEVI 190
>gi|343496564|ref|ZP_08734660.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
gi|342821177|gb|EGU55971.1| ATP-dependent Clp protease proteolytic subunit [Vibrio
nigripulchritudo ATCC 27043]
Length = 208
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 79/199 (39%), Positives = 125/199 (62%), Gaps = 7/199 (3%)
Query: 66 AMMPIG---TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
AM PI P V+ +T GE S+ D+++ L +ER+IF+ ++++ +N ++A +L+L
Sbjct: 8 AMSPIIDALVPMVVEQTSRGERSY---DIYSRLLKERIIFLTGQVEDQMANLVVAQLLFL 64
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
+S + K +++YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG +G
Sbjct: 65 ESENPDKDIFLYINSPGGSVTAGMSIYDTMQYIKPNVSTVCMGQACSMGAFLLAGGAEGK 124
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSR 241
R +P SR+ + P G +GQA DI+ A E+L ++ + K L+ TGQP E I +D R
Sbjct: 125 RHVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDR 184
Query: 242 IKRFGSQEALEYGLIDRII 260
+ +A+EYGL+D ++
Sbjct: 185 DNFMSADQAVEYGLVDSVL 203
>gi|340753245|ref|ZP_08690034.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|422314997|ref|ZP_16396444.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
gi|229422844|gb|EEO37891.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium sp.
2_1_31]
gi|404593038|gb|EKA94701.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
periodonticum D10]
Length = 193
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 80/180 (44%), Positives = 114/180 (63%), Gaps = 2/180 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL+S D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDENVANSIIAQLLYLESEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLL+ G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLSSGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
QA DI A+ELL+++D + + L+R TG+ E+I D R S+EA+ YGLID + +
Sbjct: 133 QATDISIHANELLKIKDRLAELLARNTGKTKEQILNDTERDNYLSSEEAVRYGLIDSVFK 192
>gi|208779709|ref|ZP_03247053.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTG]
gi|208744164|gb|EDZ90464.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Francisella
novicida FTG]
Length = 201
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 114/190 (60%), Gaps = 2/190 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G + D+++ L +ER++F+ +++ +N ++A +L+L+S D +K +Y
Sbjct: 7 VPTVIEKTAG--GERAFDIYSRLLKERIVFLNGEVNDHSANLVIAQLLFLESEDPNKDIY 64
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
YIN PGG VT + +YDTMQ +K V T C+G A + LLAGG KG R ++P S+I
Sbjct: 65 FYINSPGGMVTAGMGVYDTMQFIKPDVSTICIGLAASMGSLLLAGGAKGKRYSLPSSQIM 124
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G RGQA DI A +LR++D + K L+ TGQ E I KD R + EA
Sbjct: 125 IHQPLGGFRGQASDIEIHAKNILRIKDRLNKVLAHHTGQDLETIVKDTDRDNFMMADEAK 184
Query: 252 EYGLIDRIIR 261
YGLID +I
Sbjct: 185 AYGLIDHVIE 194
>gi|407713410|ref|YP_006833975.1| ATP-dependent Clp protease, protease subunit [Burkholderia
phenoliruptrix BR3459a]
gi|407235594|gb|AFT85793.1| ATP-dependent Clp protease, protease subunit [Burkholderia
phenoliruptrix BR3459a]
Length = 211
Score = 156 bits (394), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A ML+L+S + K
Sbjct: 18 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKD 76
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+Y YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 77 IYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSR 136
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
+ + P G ARGQA DI +A E+L +++ + L+ TGQP E+I +D R +
Sbjct: 137 VMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDD 196
Query: 250 ALEYGLIDRI 259
A YGL+D++
Sbjct: 197 AQAYGLVDQV 206
>gi|334118528|ref|ZP_08492617.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
gi|333459535|gb|EGK88148.1| ATP-dependent Clp protease proteolytic subunit [Microcoleus
vaginatus FGP-2]
Length = 229
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/199 (41%), Positives = 121/199 (60%), Gaps = 6/199 (3%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P VL ++ G G + D+++ L RER++F+G + +E ++ I+A +LYLD+ D K V
Sbjct: 27 VPMVLEQS-GMGERAF-DIYSRLLRERIVFLGTPVTDEVADSIVAQLLYLDAEDPEKDVQ 84
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
MYIN PGG VT +AIYDTMQ ++ V T C G A + FLL G G R ++P SRI
Sbjct: 85 MYINSPGGSVTAGMAIYDTMQQIRPDVVTICYGLAASMGAFLLTAGAHGKRMSLPSSRIM 144
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA DI +A E+L + + + L+ TGQP +K+ D R ++EA
Sbjct: 145 IHQPLGGAQGQAVDIEIQAKEILYHKRKLNQLLAHHTGQPLDKLEADTERDFFMSAEEAK 204
Query: 252 EYGLIDRIIRPPRIKEDMP 270
YGL+DR+I KE++P
Sbjct: 205 NYGLVDRVIA----KENLP 219
>gi|331090536|ref|ZP_08339389.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
gi|330405879|gb|EGG85407.1| ATP-dependent Clp protease proteolytic subunit [Lachnospiraceae
bacterium 2_1_46FAA]
Length = 193
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 77/190 (40%), Positives = 124/190 (65%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ + + ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDVSASIIVAQLLHLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
+YIN PGG V+ LAIYDTMQ +K V T C+G A + FLLAGG KG R A+P + I
Sbjct: 61 QLYINSPGGSVSAGLAIYDTMQYIKCDVSTTCIGMAASMGAFLLAGGAKGKRFALPNAEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA +I+ A+ +L+ R + + L+ +TG+ FE+I+ D R ++EA
Sbjct: 121 MIHQPLGGAQGQATEIQIAAEHILKTRQKLNEILAERTGKSFEQISADTERDNFMSAKEA 180
Query: 251 LEYGLIDRII 260
EYGLID+++
Sbjct: 181 EEYGLIDKVV 190
>gi|239623656|ref|ZP_04666687.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47_FAA]
gi|239521687|gb|EEQ61553.1| ATP-dependent Clp protease [Clostridiales bacterium 1_7_47FAA]
Length = 193
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 121/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ER+IF+G+ +++ ++ ++A +L+L+S D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKERIIFLGEEVNDVSASLVVAQLLFLESEDPGKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG V+ AIYDTM +K V T C+G A + FLLAGG KG R A+P S I
Sbjct: 61 HLYINSPGGSVSAGFAIYDTMNYIKCDVSTICIGMAASMGAFLLAGGAKGKRFALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA +I+ A+ +L+ R + L+ TG+P E I +D R ++EA
Sbjct: 121 MIHQPSGGAKGQATEIKIVAENILKTRKKLNDILAANTGRPIEVIERDTERDNYMSAEEA 180
Query: 251 LEYGLIDRII 260
EYGLID II
Sbjct: 181 KEYGLIDEII 190
>gi|302390303|ref|YP_003826124.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
gi|302200931|gb|ADL08501.1| ATP-dependent Clp protease proteolytic subunit ClpP
[Thermosediminibacter oceani DSM 16646]
Length = 200
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/190 (42%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R++FIG ID+ ++ ++A +L+L+S D K +
Sbjct: 4 VPIVIEQTNRGERAY---DIYSRLLKDRIVFIGTPIDDSIASLVIAQLLFLESEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTMQ +K V T C+G A + LLAGG G R A+P SRI
Sbjct: 61 YLYINSPGGSVTAGLAIYDTMQYIKPDVSTICIGMAASMGAVLLAGGAPGKRLALPNSRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +G+A DI A E+LR+R+ + + L + T QP E+I +D R + EA
Sbjct: 121 MIHQPWGGVQGRALDIETHAKEILRLREVLNEILVKHTKQPLERIERDTERDYFMSAVEA 180
Query: 251 LEYGLIDRII 260
+YGLID +I
Sbjct: 181 KQYGLIDEVI 190
>gi|336124548|ref|YP_004566596.1| ClpP [Vibrio anguillarum 775]
gi|365538382|ref|ZP_09363557.1| ATP-dependent Clp protease proteolytic subunit [Vibrio ordalii ATCC
33509]
gi|335342271|gb|AEH33554.1| ClpP [Vibrio anguillarum 775]
Length = 208
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/200 (40%), Positives = 124/200 (62%), Gaps = 7/200 (3%)
Query: 66 AMMPIG---TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYL 121
AM PI P V+ +T GE S+ D+++ L +ERVIF+ +++ +N ++A +L+L
Sbjct: 8 AMSPIFDALVPMVVEQTSRGERSY---DIYSRLLKERVIFLTGQVEDHMANLVVAQLLFL 64
Query: 122 DSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGN 181
+S + K +++YIN PGG VT ++IYDTMQ +K V T C+G A + FLLAGG G
Sbjct: 65 ESENPDKDIFLYINSPGGSVTAGMSIYDTMQFIKPNVSTVCMGQACSMGAFLLAGGAPGK 124
Query: 182 RSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSR 241
R +P SR+ + P G +GQA DI+ A E+L ++ + K L+ TGQP E I +D R
Sbjct: 125 RYVLPNSRVMIHQPLGGFQGQASDIQIHAQEILTIKQKLNKLLAEHTGQPLEVIERDTDR 184
Query: 242 IKRFGSQEALEYGLIDRIIR 261
+ +A+EYGL+D ++R
Sbjct: 185 DNFMSADQAVEYGLVDAVLR 204
>gi|310778378|ref|YP_003966711.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ilyobacter
polytropus DSM 2926]
gi|309747701|gb|ADO82363.1| ATP-dependent Clp protease proteolytic subunit ClpP [Ilyobacter
polytropus DSM 2926]
Length = 199
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/195 (41%), Positives = 120/195 (61%), Gaps = 2/195 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L R+R+IF+G ID+ +N I+A +L+L++ D K + M
Sbjct: 4 PTVIENT-GRGERAY-DIYSRLLRDRIIFLGTEIDDRVANSIVAQLLFLEAEDAEKDIIM 61
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG +T +AIYDTM +K V T C+G A + LL G G R ++ SRI +
Sbjct: 62 YINSPGGVITGGMAIYDTMNYIKPDVQTVCIGQAASMGALLLTAGTPGKRYSLENSRIMI 121
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G ARGQA DI +A E+L++++ + +S+ TGQPF+K+ +D R K EA E
Sbjct: 122 HQPLGGARGQATDIAIQAKEILKMKELTSQIISKTTGQPFDKVMEDTERDKYMNPYEAKE 181
Query: 253 YGLIDRIIRPPRIKE 267
YGL+D + + R +E
Sbjct: 182 YGLVDHVFKGTRGEE 196
>gi|159465361|ref|XP_001690891.1| active subunit of the chloroplast ClpP complex [Chlamydomonas
reinhardtii]
gi|158279577|gb|EDP05337.1| active subunit of the chloroplast ClpP complex [Chlamydomonas
reinhardtii]
Length = 256
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 114/172 (66%)
Query: 94 LYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQS 153
L+++R++ +G +D++ +N ++A +LYLDSVD+ + + MY+N PGG VT +A++DTM+
Sbjct: 75 LFQQRIVRLGGAVDDDMANLLVAQLLYLDSVDNKRDITMYVNSPGGSVTAGMAVFDTMRH 134
Query: 154 LKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADEL 213
++ V T C+G A + F+LA G+ G R ++P SRI + P G A+GQA DI +A+E+
Sbjct: 135 IRPDVSTCCIGLAASMGAFILASGQAGKRYSLPNSRIMIHQPLGGAQGQATDIEIQANEI 194
Query: 214 LRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIRPPRI 265
L + + L++ TGQ E ITKD R QEA+EYGL+D II P++
Sbjct: 195 LHHKLTLNGYLAQFTGQSMETITKDTDRDFFMSPQEAIEYGLVDAIISKPQM 246
>gi|296134054|ref|YP_003641301.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
gi|296032632|gb|ADG83400.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thermincola
potens JR]
Length = 194
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/190 (42%), Positives = 122/190 (64%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L ++R+IFIG ID+ +N ++A ML+L++ D K +
Sbjct: 4 VPIVVEQTNRGERAY---DIYSRLLKDRIIFIGGPIDDMVANLVIAQMLFLEAEDPDKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K V T C+G A + FLLA G KG R A+P +RI
Sbjct: 61 HIYINSPGGVVTAGMAIYDTMQYIKPDVSTICMGQAASMGSFLLAAGTKGKRYALPYTRI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+LR++ + + L++ TGQP E I +D R ++EA
Sbjct: 121 MIHQPLGGVQGQATDIDIHAKEILRMKSVLNELLAKHTGQPVEVIARDTERDFFMSAEEA 180
Query: 251 LEYGLIDRII 260
+YG++D +I
Sbjct: 181 RKYGIVDEVI 190
>gi|295137023|ref|YP_003587570.1| ATP-dependent Clp protease proteolytic subunit [Pisum sativum]
gi|293338595|gb|ADE43568.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Pisum
sativum]
Length = 199
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/193 (39%), Positives = 118/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV + PG+ W+DL++ L+ +R++F+GQ ++ E SNQ+ M+YL +
Sbjct: 1 MPVGVPKVGFEVPGDDEASWIDLYHQLFFDRLLFLGQEVESEISNQVCGMMIYLSLENKY 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++I PGG+V LAI+D MQ +++ V T CVG A +A +L GGE R A P
Sbjct: 61 KNLYLFIKSPGGEVLSGLAIFDIMQFVEAEVQTVCVGLAASMASLILLGGEITKRLAFPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + PA +A GQ+ + EA ELL +R + ++T +P +I+KDL R
Sbjct: 121 ARVMIHQPASSAYDGQSGECMLEAHELLSIRQTMTNIYCQRTRKPSWQISKDLDRDFFMS 180
Query: 247 SQEALEYGLIDRI 259
++EA YG+ID I
Sbjct: 181 AEEAQAYGIIDTI 193
>gi|17228733|ref|NP_485281.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
gi|21759071|sp|Q8YXH5.1|CLPP1_ANASP RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|17130585|dbj|BAB73195.1| ATP-dependent Clp protease proteolytic subunit [Nostoc sp. PCC
7120]
Length = 204
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 80/193 (41%), Positives = 117/193 (60%), Gaps = 9/193 (4%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
T ++ G G + D+++ L RER++F+GQ +D +N I+A +L+LD+ D K +Y
Sbjct: 2 TIPIVIEQSGRGERAF-DIYSRLLRERIVFLGQQVDSNLANLIVAQLLFLDAEDPEKDIY 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT + I+DTM+ ++ V T C G A + FLL+ G KG R ++P SRI
Sbjct: 61 LYINSPGGSVTAGMGIFDTMKHIRPDVCTICTGLAASMGAFLLSAGAKGKRMSLPHSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELL----RVRDYIFKELSRKTGQPFEKITKDLSRIKRFGS 247
+ P G A+GQA DI +A E+L R+ DY L+ TGQP E+I +D R
Sbjct: 121 IHQPLGGAQGQATDIEIQAREILYHKRRLNDY----LAEHTGQPIERIAEDTERDFFMSP 176
Query: 248 QEALEYGLIDRII 260
EA +YGLID++I
Sbjct: 177 DEAKDYGLIDQVI 189
>gi|148263972|ref|YP_001230678.1| ATP-dependent Clp protease proteolytic subunit [Geobacter
uraniireducens Rf4]
gi|189082459|sp|A5GFA0.1|CLPP_GEOUR RecName: Full=ATP-dependent Clp protease proteolytic subunit;
AltName: Full=Endopeptidase Clp
gi|146397472|gb|ABQ26105.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geobacter
uraniireducens Rf4]
Length = 199
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 121/189 (64%), Gaps = 2/189 (1%)
Query: 72 TPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T G G + D+++ L ++R++F+G ID+ SN ++A +L+L++ D K ++
Sbjct: 3 VPIVVEQT-GRGERSY-DIYSRLLKDRIVFLGGAIDDAISNLVIAQLLFLEAEDPDKDIH 60
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT +AIYDTM+ +K+PV T CVG A + FLL+GGEKG R ++ SRI
Sbjct: 61 LYINSPGGVVTAGMAIYDTMRYIKAPVSTICVGQAASMGAFLLSGGEKGKRFSLTNSRIM 120
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI A E+LR++ + + ++ TGQP EK+ D R ++A
Sbjct: 121 IHQPLGGFQGQATDIHIHAQEILRMKKKLNELMAEHTGQPVEKLEADTERDYFMSGEDAK 180
Query: 252 EYGLIDRII 260
YG+ID II
Sbjct: 181 NYGIIDSII 189
>gi|403745050|ref|ZP_10954078.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
gi|403121705|gb|EJY55982.1| ATP-dependent Clp protease, proteolytic subunit ClpP
[Alicyclobacillus hesperidum URH17-3-68]
Length = 193
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/192 (41%), Positives = 119/192 (61%), Gaps = 4/192 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE S+ D+++ L ++R++ +G ID+ +N I+A +L+L + D K +
Sbjct: 5 PYVIEQTSRGERSY---DIYSRLLKDRIVLLGTAIDDNVANAIVAQLLFLAADDPEKDIQ 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDT+Q ++ V T CVG A + FLLA GEKG R A+P + I
Sbjct: 62 LYINSPGGSVTAGLAIYDTIQHIRPAVSTMCVGMAASMGAFLLAAGEKGKRYALPNAEIM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G +GQA DI+ A+ +L+ +D + + L+ +TGQP E I +D R + EA
Sbjct: 122 IHQPLGGVQGQASDIQIHAEWMLKTKDKLNRLLAERTGQPLEVIERDTDRDNFMSADEAK 181
Query: 252 EYGLIDRIIRPP 263
YGLID ++ P
Sbjct: 182 AYGLIDEVLGTP 193
>gi|170692395|ref|ZP_02883558.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307729638|ref|YP_003906862.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323526047|ref|YP_004228200.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
gi|170142825|gb|EDT10990.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
graminis C4D1M]
gi|307584173|gb|ADN57571.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1003]
gi|323383049|gb|ADX55140.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Burkholderia
sp. CCGE1001]
Length = 217
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 118/190 (62%), Gaps = 1/190 (0%)
Query: 70 IGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKR 129
+G ++ T G G + D+++ L +ER++F+ ++++ +N ++A ML+L+S + K
Sbjct: 24 LGLVPIVVETSGRGERSY-DIYSRLLKERIVFLVGEVNDQTANLVVAQMLFLESENPDKD 82
Query: 130 VYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSR 189
+Y YIN PGG V+ +AIYDTMQ +K V T C+G A + FLLA G KG R A+P SR
Sbjct: 83 IYFYINSPGGSVSAGMAIYDTMQFIKPDVSTLCMGLAASMGAFLLAAGAKGKRFALPNSR 142
Query: 190 IALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQE 249
+ + P G ARGQA DI +A E+L +++ + L+ TGQP E+I +D R +
Sbjct: 143 VMIHQPLGGARGQASDIEIQAREILYLKERLNHLLAHHTGQPVERIARDTDRDNFMSGDD 202
Query: 250 ALEYGLIDRI 259
A YGL+D++
Sbjct: 203 AQAYGLVDQV 212
>gi|375088858|ref|ZP_09735196.1| ATP-dependent Clp protease proteolytic subunit [Dolosigranulum
pigrum ATCC 51524]
gi|374561823|gb|EHR33162.1| ATP-dependent Clp protease proteolytic subunit [Dolosigranulum
pigrum ATCC 51524]
Length = 197
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ ++P GE ++ D+++ L ++R+I IG ID +N +++ +L+LD+ D +K +
Sbjct: 4 VPTVIEQSPRGERAY---DIYSRLLKDRIIMIGDAIDNNTANSVVSQLLFLDAQDSTKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
Y+YIN PGG VT LAIYDTM +K+ V T +G + + L + G KG R A+P + +
Sbjct: 61 YLYINSPGGSVTAGLAIYDTMNFIKADVQTIVLGLSASMGAILSSSGAKGKRFALPNAEL 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA +I A +LR R+ + K L+ KTGQP E++ KD R ++EA
Sbjct: 121 MIHQPLGGAQGQATEIEIAAKNILRTRERLNKILADKTGQPLERVQKDTDRDNFMTAEEA 180
Query: 251 LEYGLIDRII 260
LEYGLID I+
Sbjct: 181 LEYGLIDEIM 190
>gi|319650519|ref|ZP_08004659.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
2_A_57_CT2]
gi|317397700|gb|EFV78398.1| ATP-dependent Clp protease proteolytic subunit [Bacillus sp.
2_A_57_CT2]
Length = 201
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/189 (41%), Positives = 120/189 (63%), Gaps = 4/189 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +T GE ++ D+++ L ++R+I +G ID+ +N I+A +L+L++ + K +
Sbjct: 5 PTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANSIVAQLLFLEAENPEKDIS 61
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG +T +AIYDTMQ +K V T C+G A + FLLA GEKG R A+P S +
Sbjct: 62 IYINSPGGSITAGMAIYDTMQFIKPKVQTICIGMAASMGAFLLAAGEKGKRFALPNSEVM 121
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
+ P G A+GQA +I A +L +R+ + LS +TGQP E I +D R ++ AL
Sbjct: 122 IHQPLGGAQGQATEIEIAAKRILFLREKLNTILSERTGQPLEVIARDTDRDNFMTAERAL 181
Query: 252 EYGLIDRII 260
EYGL+D+II
Sbjct: 182 EYGLVDQII 190
>gi|307151649|ref|YP_003887033.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
gi|306981877|gb|ADN13758.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Cyanothece
sp. PCC 7822]
Length = 228
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/172 (43%), Positives = 111/172 (64%)
Query: 89 DLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIY 148
D+++ L RER++F+G ID+ ++ I+A +LYLD+ D K + +YIN PGG V LAIY
Sbjct: 42 DIYSRLLRERIVFLGTAIDDNVADSIVAQLLYLDAEDPEKDIQLYINSPGGSVYAGLAIY 101
Query: 149 DTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRN 208
DTMQ ++ V T C G A + FLL+GG KG R A+P +RI + P G A+GQA +I
Sbjct: 102 DTMQQIRPDVVTICFGLAASMGAFLLSGGTKGKRMALPSARIMIHQPIGGAQGQAVEIDI 161
Query: 209 EADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRII 260
+A E+L ++ + L+ TGQP+E+I +D R +A +YGLID++I
Sbjct: 162 QAKEILYIKQRLNSLLAEHTGQPYERIAEDTERDFYMSVHDAKDYGLIDQVI 213
>gi|34762747|ref|ZP_00143736.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256846930|ref|ZP_05552384.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294784271|ref|ZP_06749566.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|421144657|ref|ZP_15604566.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
gi|27887597|gb|EAA24677.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. vincentii ATCC 49256]
gi|256717728|gb|EEU31287.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_36A2]
gi|294488137|gb|EFG35488.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Fusobacterium
sp. 3_1_27]
gi|395488964|gb|EJG09810.1| ATP-dependent Clp protease proteolytic subunit [Fusobacterium
nucleatum subsp. fusiforme ATCC 51190]
Length = 193
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 79/180 (43%), Positives = 115/180 (63%), Gaps = 2/180 (1%)
Query: 84 SWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTP 143
S + D+++ L ++R+IF+G IDE +N I+A +LYL++ D K + MYIN PGG VT
Sbjct: 13 SERAYDIYSRLLKDRIIFVGTAIDETVANSIIAQLLYLEAEDPEKDIIMYINSPGGSVTD 72
Query: 144 TLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDSP--AGAARG 201
+AIYDTM +K V T CVG A + FLLA G KG R A+ SRI + P +G +G
Sbjct: 73 GMAIYDTMNYIKPDVQTVCVGQAASMGAFLLAAGAKGKRFALENSRIMIHQPLISGGLKG 132
Query: 202 QADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYGLIDRIIR 261
QA DI A+ELL+++D + + L++ TG+ E+I +D R S+EA+ YGLID + +
Sbjct: 133 QATDISIHANELLKIKDRLAELLAKNTGKTKEQILRDTERDNYLSSEEAVNYGLIDSVFK 192
>gi|390949050|ref|YP_006412809.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiocystis
violascens DSM 198]
gi|390425619|gb|AFL72684.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Thiocystis
violascens DSM 198]
Length = 214
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 120/190 (63%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ +++ SN ++A +L+L+S + K +
Sbjct: 18 VPIVVEQTARGERSF---DIYSRLLKERVIFLVGQVEDHMSNLVVAQLLFLESENPDKDI 74
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT LAIYDTM+ ++ V T C+G A + LLAGG KG R +P SR+
Sbjct: 75 HLYINSPGGSVTAGLAIYDTMRFVRPDVSTMCIGQAASMGALLLAGGAKGKRYCLPHSRM 134
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G +GQA DI A E+L +RD + + LS TGQP EKI +D R + + A
Sbjct: 135 MIHQPLGGFQGQATDIDIHAREILYIRDKLNQILSEHTGQPIEKIAEDTERDRFMSGEVA 194
Query: 251 LEYGLIDRII 260
EYGLID++I
Sbjct: 195 QEYGLIDKVI 204
>gi|16332037|ref|NP_442765.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|383323780|ref|YP_005384634.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|383326949|ref|YP_005387803.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|383492833|ref|YP_005410510.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|384438101|ref|YP_005652826.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|451816189|ref|YP_007452641.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
gi|1705930|sp|P54416.1|CLPP1_SYNY3 RecName: Full=ATP-dependent Clp protease proteolytic subunit 1;
AltName: Full=Endopeptidase Clp 1
gi|1001349|dbj|BAA10836.1| ATP-dependent protease; ClpP [Synechocystis sp. PCC 6803]
gi|339275134|dbj|BAK51621.1| ATP-dependent protease [Synechocystis sp. PCC 6803]
gi|359273100|dbj|BAL30619.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. GT-I]
gi|359276270|dbj|BAL33788.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-N]
gi|359279440|dbj|BAL36957.1| ATP-dependent protease [Synechocystis sp. PCC 6803 substr. PCC-P]
gi|407960326|dbj|BAM53566.1| ATP-dependent protease ClpP [Bacillus subtilis BEST7613]
gi|451782158|gb|AGF53127.1| ATP-dependent protease ClpP [Synechocystis sp. PCC 6803]
Length = 198
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 120/188 (63%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ T G G + D+++ L RER++F+GQ + +E +N ++A +L+L++ D K +Y+
Sbjct: 3 PTVI-ETSGRGDRAF-DIYSRLLRERIVFLGQEVRDENANLVVAQLLFLEAEDPEKDIYL 60
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG V+ L I+DTM ++ V T C+G A + FLL+ G KG R ++P SRI +
Sbjct: 61 YINSPGGSVSAGLGIFDTMNQIRPDVCTICIGLAASMGAFLLSAGAKGKRMSLPNSRIMI 120
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P G A+GQA DI +A E+L ++ + + L+ TG+ E+IT D R ++E+ E
Sbjct: 121 HQPLGGAQGQATDIEIQAKEILYLKALLNQHLANHTGKSLEEITADTERDFFMSAEESKE 180
Query: 253 YGLIDRII 260
YGLID++I
Sbjct: 181 YGLIDQVI 188
>gi|206896158|ref|YP_002247153.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
gi|206738775|gb|ACI17853.1| Clp protease [Coprothermobacter proteolyticus DSM 5265]
Length = 199
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 83/197 (42%), Positives = 123/197 (62%), Gaps = 4/197 (2%)
Query: 73 PKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVY 131
P V+ +TP GE + D+++ L R+R++FI I+ E + ++A +L+L++ D + +Y
Sbjct: 6 PYVIEQTPRGERGY---DIYSRLLRDRIVFINGEIEPEMAGVVIAQLLFLEAEDPKRDIY 62
Query: 132 MYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIA 191
+YIN PGG VT LAIYDTMQ ++ V T C+G A +A LLA G KG R A+P SRI
Sbjct: 63 VYINSPGGIVTDGLAIYDTMQYIEPDVVTMCIGQAASMAAILLAAGTKGKRFALPNSRIL 122
Query: 192 LDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEAL 251
L P G +GQ D+ +A EL+R++ I + LS TGQP ++I +D R EA+
Sbjct: 123 LHQPMGGVQGQVTDVEIQAKELVRIKQRINEILSVHTGQPIDRILQDTDRDFILTPDEAV 182
Query: 252 EYGLIDRIIRPPRIKED 268
+YG+ID++I KED
Sbjct: 183 QYGVIDQVITKRIRKED 199
>gi|153854553|ref|ZP_01995823.1| hypothetical protein DORLON_01818 [Dorea longicatena DSM 13814]
gi|149752862|gb|EDM62793.1| ATP-dependent Clp endopeptidase, proteolytic subunit ClpP [Dorea
longicatena DSM 13814]
Length = 193
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/191 (40%), Positives = 120/191 (62%), Gaps = 4/191 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L ++R+IF+G+ + + ++ I+A +L+L++ D K +
Sbjct: 4 VPYVIEQTSRGERSY---DIYSRLLKDRIIFLGEEVTDVSASVIVAQLLFLEAEDPEKDI 60
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
++YIN PGG VT +AIYDTMQ +K + T C+G A + FLL GG KG R A+P S I
Sbjct: 61 HLYINSPGGSVTAGMAIYDTMQYIKCDIETICIGMAASMGSFLLTGGTKGKRLALPNSEI 120
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P G A+GQA +I+ AD +L+ R + + L+ TGQP E I D R ++EA
Sbjct: 121 MIHQPLGGAQGQATEIQIAADHILKTRQKLNQILAENTGQPLEVINADTERDNFMTAEEA 180
Query: 251 LEYGLIDRIIR 261
YGLID +I+
Sbjct: 181 KAYGLIDEVIK 191
>gi|56269518|gb|AAH87510.1| LOC496087 protein, partial [Xenopus laevis]
Length = 243
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 131/225 (58%), Gaps = 4/225 (1%)
Query: 49 KSLYSGIRNDKPIRGRIAMMPIGTP--KVLYRTPGEGSWQWVDLWNALYRERVIFIGQNI 106
+ L GIR +R PI +P ++ G G + D+++ L RER+I + I
Sbjct: 5 RPLLKGIRALTQLRNVHCSPPILSPLIPIVVEQTGRGERAY-DIYSRLLRERIICVMGPI 63
Query: 107 DEEFSNQILATMLYLDSVDDSKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFA 166
D+ S+ ++A +L+L S + K ++MYIN PGG VT LAIYDTMQ + +P+ T CVG A
Sbjct: 64 DDSLSSVVVAQLLFLQSESNKKPIHMYINSPGGSVTAGLAIYDTMQYILNPICTWCVGQA 123
Query: 167 YHLAGFLLAGGEKGNRSAMPLSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSR 226
+ LLA G G R ++P SRI + P+G ARGQA DI +A+E+L+++ I + ++
Sbjct: 124 ASMGSLLLAAGSSGMRHSLPNSRIMIHQPSGGARGQATDIAIQAEEILKLKKQINEIYAK 183
Query: 227 KTGQPFEKITKDLSRIKRFGSQEALEYGLIDRI-IRPPRIKEDMP 270
T QP I + R + EA E+G++D++ + PP+ ED P
Sbjct: 184 HTRQPLSVIESVMERDRYMSPTEAQEFGILDKVLVHPPQDGEDEP 228
>gi|389795694|ref|ZP_10198808.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
fulvus Jip2]
gi|388430346|gb|EIL87520.1| ATP-dependent Clp protease, proteolytic subunit ClpP [Rhodanobacter
fulvus Jip2]
Length = 209
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 82/190 (43%), Positives = 119/190 (62%), Gaps = 4/190 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE S+ D+++ L +ERVIF+ ++++ +N ++A ML+L+S + K +
Sbjct: 12 VPMVVEQTARGERSY---DIYSRLLKERVIFLVGEVNDQVANLLVAQMLFLESENPDKDI 68
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG VT LAIYDTMQ +K V T C+G A + FLL G KG R A+P SR+
Sbjct: 69 QFYINSPGGAVTAGLAIYDTMQFIKPSVSTMCIGQACSMGSFLLMAGAKGKRYALPNSRV 128
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI +A E+L VR+ + K + TGQP KI D+ R + + EA
Sbjct: 129 MIHQPSGGAQGQATDIEIQAREILYVRERLNKLYAEHTGQPLAKIELDMERDRFMDANEA 188
Query: 251 LEYGLIDRII 260
YGLID ++
Sbjct: 189 KTYGLIDEVL 198
>gi|352950957|ref|YP_004891261.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Larix
decidua]
gi|347977612|dbj|BAK86568.1| ATP-dependent Clp protease proteolytic subunit (chloroplast) [Larix
decidua]
Length = 190
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 109/175 (62%), Gaps = 1/175 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV +R PG+ WVDL+N LYRER++F+ Q+I+ E +NQ++ M+YL + D +
Sbjct: 1 MPVGVPKVPFRAPGDEDANWVDLYNRLYRERLLFLAQDINHEIANQLMGLMVYLSAEDAN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K ++ ++N PGG V P + I+D MQ + V T C+G A + F+L GGE R A+P
Sbjct: 61 KDMFSFLNCPGGSVIPGVGIFDVMQIIVPDVHTICMGVAASMGSFILIGGEITKRIALPH 120
Query: 188 SRIALDSPAGAAR-GQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSR 241
+R+ + PA G A D NE+ + +RDYI K +TG P E I +DL+R
Sbjct: 121 ARVMIHQPASTYYDGPAADFHNESKHVTMLRDYITKCYIERTGTPGEVIQRDLNR 175
>gi|357031709|ref|ZP_09093652.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
morbifer G707]
gi|356414939|gb|EHH68583.1| ATP-dependent Clp protease proteolytic subunit [Gluconobacter
morbifer G707]
Length = 204
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 81/199 (40%), Positives = 126/199 (63%), Gaps = 5/199 (2%)
Query: 72 TPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRV 130
P V+ +T GE ++ D+++ L +ER+IF+ + ++ S+ I A +LYL+SV+ +K +
Sbjct: 7 VPMVVEQTSRGERAF---DIYSRLLQERIIFLTGPVYDQVSSLICAQLLYLESVNPTKEI 63
Query: 131 YMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRI 190
YIN PGG V+ LAIYDTMQ ++ PV T C+G A + LLAGGEK +R A+P +R+
Sbjct: 64 SFYINSPGGVVSAGLAIYDTMQYIRCPVSTVCIGQAASMGSLLLAGGEKNHRYALPNARV 123
Query: 191 ALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEA 250
+ P+G A+GQA DI +A E+L +R + + TGQ E+I + L R ++EA
Sbjct: 124 MVHQPSGGAQGQASDIEIQAREILIIRQRLNEIYREHTGQTLEQIERKLERDSYLSAEEA 183
Query: 251 LEYGLIDRII-RPPRIKED 268
E+GLID ++ R P++ E
Sbjct: 184 KEFGLIDEVVRRHPQVSES 202
>gi|428225971|ref|YP_007110068.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
gi|427985872|gb|AFY67016.1| ATP-dependent Clp protease proteolytic subunit ClpP [Geitlerinema
sp. PCC 7407]
Length = 200
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/186 (40%), Positives = 118/186 (63%), Gaps = 1/186 (0%)
Query: 75 VLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYMYI 134
++ G G + D+++ L +ER+IF+GQ +D + +N I+A +L+L++ D K +Y+YI
Sbjct: 4 IVIEQSGRGERAF-DIYSKLLQERIIFLGQPVDSDLANLIVAQLLFLEAEDPEKDIYLYI 62
Query: 135 NGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIALDS 194
N PGG V+ + I+DTM +K V T C+G A + FLLA G KG R ++P SRI +
Sbjct: 63 NSPGGSVSAGMGIFDTMNHVKPDVCTICLGLAASMGAFLLAAGAKGKRMSLPNSRIMIHQ 122
Query: 195 PAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALEYG 254
P G A+GQA DI +A E+L ++ + + L+ +TGQP ++I D R ++EA YG
Sbjct: 123 PLGGAQGQATDIEIQAREILYIKRRLNEILAERTGQPLDRIETDTDRDFFMSAEEARTYG 182
Query: 255 LIDRII 260
LID++I
Sbjct: 183 LIDQVI 188
>gi|444431697|ref|ZP_21226861.1| ATP-dependent Clp protease proteolytic subunit [Gordonia soli NBRC
108243]
gi|443887537|dbj|GAC68582.1| ATP-dependent Clp protease proteolytic subunit [Gordonia soli NBRC
108243]
Length = 201
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 114/188 (60%), Gaps = 2/188 (1%)
Query: 73 PKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDSKRVYM 132
P V+ R+P + +D+++ L ER++++G ID+ +N ++A +L+LDS + + + +
Sbjct: 7 PNVVTRSPA--GERVMDVYSRLLEERILYLGTEIDDGVANALIAQILHLDSDNPEQEIAL 64
Query: 133 YINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPLSRIAL 192
YIN PGG VT A+YDT+Q +P+ T CVG A+ LLA GE+G R +P +R+ L
Sbjct: 65 YINSPGGSVTAAFALYDTLQYCNAPISTTCVGQAFSATALLLAAGERGRRFVLPHARVLL 124
Query: 193 DSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFGSQEALE 252
P+G RG D+ ADE+LRVR I LSR TGQ E + +D R + + E +E
Sbjct: 125 HQPSGQGRGTIPDLILAADEILRVRSEIETALSRHTGQDVETLRRDTDRDRVLRANEIVE 184
Query: 253 YGLIDRII 260
YGL D II
Sbjct: 185 YGLADHII 192
>gi|295136934|ref|YP_003587767.1| ATP-dependent Clp protease proteolytic subunit [Lathyrus sativus]
gi|293338656|gb|ADE43628.1| ATP-dependent Clp protease proteolytic subunit (chloroplast)
[Lathyrus sativus]
Length = 211
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 75/193 (38%), Positives = 119/193 (61%), Gaps = 1/193 (0%)
Query: 68 MPIGTPKVLYRTPGEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDDS 127
MP+G PKV ++ PGE WVDL++ L+ R++F+G I+ E +NQ+ M+YL + +
Sbjct: 1 MPVGVPKVAFQIPGEDEATWVDLYHQLFYSRLLFLGDEIESELANQVAGMMIYLSLENKN 60
Query: 128 KRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMPL 187
K +Y++IN PGG+V +AI+DTMQ +++ V T C+G A +A +LAGG R A P
Sbjct: 61 KDLYLFINSPGGEVMSGMAIFDTMQVVEAQVHTICMGLAASMASLILAGGGITKRLAFPH 120
Query: 188 SRIALDSPAGAA-RGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
+R+ + P A G + + EADE++ +R+ I S++T +P +I+KDL R
Sbjct: 121 ARVMIHQPHSAPYEGPSGECMLEADEMVILRETITAIYSQRTRKPVWQISKDLERDHFMS 180
Query: 247 SQEALEYGLIDRI 259
+EA YG+ID +
Sbjct: 181 PEEAQAYGIIDSV 193
>gi|404330109|ref|ZP_10970557.1| ATP-dependent Clp protease proteolytic subunit [Sporolactobacillus
vineae DSM 21990 = SL153]
Length = 194
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 122/194 (62%), Gaps = 5/194 (2%)
Query: 68 MPIGTPKVLYRTP-GEGSWQWVDLWNALYRERVIFIGQNIDEEFSNQILATMLYLDSVDD 126
MP+ P V+ +T GE ++ D+++ L ++R+I +G ID+ +N ++A +L+L + D
Sbjct: 1 MPL-IPTVIEQTNRGERAY---DIYSRLLKDRIIMLGSAIDDNVANAVVAQLLFLAAEDS 56
Query: 127 SKRVYMYINGPGGDVTPTLAIYDTMQSLKSPVGTHCVGFAYHLAGFLLAGGEKGNRSAMP 186
K + +YIN PGG +T +AIYDTMQ +K V T C+G A + FLL GEKG R A+P
Sbjct: 57 EKDISLYINSPGGSITAGMAIYDTMQYIKPKVSTICIGMAASMGSFLLMAGEKGKRYALP 116
Query: 187 LSRIALDSPAGAARGQADDIRNEADELLRVRDYIFKELSRKTGQPFEKITKDLSRIKRFG 246
S I + P+G +GQA D+ A +L++R+ + + +TGQPFE I +D +R
Sbjct: 117 NSEIMIHQPSGGMQGQASDMEIHAKRILQIREKLNHIYAERTGQPFEVIERDTNRDNFMS 176
Query: 247 SQEALEYGLIDRII 260
++EA +YGLID I+
Sbjct: 177 AEEAKKYGLIDEIL 190
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.138 0.411
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,726,963,686
Number of Sequences: 23463169
Number of extensions: 212331048
Number of successful extensions: 440100
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5774
Number of HSP's successfully gapped in prelim test: 898
Number of HSP's that attempted gapping in prelim test: 431667
Number of HSP's gapped (non-prelim): 6762
length of query: 279
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 139
effective length of database: 9,074,351,707
effective search space: 1261334887273
effective search space used: 1261334887273
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)