BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023632
(279 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|388500070|gb|AFK38101.1| unknown [Lotus japonicus]
gi|388508218|gb|AFK42175.1| unknown [Lotus japonicus]
Length = 373
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 151/253 (59%), Positives = 179/253 (70%), Gaps = 26/253 (10%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEF+DFF ++G+V+++QIMRDHST+RSRGFGFITFD+E AVDDLL+ GNK++ A
Sbjct: 144 VTE---DEFRDFFTRYGEVKDNQIMRDHSTNRSRGFGFITFDSEDAVDDLLSMGNKIDFA 200
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGG 149
G QVE+KKAEPKKPN P PS +RYN+ + +Y SG+G+AY G G G
Sbjct: 201 GTQVEIKKAEPKKPNPPTPSSKRYNDSRSSYSSGYGEAYD------------GFGGSYGA 248
Query: 150 GGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG-FNRGY 208
GGYRSS AY R G YGGY G EFGGYGGY G MG YRG+P SLG++GRYGG F+RGY
Sbjct: 249 AGGYRSSAAYAGRSGAYGGY--GSEFGGYGGYAGAMGPYRGDP-SLGFAGRYGGSFSRGY 305
Query: 209 DVTGDYGGLNESYGGYGGSGVGGGGGYGGGPS--GYDIGLGSSYGGSSGGAFFGSRGGYG 266
D+ G YGG +ESYG YG GGG G GYD L YGG+SGG+F+GSRGGYG
Sbjct: 306 DLGG-YGGASESYGAYGAGAAAGGGSSAAGAYQGGYDASLAGGYGGASGGSFYGSRGGYG 364
Query: 267 GAGGSSRYHPYGR 279
RYHPYGR
Sbjct: 365 AG----RYHPYGR 373
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 50/96 (52%), Gaps = 10/96 (10%)
Query: 14 NRQTTTQKMTGLSLTP--------VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGF 65
++ +Q +TG +P E + +F F ++G++ + IM+D T++ RGF
Sbjct: 29 DQHHNSQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMKDRKTAQPRGF 88
Query: 66 GFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
GFIT+ VD ++ + + G QVE+K+ P+
Sbjct: 89 GFITYADPSVVDKVIEDTHIIN--GKQVEIKRTIPR 122
>gi|359488807|ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
vinifera]
Length = 2363
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 122/198 (61%), Positives = 139/198 (70%), Gaps = 23/198 (11%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE +EFKDFF Q+G+V++HQIMRDHSTSRSRGFGF+TFDTEQAVDDLL++GNKLELA
Sbjct: 2127 VTE---EEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELA 2183
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGG 149
GAQVE+KKAEPKKPN P P RRY++ +P +G GFGDAY G G G
Sbjct: 2184 GAQVEIKKAEPKKPNPPVPPSRRYSDSRPGFGGGFGDAYA------------GFGGSSFG 2231
Query: 150 GGGYRSSGAYGVRGGGYG-------GYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYG 202
G YRS GAYG R Y G G GG G GGG+G YRGEP SLGYSGRYG
Sbjct: 2232 NGPYRSGGAYGSRASAYAGYGGSEFGGYGGYGGGGSSGGGGGIGTYRGEPPSLGYSGRYG 2291
Query: 203 G-FNRGYDVTGDYGGLNE 219
G FNRGYD+ G +GG +E
Sbjct: 2292 GSFNRGYDLGGSHGGPSE 2309
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+F F ++G++ + IM+D T + RGFGF+T+ VD ++ + + G QVE+K
Sbjct: 2043 QFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQDTHVIN--GKQVEIK 2100
Query: 97 KAEPK 101
+ PK
Sbjct: 2101 RTIPK 2105
>gi|356571134|ref|XP_003553735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
2-like [Glycine max]
Length = 374
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 140/252 (55%), Positives = 166/252 (65%), Gaps = 24/252 (9%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEF+DFF ++G+V++HQIMRDHST+RSRGFGFIT+D+E+AVDDLL+ GNK+E A
Sbjct: 145 VTE---DEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFA 201
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGG 149
GAQVE+KKAEPKKPN P PS +RYN+ + +YG G G G+ G GG G
Sbjct: 202 GAQVEIKKAEPKKPNPPAPSSKRYNDSRSSYGGG-------------YGDGYDGFGGNFG 248
Query: 150 GGGYRSSGAYGVRG--GGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGGFNRG 207
GGYRS GAYG RG G YGG+ G EFGGYGGY MG YRG+PS GG+ RG
Sbjct: 249 MGGYRSGGAYGGRGSAGAYGGF--GSEFGGYGGYASAMGPYRGDPSLGYAGRYGGGYGRG 306
Query: 208 YDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGSSGGAFFGSRGGYGG 267
G S G GVGGG S YD LG YGG +GG+F+G+RGGY G
Sbjct: 307 ---YDLGGYGGPSDGYGAYGGVGGGSSGSAYGSSYDASLGGGYGGPAGGSFYGTRGGYAG 363
Query: 268 AGGSSRYHPYGR 279
A G+ RYHPYGR
Sbjct: 364 A-GTGRYHPYGR 374
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + +F F ++G++ + IM+D T + RGFGFIT+ VD ++ + + G
Sbjct: 54 ETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDTHIIN--GK 111
Query: 92 QVEVKKAEPK 101
QVE+K+ P+
Sbjct: 112 QVEIKRTIPR 121
>gi|449446702|ref|XP_004141110.1| PREDICTED: LOW QUALITY PROTEIN: nuclear pore membrane glycoprotein
210-like [Cucumis sativus]
Length = 2257
Score = 171 bits (432), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 138/252 (54%), Positives = 163/252 (64%), Gaps = 25/252 (9%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEF+DFFMQ+G V+EHQIMRDHSTSRSRGFGFITF+TEQAVDDLLA GN+LE+AG+QVE+
Sbjct: 2023 DEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEI 2082
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYRS 155
KKAEPKK N P +R+++ +P+Y +GDAY G GGGG GG +R+
Sbjct: 2083 KKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAY-------------GEFGGGGYGGSFRA 2129
Query: 156 SGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG-FNRGYDVTGDY 214
G YG RGGGYGGYG G GGMGAYR +P S+GYS RYG F+RGYD G Y
Sbjct: 2130 GGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDP-SMGYSARYGASFSRGYDFRGGY 2188
Query: 215 GGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGG-------SSGGAFFGSRGGYGG 267
GG +ESYG Y G GGY G YD+G+G+ Y S G G G
Sbjct: 2189 GGPDESYGAYNSGGAPSTGGYAG---SYDMGMGTGYAAGGRGSFYGSRGGGGGGGYDGAG 2245
Query: 268 AGGSSRYHPYGR 279
+ S RYHPYGR
Sbjct: 2246 SAPSGRYHPYGR 2257
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+F F +G++ + IM+D T RGFGF+T+ VD ++ + + G QVE+K
Sbjct: 1936 QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIIN--GKQVEIK 1993
Query: 97 KAEPK 101
+ PK
Sbjct: 1994 RTIPK 1998
>gi|255560914|ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
gi|223539369|gb|EEF40960.1| RNA binding protein, putative [Ricinus communis]
Length = 2256
Score = 160 bits (406), Expect = 4e-37, Method: Composition-based stats.
Identities = 78/101 (77%), Positives = 86/101 (85%), Gaps = 7/101 (6%)
Query: 28 TPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 87
T VTE EFK+FFMQ+G+V EHQIMRDHST+RSRGFGFITFDTEQAVDDLLAKGNKLE
Sbjct: 2024 TTVTEV---EFKEFFMQYGEVIEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLAKGNKLE 2080
Query: 88 LAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAY 128
LAG QVE+KKAEPKKPN P PS +RYN+ +P GFGDAY
Sbjct: 2081 LAGGQVEIKKAEPKKPNPPLPSSKRYNDSRP----GFGDAY 2117
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 48/92 (52%), Gaps = 4/92 (4%)
Query: 10 TMFINRQTTTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFIT 69
T F R+ +K+ L T A +F F ++G++ + IM+D T + RGFGF+T
Sbjct: 1917 TPFYKREARRRKIFIGGLARETTTA--QFVKHFGKYGEITDSVIMKDRKTGQPRGFGFVT 1974
Query: 70 FDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
+ VD ++ + + G QVE+K+ PK
Sbjct: 1975 YADPSVVDQVIQDSHVIN--GKQVEIKRTIPK 2004
>gi|356558851|ref|XP_003547716.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Glycine
max]
Length = 372
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 101/164 (61%), Positives = 121/164 (73%), Gaps = 18/164 (10%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEF+DFF ++G+V++HQIMRDHST+RSRGFGFIT+D+E+AVDDLL+ GNK+E A
Sbjct: 143 VTE---DEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITYDSEEAVDDLLSVGNKIEFA 199
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGG 149
GAQVE+KKAEPKKPN P PS +RYN+ + +YG G G + G GG G
Sbjct: 200 GAQVEIKKAEPKKPNPPAPSSKRYNDSRSSYGGG-------------YGDAYDGFGGNFG 246
Query: 150 GGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPS 193
GGYRS GAYG RG YGG+ G EFGGYGGY G MG YRG+PS
Sbjct: 247 MGGYRSGGAYGGRGSAYGGF--GSEFGGYGGYAGAMGPYRGDPS 288
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + +F F ++G++ + IM+D T + RGFGFIT+ VD ++ + + G
Sbjct: 52 ETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYADPSVVDTVIEDTHIIN--GK 109
Query: 92 QVEVKKAEPK 101
QVE+K+ P+
Sbjct: 110 QVEIKRTIPR 119
>gi|356513961|ref|XP_003525676.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Glycine max]
Length = 2304
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 125/246 (50%), Positives = 154/246 (62%), Gaps = 21/246 (8%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEF+DFF ++G+V++HQIMRDHST+RSRGFGFITFD+E+AVDDLL+ GNK++ AG+QVE+
Sbjct: 2078 DEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFDSEEAVDDLLSMGNKIDFAGSQVEI 2137
Query: 96 KKAEPKKPNLPQPSYRRYNN-PKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYR 154
KKAEPKKP+ PS +R+N+ G+GD Y G+GG GGG+ G GGG G
Sbjct: 2138 KKAEPKKPSSAPPSSKRHNDSRSSYSSGGYGDTYDGFGGSFGMGGGYRSGGAYGGGRGGA 2197
Query: 155 SSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG-FNRGYDVTGD 213
G G GYGGY GE G YRG+ SLGY+GRYGG F+RGYD+ G
Sbjct: 2198 YGGFGSEFG-GYGGY--AGEMG----------PYRGD-LSLGYAGRYGGNFSRGYDL-GG 2242
Query: 214 YGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGSSGGAFFGSRGGYGGAGGSSR 273
YGG +E+YG YG G GGG G G S G + SR GY + R
Sbjct: 2243 YGGPSENYGAYGAGGGSSGGGGAYQSGYDGNLGGGYGGASGGPFYGSSRAGY----SAGR 2298
Query: 274 YHPYGR 279
YHPYGR
Sbjct: 2299 YHPYGR 2304
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 13 INRQTTTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 72
IN Q T + GL+ E + +F F ++G++ + IM+D T + RGFGFIT+
Sbjct: 1971 INPQNTKIFIGGLA----RETTIAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFITYAD 2026
Query: 73 EQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
VD ++ + + G QVE+K+ P+
Sbjct: 2027 PSVVDKVIEDPHIIN--GKQVEIKRTIPR 2053
>gi|242053621|ref|XP_002455956.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
gi|241927931|gb|EES01076.1| hypothetical protein SORBIDRAFT_03g027920 [Sorghum bicolor]
Length = 349
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 110/169 (65%), Gaps = 17/169 (10%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGNKLELAGAQVE 94
DEFK+FF +FG V EH+I+RDH+T+RSRGFGFI FD E+ VDDLLA KGN ++L G+QVE
Sbjct: 116 DEFKEFFSKFGKVVEHEIIRDHTTNRSRGFGFIVFDAEKTVDDLLAKKGNMIDLNGSQVE 175
Query: 95 VKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYR 154
+KKAEPKKP+ QP + P+ G + D+Y G+G GG F G YR
Sbjct: 176 IKKAEPKKPS-NQPPRSLDSEPR---GRPYADSYDGFGSSYNYGGSF---------GPYR 222
Query: 155 SSGAYGVRGGGYGGYGVGGEFG-GYGGYGGGMGAYRGEPSSLGYSGRYG 202
S G++G R GGY G++G GY YGG + YRGEPS YS RYG
Sbjct: 223 SPGSFGARPGGYNSASGPGDYGSGYATYGGALVGYRGEPSL--YSSRYG 269
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 34 ALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQV 93
++ FK+ F ++GD+ + IM+D T + RGFGFITF VD ++ ++ + G V
Sbjct: 26 SMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPAVVDRVIE--DEHVINGKLV 83
Query: 94 EVKKAEPK 101
E+K+ PK
Sbjct: 84 EIKRTIPK 91
>gi|296087606|emb|CBI34862.3| unnamed protein product [Vitis vinifera]
Length = 281
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 88/138 (63%), Positives = 101/138 (73%), Gaps = 15/138 (10%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE +EFKDFF Q+G+V++HQIMRDHSTSRSRGFGF+TFDTEQAVDDLL++GNKLELA
Sbjct: 140 VTE---EEFKDFFTQYGEVKDHQIMRDHSTSRSRGFGFVTFDTEQAVDDLLSQGNKLELA 196
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGG 149
GAQVE+KKAEPKKPN P P RRY++ +P +G GFGDAY G G G
Sbjct: 197 GAQVEIKKAEPKKPNPPVPPSRRYSDSRPGFGGGFGDAYA------------GFGGSSFG 244
Query: 150 GGGYRSSGAYGVRGGGYG 167
G YRS GAYG R Y
Sbjct: 245 NGPYRSGGAYGSRASAYA 262
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+F F ++G++ + IM+D T + RGFGF+T+ VD ++ + + G QVE+K
Sbjct: 56 QFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADLSVVDQVIQDTHVIN--GKQVEIK 113
Query: 97 KAEPK 101
+ PK
Sbjct: 114 RTIPK 118
>gi|363807276|ref|NP_001242362.1| uncharacterized protein LOC100793209 [Glycine max]
gi|255636483|gb|ACU18580.1| unknown [Glycine max]
Length = 377
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 111/193 (57%), Positives = 138/193 (71%), Gaps = 19/193 (9%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEF+DFF ++G+V++HQIMRDHST+RSRGFGFITF++E+AVDDLL+ GNK++ A
Sbjct: 141 VTE---DEFRDFFTRYGEVKDHQIMRDHSTNRSRGFGFITFESEEAVDDLLSMGNKIDFA 197
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNN-PKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGG 148
GAQVE+KKAEPKKPN PS +RYN+ G+GDAY G+GG GGG+ G G
Sbjct: 198 GAQVEIKKAEPKKPNSAPPSSKRYNDSRSSYSSGGYGDAYDGFGGSFGMGGGYRSGGAYG 257
Query: 149 GGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG-FNRG 207
GG G + G + EFGGYGGY G MG YRG+P SLGY+GRYGG F+RG
Sbjct: 258 GGRGSGAYGGH------------ASEFGGYGGYAGAMGPYRGDP-SLGYAGRYGGSFSRG 304
Query: 208 YDVTGDYGGLNES 220
YD+ G YGG +E+
Sbjct: 305 YDLGG-YGGPSEN 316
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 56/106 (52%), Gaps = 12/106 (11%)
Query: 6 TEILTMFINRQT--TTQKMTGLSLTP--------VTEPALDEFKDFFMQFGDVQEHQIMR 55
+++T F +R+ +Q +TG +P E + +F F ++G++ + IM+
Sbjct: 16 NDVVTPFSHREEPHNSQPLTGDGASPGKIFIGGLARETTIAQFIKHFGKYGEITDSVIMK 75
Query: 56 DHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
D T + RGFGFIT+ VD ++ + + + G QVE+K+ P+
Sbjct: 76 DRKTGQPRGFGFITYADPSVVDKVIEEPHVIN--GKQVEIKRTIPR 119
>gi|449533873|ref|XP_004173895.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like,
partial [Cucumis sativus]
Length = 270
Score = 137 bits (346), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 107/175 (61%), Positives = 127/175 (72%), Gaps = 15/175 (8%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEF+DFFMQ+G V+EHQIMRDHSTSRSRGFGFITF+TEQAVDDLLA GN+LE+AG+QVE+
Sbjct: 108 DEFRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEI 167
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYRS 155
KKAEPKK N P +R+++ +P+Y +GDAY G GGGG GG +R+
Sbjct: 168 KKAEPKKANPPPAPSKRFHDSRPSYSGAYGDAY-------------GEFGGGGYGGSFRA 214
Query: 156 SGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG-FNRGYD 209
G YG RGGGYGGYG G GGMGAYR +P S+GYS RYG F+RGYD
Sbjct: 215 GGPYGARGGGYGGYGGNDFSGYGMYGTGGMGAYREDP-SMGYSARYGASFSRGYD 268
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 2/65 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+F F +G++ + IM+D T RGFGF+T+ VD ++ + + G QVE+K
Sbjct: 21 QFVKHFGDYGEITDSVIMKDRKTGHPRGFGFVTYADPSVVDKVIEDTHIIN--GKQVEIK 78
Query: 97 KAEPK 101
+ PK
Sbjct: 79 RTIPK 83
>gi|414868392|tpg|DAA46949.1| TPA: hypothetical protein ZEAMMB73_935024 [Zea mays]
Length = 348
Score = 134 bits (336), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 104/168 (61%), Gaps = 18/168 (10%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE 94
DEFK+FF +FG V EH+I+RDH+T+RSRGFGFI FD E+AVDDLL KGN ++L G+QVE
Sbjct: 116 DEFKEFFSKFGKVVEHEIIRDHATNRSRGFGFIVFDAEKAVDDLLHKKGNMIDLNGSQVE 175
Query: 95 VKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYR 154
+KKAEPKKP+ QP + P+ G + D+Y G+G GG F G YR
Sbjct: 176 IKKAEPKKPS-NQPPRSLDSEPR---GRPYADSYDGFGSSYNYGGSF---------GPYR 222
Query: 155 SSGAYGVRGGGY-GGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRY 201
S ++G R Y YG G GY YGG + YR EPS YS RY
Sbjct: 223 SPRSFGARPSSYSSAYGPGDYGSGYATYGGALVGYR-EPSL--YSSRY 267
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 2/68 (2%)
Query: 34 ALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQV 93
++ FK+ F ++GD+ + IM+D T + RGFGFITF VD ++ ++ + G V
Sbjct: 26 SMSTFKEHFGKYGDIIDAVIMKDRYTQKPRGFGFITFADPTVVDRVIE--DEHVINGKPV 83
Query: 94 EVKKAEPK 101
E+K+ PK
Sbjct: 84 EIKRTIPK 91
>gi|449489576|ref|XP_004158353.1| PREDICTED: nuclear pore membrane glycoprotein 210-like [Cucumis
sativus]
Length = 1758
Score = 133 bits (335), Expect = 8e-29, Method: Composition-based stats.
Identities = 99/201 (49%), Positives = 121/201 (60%), Gaps = 26/201 (12%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F+DFFMQ+G V+EHQIMRDHSTSRSRGFGFITF+TEQAVDDLLA GN+LE+AG+QVE+KK
Sbjct: 1525 FRDFFMQYGVVKEHQIMRDHSTSRSRGFGFITFETEQAVDDLLANGNRLEMAGSQVEIKK 1584
Query: 98 AEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGG------------------ 139
AEPKK N P +R+++ +P+Y +GDAYG +GGGG+ G
Sbjct: 1585 AEPKKANPPPAPSKRFHDSRPSYSGAYGDAYGEFGGGGYGGSFRAGGPYGARGGGYGGYG 1644
Query: 140 ----GFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEF-GGYGGYGGGMGAYR--GEP 192
G G GG G YR + G + G +F GGYGG GAY G P
Sbjct: 1645 GNDFSGYGMYGTGGMGAYREDPSMGYSARYGASFSRGYDFRGGYGGPDESYGAYNSGGAP 1704
Query: 193 SSLGYSGRYG-GFNRGYDVTG 212
S+ GY+G Y G GY G
Sbjct: 1705 STGGYAGSYDMGMGTGYAAGG 1725
>gi|357148248|ref|XP_003574688.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Brachypodium distachyon]
Length = 359
Score = 128 bits (322), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 123/273 (45%), Positives = 151/273 (55%), Gaps = 29/273 (10%)
Query: 15 RQTTTQKMT--GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 72
R T+K+ GL T +TE D+FKDFF ++G V +HQIMRDH T RSRGFGF+ F +
Sbjct: 107 RDFKTKKIFVGGLPST-LTE---DDFKDFFEKYGTVVDHQIMRDHQTRRSRGFGFVVFCS 162
Query: 73 EQAVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYG 132
EQ VDDLLA GN ++LAG++VE+KKAEPKK + P PS ++ + AY D G
Sbjct: 163 EQVVDDLLANGNMIDLAGSKVEIKKAEPKKSSNPPPS--GGSDSRSAYSRDSRDRPSGND 220
Query: 133 GGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEP 192
GG AGG S GGG G YR+ GA+G G G GVG G YG Y G+G Y G
Sbjct: 221 HGGLAGG--YNSFNGGGFGPYRNLGAFG--GSLGGHGGVGDYHGRYGRYYAGLGGYEGM- 275
Query: 193 SSLGYSGRYGGFNRGYDVTGDYGGLNESYGGY-------GGSGVGGGGGYGGGPSGYDIG 245
SS GY R+ + G+D G Y G N + GY G G G YD
Sbjct: 276 SSFGYPSRFAPYGGGFD--GPYAGGN--FSGYRRGGDESFGGPGSSSFGGGMYGGPYDPA 331
Query: 246 LGSSYGGSSGGAFFGSRGGYGGAGGSSRYHPYG 278
LG GS+ +RG +GGA G RYHPYG
Sbjct: 332 LGGYGPGSTPDM---NRGSFGGASG--RYHPYG 359
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
T PA+ F+ F Q+G++ + IM++ TS+ RGFGFIT+ VD ++ + + G
Sbjct: 33 TTPAV--FQKHFGQYGEIIDSVIMKNKHTSQPRGFGFITYADPAVVDHVMEDSHVIN--G 88
Query: 91 AQVEVKKAEPK 101
QVE+K+ PK
Sbjct: 89 KQVEIKRTIPK 99
>gi|148909135|gb|ABR17668.1| unknown [Picea sitchensis]
Length = 411
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 116/185 (62%), Gaps = 20/185 (10%)
Query: 28 TPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 87
T +TE DEFKD+F +FG V EHQIM+D +T RSRGFGFITF+TEQAV++++++G LE
Sbjct: 138 TSITE---DEFKDYFSKFGKVVEHQIMQDRNTGRSRGFGFITFETEQAVEEIISQGRMLE 194
Query: 88 LAGAQVEVKKAEPKKPNLPQ--PSYRRYNNPK--PAYGSGFGDAYGGYGGGGFAGGGFGG 143
L G QVE+KKAEPKKP LP P Y + P P GFGD+Y G+GG G+
Sbjct: 195 LGGKQVEIKKAEPKKP-LPDAGPIYGVDSRPPYIPGGVGGFGDSYNGFGGAGY------- 246
Query: 144 SGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGG 203
G YRS+G YG R GG+ GYG GYGGY GG E +S GY GR G
Sbjct: 247 -----GSNPYRSAGGYGDRPGGFAGYGGPDYGRGYGGYSGGSLGSYTEDASRGYGGRAGS 301
Query: 204 FNRGY 208
++ G+
Sbjct: 302 YSEGF 306
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F ++G++ + IM+D T + RGFGF+T+ +D ++ +K L G VE+K+
Sbjct: 58 FTKHFSKYGELTDSVIMKDRLTGQPRGFGFVTYADPSVIDKVIQ--DKHILDGKTVEIKR 115
Query: 98 AEPK 101
P+
Sbjct: 116 TIPR 119
>gi|307940740|gb|ADN95984.1| G-strand specific single-stranded telomere-binding protein 2
[Nicotiana tabacum]
Length = 337
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 87/181 (48%), Positives = 109/181 (60%), Gaps = 29/181 (16%)
Query: 28 TPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 87
T +TE DEFK+FF +FG V E++I+RDH + RSRGFGFI FD EQ VD+LLA+GN+ +
Sbjct: 112 TTMTE---DEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNRTD 168
Query: 88 LAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGS-----GFGDAYGGYGG--GGFAGGG 140
+ G QVE+KKAEPKKP+ P + PAYGS G+GD+YGG+G GF G
Sbjct: 169 MMGTQVEIKKAEPKKPSNPASA--------PAYGSDSRGRGYGDSYGGFGNSYSGFGSGS 220
Query: 141 FGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGR 200
FG + YRS +G R G YG G G G YRG+P SLGYS R
Sbjct: 221 FGPA-------SYRS---FGARFGEYGYGGGEFGGRYGDFGGSDFGGYRGDP-SLGYSSR 269
Query: 201 Y 201
+
Sbjct: 270 F 270
Score = 60.1 bits (144), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E L++F +F ++G++ + IM+D T R RGFGFIT++ VD ++A+ + +
Sbjct: 25 ETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAENHIIN--DK 82
Query: 92 QVEVKKAEPK 101
QVE+K+ PK
Sbjct: 83 QVEIKRTIPK 92
>gi|297805630|ref|XP_002870699.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
gi|297316535|gb|EFH46958.1| hypothetical protein ARALYDRAFT_493936 [Arabidopsis lyrata subsp.
lyrata]
Length = 421
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEFK+FFMQFG+++EHQIMRDHST RSRGFGF+T+++E VD LLAKGN++EL+G QVE+
Sbjct: 144 DEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEI 203
Query: 96 KKAEPKKPN-LPQPSYR 111
KKAEPKKPN + PS R
Sbjct: 204 KKAEPKKPNSVTTPSKR 220
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
EF F ++G++ + IM+D T + RGFGF+T+ VD ++ + N + + G QVE+K
Sbjct: 57 EFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVI-QDNHI-IIGKQVEIK 114
Query: 97 KAEPK 101
+ P+
Sbjct: 115 RTIPR 119
>gi|15242719|ref|NP_198865.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
gi|9758076|dbj|BAB08520.1| unnamed protein product [Arabidopsis thaliana]
gi|22531255|gb|AAM97131.1| ribonucleoprotein-like [Arabidopsis thaliana]
gi|332007170|gb|AED94553.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Arabidopsis
thaliana]
Length = 423
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 55/77 (71%), Positives = 68/77 (88%), Gaps = 1/77 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEFK+FFMQFG+++EHQIMRDHST RSRGFGF+T+++E VD LLAKGN++EL+G QVE+
Sbjct: 144 DEFKEFFMQFGELKEHQIMRDHSTGRSRGFGFVTYESEDMVDHLLAKGNRIELSGTQVEI 203
Query: 96 KKAEPKKPN-LPQPSYR 111
KKAEPKKPN + PS R
Sbjct: 204 KKAEPKKPNSVTTPSKR 220
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 2/65 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
EF F ++G++ + IM+D T + RGFGF+T+ VD ++ + N + + G QVE+K
Sbjct: 57 EFLKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADSSVVDKVI-QDNHI-IIGKQVEIK 114
Query: 97 KAEPK 101
+ P+
Sbjct: 115 RTIPR 119
>gi|115475858|ref|NP_001061525.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|35215091|dbj|BAC92448.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|42409159|dbj|BAD10426.1| RNA recognition motif (RRM)-containing protein-like [Oryza sativa
Japonica Group]
gi|113623494|dbj|BAF23439.1| Os08g0320100 [Oryza sativa Japonica Group]
gi|215768436|dbj|BAH00665.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218200931|gb|EEC83358.1| hypothetical protein OsI_28764 [Oryza sativa Indica Group]
gi|258644640|dbj|BAI39889.1| ribonucleoprotein-like [Oryza sativa Indica Group]
Length = 350
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/169 (52%), Positives = 111/169 (65%), Gaps = 19/169 (11%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGNKLELAGAQVE 94
DEFK+FF +FG V EH+I+RDHST+RSRGFGF+ FD E+ VD+LLA KGN ++L G+QVE
Sbjct: 117 DEFKEFFSKFGKVVEHEIIRDHSTNRSRGFGFVVFDAEKTVDELLAKKGNMIDLNGSQVE 176
Query: 95 VKKAEPKKPNLPQPSYRRYNN-PKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGY 153
+KKAEPKKP+ P +R +++ P+ G D Y G G GG F G Y
Sbjct: 177 IKKAEPKKPS--NPPHRSFDSEPR---GRPHADGYDGLGNSYNYGGSF---------GPY 222
Query: 154 RSSGAYGVRGGGY-GGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRY 201
RS G++G R GGY YG G GYG YGG +G YRGE SSL YS R+
Sbjct: 223 RSPGSFGTRPGGYSSSYGPGDYGSGYGAYGGALGGYRGE-SSL-YSSRF 269
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 43/64 (67%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
FK++F ++G++ + IM+D T + RGFGFITF + AV D + + N + + G +VE+K+
Sbjct: 31 FKEYFGKYGEIVDAVIMKDRFTQKPRGFGFITF-ADPAVVDRVIEDNHV-INGKEVEIKR 88
Query: 98 AEPK 101
PK
Sbjct: 89 TIPK 92
>gi|115477046|ref|NP_001062119.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|42408771|dbj|BAD10006.1| putative ribonucleoprotein [Oryza sativa Japonica Group]
gi|113624088|dbj|BAF24033.1| Os08g0492100 [Oryza sativa Japonica Group]
gi|215765667|dbj|BAG87364.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201366|gb|EEC83793.1| hypothetical protein OsI_29708 [Oryza sativa Indica Group]
gi|222640778|gb|EEE68910.1| hypothetical protein OsJ_27766 [Oryza sativa Japonica Group]
Length = 362
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 118/259 (45%), Positives = 143/259 (55%), Gaps = 36/259 (13%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+FK FF ++G V +HQIMRDH T RSRGFGFI F ++Q VDDLLA GN ++LAGA+VE+
Sbjct: 125 DDFKHFFQKYGPVVDHQIMRDHQTKRSRGFGFIVFSSDQVVDDLLANGNMIDLAGAKVEI 184
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGG------GG 149
KKAEPKK + P PS ++GS AYG G +G +GG GG
Sbjct: 185 KKAEPKKSSNPPPS---------SHGSASRSAYGRDSRGHSSGNDYGGLANAYSNYNSGG 235
Query: 150 GGGYRSSGAYGVRGGGYGGYGVGGEFG-GYGGYGGGMGAYRGEPSSLGYSGRYGGFNRGY 208
G YR+ G YG GG GYG GE+G YG Y G+G G S GY+ R G + G+
Sbjct: 236 FGPYRNHGVYG--GGSLSGYGGIGEYGVQYGRYYPGLGG-SGSMPSFGYASRVGPYGGGF 292
Query: 209 DVTGDYGGLN--------ESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGSSGGAFFG 260
D G Y G N + G S GG YGG + YD LG G +SG
Sbjct: 293 D--GPYAGGNLSGYRRGGDESFGGLSSSSFGGAMYGG--AAYDPALG---GYASGSTPER 345
Query: 261 SRGGYGGAGGSSRYHPYGR 279
SRG AGGS RY+PYGR
Sbjct: 346 SRGNL--AGGSGRYNPYGR 362
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+F F Q+G++ + IMRD TS+ RGFGFIT+ VD ++ + E G QVE+K
Sbjct: 38 DFVKHFGQYGEIVDSVIMRDKHTSQPRGFGFITYSNPAVVDRVM--DDIHEFNGKQVEIK 95
Query: 97 KAEPK 101
+ PK
Sbjct: 96 RTIPK 100
>gi|219362753|ref|NP_001137092.1| uncharacterized protein LOC100217268 [Zea mays]
gi|194698334|gb|ACF83251.1| unknown [Zea mays]
gi|323388723|gb|ADX60166.1| SNF2 transcription factor [Zea mays]
gi|413925208|gb|AFW65140.1| hypothetical protein ZEAMMB73_790427 [Zea mays]
Length = 383
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 74/144 (51%), Positives = 89/144 (61%), Gaps = 9/144 (6%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEFK FF ++G V +HQIM DH T RSRGFGFI F +EQ VDDLLA GN ++LAG++VE+
Sbjct: 129 DEFKSFFARYGTVVDHQIMFDHETKRSRGFGFIVFASEQVVDDLLANGNMVDLAGSKVEI 188
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGD--AYGGYGGGGFAGGGFGGSGGGGGGGGY 153
KKAEPKK + P N + AY SG D + YGG A G + GGG G Y
Sbjct: 189 KKAEPKKSSNAPPPPVHVRNARSAYDSGSRDHPSADNYGGMASAYGNY----RGGGFGPY 244
Query: 154 RSSGAYGVRGGGYGGYGVGGEFGG 177
RS +G R YGG G+FGG
Sbjct: 245 RSDTGFGARLSSYGGV---GDFGG 265
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F Q+G++ + IM+D TS+ RGFGFIT+ VD ++ + + G QVE+K+
Sbjct: 41 FVRHFGQYGEIVDSVIMKDRHTSQPRGFGFITYSDPAVVDKVIEDNHVIN--GKQVEIKR 98
Query: 98 AEPK 101
PK
Sbjct: 99 TIPK 102
>gi|307940742|gb|ADN95985.1| G-strand specific single-stranded telomere-binding protein 3
[Nicotiana tabacum]
Length = 339
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/112 (54%), Positives = 80/112 (71%), Gaps = 16/112 (14%)
Query: 28 TPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 87
T +TE DEFK+FF +FG V E++I+RDH + RSRGFGFI FD EQ VD+LLA+GN+++
Sbjct: 112 TTMTE---DEFKNFFSKFGKVTEYEIIRDHVSKRSRGFGFIVFDNEQVVDNLLAEGNRID 168
Query: 88 LAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGS-----GFGDAYGGYGGG 134
+ G QVE+KKAEPKKP+ P + PAYGS G+GD+YGG+G
Sbjct: 169 MMGTQVEIKKAEPKKPSNPASA--------PAYGSDSRGRGYGDSYGGFGNS 212
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E L++F +F ++G++ + IM+D T R RGFGFIT++ VD ++A+ + +
Sbjct: 25 ETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYEDPSVVDTVIAEYHIIN--DK 82
Query: 92 QVEVKKAEPK 101
QVE+K+ PK
Sbjct: 83 QVEIKRTIPK 92
>gi|357145619|ref|XP_003573706.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Brachypodium
distachyon]
Length = 347
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 81/133 (60%), Gaps = 15/133 (11%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGNKLELAGAQVE 94
DEFKDFF +FG V EH+I+RDHST++SRGFGFI FD E+ VD+LLA KGN ++L G QVE
Sbjct: 116 DEFKDFFSKFGKVVEHEIIRDHSTNKSRGFGFIVFDAEKTVDELLAKKGNMIDLDGTQVE 175
Query: 95 VKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYR 154
+KKAEPKKP+ P S+ N P+ D Y G+ GG YR
Sbjct: 176 IKKAEPKKPSNPPHSFD--NKPR---SRPHADGYDGFN---------SSYSYGGSLAPYR 221
Query: 155 SSGAYGVRGGGYG 167
S G++G R Y
Sbjct: 222 SPGSFGARPSSYA 234
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E +L FK++F ++G++ + IM+D T + RGFGFITF VD ++ + ++ G
Sbjct: 24 ETSLGTFKEYFGKYGEIIDAVIMKDRYTQKPRGFGFITFSDPAIVDRVIEDNHVID--GK 81
Query: 92 QVEVKKAEPK 101
QVE+K+ PK
Sbjct: 82 QVEIKRTIPK 91
>gi|148905890|gb|ABR16107.1| unknown [Picea sitchensis]
gi|224285605|gb|ACN40521.1| unknown [Picea sitchensis]
gi|224285970|gb|ACN40697.1| unknown [Picea sitchensis]
Length = 371
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 80/120 (66%), Gaps = 23/120 (19%)
Query: 28 TPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 87
T +TE DEFKD+F +FG V EHQIM+DH T RSRGFGF+TFD+E+AV+++L+ G E
Sbjct: 148 TSITE---DEFKDYFSKFGKVLEHQIMQDHGTGRSRGFGFVTFDSEEAVEEILSHGKMCE 204
Query: 88 LAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYG-----------SGFGDAYGGYGGGGF 136
L G QVE+KKAEPKK LP+ P+PAYG G+GDAYGG G G +
Sbjct: 205 LGGKQVEIKKAEPKK-ALPE--------PEPAYGMDGRPPFIPGARGYGDAYGGVGAGDY 255
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F +F ++G++ + IM+D +T RGFGF+T+ VD ++ +K + G VE+K+
Sbjct: 67 FTKYFSKYGELTDSVIMKDRATGNPRGFGFVTYADPSVVDKVIK--DKHFIDGKMVEIKR 124
Query: 98 AEPK 101
P+
Sbjct: 125 TIPR 128
>gi|326501296|dbj|BAJ98879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 354
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 83/128 (64%), Gaps = 12/128 (9%)
Query: 19 TQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 78
T+K+ L P+ D+FKDFF ++G V EHQIMRDH T RSRGFGF+ F++E+ VDD
Sbjct: 112 TKKIFVGGLPPIL--TEDDFKDFFEKYGAVVEHQIMRDHQTRRSRGFGFVVFESEEVVDD 169
Query: 79 LLAKGNKLELAGAQVEVKKAEPKK-PNLP-------QPSYRRYNNPKPAYGS--GFGDAY 128
LLA GN ++LAG++VE+KKAEPKK NLP + +Y R +P+ G DAY
Sbjct: 170 LLANGNMIDLAGSKVEIKKAEPKKSSNLPTSTGSDSRSAYGRDCRDRPSGDDRGGLADAY 229
Query: 129 GGYGGGGF 136
Y GGF
Sbjct: 230 SSYNSGGF 237
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Query: 34 ALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQV 93
L F+ F +G + + IM++ TS+ RGFGFIT+ VD ++ + + G QV
Sbjct: 35 TLATFQKHFGNYGVIVDSVIMKNKQTSQPRGFGFITYSDPAVVDKVMEDTHVIN--GKQV 92
Query: 94 EVKKAEPK 101
E+K+ PK
Sbjct: 93 EIKRTIPK 100
>gi|225461983|ref|XP_002271592.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C [Vitis
vinifera]
gi|147768836|emb|CAN78130.1| hypothetical protein VITISV_036088 [Vitis vinifera]
Length = 348
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 71/94 (75%), Gaps = 11/94 (11%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEFK+FF ++G V EHQI+RDH T+RSRGFGFI FD+E+ VD++++KGN +++A
Sbjct: 118 VTE---DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMA 174
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG 123
G QVE+KKAEPKK + P P+ PAYGS
Sbjct: 175 GTQVEIKKAEPKKASNPPPA--------PAYGSN 200
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F ++GD+ + IM+D T + RGFGFIT+ VD ++ + + G QVE+K+
Sbjct: 35 FNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVIN--GKQVEIKR 92
Query: 98 AEPK 101
PK
Sbjct: 93 TIPK 96
>gi|296089958|emb|CBI39777.3| unnamed protein product [Vitis vinifera]
Length = 293
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 54/94 (57%), Positives = 71/94 (75%), Gaps = 11/94 (11%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEFK+FF ++G V EHQI+RDH T+RSRGFGFI FD+E+ VD++++KGN +++A
Sbjct: 118 VTE---DEFKNFFSKYGKVVEHQIIRDHETNRSRGFGFIIFDSEEVVDEMISKGNMIDMA 174
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG 123
G QVE+KKAEPKK + P P+ PAYGS
Sbjct: 175 GTQVEIKKAEPKKASNPPPA--------PAYGSN 200
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F ++GD+ + IM+D T + RGFGFIT+ VD ++ + + G QVE+K+
Sbjct: 35 FNKHFGKYGDITDSVIMKDRYTGQPRGFGFITYADPSVVDRVIEDTHVIN--GKQVEIKR 92
Query: 98 AEPK 101
PK
Sbjct: 93 TIPK 96
>gi|225460542|ref|XP_002277226.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Vitis vinifera]
Length = 348
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 115/262 (43%), Positives = 143/262 (54%), Gaps = 43/262 (16%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEFKDFF ++G V+EHQI+RDH T+RSRGFGFI F++E+ VD++L++GN +++A
Sbjct: 118 VTE---DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMA 174
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGD---AYGGYGGGGFAGGGFGGSGG 146
G QVE+KKAEPKK + P + S FG A G G G +G
Sbjct: 175 GTQVEIKKAEPKKAS------------NPPHVSAFGSNSRARSFSDGFGGFGSSYGSYDS 222
Query: 147 GGGGGGYRSS---GAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYG- 202
G G YR++ G+ GGYG G G +G YRG+P SLGYS R+G
Sbjct: 223 GFGAAPYRAAGGLGSRLGGYGGYGSDGGEYGGGYGSFGSSNLGGYRGDP-SLGYSSRFGP 281
Query: 203 -----GFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGSSGGA 257
+ G G YG ESYG YGGSG SGYD G G+SYGG+ G
Sbjct: 282 YGGGFSGSYGGSGLGGYGQGGESYGNYGGSGYA---------SGYDSGAGASYGGAGGLY 332
Query: 258 FFGSRGGYGGAGGSSRYHPYGR 279
G GG GSSRYHPY R
Sbjct: 333 ------GRGGYSGSSRYHPYAR 348
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F ++G++ + IM+D T + RGFGF+T+ VD ++ + + G QVE+K+
Sbjct: 35 FNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIEDTHVIN--GKQVEIKR 92
Query: 98 AEPK 101
PK
Sbjct: 93 TIPK 96
>gi|116787897|gb|ABK24684.1| unknown [Picea sitchensis]
Length = 375
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 59/113 (52%), Positives = 78/113 (69%), Gaps = 8/113 (7%)
Query: 28 TPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 87
T +TE DEFKD+F +FG V EHQIM+D ST RSRGFGFITFD+EQ V++++++G +E
Sbjct: 142 TTITE---DEFKDYFSKFGKVAEHQIMQDRSTGRSRGFGFITFDSEQVVEEIISQGKMIE 198
Query: 88 LAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGS----GFGDAYGGYGGGGF 136
L G QVE+KKAEPKKP+ +N +P Y GF D+Y G+ G G+
Sbjct: 199 LGGKQVEIKKAEPKKPSSDAGPVHGIDN-RPPYIPGGVGGFRDSYSGFEGAGY 250
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F ++G++ + IM+D T + RGFGF+T+ VD ++ +K L G VE+K+
Sbjct: 62 FTKHFSKYGELTDSVIMKDRHTGQPRGFGFVTYADASVVDKVIE--DKHILDGRTVEIKR 119
Query: 98 AEPK 101
P+
Sbjct: 120 TIPR 123
>gi|224055563|ref|XP_002298541.1| predicted protein [Populus trichocarpa]
gi|222845799|gb|EEE83346.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 53/64 (82%), Positives = 57/64 (89%), Gaps = 3/64 (4%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEF +FF QFG+V EHQIMRDHST+RSRGFGFITFDTEQAVDDLLA+GNKLELA
Sbjct: 107 VTE---DEFNEFFTQFGEVTEHQIMRDHSTNRSRGFGFITFDTEQAVDDLLARGNKLELA 163
Query: 90 GAQV 93
G QV
Sbjct: 164 GTQV 167
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E +F F ++G++ + IM+D T + RGFGF+T+ VD ++ + + G
Sbjct: 18 ETTTAQFIKHFGKYGEITDSVIMKDRKTGQPRGFGFVTYADPSVVDQVIQDTHIIN--GK 75
Query: 92 QVEVKKAEPK 101
QVE+K+ PK
Sbjct: 76 QVEIKRTIPK 85
>gi|30682553|ref|NP_683559.2| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|11994764|dbj|BAB03120.1| unnamed protein product [Arabidopsis thaliana]
gi|19347908|gb|AAL85976.1| unknown protein [Arabidopsis thaliana]
gi|21689785|gb|AAM67536.1| unknown protein [Arabidopsis thaliana]
gi|62320244|dbj|BAD94504.1| hypothetical protein [Arabidopsis thaliana]
gi|332641794|gb|AEE75315.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 358
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 50/82 (60%), Positives = 65/82 (79%), Gaps = 4/82 (4%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DE KDFF ++G+V EHQ++RDH T+RSRGFGF+ FD+E+ VD+LL+KGN +++A
Sbjct: 120 VTE---DELKDFFAKYGNVVEHQVIRDHETNRSRGFGFVIFDSEEVVDELLSKGNMIDMA 176
Query: 90 GAQVEVKKAEPKKP-NLPQPSY 110
QVE+KKAEPKK N PSY
Sbjct: 177 DTQVEIKKAEPKKSLNRSPPSY 198
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F ++G++ + IMRD T + RGFGFITF VD ++ + + G QVE+K+
Sbjct: 35 FNKHFGKYGEITDSVIMRDRHTGQPRGFGFITFADPSVVDKVIEDTHVIN--GKQVEIKR 92
Query: 98 AEPK 101
PK
Sbjct: 93 TIPK 96
>gi|296081021|emb|CBI18525.3| unnamed protein product [Vitis vinifera]
Length = 242
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 48/77 (62%), Positives = 65/77 (84%), Gaps = 3/77 (3%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEFKDFF ++G V+EHQI+RDH T+RSRGFGFI F++E+ VD++L++GN +++A
Sbjct: 118 VTE---DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMA 174
Query: 90 GAQVEVKKAEPKKPNLP 106
G QVE+KKAEPKK + P
Sbjct: 175 GTQVEIKKAEPKKASNP 191
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F ++G++ + IM+D T + RGFGF+T+ VD ++ + + G QVE+K+
Sbjct: 35 FNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIEDTHVIN--GKQVEIKR 92
Query: 98 AEPK 101
PK
Sbjct: 93 TIPK 96
>gi|255563582|ref|XP_002522793.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538031|gb|EEF39644.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 348
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 53/94 (56%), Positives = 69/94 (73%), Gaps = 11/94 (11%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEFK FF ++G V EHQI+RDH T+RSRGFGFI FD+E+ VD++L+ GN +++A
Sbjct: 118 VTE---DEFKGFFSKYGQVVEHQIIRDHETNRSRGFGFIIFDSEETVDEMLSNGNMIDMA 174
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG 123
G QVE+KKAEPKK + P P+ P+YGS
Sbjct: 175 GTQVEIKKAEPKKASNPPPA--------PSYGSN 200
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F ++G++ + IM+D T + RGFGFIT+ VD ++ + + G QVE+K+
Sbjct: 35 FNKHFGRYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIH--GKQVEIKR 92
Query: 98 AEPK 101
PK
Sbjct: 93 TIPK 96
>gi|296085054|emb|CBI28469.3| unnamed protein product [Vitis vinifera]
Length = 258
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/152 (44%), Positives = 87/152 (57%), Gaps = 23/152 (15%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 86
LT V+E DEFK+FF ++G V EH+I+ DH T RSRGFGFI FD EQ VDDLL GN +
Sbjct: 114 LTSVSE---DEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNMI 170
Query: 87 ELAGAQVEVKKAEPKKPNLPQPSYRRYNNP--KPAYG-----SGFGDAYGGYGGGGFAGG 139
++ G QVE+KKAEPKK + +NP P++G + D + GYG +
Sbjct: 171 DMEGTQVEIKKAEPKKSS---------SNPGRAPSFGGDSRMQMYNDGFSGYG----SDP 217
Query: 140 GFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGV 171
G GG G YR+ G R G YGG +
Sbjct: 218 YSGLGSGGYGPASYRALGGIDSRLGDYGGVLI 249
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E LD F +F ++G++ + +M+D T R RGFGFIT+ VD+++ + + + G
Sbjct: 28 ETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDEVIQETHIIN--GK 85
Query: 92 QVEVKKAEPK 101
QVE+K+ P+
Sbjct: 86 QVEIKRTIPR 95
>gi|307940738|gb|ADN95983.1| G-strand specific single-stranded telomere-binding protein 1
[Nicotiana tabacum]
Length = 346
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 60/124 (48%), Positives = 81/124 (65%), Gaps = 11/124 (8%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEFK FF ++G V + +I+RDH + RSRGFGFI FD E VD++L++GN +++ G QVE+
Sbjct: 117 DEFKGFFSKYGKVVDCEIIRDHVSKRSRGFGFIVFDNELVVDNVLSEGNMIDMLGTQVEI 176
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGG--GGFAGGGFGGSGGGGGGGGY 153
KKAEPKKP+ P S Y + + G G+ D+YGG+G F GGFG + Y
Sbjct: 177 KKAEPKKPSNPASSGHGYGS--ESRGRGYSDSYGGFGNSYSSFGSGGFGPA-------SY 227
Query: 154 RSSG 157
RSSG
Sbjct: 228 RSSG 231
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E L++F +F ++G++ + IM+D T R RGFGFIT+ VD ++A+ + +
Sbjct: 25 ETTLEQFVKYFEKYGEIIDSVIMKDRHTGRPRGFGFITYSDPTVVDTVIAETHIIN--DK 82
Query: 92 QVEVKKAEPK 101
QVE+K+ PK
Sbjct: 83 QVEIKRTIPK 92
>gi|225447494|ref|XP_002267309.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Vitis
vinifera]
Length = 360
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 48/76 (63%), Positives = 58/76 (76%), Gaps = 3/76 (3%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 86
LT V+E DEFK+FF ++G V EH+I+ DH T RSRGFGFI FD EQ VDDLL GN +
Sbjct: 114 LTSVSE---DEFKNFFSKYGKVVEHEIIHDHVTKRSRGFGFIVFDNEQVVDDLLTNGNMI 170
Query: 87 ELAGAQVEVKKAEPKK 102
++ G QVE+KKAEPKK
Sbjct: 171 DMEGTQVEIKKAEPKK 186
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E LD F +F ++G++ + +M+D T R RGFGFIT+ VD+++ + + + G
Sbjct: 28 ETNLDTFTKYFEKYGEITDSVVMKDRQTGRPRGFGFITYADPSVVDEVIQETHIIN--GK 85
Query: 92 QVEVKKAEPK 101
QVE+K+ P+
Sbjct: 86 QVEIKRTIPR 95
>gi|147789024|emb|CAN75779.1| hypothetical protein VITISV_012423 [Vitis vinifera]
Length = 345
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 115/274 (41%), Positives = 143/274 (52%), Gaps = 55/274 (20%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEFKDFF ++G V+EHQI+RDH T+RSRGFGFI F++E+ VD++L++GN +++A
Sbjct: 103 VTE---DEFKDFFSKYGKVEEHQIIRDHETNRSRGFGFIIFESEEVVDEILSEGNMIDMA 159
Query: 90 GAQ------------VEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGD---AYGGYGGG 134
G Q VE+KKAEPKK + P + S FG A G
Sbjct: 160 GTQVSILQWSPRNKHVEIKKAEPKKAS------------NPPHVSAFGSNSRARSFSDGF 207
Query: 135 GFAGGGFGGSGGGGGGGGYRSS---GAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGE 191
G G +G G G YR++ G+ GGYG G G +G YRG+
Sbjct: 208 GGFGSSYGSYDSGFGAAPYRAAGGLGSRLGGYGGYGSDGGEYGGGYGSFGSSNLGGYRGD 267
Query: 192 PSSLGYSGRYG------GFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIG 245
P SLGYS R+G + G G YG ESYG YGGSG SGYD G
Sbjct: 268 P-SLGYSSRFGPYGGGFSGSYGGSGLGGYGQGGESYGNYGGSGYA---------SGYDSG 317
Query: 246 LGSSYGGSSGGAFFGSRGGYGGAGGSSRYHPYGR 279
G+SYGG+ G G GG GSSRYHPY R
Sbjct: 318 AGASYGGAGGL------YGRGGYSGSSRYHPYAR 345
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F F ++G++ + IM+D T + RGFGF+T+ VD ++ + + G QVE+K+
Sbjct: 20 FNKHFEKYGEITDSVIMKDRYTGQPRGFGFVTYADPSVVDSVIEDTHVIN--GKQVEIKR 77
Query: 98 AEPK 101
PK
Sbjct: 78 TIPK 81
>gi|356547577|ref|XP_003542187.1| PREDICTED: DAZ-associated protein 1-like [Glycine max]
Length = 352
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 60/76 (78%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
T + DE K+FF ++G V EH+I+RDH+T RSRGFGFI FD+E+ VD++LA GN +++ G
Sbjct: 115 TSVSEDELKNFFSKYGKVVEHEIIRDHTTKRSRGFGFIVFDSEKVVDNILADGNMIDMGG 174
Query: 91 AQVEVKKAEPKKPNLP 106
QVE+KKAEPKK + P
Sbjct: 175 TQVEIKKAEPKKSSNP 190
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
+ L+ F +F ++G++ + IM+D T R RGFGFIT+ VD ++ + + + G
Sbjct: 28 DTTLETFVKYFEKYGEITDSVIMKDRHTGRPRGFGFITYADPSVVDQVIQENHVVN--GK 85
Query: 92 QVEVKKAEPK 101
QVE+K+ PK
Sbjct: 86 QVEIKRTIPK 95
>gi|226505238|ref|NP_001141380.1| hypothetical protein [Zea mays]
gi|194704250|gb|ACF86209.1| unknown [Zea mays]
gi|413954079|gb|AFW86728.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 345
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L D+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G
Sbjct: 134 PSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGG 193
Query: 91 AQVEVKKAEPKKP 103
QVE+KKAEPKKP
Sbjct: 194 KQVEIKKAEPKKP 206
>gi|413926094|gb|AFW66026.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 443
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L DE KD F +G+V EHQIM DHST RSRGFGFITF++E +V+ ++++G +L G
Sbjct: 212 PSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGG 271
Query: 91 AQVEVKKAEPKK 102
QVE+KKAEPKK
Sbjct: 272 KQVEIKKAEPKK 283
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 43/84 (51%), Gaps = 4/84 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 124 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVID--GR 181
Query: 92 QVEVKKAEPKKPNLPQ--PSYRRY 113
VEVK+ P++ + + P R+
Sbjct: 182 TVEVKRTVPREEMITKDGPKTRKI 205
>gi|356547342|ref|XP_003542073.1| PREDICTED: uncharacterized RNA-binding protein C660.15-like
[Glycine max]
Length = 353
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 118/249 (47%), Gaps = 43/249 (17%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DE +++F +G+V E QIM DH+T RSRGFGF+TFD E +V+ + + G E+ G QVE+
Sbjct: 143 DELREYFSPYGNVIECQIMLDHNTGRSRGFGFVTFDDEDSVEKVFSVGKIHEIGGKQVEI 202
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYRS 155
K+AEPK+ + N + +YG GFG G GG R+
Sbjct: 203 KRAEPKRSGVDYC-----NTSRKSYG------------------GFGNEMDGHGGNSSRN 239
Query: 156 SGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGGFNRGYDVTGDYG 215
+G RGG Y G G+ G +G + G GG A G
Sbjct: 240 RN-HGKRGGQYTGSGMNGAYGHFDGSFGGSAATVYGGYCGYGYEFGYG------------ 286
Query: 216 GLNESYGGYGGSGVGGGGGYGGGPSGY-DI---GLGSSYGGSSGGAFFGSRGGYGGAGGS 271
G +GGYG + G GGYG G + Y D+ G S+ GS G + S+ G G +
Sbjct: 287 GPMYCFGGYGLNSYGNPGGYGSGITSYGDVNAYGRAGSFNGS--GGYDSSKVAEKGDGPT 344
Query: 272 S-RYHPYGR 279
+ RYHPY +
Sbjct: 345 TGRYHPYWK 353
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F ++F ++G+V + IM + + R RGFGF+TF D++LA+ + ++
Sbjct: 50 ETSQESFFNYFSKYGEVTDSVIMTNKLSGRPRGFGFVTFANSAVADEVLAQEHTID--HR 107
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 108 VVEVKRTVPRE 118
>gi|413943841|gb|AFW76490.1| hypothetical protein ZEAMMB73_698498 [Zea mays]
Length = 413
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L D+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G
Sbjct: 198 PSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGG 257
Query: 91 AQVEVKKAEPKKP 103
QVE+KKAEPKKP
Sbjct: 258 KQVEIKKAEPKKP 270
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 110 ETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVID--GR 167
Query: 92 QVEVKKAEPKK 102
VEVK+ PK+
Sbjct: 168 TVEVKRTVPKE 178
>gi|226503497|ref|NP_001145761.1| uncharacterized protein LOC100279268 [Zea mays]
gi|219884331|gb|ACL52540.1| unknown [Zea mays]
Length = 413
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L D+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G
Sbjct: 198 PSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGG 257
Query: 91 AQVEVKKAEPKKP 103
QVE+KKAEPKKP
Sbjct: 258 KQVEIKKAEPKKP 270
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 110 ETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVID--GR 167
Query: 92 QVEVKKAEPKK 102
VEVK+ PK+
Sbjct: 168 TVEVKRTVPKE 178
>gi|413954077|gb|AFW86726.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 401
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L D+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G
Sbjct: 190 PSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGG 249
Query: 91 AQVEVKKAEPKKP 103
QVE+KKAEPKKP
Sbjct: 250 KQVEIKKAEPKKP 262
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 103 ETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLEDEHVID--GR 160
Query: 92 QVEVKKAEPKK 102
VEVK+ PK+
Sbjct: 161 TVEVKRTVPKE 171
>gi|357462485|ref|XP_003601524.1| RNA-binding protein [Medicago truncatula]
gi|355490572|gb|AES71775.1| RNA-binding protein [Medicago truncatula]
Length = 370
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 78/136 (57%), Gaps = 22/136 (16%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGN----------- 84
DE K FF + G+V EH+I+RDH+T RSRGFGF+ FD+++AVD+LLA GN
Sbjct: 120 DELKIFFSKHGNVVEHEIIRDHTTKRSRGFGFVVFDSDKAVDNLLADGNMIDMDDTQVSL 179
Query: 85 -------KLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKP-AYGSGFG---DAYGGYGG 133
K+E A VE+KKAEPKK + ++ + +Y GFG D+YG + G
Sbjct: 180 VRLFMVFKIETGDATVEIKKAEPKKSSNSSSFPSFGSDSRARSYNGGFGGFDDSYGSFPG 239
Query: 134 GGFAGGGFGGSGGGGG 149
GG+ + GG GG
Sbjct: 240 GGYGPASYRSLGGIGG 255
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
+ L+EF +F ++G++ + IM+D T R RGFGFIT+ VD ++ + + +
Sbjct: 28 DTTLEEFVKYFERYGEITDSVIMKDRHTGRPRGFGFITYADASVVDQVIQENHIIN--DK 85
Query: 92 QVEVKKAEPK 101
QVE+K+ PK
Sbjct: 86 QVEIKRTIPK 95
>gi|239051430|ref|NP_001131946.2| uncharacterized protein LOC100193339 [Zea mays]
gi|194695014|gb|ACF81591.1| unknown [Zea mays]
gi|223947685|gb|ACN27926.1| unknown [Zea mays]
gi|238908636|gb|ACF80580.2| unknown [Zea mays]
gi|413926096|gb|AFW66028.1| heterogeneous nuclear ribonucleoprotein A3 isoform 1 [Zea mays]
gi|413926097|gb|AFW66029.1| heterogeneous nuclear ribonucleoprotein A3 isoform 2 [Zea mays]
gi|413926098|gb|AFW66030.1| heterogeneous nuclear ribonucleoprotein A3 isoform 3 [Zea mays]
Length = 384
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L DE KD F +G+V EHQIM DHST RSRGFGFITF++E +V+ ++++G +L G
Sbjct: 153 PSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGG 212
Query: 91 AQVEVKKAEPKK 102
QVE+KKAEPKK
Sbjct: 213 KQVEIKKAEPKK 224
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 65 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVID--GR 122
Query: 92 QVEVKKAEPKKPNLPQ--PSYRR 112
VEVK+ P++ + + P R+
Sbjct: 123 TVEVKRTVPREEMITKDGPKTRK 145
>gi|413954080|gb|AFW86729.1| hypothetical protein ZEAMMB73_661369 [Zea mays]
Length = 270
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 56/73 (76%), Gaps = 2/73 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L D+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G
Sbjct: 59 PSLTEDKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGG 118
Query: 91 AQVEVKKAEPKKP 103
QVE+KKAEPKKP
Sbjct: 119 KQVEIKKAEPKKP 131
>gi|238007140|gb|ACR34605.1| unknown [Zea mays]
gi|413926095|gb|AFW66027.1| hypothetical protein ZEAMMB73_185087 [Zea mays]
Length = 366
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 43/72 (59%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L DE KD F +G+V EHQIM DHST RSRGFGFITF++E +V+ ++++G +L G
Sbjct: 135 PSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFITFESEDSVERVISEGRMRDLGG 194
Query: 91 AQVEVKKAEPKK 102
QVE+KKAEPKK
Sbjct: 195 KQVEIKKAEPKK 206
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 47 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVID--GR 104
Query: 92 QVEVKKAEPKKPNLPQ--PSYRR 112
VEVK+ P++ + + P R+
Sbjct: 105 TVEVKRTVPREEMITKDGPKTRK 127
>gi|242064522|ref|XP_002453550.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
gi|241933381|gb|EES06526.1| hypothetical protein SORBIDRAFT_04g007860 [Sorghum bicolor]
Length = 391
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 55/72 (76%), Gaps = 2/72 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L DE KD F +G V EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G
Sbjct: 154 PSLTEDELKDHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGG 213
Query: 91 AQVEVKKAEPKK 102
QVE+KKAEPKK
Sbjct: 214 KQVEIKKAEPKK 225
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 66 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVID--GR 123
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 124 TVEVKRTVPRE 134
>gi|242093370|ref|XP_002437175.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
gi|241915398|gb|EER88542.1| hypothetical protein SORBIDRAFT_10g022380 [Sorghum bicolor]
Length = 414
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 53/68 (77%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ K+ F +G V EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G QVE+
Sbjct: 202 DKLKEHFSSYGKVVEHQIMLDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEI 261
Query: 96 KKAEPKKP 103
KKAEPKKP
Sbjct: 262 KKAEPKKP 269
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 109 ETTEETFTKHFQKYGAITDSVIMKDKHTRMPRGFGFVTFSDPSVLDRVLEDAHVID--GR 166
Query: 92 QVEVKKAEPKK 102
VEVK+ PK+
Sbjct: 167 TVEVKRTVPKE 177
>gi|195628644|gb|ACG36152.1| heterogeneous nuclear ribonucleoprotein A3 [Zea mays]
Length = 384
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 56/72 (77%), Gaps = 2/72 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L DE KD F +G+V EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G
Sbjct: 153 PSLTEDELKDHFSSYGNVVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGG 212
Query: 91 AQVEVKKAEPKK 102
QVE+KKAEPKK
Sbjct: 213 KQVEIKKAEPKK 224
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 4/83 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 65 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDDHVID--GR 122
Query: 92 QVEVKKAEPKKPNLPQ--PSYRR 112
VEVK+ P++ + + P R+
Sbjct: 123 TVEVKRTVPREEMITKDGPKTRK 145
>gi|125555768|gb|EAZ01374.1| hypothetical protein OsI_23407 [Oryza sativa Indica Group]
Length = 407
Score = 90.5 bits (223), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L D+ K+ F +G V EHQIM DH T RSRGFGF+TF+ E AV+ ++++G +LAG
Sbjct: 189 PSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAG 248
Query: 91 AQVEVKKAEPKKP 103
QVE+KKAEPKKP
Sbjct: 249 KQVEIKKAEPKKP 261
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 101 ETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTID--GR 158
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 159 TVEVKRTVPRE 169
>gi|125597614|gb|EAZ37394.1| hypothetical protein OsJ_21732 [Oryza sativa Japonica Group]
Length = 344
Score = 90.5 bits (223), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L D+ K+ F +G V EHQIM DH T RSRGFGF+TF+ E AV+ ++++G +LAG
Sbjct: 126 PSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAG 185
Query: 91 AQVEVKKAEPKKP 103
QVE+KKAEPKKP
Sbjct: 186 KQVEIKKAEPKKP 198
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 38 ETTEESFTKHFEKYGAISDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTID--GR 95
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 96 TVEVKRTVPRE 106
>gi|357124087|ref|XP_003563738.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 2 [Brachypodium distachyon]
Length = 354
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ K+ F +G V+EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G QVE+K
Sbjct: 131 KLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIK 190
Query: 97 KAEPKKP 103
+AEPKKP
Sbjct: 191 RAEPKKP 197
>gi|297606021|ref|NP_001057893.2| Os06g0566100 [Oryza sativa Japonica Group]
gi|53793272|dbj|BAD54495.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|53793315|dbj|BAD54536.1| putative Heterogeneous nuclear ribonucleoproteins A1 homolog [Oryza
sativa Japonica Group]
gi|215765227|dbj|BAG86924.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255677149|dbj|BAF19807.2| Os06g0566100 [Oryza sativa Japonica Group]
Length = 285
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/73 (57%), Positives = 55/73 (75%), Gaps = 2/73 (2%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L D+ K+ F +G V EHQIM DH T RSRGFGF+TF+ E AV+ ++++G +LAG
Sbjct: 67 PSLTEDKLKEHFSSYGKVVEHQIMLDHGTGRSRGFGFVTFENEDAVERVMSEGRMHDLAG 126
Query: 91 AQVEVKKAEPKKP 103
QVE+KKAEPKKP
Sbjct: 127 KQVEIKKAEPKKP 139
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 54 MRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
M+D T RGFGF+TF +D +L + ++ G VEVK+ P++
Sbjct: 1 MKDKHTKMPRGFGFVTFSDPSVIDKVLQDEHTID--GRTVEVKRTVPRE 47
>gi|15220810|ref|NP_173208.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332191496|gb|AEE29617.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 369
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 13 INRQTTTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 72
I + T+K+ L P+ E DE K++F +GD+ EHQIM DH T RSRGFGF+TF T
Sbjct: 150 IKAVSKTRKIFVGGLPPLLEE--DELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQT 207
Query: 73 EQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
E +VD L + G EL QVE+K+AEPK+
Sbjct: 208 EDSVDRLFSDGKVHELGDKQVEIKRAEPKR 237
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F ++F +FG+V + IM D T RGFGF+TF + +L + + ++
Sbjct: 76 ETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVID--DR 133
Query: 92 QVEVKKAEPK 101
+V++K+ P+
Sbjct: 134 KVDLKRTLPR 143
>gi|293336544|ref|NP_001168743.1| uncharacterized protein LOC100382538 [Zea mays]
gi|223972773|gb|ACN30574.1| unknown [Zea mays]
gi|413936749|gb|AFW71300.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
gi|413936750|gb|AFW71301.1| hypothetical protein ZEAMMB73_007301 [Zea mays]
Length = 384
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 52/67 (77%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DE KD F +G V EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G QVE+
Sbjct: 158 DELKDHFSLYGKVLEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI 217
Query: 96 KKAEPKK 102
KKAEPKK
Sbjct: 218 KKAEPKK 224
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 65 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVID--GR 122
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 123 TVEVKRTVPRE 133
>gi|8778468|gb|AAF79476.1|AC022492_20 F1L3.34 [Arabidopsis thaliana]
Length = 392
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/90 (50%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 13 INRQTTTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 72
I + T+K+ L P+ E DE K++F +GD+ EHQIM DH T RSRGFGF+TF T
Sbjct: 173 IKAVSKTRKIFVGGLPPLLEE--DELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQT 230
Query: 73 EQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
E +VD L + G EL QVE+K+AEPK+
Sbjct: 231 EDSVDRLFSDGKVHELGDKQVEIKRAEPKR 260
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F ++F +FG+V + IM D T RGFGF+TF + +L + + ++
Sbjct: 99 ETTAETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEDHVID--DR 156
Query: 92 QVEVKKAEPK 101
+V++K+ P+
Sbjct: 157 KVDLKRTLPR 166
>gi|357124085|ref|XP_003563737.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like isoform 1 [Brachypodium distachyon]
Length = 410
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ K+ F +G V+EHQIM DHST RSRGFGF+TF++E AV+ ++++G +L G QVE+K
Sbjct: 187 KLKEHFSSYGKVEEHQIMVDHSTGRSRGFGFVTFESEDAVERVMSEGRMHDLGGKQVEIK 246
Query: 97 KAEPKKP 103
+AEPKKP
Sbjct: 247 RAEPKKP 253
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 93 ETTEETFSKHFQKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDRVLEDEHTID--GR 150
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 151 TVEVKRTVPRE 161
>gi|357140379|ref|XP_003571746.1| PREDICTED: uncharacterized protein LOC100831046 isoform 1
[Brachypodium distachyon]
Length = 403
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ +D F +G V EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G QVE+
Sbjct: 168 DDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI 227
Query: 96 KKAEPKK 102
KKAEPKK
Sbjct: 228 KKAEPKK 234
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 75 ETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNID--GR 132
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 133 TVEVKRTVPRE 143
>gi|326531676|dbj|BAJ97842.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ +D F +G+V EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G QVE+
Sbjct: 165 DDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI 224
Query: 96 KKAEPKK 102
KKAEPKK
Sbjct: 225 KKAEPKK 231
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 72 ETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNID--GR 129
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 130 TVEVKRTVPRE 140
>gi|326487243|dbj|BAJ89606.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326506666|dbj|BAJ91374.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ +D F +G+V EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G QVE+
Sbjct: 165 DDLRDHFSSYGNVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI 224
Query: 96 KKAEPKK 102
KKAEPKK
Sbjct: 225 KKAEPKK 231
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 72 ETTEESFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNID--GR 129
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 130 TVEVKRTVPRE 140
>gi|125538654|gb|EAY85049.1| hypothetical protein OsI_06408 [Oryza sativa Indica Group]
Length = 504
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DE ++ F +G + EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G QVE+
Sbjct: 275 DELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI 334
Query: 96 KKAEPKK 102
KKAEPKK
Sbjct: 335 KKAEPKK 341
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 29/56 (51%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 87
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++
Sbjct: 185 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVID 240
>gi|222622445|gb|EEE56577.1| hypothetical protein OsJ_05928 [Oryza sativa Japonica Group]
Length = 510
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DE ++ F +G + EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G QVE+
Sbjct: 282 DELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI 341
Query: 96 KKAEPKK 102
KKAEPKK
Sbjct: 342 KKAEPKK 348
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 189 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVID--GR 246
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 247 TVEVKRTVPRE 257
>gi|357140381|ref|XP_003571747.1| PREDICTED: uncharacterized protein LOC100831046 isoform 2
[Brachypodium distachyon]
Length = 383
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 52/67 (77%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ +D F +G V EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G QVE+
Sbjct: 148 DDLRDHFSSYGKVVEHQIMVDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI 207
Query: 96 KKAEPKK 102
KKAEPKK
Sbjct: 208 KKAEPKK 214
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 55 ETTEETFSKHFGKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHNID--GR 112
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 113 TVEVKRTVPRE 123
>gi|449463368|ref|XP_004149406.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
gi|449496860|ref|XP_004160246.1| PREDICTED: nuclear polyadenylated RNA-binding protein 4-like
[Cucumis sativus]
Length = 347
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 69/94 (73%), Gaps = 11/94 (11%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE DEFK FF ++G + EHQI+RDH T+RSRGFGFI F+ E+ VD++L+KGN ++++
Sbjct: 118 VTE---DEFKHFFSKYGKIVEHQIIRDHETNRSRGFGFIVFEEEEVVDEILSKGNMIDMS 174
Query: 90 GAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSG 123
G QVE+KKAEPKK + P P+ PAYGS
Sbjct: 175 GTQVEIKKAEPKKSSNPLPA--------PAYGSN 200
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 2/65 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+F F +G++ + IM+D T + RGFGFIT+ VD ++ + + G QVE+K
Sbjct: 34 QFNKHFGNYGEITDSVIMKDRYTGQPRGFGFITYADPSVVDKVIEDTHVIN--GKQVEIK 91
Query: 97 KAEPK 101
+ PK
Sbjct: 92 RTIPK 96
>gi|449447863|ref|XP_004141686.1| PREDICTED: uncharacterized protein LOC101220676 [Cucumis sativus]
gi|449525968|ref|XP_004169988.1| PREDICTED: uncharacterized LOC101220676 [Cucumis sativus]
Length = 700
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 92/171 (53%), Gaps = 26/171 (15%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+EFKD+F FG + EHQIM D+ T RSRGFGFITF+ E +V+++ + EL G QVE+
Sbjct: 526 EEFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVENIFSGDRIHELGGKQVEI 585
Query: 96 KKAEPKK------PNLPQPS----YR---RYNNPKPAYGSGFG--DAYGGYGGGGFAGGG 140
KKA PK+ N Q S YR Y++ G+ FG D Y YGG G
Sbjct: 586 KKAVPKRVAYDFNSNSGQTSGYDMYRCGGLYDD---IIGTDFGPYDLYAPYGGFGVNYAS 642
Query: 141 FGGS--GGGGGGGGYRSSGAYGVRGGGYG----GYGVGGEFGGYGGYGGGM 185
F G+ G G G +G YG+ GYG GYG+ G GY G GG M
Sbjct: 643 FYGAYNYGFGYGASMYMNGRYGM--NGYGTPSVGYGINGYGKGYEGNGGSM 691
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D F+D+F ++G++ + IM D T R RGFGF+TF + A+ D++ K + + + G
Sbjct: 433 ETTEDTFRDYFSKYGEIADSVIMIDKHTGRPRGFGFVTF-CDPAIADMVLKIDHI-IDGR 490
Query: 92 QVEVKKAEPK 101
VEVK+ P+
Sbjct: 491 AVEVKRTVPR 500
>gi|115445085|ref|NP_001046322.1| Os02g0221500 [Oryza sativa Japonica Group]
gi|46806500|dbj|BAD17624.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806519|dbj|BAD17632.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|113535853|dbj|BAF08236.1| Os02g0221500 [Oryza sativa Japonica Group]
Length = 397
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DE ++ F +G + EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G QVE+
Sbjct: 169 DELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI 228
Query: 96 KKAEPKK 102
KKAEPKK
Sbjct: 229 KKAEPKK 235
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 76 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVID--GR 133
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 134 TVEVKRTVPRE 144
>gi|46806499|dbj|BAD17623.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
gi|46806518|dbj|BAD17631.1| putative heterogeneous nuclearribonucleoprotein A2 [Oryza sativa
Japonica Group]
Length = 374
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DE ++ F +G + EHQIM DHST RSRGFGF+TF++E +V+ ++++G +L G QVE+
Sbjct: 169 DELREHFSPYGKIVEHQIMLDHSTGRSRGFGFVTFESEDSVERVISEGRMRDLGGKQVEI 228
Query: 96 KKAEPKK 102
KKAEPKK
Sbjct: 229 KKAEPKK 235
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F F ++G + + IM+D T RGFGF+TF +D +L + ++ G
Sbjct: 76 ETTEESFSKHFEKYGAITDSVIMKDKHTKMPRGFGFVTFSDPSVIDKVLEDEHVID--GR 133
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 134 TVEVKRTVPRE 144
>gi|307136289|gb|ADN34116.1| heterogeneous nuclear ribonucleoprotein a1 [Cucumis melo subsp.
melo]
Length = 699
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 48/66 (72%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
EFKD+F FG + EHQIM D+ T RSRGFGFITF+ E +VD++ + EL G QVE+K
Sbjct: 525 EFKDYFSSFGRIIEHQIMIDYKTKRSRGFGFITFENEDSVDNIFSGDRIHELGGKQVEIK 584
Query: 97 KAEPKK 102
KA PKK
Sbjct: 585 KAVPKK 590
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D F D+F ++G++ + IM D T R RGFGF+TF + A+ D++ K + + + G
Sbjct: 431 ETTEDTFSDYFSKYGEIADSVIMIDKHTGRPRGFGFVTF-CDPAIADMVLKIDHI-IDGR 488
Query: 92 QVEVKKAEPK 101
VEVK+ P+
Sbjct: 489 AVEVKRTVPR 498
>gi|255560757|ref|XP_002521392.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223539470|gb|EEF41060.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 412
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 50/113 (44%), Positives = 70/113 (61%), Gaps = 9/113 (7%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L DE ++F +G++ EHQIM DH T RSRGFGF+TF+TE +V+ + + G EL G
Sbjct: 177 PTLTEDELGEYFSVYGNIVEHQIMLDHKTGRSRGFGFVTFETEDSVEQIFSTGRTHELGG 236
Query: 91 AQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGG 143
+VE+KKA PK+ S +Y+ +GF + GGYG G +GG +GG
Sbjct: 237 KRVEIKKAVPKRNGGDYGSSGKYH-------TGFSNGAGGYGAGHNSGGLYGG 282
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F +F +FG++ + IMRD + R RGFGF+TF A D +L + + ++
Sbjct: 89 ETTEETFTSYFSKFGEITDSVIMRDRHSGRPRGFGFVTFADLAAADRVLEEDHIID--DR 146
Query: 92 QVEVKKAEPKK 102
VEVK+ P++
Sbjct: 147 AVEVKRTVPRE 157
>gi|297743097|emb|CBI35964.3| unnamed protein product [Vitis vinifera]
Length = 353
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DE KD+F +G + E+QIM DH T RSRGFGF+TF +E AV+ L ++G EL G VE+
Sbjct: 154 DELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEI 213
Query: 96 KKAEPKK 102
KKAEPK+
Sbjct: 214 KKAEPKR 220
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F ++F +G++ + IM D T R RGFGFITF D +L + + ++ G
Sbjct: 61 ETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEEDHVID--GR 118
Query: 92 QVEVKKAEPKK 102
VEVKK P++
Sbjct: 119 AVEVKKTVPRE 129
>gi|359482522|ref|XP_002276110.2| PREDICTED: nucleolin-like [Vitis vinifera]
Length = 501
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 49/67 (73%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DE KD+F +G + E+QIM DH T RSRGFGF+TF +E AV+ L ++G EL G VE+
Sbjct: 302 DELKDYFSSYGAIVENQIMLDHVTGRSRGFGFVTFVSEDAVERLFSEGKTHELGGKLVEI 361
Query: 96 KKAEPKK 102
KKAEPK+
Sbjct: 362 KKAEPKR 368
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F ++F +G++ + IM D T R RGFGFITF D +L + + ++ G
Sbjct: 209 ETSEEIFTNYFSNYGEITDSVIMMDRHTGRPRGFGFITFADPAVADKVLEEDHVID--GR 266
Query: 92 QVEVKKAEPKK 102
VEVKK P++
Sbjct: 267 AVEVKKTVPRE 277
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 62/150 (41%), Positives = 79/150 (52%), Gaps = 27/150 (18%)
Query: 16 QTTTQKMTGLSLTP-VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQ 74
Q T+K+ L P VTE ++F+ +F QFG + + +M DHST R RGFGFIT+D+E
Sbjct: 102 QVRTKKIFVGGLAPTVTE---NDFRKYFEQFGTITDVVVMYDHSTQRPRGFGFITYDSED 158
Query: 75 AVDDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGG 134
AVD +L K +L G VEVK+A PK+ +P PA GG+G
Sbjct: 159 AVDQVLQK-TFHDLNGKMVEVKRAVPKEL-----------SPSPAR-----TPIGGFGVA 201
Query: 135 GFAGGGFGGSGGGGGGGGYRSSGA--YGVR 162
G G F G G GY SS A YGVR
Sbjct: 202 GNRGNNF----NIGYGQGYNSSPAVGYGVR 227
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D KD+F +FG+V E IM+D +T R+RGFGF+ F D ++ +K + G
Sbjct: 16 ETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFADPAIADRVVL--DKHTIDGR 73
Query: 92 QVEVKKAEPK 101
VE KKA P+
Sbjct: 74 TVEAKKAIPR 83
>gi|414869241|tpg|DAA47798.1| TPA: hypothetical protein ZEAMMB73_787929 [Zea mays]
Length = 235
Score = 80.9 bits (198), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 89/175 (50%), Gaps = 31/175 (17%)
Query: 18 TTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD 77
T + + G + +TE D+ K FF ++G + +HQIM DH T RSRGFGFI F ++
Sbjct: 10 TKKIIVGELPSTLTE---DDVKSFFARYGTMVDHQIMFDHETKRSRGFGFIVFASD---- 62
Query: 78 DLLAKGNKLELAGAQVEVKKAEPKK-PNLPQPSYRRYNNPKPAYGSGFGD--AYGGYGGG 134
++VE+KKAEPKK N P P N + AY SG D + YGG
Sbjct: 63 -------------SKVEIKKAEPKKSSNAPPPPPLYGRNARLAYDSGSRDHPSANNYGGM 109
Query: 135 GFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGG-YGGYGGGMGAY 188
A + GGG G YRS +G R G YGG G+FG YG Y G+G Y
Sbjct: 110 PNAYANY----RGGGFGPYRSDTGFGGRLGNYGG---TGDFGSTYGRYYAGLGGY 157
>gi|449468578|ref|XP_004151998.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
gi|449509419|ref|XP_004163583.1| PREDICTED: DAZ-associated protein 1-like [Cucumis sativus]
Length = 436
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/157 (40%), Positives = 72/157 (45%), Gaps = 23/157 (14%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D F+ +F +G V + IM D +T R RGFGFITFD E AVD +L K EL G VEV
Sbjct: 124 DGFRQYFESYGQVTDVVIMYDQNTQRPRGFGFITFDNEDAVDRVLYKSFH-ELNGKLVEV 182
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGG------- 148
K+A PK N GSG Y YG G F G G
Sbjct: 183 KRALPKDANP---------------GSGGRAGYQNYGASGTNSNSFDGRSDGNRYMQPQS 227
Query: 149 GGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGM 185
GG+ Y V G GYGG G +G YG YG GM
Sbjct: 228 TAGGFPPYSGYSVSGYGYGGPNSGVPYGSYGSYGVGM 264
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/63 (42%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ +D+F QFG+V + IMRD +T R RGFGF+ F +D +L +K + G QVE
Sbjct: 20 EKLRDYFSQFGEVIQAVIMRDKTTGRPRGFGFVVFSDPSLLDQVLQ--DKHTIDGRQVEA 77
Query: 96 KKA 98
K+A
Sbjct: 78 KRA 80
>gi|224129106|ref|XP_002320502.1| predicted protein [Populus trichocarpa]
gi|222861275|gb|EEE98817.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 60/86 (69%), Gaps = 6/86 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE ++FK++F QFG + + +M DH+T R RGFGFITFD+E+AVD +L +
Sbjct: 113 GLAST-VTE---NDFKNYFDQFGTIIDVVVMYDHNTQRPRGFGFITFDSEEAVDKVLMRT 168
Query: 84 NKLELAGAQVEVKKAEPKKPNLPQPS 109
EL G VEVK+A PK+ + P PS
Sbjct: 169 FH-ELNGKMVEVKRAVPKELS-PGPS 192
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K +F FG+V E IM+D +T R+RGFGF+ F + AV + + K K + G VE
Sbjct: 20 ERLKGYFRSFGEVVEAVIMKDRTTGRARGFGFVVF-ADPAVAERVIK-EKHSIDGRMVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|255576302|ref|XP_002529044.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223531524|gb|EEF33355.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 478
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 65/108 (60%), Gaps = 13/108 (12%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++FK +F QFG++ + +M DH+T R RGFGFIT+D+E AVD +L K EL G VEV
Sbjct: 120 NDFKKYFEQFGNITDVVVMYDHNTQRPRGFGFITYDSEDAVDRVLHKTFH-ELNGKMVEV 178
Query: 96 KKAEPKKPNLPQPS----------YRRYNNPKPAYGSGFG-DAYGGYG 132
K+A PK+ + P PS R NN AY G+ ++ GG+G
Sbjct: 179 KRAVPKELS-PGPSRSPLIGYNYGLSRTNNFLNAYAQGYNMNSVGGFG 225
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F ++G+V E IMRD +T R+RGFGF+ F + ++ +K + G VE
Sbjct: 20 ERLKEYFSKYGEVVEAVIMRDRTTGRARGFGFVVFADPAVAERVIV--DKHMIDGRTVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|297850158|ref|XP_002892960.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
gi|297338802|gb|EFH69219.1| hypothetical protein ARALYDRAFT_335030 [Arabidopsis lyrata subsp.
lyrata]
Length = 354
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 10/90 (11%)
Query: 13 INRQTTTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT 72
I + T+K+ L P+ E DE K++F +GD+ EHQIM DH T RSRGFGF+TF T
Sbjct: 143 IKAVSKTRKIFVGGLPPLLEE--DELKNYFCVYGDIIEHQIMYDHHTGRSRGFGFVTFQT 200
Query: 73 EQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
E +VD L + A+V++K+AEPK+
Sbjct: 201 EDSVDRL--------FSDAKVDIKRAEPKR 222
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + F ++F +FG+V + IM D T RGFGF+TF + +L + + ++
Sbjct: 69 ETTEETFANYFGKFGEVVDSVIMTDRITGNPRGFGFVTFADSAVAEKVLEEEHVID--DR 126
Query: 92 QVEVKKAEPK 101
+V++K+ P+
Sbjct: 127 KVDLKRTVPR 136
>gi|297829340|ref|XP_002882552.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
gi|297328392|gb|EFH58811.1| hypothetical protein ARALYDRAFT_478119 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/174 (39%), Positives = 86/174 (49%), Gaps = 22/174 (12%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE +FK +F QFG + +M DH+T R RGFGFIT+D+E+AV+ +L K EL
Sbjct: 119 VTE---SDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFH-ELN 174
Query: 90 GAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAYGSGFGD-AYGGYG---GG 134
G VEVK+A PK+ + P PS R NN Y GF A GGYG G
Sbjct: 175 GKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNILNGYAQGFNPAAVGGYGLRMDG 233
Query: 135 GFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAY 188
F+ G G SG GY + + G G+ G F G YG GM Y
Sbjct: 234 RFSPVGAGRSGFANFSSGYGMNVNF--EQGLPTGFTGGTNFNGNVDYGRGMSPY 285
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++ K + G VE
Sbjct: 20 ERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT-EKHNIDGRLVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|356501721|ref|XP_003519672.1| PREDICTED: uncharacterized protein LOC100799330 [Glycine max]
Length = 475
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +FK +F QFG + + +M DH+T R RGFGFIT+D+E+AVD +L K
Sbjct: 112 GLAST-VTE---SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKT 167
Query: 84 NKLELAGAQVEVKKAEPKKPNLPQPS 109
EL G VEVK+A PK+ + P PS
Sbjct: 168 FH-ELNGKMVEVKRAVPKELS-PGPS 191
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ +++F +G+V E IM+D +T R+RGFGF+ F ++ AV +++ K K + G VE
Sbjct: 20 ERLREYFCTYGEVVEAVIMKDRTTGRARGFGFVVF-SDPAVAEIVIK-EKHNIDGRMVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|357521485|ref|XP_003631031.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355525053|gb|AET05507.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 476
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +FK +F QFG + + +M DH+T R RGFGFIT+D+E+AVD +L K
Sbjct: 95 GLAST-VTE---SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKT 150
Query: 84 NKLELAGAQVEVKKAEPKK 102
EL G VEVK+A PK+
Sbjct: 151 FH-ELNGKMVEVKRAVPKE 168
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D +++F +G+V+E IM+D +T R+RGFGF+ F + AV D++ + K + G VE
Sbjct: 3 DGLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVF-IDPAVADIVVQ-EKHNIDGRMVEA 60
Query: 96 KKAEPK 101
KKA P+
Sbjct: 61 KKAVPR 66
>gi|357495375|ref|XP_003617976.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
gi|355519311|gb|AET00935.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Medicago truncatula]
Length = 479
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/79 (51%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +FK +F QFG + + +M DH+T R RGFGFIT+D+E+AVD +L K
Sbjct: 112 GLAST-VTE---SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDQVLLKT 167
Query: 84 NKLELAGAQVEVKKAEPKK 102
EL G VEVK+A PK+
Sbjct: 168 FH-ELNGKMVEVKRAVPKE 185
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ +++F +G+V+E IM+D +T R+RGFGF+ F + AV D++ + K + G VE
Sbjct: 20 ERLREYFSTYGEVKEAVIMKDRTTGRARGFGFVVF-IDPAVADIVVQ-EKHNIDGRMVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|356552729|ref|XP_003544715.1| PREDICTED: uncharacterized protein LOC100788515 [Glycine max]
Length = 478
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/183 (38%), Positives = 91/183 (49%), Gaps = 31/183 (16%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+FK +F QFG + + +M DH+T R RGFGFIT+D+E+AVD +L K EL G VEVK
Sbjct: 121 DFKKYFDQFGTIADVVVMYDHNTQRPRGFGFITYDSEEAVDRVLYKTFH-ELNGKMVEVK 179
Query: 97 KAEPKKPNLPQPSYRRYNNPKPAYG------SGFGDAYGGYGGGGFAGGGFGGSGGGGGG 150
+A PK+ + P P+ +P Y SGF ++Y GF GG G G
Sbjct: 180 RAVPKELS-PGPT----RSPLIGYNYGLNRTSGFLNSY----AQGFNMNPIGGYGVRMDG 230
Query: 151 GGYRSSGAYGVRGG----GYGGYGVG--------GEFGGYGGYGGGMGAYRGEPSSLGYS 198
R S R G G GYG+G +GG YGG +G R P + G S
Sbjct: 231 ---RFSPLTSARSGFSPFGSSGYGMGVNLDLGLNPSYGGTSSYGGSLGYARMSPFNNGNS 287
Query: 199 GRY 201
RY
Sbjct: 288 NRY 290
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F ++G+V E IMRD +T R+RGFGF+ F A + ++ +K + G VE
Sbjct: 20 ERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIM--DKHIIDGRTVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|296084992|emb|CBI28407.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 84/244 (34%), Positives = 109/244 (44%), Gaps = 34/244 (13%)
Query: 28 TPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 87
+ VTE +FK +F QFG + + +M DH+T R RGFGFIT+++E+AVD +L K E
Sbjct: 115 STVTE---SDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFH-E 170
Query: 88 LAGAQVEVKKAEPKKPNLPQPS----------YRRYNNPKPAYGSGFG-DAYGGYGGGGF 136
L G VEVK+A PK+ + P P R N+ AY G+ GGYG
Sbjct: 171 LNGKMVEVKRAVPKELS-PGPIRSQLGGFNYGLSRVNSFLSAYNQGYAPSTVGGYGVR-- 227
Query: 137 AGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMG--------AY 188
G F S GG + ++ YG RG G F GY GG G A
Sbjct: 228 MDGRFSLSQSYGGSANFNNNLNYG-RGLNPYYIGNTNRFNSTIGYDGGNGGNSSFFSSAT 286
Query: 189 RGEPSSLGYSGRYGGFNRGYDVTGDYGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGS 248
R + G SG G + ++ GG YG G+ V Y SGYD L
Sbjct: 287 RNLWGAFGNSGTSWGSSL---ISAQVGG----YGRNSGTSVAPTSSYAASNSGYDGALAE 339
Query: 249 SYGG 252
Y G
Sbjct: 340 FYSG 343
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D KD+F +G+V E IM+D +T R+RGFGF+ F + AV + + K K + G VE
Sbjct: 20 DRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVF-ADPAVAERVIK-EKHNIDGRMVEA 77
Query: 96 KKAEPK 101
KKA PK
Sbjct: 78 KKAVPK 83
>gi|449444504|ref|XP_004140014.1| PREDICTED: uncharacterized protein LOC101222391 [Cucumis sativus]
gi|449505107|ref|XP_004162378.1| PREDICTED: uncharacterized protein LOC101227668 [Cucumis sativus]
Length = 476
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 59/86 (68%), Gaps = 6/86 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE EFK++F QFG + + +M DH+T R RGFGFIT+D+E+AV+ +L K
Sbjct: 112 GLAST-VTE---SEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKT 167
Query: 84 NKLELAGAQVEVKKAEPKKPNLPQPS 109
EL G VEVK+A PK+ + P PS
Sbjct: 168 FH-ELNGKMVEVKRAVPKELS-PGPS 191
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D K++F +GDV E IM+D +T R RGFGFI F D ++ + K + G VE
Sbjct: 20 DRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIRE--KHNIDGRMVEA 77
Query: 96 KKAEPKK 102
K+A P+
Sbjct: 78 KRAVPRN 84
>gi|356551592|ref|XP_003544158.1| PREDICTED: uncharacterized protein LOC100795907 [Glycine max]
Length = 479
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/86 (51%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +FK +F QFG + + +M DH+T R RGFGFIT+D+E+AVD +L K
Sbjct: 112 GLAST-VTE---SDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLLKT 167
Query: 84 NKLELAGAQVEVKKAEPKKPNLPQPS 109
EL G VEVK+A PK+ + P PS
Sbjct: 168 FH-ELNGKMVEVKRAVPKELS-PGPS 191
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ +++F +G+V E IM+D +T R+RGFGF+ F ++ A+ +++ K K + G VE
Sbjct: 20 ERLREYFSTYGEVVEAVIMKDRTTGRARGFGFVVF-SDPAIAEIVIK-EKHNIDGRMVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|148907387|gb|ABR16827.1| unknown [Picea sitchensis]
Length = 432
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/133 (41%), Positives = 72/133 (54%), Gaps = 22/133 (16%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE D+FK +F QFG + + +M DH + R RGFGFITFD+E+AVD ++ K
Sbjct: 110 GLAPT-VTE---DDFKGYFEQFGTITDVVVMYDHISQRPRGFGFITFDSEEAVDKVVMK- 164
Query: 84 NKLELAGAQVEVKKAEPKK-----------PNLP--QPSYRRYNNPKPAYGSG----FGD 126
N EL VEVK+A PK+ P P P RY P+P G G +G
Sbjct: 165 NFHELHDKTVEVKRALPKEMSPGSARARSSPAGPYGNPQNSRYGAPQPPAGRGGYPPYGA 224
Query: 127 AYGGYGGGGFAGG 139
G + GG+ G
Sbjct: 225 VQGYFPAGGYVTG 237
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + K++F +GDV E IMRD T R+RGFGFI F AVD +L +K + G
Sbjct: 16 ETTEETLKEYFKVYGDVVETVIMRDKMTGRARGFGFIGFSEPTAVDRVLQ--DKHTIDGR 73
Query: 92 QVEVKKAEPKK 102
QVE+K+A P++
Sbjct: 74 QVELKRAVPRE 84
>gi|18398061|ref|NP_566321.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|16930693|gb|AAL32012.1|AF436830_1 AT3g07810/F17A17_15 [Arabidopsis thaliana]
gi|23297627|gb|AAN12995.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|332641085|gb|AEE74606.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 494
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 17/115 (14%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE +FK +F QFG + +M DH+T R RGFGFIT+D+E+AV+ +L K EL
Sbjct: 119 VTE---SDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFH-ELN 174
Query: 90 GAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAYGSGFGD-AYGGYG 132
G VEVK+A PK+ + P PS R NN Y GF A GGYG
Sbjct: 175 GKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYG 228
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++ K + G VE
Sbjct: 20 ERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT-EKHNIDGRLVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|6648193|gb|AAF21191.1|AC013483_15 putative RNA-binding protein [Arabidopsis thaliana]
Length = 492
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 17/115 (14%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE +FK +F QFG + +M DH+T R RGFGFIT+D+E+AV+ +L K EL
Sbjct: 119 VTE---SDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFH-ELN 174
Query: 90 GAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAYGSGFGD-AYGGYG 132
G VEVK+A PK+ + P PS R NN Y GF A GGYG
Sbjct: 175 GKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYG 228
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++ K + G VE
Sbjct: 20 ERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT-EKHNIDGRLVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|15292697|gb|AAK92717.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 494
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 17/115 (14%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE +FK +F QFG + +M DH+T R RGFGFIT+D+E+AV+ +L K EL
Sbjct: 119 VTE---SDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFH-ELN 174
Query: 90 GAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAYGSGFGD-AYGGYG 132
G VEVK+A PK+ + P PS R NN Y GF A GGYG
Sbjct: 175 GKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYG 228
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++ K + G VE
Sbjct: 20 ERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT-EKHNIDGRLVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|30680456|ref|NP_850539.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332641086|gb|AEE74607.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 495
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 64/115 (55%), Gaps = 17/115 (14%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE +FK +F QFG + +M DH+T R RGFGFIT+D+E+AV+ +L K EL
Sbjct: 119 VTE---SDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFH-ELN 174
Query: 90 GAQVEVKKAEPKKPNLPQPS-----------YRRYNNPKPAYGSGFGD-AYGGYG 132
G VEVK+A PK+ + P PS R NN Y GF A GGYG
Sbjct: 175 GKMVEVKRAVPKELS-PGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYG 228
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F FG+V E I++D +T R+RGFGF+ F + AV +++ K + G VE
Sbjct: 20 ERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVF-ADPAVAEIVIT-EKHNIDGRLVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|224114443|ref|XP_002316761.1| predicted protein [Populus trichocarpa]
gi|222859826|gb|EEE97373.1| predicted protein [Populus trichocarpa]
Length = 478
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/80 (51%), Positives = 55/80 (68%), Gaps = 5/80 (6%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
VTE +EFK +F Q+G + + +M DH+T R RGFGFIT+D+E+AVD +L K EL
Sbjct: 117 VTE---NEFKKYFEQYGIIIDVVVMYDHNTQRPRGFGFITYDSEEAVDRVLHKTFH-ELN 172
Query: 90 GAQVEVKKAEPKKPNLPQPS 109
G VEVK+A PK+ + P PS
Sbjct: 173 GKMVEVKRAVPKELS-PGPS 191
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F ++G+V E IMRD +T R+RGFGF+ F + ++ + + ++ G VE
Sbjct: 20 ERLKEYFSKYGEVVEAVIMRDRATGRARGFGFVVFADLTVAERVIMEKHVID--GRTVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|357459939|ref|XP_003600251.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
gi|355489299|gb|AES70502.1| Heterogeneous nuclear ribonucleoprotein A1 [Medicago truncatula]
Length = 481
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/101 (43%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 13 INRQT-----------TTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSR 61
INRQT T + G + +TE +FK +F QFG + + +M DH+T R
Sbjct: 89 INRQTGSVQGSPGPGRTKKIFVGGLPSTITE---SDFKMYFDQFGTITDVVVMYDHNTQR 145
Query: 62 SRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
RGFGFIT+D+E+AVD +L K EL G VEVK+A PK+
Sbjct: 146 PRGFGFITYDSEEAVDRVLYKTFH-ELNGKMVEVKRAVPKE 185
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F +G+V E IMRD +T R+RGFGF+ F + ++ +K + G VE
Sbjct: 20 ERLKEYFATYGEVIEAVIMRDRATGRARGFGFVVFSDPAVAERVII--DKHIIDGRTVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|255582445|ref|XP_002532010.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223528341|gb|EEF30383.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 484
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 58/86 (67%), Gaps = 6/86 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +F+ +F Q+G + + +M DH+T R RGFGFIT+D+E+AVD +L K
Sbjct: 113 GLAST-VTET---DFRKYFEQYGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKT 168
Query: 84 NKLELAGAQVEVKKAEPKKPNLPQPS 109
EL G VEVK+A PK+ + P PS
Sbjct: 169 FH-ELNGKMVEVKRAVPKELS-PGPS 192
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F FG+V E IM+D +T R+RGFGF+ F + ++ + K + G VE
Sbjct: 20 ERLKEYFGSFGEVVEAVIMKDRTTGRARGFGFVVFADAAVAERVIME--KHNIDGRMVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%), Gaps = 5/78 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE D+F+ +F QFG++ + +M DH+T R RGFGFIT+D+E AVD +L +
Sbjct: 107 GLAPT-VTE---DDFRKYFEQFGNITDVVVMYDHTTQRHRGFGFITYDSEDAVDKVLQQ- 161
Query: 84 NKLELAGAQVEVKKAEPK 101
+L VEVK+A PK
Sbjct: 162 TFHQLKEKTVEVKRAIPK 179
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D KD+F +G V + IM+D +T R+RGFGF+ F D ++ + + ++ G VE
Sbjct: 20 DRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADRVIQEKHTID--GRAVEA 77
Query: 96 KKAEPK 101
K+ P+
Sbjct: 78 KRVVPR 83
>gi|326489793|dbj|BAK01877.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 463
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/88 (50%), Positives = 57/88 (64%), Gaps = 6/88 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +F+ +F QFG + + +M DH+T R RGFGFIT+D+E AVD L K
Sbjct: 112 GLAST-VTEA---DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 167
Query: 84 NKLELAGAQVEVKKAEPKKPNLPQPSYR 111
EL G VEVK+A PK+ + P PS R
Sbjct: 168 FH-ELNGKMVEVKRAVPKELS-PGPSMR 193
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D +++F ++G+V E IMRD +T R+RGFGFI F + ++ + + ++ G VE
Sbjct: 20 DRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEKHMID--GRMVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|302121706|gb|ADK92872.1| hnRNP [Hypericum perforatum]
Length = 477
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 55/79 (69%), Gaps = 5/79 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +FK++F QFG + + +M DH+T R RGFGFIT+D+++AVD +L K
Sbjct: 113 GLAST-VTE---SDFKNYFDQFGIIIDAVVMYDHNTQRPRGFGFITYDSDEAVDKVLTKT 168
Query: 84 NKLELAGAQVEVKKAEPKK 102
EL G VEVK+A PK+
Sbjct: 169 FH-ELNGKMVEVKRAVPKE 186
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F FGDV E IM+D +T R+RGFGFI F D ++ + K + G VE
Sbjct: 20 ERLKEYFGSFGDVVEAVIMKDRTTGRARGFGFIVFADPSVADRVIKE--KHNIDGRMVEA 77
Query: 96 KKAEPK-KPNLP 106
K+A P+ N+P
Sbjct: 78 KRAIPRDDQNIP 89
>gi|357156001|ref|XP_003577309.1| PREDICTED: uncharacterized protein LOC100846541 [Brachypodium
distachyon]
Length = 463
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+F+ +F QFG + + +M DH+T R RGFGFIT+D+E+AVD L K EL G VEVK
Sbjct: 121 DFRTYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEEAVDKALFKTFH-ELNGKMVEVK 179
Query: 97 KAEPKKPNLPQPSYR 111
+A PK+ + P PS R
Sbjct: 180 RAVPKELS-PGPSMR 193
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D +++F ++G+V E IMRD +T R+RGFGFI F + ++ + + ++ G VE
Sbjct: 20 DRLREYFEKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEKHMID--GRMVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|356527120|ref|XP_003532161.1| PREDICTED: uncharacterized protein LOC100805131 [Glycine max]
Length = 513
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 13 INRQT-----------TTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSR 61
INRQ+ T + G + +TE +FK +F QFG + + +M DH+T R
Sbjct: 123 INRQSGSAHVSPGPGRTKKIFVGGLPSTITE---SDFKTYFDQFGTITDVVVMYDHNTQR 179
Query: 62 SRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
RGFGFIT+D+E+AVD +L K EL G VEVK+A PK+
Sbjct: 180 PRGFGFITYDSEEAVDRVLYKTFH-ELNGKMVEVKRAVPKE 219
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F ++G+V E IMRD T R+RGFGF+ F + ++ +K + G VE
Sbjct: 54 ERLKEYFGKYGEVIETVIMRDRVTGRARGFGFVVFGDPSVAERVIM--DKHIIDGRTVEA 111
Query: 96 KKAEPK 101
KKA P+
Sbjct: 112 KKAVPR 117
>gi|224064856|ref|XP_002301585.1| predicted protein [Populus trichocarpa]
gi|222843311|gb|EEE80858.1| predicted protein [Populus trichocarpa]
Length = 479
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/79 (50%), Positives = 54/79 (68%), Gaps = 5/79 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +F+ +F QFG + + +M DH+T R RGFGFIT+D+E+AVD +L K
Sbjct: 113 GLAST-VTE---SDFRKYFDQFGLITDVVVMYDHNTQRPRGFGFITYDSEEAVDKVLMKT 168
Query: 84 NKLELAGAQVEVKKAEPKK 102
EL G VEVK+A PK+
Sbjct: 169 FH-ELNGKMVEVKRAVPKE 186
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ KD+F FG+V E IM+D +T R+RGFGF+ F + ++ + K + G VE
Sbjct: 20 ERLKDYFQSFGEVVEAVIMKDRTTGRARGFGFVVFSDPSIAERVIKE--KHSIDGRMVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|225447606|ref|XP_002272993.1| PREDICTED: uncharacterized protein LOC100246008 [Vitis vinifera]
Length = 478
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 28 TPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE 87
+ VTE +FK +F QFG + + +M DH+T R RGFGFIT+++E+AVD +L K E
Sbjct: 115 STVTE---SDFKKYFDQFGAITDVVVMYDHNTQRPRGFGFITYESEEAVDKVLLKTFH-E 170
Query: 88 LAGAQVEVKKAEPKK 102
L G VEVK+A PK+
Sbjct: 171 LNGKMVEVKRAVPKE 185
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D KD+F +G+V E IM+D +T R+RGFGF+ F + AV + + K K + G VE
Sbjct: 20 DRLKDYFSNYGEVVEAVIMKDRTTGRARGFGFVVF-ADPAVAERVIK-EKHNIDGRMVEA 77
Query: 96 KKAEPK 101
KKA PK
Sbjct: 78 KKAVPK 83
>gi|356501604|ref|XP_003519614.1| PREDICTED: uncharacterized protein LOC100814628 [Glycine max]
Length = 477
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 17/102 (16%)
Query: 13 INRQT----------TTQKMT--GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTS 60
INRQT T+K+ GL T +TE +FK +F QFG + + +M DH+T
Sbjct: 89 INRQTGSIHGSPSPGRTKKIFVGGLPST-ITE---SDFKKYFDQFGTITDVVVMYDHNTQ 144
Query: 61 RSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
R RGFGFIT+D+E+AVD +L K EL G VEVK+A PK+
Sbjct: 145 RPRGFGFITYDSEEAVDRVLYKTFH-ELNGKMVEVKRAVPKE 185
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K++F ++G+V E IMRD +T R+RGFGF+ F A + ++ +K + G VE
Sbjct: 20 ERLKEYFGKYGEVIEAVIMRDRTTGRARGFGFVVFADPSAAERVIM--DKHIIDGRTVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|449458854|ref|XP_004147161.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like [Cucumis
sativus]
Length = 462
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 33 PALDE--FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L E FK++F +G V + +M D +T R RGFGFI+FDTE+AVD +L K +L G
Sbjct: 120 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHK-TFHDLNG 178
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 179 KQVEVKRALPKDAN 192
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + D+ KD+F +G+V +MRD TSR RGFGF+ F +D +L +K + G
Sbjct: 16 ETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQ--DKHTIDGK 73
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 74 TVEAKRA 80
>gi|356566592|ref|XP_003551514.1| PREDICTED: uncharacterized protein LOC100794390 [Glycine max]
Length = 479
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 15/101 (14%)
Query: 13 INRQT-----------TTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSR 61
INRQ+ T + G + +TE +FK +F QFG + + +M DH+T R
Sbjct: 89 INRQSGSAHASPGPGRTKKIFVGGLPSTITE---SDFKMYFDQFGTITDVVVMYDHNTQR 145
Query: 62 SRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
RGFGFIT+D+E+AVD +L K EL G VEVK+A PK+
Sbjct: 146 PRGFGFITYDSEEAVDRVLYKTFH-ELNGKMVEVKRAVPKE 185
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ KD+F ++G+V E IMRD T R+RGFGF+ F + ++ +K + G VE
Sbjct: 20 ERLKDYFGKYGEVIEAVIMRDRVTGRARGFGFVVFADPSVAERVIM--DKHIIDGRTVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|449533488|ref|XP_004173706.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D-like [Cucumis sativus]
Length = 462
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 33 PALDE--FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L E FK++F +G V + +M D +T R RGFGFI+FDTE+AVD +L K +L G
Sbjct: 120 PTLTEEGFKEYFEAYGHVTDVVVMYDQNTRRPRGFGFISFDTEEAVDRVLHK-TFHDLNG 178
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 179 KQVEVKRALPKDAN 192
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + D+ KD+F +G+V +MRD TSR RGFGF+ F +D +L +K + G
Sbjct: 16 ETSEDKLKDYFSNYGEVMHTVVMRDKITSRPRGFGFVVFSDPSVLDRVLQ--DKHTIDGK 73
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 74 TVEAKRA 80
>gi|116787926|gb|ABK24693.1| unknown [Picea sitchensis]
Length = 476
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++FK++F QFG++ + +M DH+T R RGFGFI+FD+E AV+ +L K +L VEV
Sbjct: 124 EDFKNYFQQFGNITDVVVMYDHNTQRPRGFGFISFDSEDAVESVLQKSFH-QLNEKLVEV 182
Query: 96 KKAEPK 101
K+A PK
Sbjct: 183 KRALPK 188
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + +D+F ++G+V + IM+D T R+RGFGF+ F VD +A K + G
Sbjct: 16 ETSEERLRDYFSKYGEVVQTVIMKDRLTGRARGFGFVVFSDPSIVD--IALQEKHTIDGR 73
Query: 92 QVEVKKAEPK 101
VE KKA P+
Sbjct: 74 AVEAKKAVPR 83
>gi|147791134|emb|CAN68016.1| hypothetical protein VITISV_025150 [Vitis vinifera]
Length = 464
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 33 PALDE--FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L E F+ +F FG V + +M D ST R RGFGF++FDTE AVD +L K +L G
Sbjct: 119 PTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYK-TFHDLNG 177
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 178 KQVEVKRALPKDAN 191
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + D+ K++F +G+V + +MRD +T R RGFGF+ F +D +L + K + G
Sbjct: 16 ETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE--KHIIDGR 73
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 74 TVEAKRA 80
>gi|357146558|ref|XP_003574035.1| PREDICTED: uncharacterized protein LOC100832671 [Brachypodium
distachyon]
Length = 449
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEF+ +F FG V + +M D +T R RGFGFITFD+E AVD +L K +L G VEV
Sbjct: 129 DEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHK-TFHDLGGKMVEV 187
Query: 96 KKAEPKKPN 104
K+A P++ N
Sbjct: 188 KRALPREAN 196
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E ++ + F FG+V + +MRD T R RGFGF+ + AVD L + + L+ G
Sbjct: 16 ETTEEKLHEHFSTFGEVSQAAVMRDKLTGRPRGFGFVVYADPAAVDAALLEPHTLD--GR 73
Query: 92 QVEVKKA 98
V+VK+A
Sbjct: 74 TVDVKRA 80
>gi|225433229|ref|XP_002285419.1| PREDICTED: uncharacterized protein LOC100257917 [Vitis vinifera]
Length = 464
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 33 PALDE--FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L E F+ +F FG V + +M D ST R RGFGF++FDTE AVD +L K +L G
Sbjct: 119 PTLSEEGFRQYFEAFGHVTDVVVMYDQSTQRPRGFGFVSFDTEDAVDRVLYK-TFHDLNG 177
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 178 KQVEVKRALPKDAN 191
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + D+ K++F +G+V + +MRD +T R RGFGF+ F +D +L + K + G
Sbjct: 16 ETSEDKLKEYFGSYGEVSQAVVMRDKATGRPRGFGFVVFADPSILDRVLQE--KHIIDGR 73
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 74 TVEAKRA 80
>gi|326506828|dbj|BAJ91455.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+EF+ +F FG V + +M D +T R RGFGFITFD+E AVD +L K +L G VEV
Sbjct: 30 EEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHK-TFHDLGGKMVEV 88
Query: 96 KKAEPKKPN 104
K+A P++ N
Sbjct: 89 KRALPREAN 97
>gi|255574941|ref|XP_002528377.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
gi|223532245|gb|EEF34049.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Ricinus
communis]
Length = 470
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/74 (52%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
PAL DEF+ +F +G V + IM D +T R RGFGFI+FD E AVD +L K +L G
Sbjct: 119 PALTDDEFRQYFEAYGLVTDVVIMYDQNTQRPRGFGFISFDNEDAVDRVLHKTFH-DLNG 177
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 178 KQVEVKRALPKDAN 191
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D+ KD+F+Q+GDV + +MRD +T R RGFGF+ F +D +L +K + G
Sbjct: 16 ETTEDKLKDYFVQYGDVVQTVVMRDKTTGRPRGFGFVVFADPNILDRVLQ--DKHTIDGR 73
Query: 92 QVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFG 125
VE KKA ++ Q + R N P SG G
Sbjct: 74 TVEAKKALSRE---EQQTNARSGNLNPPRNSGSG 104
>gi|307105138|gb|EFN53389.1| hypothetical protein CHLNCDRAFT_36600 [Chlorella variabilis]
Length = 321
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+F+++F QFG+V E QIM+DH + RSRGFGF+TF + + + + A G +L G +VEV
Sbjct: 107 DQFREYFSQFGEVVEAQIMQDHMSGRSRGFGFVTFAEDASAESVFAAGTMHDLGGKKVEV 166
Query: 96 KKAEPK 101
K A PK
Sbjct: 167 KPATPK 172
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 2/67 (2%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ +D F ++G + E +MRD T R RGFGF+TF A D ++ + ++ G Q++
Sbjct: 23 EKLRDHFSKYGSIVEAVVMRDRQTGRPRGFGFVTFTEPAAADAVVEDVHVID--GRQIDA 80
Query: 96 KKAEPKK 102
KK+ P++
Sbjct: 81 KKSVPQE 87
>gi|307110580|gb|EFN58816.1| hypothetical protein CHLNCDRAFT_56910 [Chlorella variabilis]
Length = 949
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D F+ +F +FG V + +M DH R RGFGFITF E++VD + A+G + Q+E+
Sbjct: 116 DTFRAYFEEFGLVDDAVVMFDHENKRPRGFGFITFADEESVDAVFARGTIQTIHDKQIEI 175
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAY 128
K+A P+ P P ++ +P A+ G AY
Sbjct: 176 KRAVPRDSMPPSPRALQHRSPM-AHHPGVPPAY 207
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 35/65 (53%), Gaps = 2/65 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + +F +G VQE + D T R RGFGF+ F D +++ + ++ +VE K
Sbjct: 21 KLRAYFENYGTVQEAFVSYDKHTGRPRGFGFVVFADPIIADKVISVQHTID--RREVEAK 78
Query: 97 KAEPK 101
KA PK
Sbjct: 79 KALPK 83
>gi|356535448|ref|XP_003536257.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Glycine max]
Length = 471
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 33 PALDE--FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L E F+ +F +G+V + +M D +T R RGFGFI+FDTE AVD +L K +L G
Sbjct: 121 PTLTEEKFRQYFESYGNVTDVVVMYDQNTGRPRGFGFISFDTEDAVDRVLHKSFH-DLNG 179
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 180 KQVEVKRALPKDAN 193
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ K+ F +GDV +MR+ +T + RGFGF+ F +D +L +K + G V+
Sbjct: 20 DKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLE--DKHVIDGRTVDA 77
Query: 96 KKA 98
KKA
Sbjct: 78 KKA 80
>gi|427777107|gb|JAA54005.1| Putative heteroproteinous nuclear ribonucleoprotein at 27c
[Rhipicephalus pulchellus]
Length = 322
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 4/89 (4%)
Query: 17 TTTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAV 76
+TT+ G VTE L F F ++G V E IM D RSRGFGF++F+TE AV
Sbjct: 113 STTKIFVGGLPATVTETDLHAF---FSEYGKVTEVLIMYDQEQRRSRGFGFVSFETEDAV 169
Query: 77 DDLLAKGNKLELAGAQVEVKKAEPKKPNL 105
+ L ++ +E++G QVE K+AEPK+ +
Sbjct: 170 NQLTSR-RYVEISGKQVECKRAEPKESRM 197
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS E L+ +F +FG+V + +M + T RSRGFGF+TF V +LA G
Sbjct: 16 GLSWETTQESLLN----YFSRFGEVVDSVVMCNE-TGRSRGFGFVTFRDPSCVATVLA-G 69
Query: 84 NKLELAGAQVEVKKAEPK 101
+L G V+ K P+
Sbjct: 70 GPHQLDGRTVDPKSCNPR 87
>gi|356576454|ref|XP_003556346.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Glycine max]
Length = 476
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 33 PALDE--FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L E F+ +F +G V + +M D +T R RGFGFI+FDTE+AVD +L K +L G
Sbjct: 121 PTLTEEKFRLYFESYGHVTDVVVMYDQNTGRPRGFGFISFDTEEAVDRVLHKSFH-DLNG 179
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 180 KQVEVKRALPKDAN 193
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ K+ F +GDV +MR+ +T + RGFGF+ F +D +L +K + G V+
Sbjct: 20 DKLKEHFGNYGDVLSTSVMREKNTGKPRGFGFVVFADPNILDRVLE--DKHVIDGRTVDA 77
Query: 96 KKA 98
KKA
Sbjct: 78 KKA 80
>gi|297823133|ref|XP_002879449.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
gi|297325288|gb|EFH55708.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
PAL DEF+ +F +G V + IM D +T R RGFGF++FD+E +VD +L K +L G
Sbjct: 119 PALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFH-DLNG 177
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 178 KQVEVKRALPKDAN 191
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG+V + +MR+ +T R RGFGF+ F +D +L +K + V+VK+
Sbjct: 22 LREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQ--DKHHIDNRDVDVKR 79
Query: 98 AEPKKPNLP 106
A ++ P
Sbjct: 80 AMSREEQSP 88
>gi|326527725|dbj|BAK08137.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528387|dbj|BAJ93382.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 453
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+EF+ +F FG V + +M D +T R RGFGFITFD+E AVD +L K +L G VEV
Sbjct: 132 EEFRQYFQTFGAVTDVVVMYDQTTQRPRGFGFITFDSEDAVDRVLHK-TFHDLGGKMVEV 190
Query: 96 KKAEPKKPN 104
K+A P++ N
Sbjct: 191 KRALPREAN 199
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E ++ ++ F FG+V + +MRD T R RGFGF+ + +VD L + + L+ G
Sbjct: 16 ETTEEKLQEHFSNFGEVSQAAVMRDKLTGRPRGFGFVVYADPASVDAALQEPHTLD--GR 73
Query: 92 QVEVKKA 98
V+VK+A
Sbjct: 74 TVDVKRA 80
>gi|2244786|emb|CAB10209.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|7268135|emb|CAB78472.1| ribonucleoprotein like protein [Arabidopsis thaliana]
Length = 406
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L +EF+ +F +G V + IM D +T+R RGFGF++FD+E AVD +L K +L+G
Sbjct: 114 PTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFH-DLSG 172
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 173 KQVEVKRALPKDAN 186
>gi|115482462|ref|NP_001064824.1| Os10g0470900 [Oryza sativa Japonica Group]
gi|10716605|gb|AAG21903.1|AC026815_7 putative RNA binding protein [Oryza sativa Japonica Group]
gi|31432618|gb|AAP54226.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113639433|dbj|BAF26738.1| Os10g0470900 [Oryza sativa Japonica Group]
Length = 464
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 46/69 (66%), Gaps = 1/69 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEF+ +F +G V + +M D +T R RGFGFITFD E AVD +L K +L+G VEV
Sbjct: 142 DEFRQYFQTYGVVTDVVVMYDQNTQRPRGFGFITFDAEDAVDRVLHK-TFHDLSGKMVEV 200
Query: 96 KKAEPKKPN 104
K+A P++ N
Sbjct: 201 KRALPREAN 209
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E ++ +D F +GDV + +MRD T R RGFGF+ F +VD L + L+ G
Sbjct: 16 ETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDAALVDPHTLD--GR 73
Query: 92 QVEVKKA 98
V+VK+A
Sbjct: 74 TVDVKRA 80
>gi|15226106|ref|NP_180899.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2459445|gb|AAB80680.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22530920|gb|AAM96964.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23198416|gb|AAN15735.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330253737|gb|AEC08831.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/74 (50%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
PAL DEF+ +F +G V + IM D +T R RGFGF++FD+E +VD +L K +L G
Sbjct: 119 PALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSVDLVLHKTFH-DLNG 177
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 178 KQVEVKRALPKDAN 191
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG+V + +MR+ +T R RGFGF+ F +D +L +K + V+VK+
Sbjct: 22 LREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRVLQ--DKHHIDNRDVDVKR 79
Query: 98 AEPKKPNLP 106
A ++ P
Sbjct: 80 AMSREEQSP 88
>gi|22328624|ref|NP_193166.2| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|18152698|emb|CAC83517.1| ribonucleoprotein 1 [Arabidopsis thaliana]
gi|110740752|dbj|BAE98475.1| ribonucleoprotein like protein [Arabidopsis thaliana]
gi|332658011|gb|AEE83411.1| ribonucleoprotein 1 [Arabidopsis thaliana]
Length = 411
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L +EF+ +F +G V + IM D +T+R RGFGF++FD+E AVD +L K +L+G
Sbjct: 119 PTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFH-DLSG 177
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 178 KQVEVKRALPKDAN 191
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D+ ++ F +G+V + +MRD T R RGFGF+ F +D +L + + ++
Sbjct: 16 ETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQEKHSIDT--R 73
Query: 92 QVEVKKA 98
+V+VK+A
Sbjct: 74 EVDVKRA 80
>gi|297804878|ref|XP_002870323.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
gi|297316159|gb|EFH46582.1| hypothetical protein ARALYDRAFT_493480 [Arabidopsis lyrata subsp.
lyrata]
Length = 407
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 3/74 (4%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P L +EF+ +F +G V + IM D +T+R RGFGF++FD+E AVD +L K +L+G
Sbjct: 119 PTLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDRVLHKTFH-DLSG 177
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 178 KQVEVKRALPKDAN 191
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D+ ++ F +G+V + +MRD T R RGFGF+ F +D +L +K +
Sbjct: 16 ETDEDKLREHFSNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQ--DKHNIDTR 73
Query: 92 QVEVKKA 98
+V+VK+A
Sbjct: 74 EVDVKRA 80
>gi|346469143|gb|AEO34416.1| hypothetical protein [Amblyomma maculatum]
Length = 314
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 29 PVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
P T D FF ++G V E IM D RSRGFGFI+F++E+ V+ L A+ +++
Sbjct: 118 PATVTETD-LHAFFSEYGKVTETLIMYDQEQRRSRGFGFISFESEEPVNQLTAQ-RYVDI 175
Query: 89 AGAQVEVKKAEPKKPNLPQ 107
+G QVE K+AEPK+ P+
Sbjct: 176 SGKQVECKRAEPKESRPPK 194
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS E L+ +F +FG+V + +M + T RSRGFGF+TF V +LA G
Sbjct: 15 GLSWETTQESLLN----YFSRFGEVVDCVVMCNE-TGRSRGFGFVTFRDPSCVATVLA-G 68
Query: 84 NKLELAGAQVEVKKAEP 100
+L G V+ K P
Sbjct: 69 GPHQLDGRTVDPKSCNP 85
>gi|343172816|gb|AEL99111.1| ribonucleoprotein, partial [Silene latifolia]
Length = 319
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 33 PAL-DE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L DE F+ +F FG V + IM D +T R RGFGFI+FD+E AVD +L + +L G
Sbjct: 44 PSLTDEGFRQYFEGFGHVTDVVIMFDQNTQRPRGFGFISFDSEDAVDRVL-QSTFHDLDG 102
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 103 KQVEVKRALPKDAN 116
>gi|343172818|gb|AEL99112.1| ribonucleoprotein, partial [Silene latifolia]
Length = 319
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/74 (51%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 33 PAL-DE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
P+L DE F+ +F FG V + IM D +T R RGFGFI+FD+E AVD +L + +L G
Sbjct: 44 PSLTDEGFRQYFEGFGHVTDVVIMFDQNTQRPRGFGFISFDSEDAVDRVL-QSTFHDLDG 102
Query: 91 AQVEVKKAEPKKPN 104
QVEVK+A PK N
Sbjct: 103 KQVEVKRALPKDAN 116
>gi|293336929|ref|NP_001168878.1| uncharacterized protein LOC100382683 [Zea mays]
gi|223973459|gb|ACN30917.1| unknown [Zea mays]
gi|414871120|tpg|DAA49677.1| TPA: hypothetical protein ZEAMMB73_860016 [Zea mays]
Length = 443
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D F+ +F FG V + +M D +T R RGFGFITFD+E AVD +L K +L G VEV
Sbjct: 129 DGFRQYFQTFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDHVLQK-TFHDLGGKLVEV 187
Query: 96 KKAEPKKPN 104
K+A P++ N
Sbjct: 188 KRALPREAN 196
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E ++ + F +G+V + +MRD +T R RGFGF+ F VD L + L+ G
Sbjct: 16 ETTEEKLSEHFSAYGEVTQAAVMRDKTTGRPRGFGFVVFADPAVVDRALQDPHTLD--GR 73
Query: 92 QVEVKKA 98
V+VK+A
Sbjct: 74 TVDVKRA 80
>gi|226507640|ref|NP_001146692.1| uncharacterized protein LOC100280293 [Zea mays]
gi|219888359|gb|ACL54554.1| unknown [Zea mays]
gi|413934065|gb|AFW68616.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934066|gb|AFW68617.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
gi|413934067|gb|AFW68618.1| hypothetical protein ZEAMMB73_548572 [Zea mays]
Length = 453
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D F+ +F FG V + +M D +T R RGFGFITFD+E AVD +L K +L G VEV
Sbjct: 132 DGFRQYFETFGIVTDVVVMYDQNTQRPRGFGFITFDSEDAVDRVLQK-TFHDLGGKLVEV 190
Query: 96 KKAEPKKPN 104
K+A P++ N
Sbjct: 191 KRALPREAN 199
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E ++ + F +G+V + +MRD T R RGFGF+ F AVD L + L+ G
Sbjct: 16 ETTEEKLSEHFSAYGEVTQAAVMRDKITGRPRGFGFVVFADPAAVDRALQDPHTLD--GR 73
Query: 92 QVEVKKA 98
V+VK+A
Sbjct: 74 TVDVKRA 80
>gi|302835614|ref|XP_002949368.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
gi|300265195|gb|EFJ49387.1| hypothetical protein VOLCADRAFT_104291 [Volvox carteri f.
nagariensis]
Length = 340
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 46/75 (61%), Gaps = 2/75 (2%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 86
L P TE K +F Q+G V E +M DH++ RSRGFGF+TF E +V+ + A G
Sbjct: 155 LAPDTEDV--HLKQYFEQYGTVVEALVMVDHNSGRSRGFGFVTFGEESSVEKVFAAGQMH 212
Query: 87 ELAGAQVEVKKAEPK 101
EL G QVEVK A PK
Sbjct: 213 ELGGKQVEVKSATPK 227
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/35 (48%), Positives = 27/35 (77%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 70
++ K++F+++G+V + +MRD T R RGFGFITF
Sbjct: 75 EKLKEYFLKYGEVHDVVVMRDRQTRRPRGFGFITF 109
>gi|385455|gb|AAB26989.1| SqdB [Drosophila melanogaster]
Length = 308
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++A
Sbjct: 144 TTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIA 202
Query: 90 GAQVEVKKAEPKKPN 104
G +V+VK+A PK N
Sbjct: 203 GKEVDVKRATPKPEN 217
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A+D + A +
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI----- 120
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 121 -INSKKVDPKK 130
>gi|385454|gb|AAB26988.1| SqdA [Drosophila melanogaster]
Length = 321
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++A
Sbjct: 144 TTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIA 202
Query: 90 GAQVEVKKAEPKKPN 104
G +V+VK+A PK N
Sbjct: 203 GKEVDVKRATPKPEN 217
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A+D + A +
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI----- 120
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 121 -INSKKVDPKK 130
>gi|225438019|ref|XP_002274734.1| PREDICTED: uncharacterized protein LOC100263471 [Vitis vinifera]
Length = 441
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F+ +F +G V + +M D +T R RGFGFI+FDTE AVD +L K +L G VEVK+
Sbjct: 126 FRQYFETYGHVTDVVVMYDQNTQRPRGFGFISFDTEDAVDRVLHK-TFHDLNGKLVEVKR 184
Query: 98 AEPKKPN 104
A PK N
Sbjct: 185 ALPKDAN 191
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ K++F Q+GDV + IMRD +T R RGFGF+ F +D +L + K + G VE
Sbjct: 20 EKLKEYFNQYGDVTQTVIMRDKTTGRPRGFGFVVFADPSVLDAVLQE--KHTIDGRTVEA 77
Query: 96 KKA 98
K+A
Sbjct: 78 KRA 80
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 49/77 (63%), Gaps = 1/77 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
+ E + DE + +F QFG++ E ++ D ++ + F FITFD+E V++LL K K ++
Sbjct: 128 IPEISDDEIRAYFAQFGNIVEMEMPFDKQKNQRKAFCFITFDSETVVNELL-KTPKQTIS 186
Query: 90 GAQVEVKKAEPKKPNLP 106
G +V+VKKA PK N P
Sbjct: 187 GKEVDVKKATPKPDNAP 203
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F Q+G++ + D +T RSRGF FI + + ++D ++A G+ +
Sbjct: 50 ETTEKELRDHFGQYGEIDSINVKTDPTTGRSRGFAFIVYKSADSIDKVVAAGDHI----- 104
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 105 -INNKKVDPKK 114
>gi|390178414|ref|XP_001359012.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859439|gb|EAL28155.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 310
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K +++G
Sbjct: 144 TEISDEEIKTYFSQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKISG 202
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 203 KEVDVKRATPKPEN 216
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F +FG+++ + D T RSRGF FI F +A+D + + G +
Sbjct: 65 ETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSAGEHI----- 119
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 120 -INSKKVDPKK 129
>gi|195036936|ref|XP_001989924.1| GH19060 [Drosophila grimshawi]
gi|193894120|gb|EDV92986.1| GH19060 [Drosophila grimshawi]
Length = 349
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 48/74 (64%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K +F QFG + E ++ D S +GF FITFD+EQ V DLL K K ++AG
Sbjct: 148 TEISDEEIKTYFSQFGTIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLL-KTPKQKIAG 206
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 207 KEVDVKRATPKPEN 220
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A+D + A +
Sbjct: 69 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSAAEEHI----- 123
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 124 -INSKKVDPKK 133
>gi|24646609|ref|NP_731826.1| squid, isoform A [Drosophila melanogaster]
gi|11038|emb|CAA44503.1| hrp40.1 [Drosophila melanogaster]
gi|21428420|gb|AAM49870.1| LD09691p [Drosophila melanogaster]
gi|23171185|gb|AAF54964.2| squid, isoform A [Drosophila melanogaster]
gi|220943526|gb|ACL84306.1| sqd-PA [synthetic construct]
gi|220953540|gb|ACL89313.1| sqd-PA [synthetic construct]
Length = 321
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++A
Sbjct: 144 TTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIA 202
Query: 90 GAQVEVKKAEPKKPN 104
G +V+VK+A PK N
Sbjct: 203 GKEVDVKRATPKPEN 217
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A+D + A +
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI----- 120
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 121 -INSKKVDPKK 130
>gi|24646605|ref|NP_652209.1| squid, isoform C [Drosophila melanogaster]
gi|386765705|ref|NP_001247088.1| squid, isoform E [Drosophila melanogaster]
gi|23171183|gb|AAN13570.1| squid, isoform C [Drosophila melanogaster]
gi|73853364|gb|AAZ86753.1| LD29474p [Drosophila melanogaster]
gi|220951946|gb|ACL88516.1| sqd-PC [synthetic construct]
gi|383292688|gb|AFH06406.1| squid, isoform E [Drosophila melanogaster]
Length = 308
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++A
Sbjct: 144 TTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIA 202
Query: 90 GAQVEVKKAEPKKPN 104
G +V+VK+A PK N
Sbjct: 203 GKEVDVKRATPKPEN 217
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A+D + A +
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI----- 120
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 121 -INSKKVDPKK 130
>gi|321469931|gb|EFX80909.1| hypothetical protein DAPPUDRAFT_224415 [Daphnia pulex]
Length = 464
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ ++FF Q+G V E IM D +SRGFGF+TF++E++VD + + + + G QVE+K
Sbjct: 130 DLRNFFSQYGKVSEVVIMYDQEKKKSRGFGFLTFESEESVDRCTGE-HYVSINGKQVEIK 188
Query: 97 KAEPK 101
KAEP+
Sbjct: 189 KAEPR 193
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D +F Q+G+V + +M++ T RSRGFGFITF V +L + L
Sbjct: 30 ETTRDNLLRYFSQYGEVVDCVVMKNPETGRSRGFGFITFADPNNVGLVLQNTPHI-LDNR 88
Query: 92 QVEVKKAEPK 101
++ K P+
Sbjct: 89 TIDPKPCNPR 98
>gi|194901408|ref|XP_001980244.1| GG17035 [Drosophila erecta]
gi|190651947|gb|EDV49202.1| GG17035 [Drosophila erecta]
Length = 345
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++AG
Sbjct: 145 TEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIAG 203
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 204 KEVDVKRATPKPEN 217
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A+D + A +
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI----- 120
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 121 -INSKKVDPKK 130
>gi|11040|emb|CAA44504.1| hrp40.2 [Drosophila melanogaster]
Length = 345
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++AG
Sbjct: 145 TEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIAG 203
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 204 KEVDVKRATPKPEN 217
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A+D + A +
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI----- 120
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 121 -INSKKVDPKK 130
>gi|24646607|ref|NP_731825.1| squid, isoform B [Drosophila melanogaster]
gi|55584092|sp|Q08473.3|SQD_DROME RecName: Full=RNA-binding protein squid; AltName:
Full=Heterogeneous nuclear ribonucleoprotein 40;
Short=HNRNP 40
gi|23171184|gb|AAF54963.2| squid, isoform B [Drosophila melanogaster]
Length = 344
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++AG
Sbjct: 145 TEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIAG 203
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 204 KEVDVKRATPKPEN 217
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A+D + A +
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAADEHI----- 120
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 121 -INSKKVDPKK 130
>gi|195329216|ref|XP_002031307.1| GM25920 [Drosophila sechellia]
gi|194120250|gb|EDW42293.1| GM25920 [Drosophila sechellia]
Length = 345
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++AG
Sbjct: 145 TEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIAG 203
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 204 KEVDVKRATPKPEN 217
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A++ + A +
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSAVEEHI----- 120
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 121 -INSKKVDPKK 130
>gi|157110296|ref|XP_001651039.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110300|ref|XP_001651041.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878763|gb|EAT42988.1| AAEL005515-PG [Aedes aegypti]
gi|108878765|gb|EAT42990.1| AAEL005515-PC [Aedes aegypti]
Length = 300
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K ++G
Sbjct: 125 TEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQTISG 183
Query: 91 AQVEVKKAEPKKPNL 105
+V+VKKA PK N+
Sbjct: 184 KEVDVKKATPKPDNM 198
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + E K+ F Q+G+++ + D +T RSRGF FI + + ++D ++A G+ +
Sbjct: 46 ETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHV----- 100
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 101 -INNKKVDPKK 110
>gi|157110294|ref|XP_001651038.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878762|gb|EAT42987.1| AAEL005515-PF [Aedes aegypti]
Length = 325
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K ++G
Sbjct: 125 TEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQTISG 183
Query: 91 AQVEVKKAEPKKPNL 105
+V+VKKA PK N+
Sbjct: 184 KEVDVKKATPKPDNM 198
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + E K+ F Q+G+++ + D +T RSRGF FI + + ++D ++A G+ +
Sbjct: 46 ETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHV----- 100
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 101 -INNKKVDPKK 110
>gi|195571113|ref|XP_002103548.1| GD20486 [Drosophila simulans]
gi|194199475|gb|EDX13051.1| GD20486 [Drosophila simulans]
Length = 345
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++AG
Sbjct: 145 TEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIAG 203
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 204 KEVDVKRATPKPEN 217
Score = 38.1 bits (87), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 11/80 (13%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A++ + A
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKVSA---------- 115
Query: 92 QVEVKKAEPKKPNLPQPSYR 111
VE KK +LP+ R
Sbjct: 116 -VEEHIINSKKVDLPKAKAR 134
>gi|195500849|ref|XP_002097550.1| GE24428 [Drosophila yakuba]
gi|194183651|gb|EDW97262.1| GE24428 [Drosophila yakuba]
Length = 345
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/74 (47%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE +E K +F QFG++ E ++ D S+ +GF FITFD+EQ V DLL K K ++AG
Sbjct: 145 TEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIAG 203
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 204 KEVDVKRATPKPEN 217
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F ++G+++ + D T RSRGF FI F +A+D + A +
Sbjct: 66 ETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSAVDEHI----- 120
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 121 -INSKKVDPKK 130
>gi|195113435|ref|XP_002001273.1| GI10695 [Drosophila mojavensis]
gi|193917867|gb|EDW16734.1| GI10695 [Drosophila mojavensis]
Length = 342
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 1/75 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
TE + +E K +F QFG++ E ++ D S +GF FITFD+EQ V DLL K K +++
Sbjct: 145 TTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLL-KTPKQKIS 203
Query: 90 GAQVEVKKAEPKKPN 104
G +V+VK+A PK N
Sbjct: 204 GKEVDVKRATPKPEN 218
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +FG+++ + D T RSRGF FI F +A+D + A + + K
Sbjct: 72 ELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQVSAAEEHI------INSK 125
Query: 97 KAEPKK 102
K +PKK
Sbjct: 126 KVDPKK 131
>gi|170051646|ref|XP_001861859.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167872815|gb|EDS36198.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 308
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + DE K FF QFG++ + ++ D ++ +GF FITFD+EQ V++LL K K ++G
Sbjct: 129 TEISDDEIKTFFGQFGNIVDVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQTISG 187
Query: 91 AQVEVKKAEPKKPN 104
+V+VKKA PK N
Sbjct: 188 KEVDVKKATPKPDN 201
Score = 46.2 bits (108), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + E K+ F Q+GD++ + D +T RSRGF FI + + ++D ++A G+ +
Sbjct: 50 ETSDKELKEHFGQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHV----- 104
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 105 -INNKKVDPKK 114
>gi|195390397|ref|XP_002053855.1| GJ23113 [Drosophila virilis]
gi|194151941|gb|EDW67375.1| GJ23113 [Drosophila virilis]
Length = 343
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K +F QFG++ E ++ D S +GF FITFD+EQ V DLL K K +++G
Sbjct: 146 TEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQVVTDLL-KTPKQKISG 204
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 205 KEVDVKRATPKPEN 218
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F +FG+++ + D T RSRGF FI F +A++ + A +
Sbjct: 67 ETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEQVSAAEEHI----- 121
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 122 -INSKKVDPKK 131
>gi|157110298|ref|XP_001651040.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110302|ref|XP_001651042.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878764|gb|EAT42989.1| AAEL005515-PD [Aedes aegypti]
gi|108878766|gb|EAT42991.1| AAEL005515-PA [Aedes aegypti]
Length = 280
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K ++G
Sbjct: 125 TEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQTISG 183
Query: 91 AQVEVKKAEPKKPNL 105
+V+VKKA PK N+
Sbjct: 184 KEVDVKKATPKPDNM 198
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E K+ F Q+G+++ + D +T RSRGF FI + + ++D ++A G+ + + K
Sbjct: 51 ELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVAAGDHV------INNK 104
Query: 97 KAEPKK 102
K +PKK
Sbjct: 105 KVDPKK 110
>gi|347963748|ref|XP_310701.5| AGAP000399-PA [Anopheles gambiae str. PEST]
gi|333467053|gb|EAA06653.5| AGAP000399-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 1/75 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
+E + +E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K ++
Sbjct: 191 TSEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQTIS 249
Query: 90 GAQVEVKKAEPKKPN 104
G +V+VKKA PK N
Sbjct: 250 GKEVDVKKATPKPEN 264
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + E K+ F Q+GD++ + D +T RSRGF FI + + ++D ++A ++
Sbjct: 113 ETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA------VSEH 166
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 167 VINNKKVDPKK 177
>gi|194741284|ref|XP_001953119.1| GF17370 [Drosophila ananassae]
gi|190626178|gb|EDV41702.1| GF17370 [Drosophila ananassae]
Length = 343
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
TE +E K +F QFG++ E ++ D S+ +GF FITFD EQ V DLL K K ++A
Sbjct: 145 TTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDAEQVVTDLL-KTPKQKIA 203
Query: 90 GAQVEVKKAEPKKPN 104
G +V+VK+A PK N
Sbjct: 204 GKEVDVKRATPKPEN 218
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F +FG+++ + D T RSRGF FI F T +A+D + A +
Sbjct: 67 ETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTTTEAIDKVSAAEEHI----- 121
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 122 -INSKKVDPKK 131
>gi|242080115|ref|XP_002444826.1| hypothetical protein SORBIDRAFT_07g028730 [Sorghum bicolor]
gi|241941176|gb|EES14321.1| hypothetical protein SORBIDRAFT_07g028730 [Sorghum bicolor]
Length = 304
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/233 (31%), Positives = 101/233 (43%), Gaps = 51/233 (21%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F Q+G++ + IM+D TS RGFGFIT+ V+ ++ +K + G ++E+KKAEPK
Sbjct: 102 FGQYGEIVDSVIMKDRYTSHPRGFGFITYSNPAVVNKVIE--DKHVINGKEMEIKKAEPK 159
Query: 102 KPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGGGFAGGGFGGSGGGGGGGGYRSSGAYGV 161
K S P A+G AY A FGG
Sbjct: 160 K------SSNPPPPPPAAHGRNTRSAYDSVSRDYPAADNFGGMA---------------- 197
Query: 162 RGGGYGGYGVGGEFGGYGGYGGGMGAYRGEPSSLGYSGRYGGFNRGY-------DVTG-D 213
YG Y GG+G Y G SS GY R+G + R + D++G
Sbjct: 198 --------------SAYGNYKGGLGGY-GAASSFGYLDRFGLYGRCFGGSYASIDLSGYR 242
Query: 214 YGGLNESYGGYGGSGVGGGGGYGGGPSGYDIGLGSSYGGSSGGAFFGSRGGYG 266
GG +ES+G G SG GG G G G++Y GGA+ + GGYG
Sbjct: 243 CGGDDESFGALGNSGFGGDADESFGGGGSYGFSGTAY----GGAYDPTLGGYG 291
>gi|157118269|ref|XP_001653144.1| heterogeneous nuclear ribonucleoprotein 27c [Aedes aegypti]
gi|94468876|gb|ABF18287.1| RNA-binding protein musashi/mRNA cleavage and polyadenylation
factor I complex subunit HRP1 [Aedes aegypti]
gi|108875770|gb|EAT39995.1| AAEL008257-PA [Aedes aegypti]
Length = 398
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + FF ++G+V E IM D +SRGFGF++F+ E AV+ A+ + + ++G QVE+K
Sbjct: 123 DLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEPAVERATAE-HFVNISGKQVEIK 181
Query: 97 KAEPK 101
KAEP+
Sbjct: 182 KAEPR 186
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + +F ++G+V + +M+++ T RSRGFGF+TF VD L G L G
Sbjct: 28 ETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPDNVDRALENGPHT-LDGR 86
Query: 92 QVEVKKAEPKKPNLPQ 107
++ K P+ + P+
Sbjct: 87 TIDPKPCNPRSLHKPK 102
>gi|170060137|ref|XP_001865670.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
gi|167878677|gb|EDS42060.1| heterogeneous nuclear ribonucleoprotein 27C [Culex
quinquefasciatus]
Length = 402
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + FF ++G+V E IM D +SRGFGF++F+ E AV+ A+ + + ++G QVE+K
Sbjct: 124 DLRSFFSRYGNVMEVVIMYDQEKKKSRGFGFLSFENEAAVERATAE-HFVNISGKQVEIK 182
Query: 97 KAEPK 101
KAEP+
Sbjct: 183 KAEPR 187
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 42/76 (55%), Gaps = 1/76 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + +F ++G+V + +M+++ T RSRGFGF+TF + V+ L G L G
Sbjct: 29 ETTQENLQRYFGRYGEVIDCVVMKNNETGRSRGFGFVTFADPENVERALENGPHT-LDGR 87
Query: 92 QVEVKKAEPKKPNLPQ 107
++ K P+ + P+
Sbjct: 88 TIDPKPCNPRSLHKPK 103
>gi|115486383|ref|NP_001068335.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|108864610|gb|ABA94921.2| RNA-binding protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645557|dbj|BAF28698.1| Os11g0637700 [Oryza sativa Japonica Group]
gi|215697828|dbj|BAG92021.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215740693|dbj|BAG97349.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 467
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 100/219 (45%), Gaps = 45/219 (20%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +F+ +F QFG + + +M DH+T R RGFGFIT+D+E AVD L K
Sbjct: 112 GLAST-VTEA---DFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 167
Query: 84 NKLELAGAQVEV-----KKAEPKKPNLPQP------SYRRYNNPKPAYGSGFGDA-YGGY 131
EL G VEV K+ P P++ P + R NN Y G+ + GGY
Sbjct: 168 FH-ELNGKMVEVKRAVPKELSP-GPSMRSPVGGFNYAVNRANNFLNGYTQGYNPSPVGGY 225
Query: 132 GGGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGE 191
G A G GG Y S G GGYGVG F GM G
Sbjct: 226 GMRMDARFGL----LSGGRSSYPSFG---------GGYGVGMNF------DPGMNPAIGG 266
Query: 192 PSSLGYSGRYG--------GFNRGYDVTGDYGGLNESYG 222
SS S +YG G + Y+ YGG+N+S G
Sbjct: 267 SSSFNNSLQYGRQLNPYYSGNSGRYNSNVSYGGVNDSTG 305
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D +++F ++G+V E IMRD +T R+RGFGFI F + ++ + + ++ G VE
Sbjct: 20 DRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEKHMID--GRMVEA 77
Query: 96 KKAEPK 101
KKA P+
Sbjct: 78 KKAVPR 83
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K +K + G
Sbjct: 133 TELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTSKQTING 191
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 192 KEVDVKKATPK 202
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E ++ F +GD++ + D +T RSRGF FI F +++D +++ G+ + + K
Sbjct: 59 ELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMSAGDHV------INNK 112
Query: 97 KAEPKK 102
K +PKK
Sbjct: 113 KVDPKK 118
>gi|125577795|gb|EAZ19017.1| hypothetical protein OsJ_34549 [Oryza sativa Japonica Group]
Length = 481
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 79/219 (36%), Positives = 100/219 (45%), Gaps = 45/219 (20%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GL+ T VTE +F+ +F QFG + + +M DH+T R RGFGFIT+D+E AVD L K
Sbjct: 126 GLAST-VTEA---DFRKYFEQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALFKT 181
Query: 84 NKLELAGAQVEV-----KKAEPKKPNLPQP------SYRRYNNPKPAYGSGFGDA-YGGY 131
EL G VEV K+ P P++ P + R NN Y G+ + GGY
Sbjct: 182 FH-ELNGKMVEVKRAVPKELSP-GPSMRSPVGGFNYAVNRANNFLNGYTQGYNPSPVGGY 239
Query: 132 GGGGFAGGGFGGSGGGGGGGGYRSSGAYGVRGGGYGGYGVGGEFGGYGGYGGGMGAYRGE 191
G A G GG Y S G GGYGVG F GM G
Sbjct: 240 GMRMDARFGL----LSGGRSSYPSFG---------GGYGVGMNF------DPGMNPAIGG 280
Query: 192 PSSLGYSGRYG--------GFNRGYDVTGDYGGLNESYG 222
SS S +YG G + Y+ YGG+N+S G
Sbjct: 281 SSSFNNSLQYGRQLNPYYSGNSGRYNSNVSYGGVNDSTG 319
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 40/78 (51%), Gaps = 12/78 (15%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE-------- 87
D +++F ++G+V E IMRD +T R+RGFGFI F + ++ + + ++
Sbjct: 20 DRLREYFDKYGEVVEAVIMRDRATGRARGFGFIVFADPAVAERVIMEKHMIDGRMIHDDD 79
Query: 88 ----LAGAQVEVKKAEPK 101
VE KKA P+
Sbjct: 80 DGVLDPSMVVEAKKAVPR 97
>gi|195451832|ref|XP_002073095.1| GK13337 [Drosophila willistoni]
gi|194169180|gb|EDW84081.1| GK13337 [Drosophila willistoni]
Length = 353
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 49/74 (66%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E + +F QFG + E ++ D S+ +GF FITFD+EQ V DLL K K +++G
Sbjct: 155 TEISDEEIRTYFSQFGTIVEVEMPFDKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKISG 213
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 214 KEVDVKRATPKPEN 227
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +FGD+ + D T RSRGF FI F +A+D + + + + G +V+ K
Sbjct: 81 ELRDHFGKFGDIDSINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSAEEHV-INGKKVDPK 139
Query: 97 KAE 99
KA+
Sbjct: 140 KAK 142
>gi|238014210|gb|ACR38140.1| unknown [Zea mays]
gi|414873814|tpg|DAA52371.1| TPA: glycine-rich RNA-binding protein 8 isoform 1 [Zea mays]
gi|414873815|tpg|DAA52372.1| TPA: glycine-rich RNA-binding protein 8 isoform 2 [Zea mays]
gi|414873816|tpg|DAA52373.1| TPA: glycine-rich RNA-binding protein 8 isoform 3 [Zea mays]
Length = 205
Score = 63.5 bits (153), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
LS + E KD F +FG++ E +++ D + RSRGFGF+TFD +QA++D +
Sbjct: 13 NLSWSTTDES----LKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGM 68
Query: 84 NKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPK 117
N L+L G + V KA+P+ P + R Y+ +
Sbjct: 69 NGLDLDGRNITVDKAQPQGPGRDRNGDRDYDRER 102
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K +K + G
Sbjct: 145 TELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTSKQTING 203
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 204 KEVDVKKATPK 214
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E ++ F +GD++ + D +T RSRGF FI F +++D +++ G+ + + K
Sbjct: 71 ELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMSAGDHV------INNK 124
Query: 97 KAEPKK 102
K +PKK
Sbjct: 125 KVDPKK 130
>gi|307193268|gb|EFN76159.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 334
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K +K + G
Sbjct: 163 TELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTSKQTING 221
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 222 KEVDVKKATPK 232
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E ++ F +GD++ + D +T RSRGF FI F +++D ++A G+ + + K
Sbjct: 89 ELREHFSSYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAAGDHV------INNK 142
Query: 97 KAEPKK 102
K +PKK
Sbjct: 143 KVDPKK 148
>gi|347963746|ref|XP_003436985.1| AGAP000399-PB [Anopheles gambiae str. PEST]
gi|333467054|gb|EGK96461.1| AGAP000399-PB [Anopheles gambiae str. PEST]
Length = 371
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
+E + +E K FF QFG++ E ++ D ++ +GF FITFD+EQ V++LL K K ++G
Sbjct: 192 SEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQVVNELL-KTPKQTISG 250
Query: 91 AQVEVKKAEPKKPN 104
+V+VKKA PK N
Sbjct: 251 KEVDVKKATPKPEN 264
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + E K+ F Q+GD++ + D +T RSRGF FI + + ++D ++A ++
Sbjct: 113 ETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKVVA------VSEH 166
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 167 VINNKKVDPKK 177
>gi|307178992|gb|EFN67508.1| RNA-binding protein squid [Camponotus floridanus]
Length = 327
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K +K + G
Sbjct: 135 TELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTSKQTING 193
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 194 KEVDVKKATPK 204
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E ++ F +GD++ + D +T RSRGF FI F +++D ++ G+ + + K
Sbjct: 61 ELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMGAGDHV------INNK 114
Query: 97 KAEPKK 102
K +PKK
Sbjct: 115 KVDPKK 120
>gi|47551207|ref|NP_999784.1| stage specific activator protein [Strongylocentrotus purpuratus]
gi|4071008|gb|AAC98546.1| stage specific activator protein [Strongylocentrotus purpuratus]
Length = 382
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + F G+V++ IM D T + RGFGF+T D+E+AV+ L+ + + LEL G +E+
Sbjct: 113 EDLYELFRSHGNVEDVHIMNDTDTGKHRGFGFVTLDSEEAVEKLV-RMHHLELKGKSMEI 171
Query: 96 KKAEPK 101
KKA+PK
Sbjct: 172 KKAQPK 177
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTS-RSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVE 94
D F+ +F +FG + + +M D +++GFGF+TF VDD+ + N L G ++
Sbjct: 20 DTFRAYFEKFGKLSDIILMMDKDKPGQNKGFGFVTFADPACVDDVTNEKNH-NLEGKGLD 78
Query: 95 VKKAEPK 101
K+ + +
Sbjct: 79 CKRCKAR 85
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
+E + DE K+FF FG++ E ++ D + ++ +GF FITF++EQ V++LL K K +AG
Sbjct: 131 SEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTIAG 189
Query: 91 AQVEVKKAEPK 101
+V+VK+A PK
Sbjct: 190 KEVDVKRATPK 200
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E ++ F +G+++ + D +T RSRGF FI F ++D ++A G+ + K
Sbjct: 57 ELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKVMAAGDHT------INNK 110
Query: 97 KAEPKK 102
K +PKK
Sbjct: 111 KVDPKK 116
>gi|226499338|ref|NP_001149519.1| glycine-rich RNA-binding protein 8 [Zea mays]
gi|195627730|gb|ACG35695.1| glycine-rich RNA-binding protein 8 [Zea mays]
Length = 198
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 45/66 (68%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
KD F +FG++ E +++ D + RSRGFGF+TFD +QA++D + N L+L G + V K
Sbjct: 23 LKDAFSKFGNLTEAKVVLDKFSGRSRGFGFVTFDEKQAMEDAIEGMNGLDLDGRNITVDK 82
Query: 98 AEPKKP 103
A+P+ P
Sbjct: 83 AQPQGP 88
>gi|307180208|gb|EFN68241.1| RNA-binding protein squid [Camponotus floridanus]
Length = 296
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 50/71 (70%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K+FF QFG++ E ++ D + ++ +GF FITF++EQ V++LL K K ++G
Sbjct: 138 TELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTISG 196
Query: 91 AQVEVKKAEPK 101
V+VKKA PK
Sbjct: 197 KAVDVKKATPK 207
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E ++ F +GD++ + D +T RSRGF FI F +A+D +++ G+ + + K
Sbjct: 64 ELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSAGDHV------INNK 117
Query: 97 KAEPKK 102
K +PKK
Sbjct: 118 KVDPKK 123
>gi|322786135|gb|EFZ12742.1| hypothetical protein SINV_01194 [Solenopsis invicta]
Length = 330
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K+FF QFG++ E ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 133 TELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 191
Query: 91 AQVEVKKAEPK 101
V+VKKA PK
Sbjct: 192 KAVDVKKATPK 202
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E ++ F +GD++ + D +T RSRGF FI F +A+D +++ G+ + + K
Sbjct: 59 ELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSAGDHV------INNK 112
Query: 97 KAEPKK 102
K +PKK
Sbjct: 113 KVDPKK 118
>gi|293335932|ref|NP_001168160.1| uncharacterized protein LOC100381912 [Zea mays]
gi|223946377|gb|ACN27272.1| unknown [Zea mays]
gi|414872130|tpg|DAA50687.1| TPA: hypothetical protein ZEAMMB73_997132 [Zea mays]
Length = 297
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ +D F +FG V + QIM + T+R RGFGF+TF+ +AVD + + + E+ G + V
Sbjct: 22 KLEDAFGRFGKVVDAQIMVERHTNRHRGFGFVTFEDRRAVDSAIKEMHGQEIDGRTISVN 81
Query: 97 KAEPK 101
KAEPK
Sbjct: 82 KAEPK 86
>gi|112983696|ref|NP_001037323.1| squid protein homologue [Bombyx mori]
gi|784909|dbj|BAA07210.1| Bmsqd-1 [Bombyx mori]
Length = 287
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
+E + DE ++FF +FG + E ++ D + ++ +GF FITF++EQ V+DLL K K + G
Sbjct: 132 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGG 190
Query: 91 AQVEVKKAEPK 101
+V+VK+A PK
Sbjct: 191 KEVDVKRATPK 201
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F + +++ + +T RSRGF FI F +++D ++A G + K
Sbjct: 58 ELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMAAGEHT------INNK 111
Query: 97 KAEPKK 102
K +PKK
Sbjct: 112 KVDPKK 117
>gi|110758129|ref|XP_392465.3| PREDICTED: RNA-binding protein squid-like isoform 1 [Apis
mellifera]
Length = 358
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K+FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 143 TELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 201
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 202 KEVDVKKATPK 212
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +GD++ + D +T RSRGF FI F +++D ++A G+ + + K
Sbjct: 69 ELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAAGDHV------INNK 122
Query: 97 KAEPKK 102
K +PKK
Sbjct: 123 KVDPKK 128
>gi|1465873|dbj|BAA07211.1| Bmsqd-2 [Bombyx mori]
Length = 303
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
+E + DE ++FF +FG + E ++ D + ++ +GF FITF++EQ V+DLL K K + G
Sbjct: 132 SEISDDEIRNFFSEFGTILEVEMPFDKTKNQRKGFCFITFESEQVVNDLL-KTPKRTIGG 190
Query: 91 AQVEVKKAEPK 101
+V+VK+A PK
Sbjct: 191 KEVDVKRATPK 201
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 34/66 (51%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F + +++ + +T RSRGF FI F +++D ++A G + K
Sbjct: 58 ELRDHFGAYREIESINVKTVPNTGRSRGFAFIVFKAPESIDKVMAAGEHT------INNK 111
Query: 97 KAEPKK 102
K +PKK
Sbjct: 112 KVDPKK 117
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ + FF QFG V E + D +T R RGFGF+ FD+E V D L + + ++ G VEV
Sbjct: 120 DDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVV-DRLCQIHFHQINGKTVEV 178
Query: 96 KKAEPK 101
KKAEP+
Sbjct: 179 KKAEPR 184
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D K +F ++G+V + IM+D T R RGFGF+TF + +V++++ G L
Sbjct: 22 ETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEEVMKNGPHT-LDNK 80
Query: 92 QVEVKKAEPKKPNLP 106
++ K A K P
Sbjct: 81 TIDPKPATMKSATPP 95
>gi|1094717|prf||2106321A stage-specific activator protein
Length = 404
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 1/62 (1%)
Query: 40 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
+ F G+V++ IM D T + RGFGF+T D+E+AV+ L+ + + LEL G +E+KKA+
Sbjct: 117 ELFRSHGNVEDVHIMNDTDTGKHRGFGFVTLDSEEAVEKLV-RMHHLELKGKSMEIKKAQ 175
Query: 100 PK 101
PK
Sbjct: 176 PK 177
>gi|340729954|ref|XP_003403258.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
terrestris]
Length = 314
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 143 TELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 201
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 202 KEVDVKKATPK 212
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +GD++ + D +T RSRGF FI F +++D ++A G+ + + K
Sbjct: 69 ELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAAGDHI------INNK 122
Query: 97 KAEPKK 102
K +PKK
Sbjct: 123 KVDPKK 128
>gi|350396363|ref|XP_003484529.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
impatiens]
Length = 314
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 143 TELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 201
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 202 KEVDVKKATPK 212
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +GD++ + D +T RSRGF FI F +++D ++A G+ + + K
Sbjct: 69 ELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAAGDHI------INNK 122
Query: 97 KAEPKK 102
K +PKK
Sbjct: 123 KVDPKK 128
>gi|332027282|gb|EGI67366.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 306
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K+FF QFG++ E ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 136 TELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 194
Query: 91 AQVEVKKAEPK 101
V+VKKA PK
Sbjct: 195 KAVDVKKATPK 205
Score = 42.4 bits (98), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E ++ F +GD++ + D +T RSRGF FI F +A+D +++ G+ + + K
Sbjct: 62 ELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSAGDHV------INNK 115
Query: 97 KAEPKK 102
K +PKK
Sbjct: 116 KVDPKK 121
>gi|307211208|gb|EFN87408.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 331
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K FF QFG++ E ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 137 TELSDDDIKHFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 195
Query: 91 AQVEVKKAEPK 101
V+VKKA PK
Sbjct: 196 KAVDVKKATPK 206
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +GD++ + D +T RSRGF FI F +A+D +++ G+ + + K
Sbjct: 63 ELRDHFNTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKIMSAGDHV------INNK 116
Query: 97 KAEPKK 102
K +PKK
Sbjct: 117 KVDPKK 122
>gi|350396366|ref|XP_003484530.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Bombus
impatiens]
Length = 362
Score = 60.5 bits (145), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 143 TELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 201
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 202 KEVDVKKATPK 212
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +GD++ + D +T RSRGF FI F +++D ++A G+ + + K
Sbjct: 69 ELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAAGDHI------INNK 122
Query: 97 KAEPKK 102
K +PKK
Sbjct: 123 KVDPKK 128
>gi|340729952|ref|XP_003403257.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Bombus
terrestris]
Length = 362
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K FF QFG + E ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 143 TELSDDDIKHFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 201
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 202 KEVDVKKATPK 212
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +GD++ + D +T RSRGF FI F +++D ++A G+ + + K
Sbjct: 69 ELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMAAGDHI------INNK 122
Query: 97 KAEPKK 102
K +PKK
Sbjct: 123 KVDPKK 128
>gi|256080846|ref|XP_002576687.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 315
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK- 85
LTP+T A + KDF+ Q+G++ + +M+D T+RSRGFGFIT+ + VD A+ N+
Sbjct: 24 LTPLTTEA--KLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD--AAQANRP 79
Query: 86 LELAGAQVEVKKAEPKK 102
E+ G VE K+A P++
Sbjct: 80 HEIDGKTVEAKRAMPRE 96
Score = 37.4 bits (85), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLEL 88
VT E +++F ++G++ E +++ + SRGFGF+TFD VD +L K + +
Sbjct: 119 VTHE---ELREYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPH--HI 173
Query: 89 AGAQVEVKKAEPKK 102
++ +VKKA K+
Sbjct: 174 GSSRADVKKALSKE 187
>gi|353232562|emb|CCD79917.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 315
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK- 85
LTP+T A + KDF+ Q+G++ + +M+D T+RSRGFGFIT+ + VD A+ N+
Sbjct: 24 LTPLTTEA--KLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD--AAQANRP 79
Query: 86 LELAGAQVEVKKAEPKK 102
E+ G VE K+A P++
Sbjct: 80 HEIDGKTVEAKRAMPRE 96
Score = 37.0 bits (84), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 6/74 (8%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLEL 88
VT E +++F ++G++ E +++ + SRGFGF+TFD VD +L K + +
Sbjct: 119 VTHE---ELREYFSKYGNITECEVVAWKESGESRGFGFVTFDDYDPVDKAILYKPH--HI 173
Query: 89 AGAQVEVKKAEPKK 102
++ +VKKA K+
Sbjct: 174 GSSRADVKKALSKE 187
>gi|29841163|gb|AAP06176.1| SJCHGC06206 protein [Schistosoma japonicum]
gi|226473310|emb|CAX71341.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473312|emb|CAX71342.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473314|emb|CAX71343.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473318|emb|CAX71345.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 313
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 51/77 (66%), Gaps = 5/77 (6%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK- 85
LTP+T A + KDF+ Q+G++ + +M+D T+RSRGFGFIT+ + VD A+ N+
Sbjct: 24 LTPLTTEA--KLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD--AAQANRP 79
Query: 86 LELAGAQVEVKKAEPKK 102
E+ G VE K+A P++
Sbjct: 80 HEIDGKTVEAKRAMPRE 96
>gi|393235474|gb|EJD43029.1| RNA-binding domain-containing protein [Auricularia delicata
TFB-10046 SS5]
Length = 351
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 13 INRQT--TTQKMT--GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFI 68
I RQ TQK+ GL+ T TE + +F QFG V + +M D +SRS+GFGF+
Sbjct: 73 IPRQEHHRTQKLFVGGLAPTVTTE----SLRAYFAQFGKVVDATVMVDRDSSRSKGFGFV 128
Query: 69 TFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
TF+ ++ LL G+ LE+ G ++VK A+P+
Sbjct: 129 TFEDIDNIERLLGLGH-LEIDGKMIDVKLAQPR 160
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 43/68 (63%), Gaps = 4/68 (5%)
Query: 36 DE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVE 94
DE +++F QFG V IMRD T RSRGF F+TF+ AV+ ++ + + L+ G ++
Sbjct: 12 DEGLRNYFSQFGKVDACTIMRDQ-TGRSRGFAFLTFEDPAAVNAVMVREHYLD--GKIID 68
Query: 95 VKKAEPKK 102
K+A P++
Sbjct: 69 PKRAIPRQ 76
>gi|392578419|gb|EIW71547.1| hypothetical protein TREMEDRAFT_56482 [Tremella mesenterica DSM
1558]
Length = 223
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 38/66 (57%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D +D FMQFG V + +M+D T RSRGFGF+TF T + + + + N+ L G + V
Sbjct: 18 DTLRDAFMQFGQVLDSIVMKDRETGRSRGFGFVTFSTAEEAEISIQQMNEQPLDGRNIRV 77
Query: 96 KKAEPK 101
A K
Sbjct: 78 NMANAK 83
>gi|357144334|ref|XP_003573255.1| PREDICTED: uncharacterized protein LOC100824407 [Brachypodium
distachyon]
Length = 226
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 45/65 (69%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ KD F +FG V E +++ D + RSRGFGF+TFD ++A+++ + N ++L G + V+
Sbjct: 22 DLKDAFGKFGRVTETKVVLDKYSGRSRGFGFVTFDDKKAMEEAVEAMNGIDLDGRNITVE 81
Query: 97 KAEPK 101
+A+P+
Sbjct: 82 RAQPQ 86
>gi|269063712|emb|CAS85141.1| squid, variant B [Blattella germanica]
Length = 317
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
V + + D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K +
Sbjct: 147 VPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQSIN 205
Query: 90 GAQVEVKKAEPK 101
G +V+VKKA PK
Sbjct: 206 GKEVDVKKATPK 217
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +G+++ + D +T RSRGF FI F ++D +L+ G+ + + K
Sbjct: 74 ELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSAGDHV------INNK 127
Query: 97 KAEPKK 102
K +PKK
Sbjct: 128 KVDPKK 133
>gi|269063710|emb|CAS85140.1| squid, variant A [Blattella germanica]
Length = 341
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
V + + D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K +
Sbjct: 147 VPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQSIN 205
Query: 90 GAQVEVKKAEPK 101
G +V+VKKA PK
Sbjct: 206 GKEVDVKKATPK 217
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +G+++ + D +T RSRGF FI F ++D +L+ G+ + + K
Sbjct: 74 ELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSAGDHV------INNK 127
Query: 97 KAEPKK 102
K +PKK
Sbjct: 128 KVDPKK 133
>gi|115456445|ref|NP_001051823.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|40714682|gb|AAR88588.1| putative RNA binding protein [Oryza sativa Japonica Group]
gi|108711961|gb|ABF99756.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711962|gb|ABF99757.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711963|gb|ABF99758.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|108711964|gb|ABF99759.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113550294|dbj|BAF13737.1| Os03g0836200 [Oryza sativa Japonica Group]
gi|125546344|gb|EAY92483.1| hypothetical protein OsI_14220 [Oryza sativa Indica Group]
gi|125588547|gb|EAZ29211.1| hypothetical protein OsJ_13272 [Oryza sativa Japonica Group]
gi|215695067|dbj|BAG90258.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215715212|dbj|BAG94963.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215764998|dbj|BAG86695.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 205
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
KD F +FG++ E +++ D + RSRGFGF+TFD ++A++D + N L+L G + V K
Sbjct: 23 LKDAFGKFGNLTEAKVVFDKYSGRSRGFGFVTFDEKKAMEDAIEGMNGLDLDGRAITVDK 82
Query: 98 AEPKKP 103
A+P+ P
Sbjct: 83 AQPQGP 88
>gi|269063714|emb|CAS85142.1| squid, variant C [Blattella germanica]
Length = 318
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
V + + D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K +
Sbjct: 147 VPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQSIN 205
Query: 90 GAQVEVKKAEPK 101
G +V+VKKA PK
Sbjct: 206 GKEVDVKKATPK 217
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +G+++ + D +T RSRGF FI F ++D +L+ G+ + + K
Sbjct: 74 ELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSAGDHV------INNK 127
Query: 97 KAEPKK 102
K +PKK
Sbjct: 128 KVDPKK 133
>gi|383851133|ref|XP_003701094.1| PREDICTED: RNA-binding protein squid-like isoform 1 [Megachile
rotundata]
Length = 338
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + ++ K+FF QFG + + ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 143 TELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 201
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 202 KEVDVKKATPK 212
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +GD++ + D +T RSRGF FI F +++D +++ + + + G +V+ K
Sbjct: 69 ELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMSANDHI-INGKKVDPK 127
Query: 97 KAEPK 101
KA+ +
Sbjct: 128 KAKAR 132
>gi|269063720|emb|CAS85145.1| squid, variant F [Blattella germanica]
Length = 297
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
V + + D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K +
Sbjct: 147 VPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQSIN 205
Query: 90 GAQVEVKKAEPK 101
G +V+VKKA PK
Sbjct: 206 GKEVDVKKATPK 217
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +G+++ + D +T RSRGF FI F ++D +L+ G+ + + K
Sbjct: 74 ELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSAGDHV------INNK 127
Query: 97 KAEPKK 102
K +PKK
Sbjct: 128 KVDPKK 133
>gi|269063718|emb|CAS85144.1| squid, variant E [Blattella germanica]
Length = 321
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 1/72 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
V + + D+ K FF Q+G + E ++ D + ++ +GF FITF++EQ V +LL K K +
Sbjct: 147 VPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQVVQELL-KSPKQSIN 205
Query: 90 GAQVEVKKAEPK 101
G +V+VKKA PK
Sbjct: 206 GKEVDVKKATPK 217
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +G+++ + D +T RSRGF FI F ++D +L+ G+ + + K
Sbjct: 74 ELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKVLSAGDHV------INNK 127
Query: 97 KAEPKK 102
K +PKK
Sbjct: 128 KVDPKK 133
>gi|328709829|ref|XP_001950969.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 349
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%), Gaps = 5/74 (6%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D K+FF Q+G++ + +M+D T RSRGFGFIT+ VD ++ ++ G +VE
Sbjct: 24 DSLKEFFEQWGEIVDVVVMKDPQTKRSRGFGFITYSQSSMVDQAMS-NRPHKIDGREVET 82
Query: 96 KKAEPK----KPNL 105
K+A P+ KP++
Sbjct: 83 KRAVPRDDIDKPDI 96
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 44/70 (62%), Gaps = 3/70 (4%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLEL 88
+ E + ++ ++F +FG++ I+ D + + +GFGFI +D +VD +L K + ++
Sbjct: 108 IKEQSENDLLEYFGKFGNITNVTIVTDKDSGQRKGFGFIEYDDTDSVDKAVLIKSH--QV 165
Query: 89 AGAQVEVKKA 98
AG +++VKKA
Sbjct: 166 AGGKLDVKKA 175
>gi|156554677|ref|XP_001600539.1| PREDICTED: RNA-binding protein squid-like [Nasonia vitripennis]
Length = 338
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + D+ K FF QFG + + ++ D + ++ +GF FITF++EQ ++LL K +K ++G
Sbjct: 145 TELSDDDIKTFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVANELL-KTSKQTISG 203
Query: 91 AQVEVKKAEPK 101
+VEVKKA P+
Sbjct: 204 KEVEVKKATPR 214
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F FGD++ + D +T RSRGF FI F +++D +A G+ + + K
Sbjct: 71 ELRDHFSTFGDIESINVKTDPTTGRSRGFAFIVFAKAESLDKAMAHGDHI------INNK 124
Query: 97 KAEPKK 102
K +PKK
Sbjct: 125 KVDPKK 130
>gi|125532323|gb|EAY78888.1| hypothetical protein OsI_33991 [Oryza sativa Indica Group]
Length = 305
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 54 MRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 104
M D +T R RGFGFITFD E AVD +L K +L+G VEVK+A P++ N
Sbjct: 1 MYDQNTQRPRGFGFITFDAEDAVDRVLHK-TFHDLSGKMVEVKRALPREAN 50
>gi|383851135|ref|XP_003701095.1| PREDICTED: RNA-binding protein squid-like isoform 2 [Megachile
rotundata]
Length = 362
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + ++ K+FF QFG + + ++ D + ++ +GF FITF++EQ V++LL K K + G
Sbjct: 143 TELSDEDIKNFFSQFGTIVDVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTING 201
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 202 KEVDVKKATPK 212
Score = 41.2 bits (95), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F +GD++ + D +T RSRGF FI F +++D +++ + + + G +V+ K
Sbjct: 69 ELRDHFGTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMSANDHI-INGKKVDPK 127
Query: 97 KAEPK 101
KA+ +
Sbjct: 128 KAKAR 132
>gi|358334791|dbj|GAA32408.2| heterogeneous nuclear ribonucleoprotein A1/A3 [Clonorchis sinensis]
Length = 340
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 48/77 (62%), Gaps = 5/77 (6%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 86
LTP T + KDF+ Q+G++ + +M+D + RSRGFGFIT+ + VD A+ N+
Sbjct: 24 LTPQTTETM--LKDFYSQWGEIVDVVVMKDSVSHRSRGFGFITYKEPEMVD--AAQANRP 79
Query: 87 -ELAGAQVEVKKAEPKK 102
E+ G VE K+A P++
Sbjct: 80 HEIDGKTVEAKRAMPRE 96
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVE 94
DE +D+F ++G++ + +I+ T SRGFGF+TFD VD +L K + + ++ +
Sbjct: 122 DELRDYFSKYGNIVDCEIVTWKETGESRGFGFVTFDDYDPVDKAILYKPH--HIGSSRAD 179
Query: 95 VKKA 98
VKKA
Sbjct: 180 VKKA 183
>gi|116787034|gb|ABK24349.1| unknown [Picea sitchensis]
Length = 264
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 54 MRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
M DH+T R RGFGFIT+D+E AVD +L + +L VEVK+A PK
Sbjct: 1 MYDHTTQRHRGFGFITYDSEDAVDKVLQQ-TFHQLKEKTVEVKRAIPK 47
>gi|270001992|gb|EEZ98439.1| hypothetical protein TcasGA2_TC000928 [Tribolium castaneum]
Length = 344
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ K+FF Q+G + E ++ D + ++ +GF FITF++EQ V++LL K K + +V+V
Sbjct: 153 DDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTIKDKEVDV 211
Query: 96 KKAEPK 101
KKA PK
Sbjct: 212 KKATPK 217
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F Q+G+++ + D +T RSRGF FI F+ +A+D ++A G + + K
Sbjct: 74 ELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVAAGEHI------INNK 127
Query: 97 KAEPKK 102
K +PKK
Sbjct: 128 KVDPKK 133
>gi|91076876|ref|XP_976197.1| PREDICTED: similar to Bmsqd-2 isoform 3 [Tribolium castaneum]
Length = 323
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 45/66 (68%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ K+FF Q+G + E ++ D + ++ +GF FITF++EQ V++LL K K + +V+V
Sbjct: 153 DDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITFESEQVVNELL-KTPKQTIKDKEVDV 211
Query: 96 KKAEPK 101
KKA PK
Sbjct: 212 KKATPK 217
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E +D F Q+G+++ + D +T RSRGF FI F+ +A+D ++A G + + K
Sbjct: 74 ELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKVVAAGEHI------INNK 127
Query: 97 KAEPKK 102
K +PKK
Sbjct: 128 KVDPKK 133
>gi|255571230|ref|XP_002526565.1| Circumsporozoite protein precursor, putative [Ricinus communis]
gi|223534126|gb|EEF35843.1| Circumsporozoite protein precursor, putative [Ricinus communis]
Length = 281
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 54 MRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 104
M D T R RGFGFITFD E AVD +L K EL G VEVK+A PK N
Sbjct: 1 MFDQQTQRPRGFGFITFDAEDAVDRVLHKVFH-ELNGKLVEVKRALPKDAN 50
>gi|224110618|ref|XP_002315580.1| predicted protein [Populus trichocarpa]
gi|222864620|gb|EEF01751.1| predicted protein [Populus trichocarpa]
Length = 459
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 52/88 (59%), Gaps = 5/88 (5%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++ +D+F Q+GDV + +M+D +T R RGFGF+ F + AV D++ + +K + G
Sbjct: 16 ETSEEKLRDYFGQYGDVLQAVVMKDKTTGRPRGFGFVVF-ADPAVLDMVLQ-DKHTIDGR 73
Query: 92 QVEVKKAEPKKPNLPQPSYRRYNNPKPA 119
VE K+A ++ Q + R N PA
Sbjct: 74 MVEAKRALSRE---EQQTNARAGNLNPA 98
>gi|401401445|ref|XP_003881013.1| hypothetical protein NCLIV_040540 [Neospora caninum Liverpool]
gi|325115425|emb|CBZ50980.1| hypothetical protein NCLIV_040540 [Neospora caninum Liverpool]
Length = 434
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 48/79 (60%), Gaps = 6/79 (7%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS + T D + +F Q+GDV + +++ D T RSRGFGFITF T + V +
Sbjct: 127 GLSRSTTT----DSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPEPVSRVADMR 182
Query: 84 NKLELAGAQVEVKKAEPKK 102
+ ++ G QVEV++A P++
Sbjct: 183 HTVD--GTQVEVRRAIPRE 199
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+++ DE + +F +G++Q +M D +R RGFGF+ F + + KL
Sbjct: 221 ISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGPHKKL-- 278
Query: 89 AGAQVEVKKAEPKKPN 104
G E K+A+P++ N
Sbjct: 279 -GVHCEAKRAQPRQMN 293
>gi|157108578|ref|XP_001650293.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108879258|gb|EAT43483.1| AAEL005049-PA [Aedes aegypti]
Length = 287
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 3/75 (4%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 86
L+P E + +E K FF QFG+V E ++ D ++ +GF FIT+D+E V +LL K K
Sbjct: 114 LSP--ETSDEEVKTFFEQFGNVVEMEMPFDKMKNQRKGFCFITYDSEAVVTELL-KTPKQ 170
Query: 87 ELAGAQVEVKKAEPK 101
+ G +V+VK+A PK
Sbjct: 171 TVGGKEVDVKRATPK 185
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++ F Q+G+++ + D T RSRGF FI F++ +++D ++A
Sbjct: 37 ETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRGFAFIIFNSPESIDKVVA------FEDH 90
Query: 92 QVEVKKAEPKK 102
V KK +PKK
Sbjct: 91 TVNGKKVDPKK 101
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 42/67 (62%), Gaps = 3/67 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE 94
+ K +F Q+G++ + +M+D T RSRGFGFIT+ VDD A+ +K++ G VE
Sbjct: 22 ENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFITYAAAHMVDDAQGARPHKID--GRTVE 79
Query: 95 VKKAEPK 101
K+A PK
Sbjct: 80 PKRAVPK 86
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 93/204 (45%), Gaps = 18/204 (8%)
Query: 17 TTTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAV 76
T + GL +TE L K++F +G+V ++ T + RGFGF+ FD V
Sbjct: 97 TVKKLFVGLLNDSITEEDL---KEYFSPYGNVTSAALVVHKETGKKRGFGFVEFDDYDPV 153
Query: 77 DDLLAKGNKLELAGAQVEVKKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYG------G 130
D + KG+ + + G +++VKKA K+ + + + R +N +GS +A+ G
Sbjct: 154 DKICLKGSHI-IKGKKIDVKKALSKE-EMARVNARNNSNSADNWGSDNRNAWEPTMRNFG 211
Query: 131 YGGGGFAGGG-----FGGSGGGGGGGGYRSSGAYGVRGGGY-GGYGVGGEFGGYGGYGGG 184
GGG +G G S GG GG +S GY +G G G G GG
Sbjct: 212 RGGGWRSGNDPDPWESGPSSRGGNWGGPSTSAWDNSFSDGYQQSFGAGPIRGSNGPLRGG 271
Query: 185 MGAYRGEPSSLGYSGRYGGFNRGY 208
GA R P + G+ Y F+ G+
Sbjct: 272 -GAARPGPYNSGFDSGYNDFSSGF 294
>gi|195144350|ref|XP_002013159.1| GL23974 [Drosophila persimilis]
gi|194102102|gb|EDW24145.1| GL23974 [Drosophila persimilis]
Length = 341
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 1/74 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE + +E + +F QFG++ E ++ D S+ F FIT D+EQ V DLL K + +++
Sbjct: 144 TEISDEEIQTYFSQFGNIVEVEMPFDKQKSQRTDFCFITLDSEQVVTDLL-KTSIQKISV 202
Query: 91 AQVEVKKAEPKKPN 104
+V+VK+A PK N
Sbjct: 203 KEVDVKRATPKPEN 216
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 6/71 (8%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E E +D F +FG+++ + D T RSRGF FI F +A+D + + G +
Sbjct: 65 ETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKVSSAGEHI----- 119
Query: 92 QVEVKKAEPKK 102
+ KK +PKK
Sbjct: 120 -INSKKVDPKK 129
>gi|799015|emb|CAA89058.1| putative glycine rich RNA binding protein [Solanum tuberosum]
Length = 175
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
D F Q+ +V E +I+ D T RSRGFGF+TF EQA+ D + N+ +L G + V +
Sbjct: 22 LSDAFSQYAEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNRQDLDGRNITVNE 81
Query: 98 AEPK 101
A+ +
Sbjct: 82 AQSR 85
>gi|115489714|ref|NP_001067344.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|77557139|gb|ABA99935.1| Glycine-rich RNA-binding protein GRP1A, putative, expressed [Oryza
sativa Japonica Group]
gi|113649851|dbj|BAF30363.1| Os12g0632000 [Oryza sativa Japonica Group]
gi|125580173|gb|EAZ21319.1| hypothetical protein OsJ_36973 [Oryza sativa Japonica Group]
gi|215769456|dbj|BAH01685.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 162
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F FG++ E +I+ D T RSRGFGF+TF +EQA+ D + N EL G + V +A+ +
Sbjct: 28 FSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
Query: 102 K 102
+
Sbjct: 88 R 88
>gi|345108301|emb|CBZ41969.1| deleted in azoospermia (Daz)-associated protein 1 [Botryllus
schlosseri]
Length = 333
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+E K +F Q+G V E + + +R +GFGF+TF++E AVD + K + E+ G +VE
Sbjct: 117 EEVKAYFSQYGSVTEVVFVINKEENRHKGFGFVTFESESAVDQAVGK-HFHEICGKRVEA 175
Query: 96 KKAEPKK 102
K+A P++
Sbjct: 176 KRATPRE 182
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D + F +G++ E +MRD T SRGFGF+ + AV ++L K L
Sbjct: 18 ETTDDMLRQHFSNYGEIVECIVMRDKLTQMSRGFGFVKYADAGAVAEVL-KNRPHTLDNK 76
Query: 92 QVEVKKAEPK 101
+++ K PK
Sbjct: 77 KIDPKPCTPK 86
>gi|2624326|emb|CAA05728.1| OsGRP1 [Oryza sativa Japonica Group]
Length = 160
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F FG++ E +I+ D T RSRGFGF+TF +EQA+ D + N EL G + V +A+ +
Sbjct: 28 FSTFGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
Query: 102 K 102
+
Sbjct: 88 R 88
>gi|125575106|gb|EAZ16390.1| hypothetical protein OsJ_31855 [Oryza sativa Japonica Group]
Length = 463
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E ++ +D F +GDV + +MRD T R RGFGF+ F +VD L + L+ G
Sbjct: 16 ETTEEKLRDHFAAYGDVSQAAVMRDKLTGRPRGFGFVVFSDPSSVDAALVDPHTLD--GR 73
Query: 92 QVEVKKA 98
V+VK+A
Sbjct: 74 TVDVKRA 80
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
DEF+ +F +G V + +M D +T R RG E AVD +L K +L+G VEV
Sbjct: 142 DEFRQYFQTYGVVTDVVVMYDQNTQRPRG-SVHHLRREDAVDRVLHKTFH-DLSGKMVEV 199
Query: 96 KKAEPKKPN 104
K+A P++ N
Sbjct: 200 KRALPREAN 208
>gi|242024531|ref|XP_002432681.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518151|gb|EEB19943.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 295
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
E + ++ ++FF QFG + E ++ D ++ + F FITF++EQ +DLL K K + G
Sbjct: 122 VETSEEDIRNFFGQFGTILEVELPFDKQKNQQKNFCFITFESEQVTNDLL-KQPKQTING 180
Query: 91 AQVEVKKAEPK 101
+V+VKKA PK
Sbjct: 181 KEVDVKKANPK 191
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 6/66 (9%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E ++ F QFG+++ + D ++ RSRGF FI F ++++ ++A G+ + + K
Sbjct: 48 ELREHFSQFGEIESVSVKTDPASGRSRGFAFIVFKDVESIEKVMAAGDHI------INCK 101
Query: 97 KAEPKK 102
K +PKK
Sbjct: 102 KIDPKK 107
>gi|353235522|emb|CCA67534.1| related to glycine-rich RNA-binding protein [Piriformospora indica
DSM 11827]
Length = 236
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++ F Q+G+V + +MRD T RSRGFGF+T+ +E+ + ++ N+ L G Q++V
Sbjct: 17 DTLREAFRQYGNVVDSIVMRDRETGRSRGFGFVTYSSEEEASNAISGLNETSLDGRQIKV 76
Query: 96 KKAEPK 101
A +
Sbjct: 77 NLANAR 82
>gi|158296283|ref|XP_001237856.2| AGAP006668-PA [Anopheles gambiae str. PEST]
gi|157016437|gb|EAU76642.2| AGAP006668-PA [Anopheles gambiae str. PEST]
Length = 360
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+E K FF QFG + E ++ D ++ +GF FIT+++ Q V++LL K K +AG +V+V
Sbjct: 162 EEIKTFFGQFGTIVEVELPFDKQKNQRKGFCFITYESVQVVNELL-KTPKQTIAGKEVDV 220
Query: 96 KKAEPK 101
KKA PK
Sbjct: 221 KKATPK 226
Score = 37.7 bits (86), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ ++ F Q+G+++ + D +T RSRGF FI + ++D ++A G + L +V+ K
Sbjct: 83 DLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASDSIDKVVAAGEHV-LNNKKVDPK 141
Query: 97 KAE 99
+A+
Sbjct: 142 RAK 144
>gi|359475330|ref|XP_003631658.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Vitis
vinifera]
Length = 162
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F QFG++ E +I+ D T RSRGFGF+TF +EQ++ D + N L G + V +A+
Sbjct: 28 FSQFGEILESKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGQNLDGRNITVNEAQ 85
>gi|2331133|gb|AAB66885.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 161
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +G++ E +I+ D T RSRGFGF+TF +EQA+ D + N EL G + V +A+ +
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
Query: 102 K 102
+
Sbjct: 88 R 88
>gi|221480563|gb|EEE19030.1| hypothetical protein TGGT1_105690 [Toxoplasma gondii GT1]
gi|221505534|gb|EEE31179.1| RNA-binding protein, putative [Toxoplasma gondii VEG]
Length = 430
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS + T D + +F Q+GDV + +++ D T RSRGFGFITF T V +
Sbjct: 129 GLSRSTTT----DSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPVARVADMR 184
Query: 84 NKLELAGAQVEVKKAEPKK 102
+ ++ G QVEV++A P++
Sbjct: 185 HTVD--GTQVEVRRAIPRE 201
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+++ DE + +F +G++Q +M D +R RGFGF+ F + + KL
Sbjct: 223 ISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGSHKKL-- 280
Query: 89 AGAQVEVKKAEPKKPN 104
G E K+A+P++ N
Sbjct: 281 -GVHCEAKRAQPRQSN 295
>gi|237838585|ref|XP_002368590.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
gi|211966254|gb|EEB01450.1| heterogeneous nuclear ribonucleoprotein A3, putative [Toxoplasma
gondii ME49]
Length = 430
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS + T D + +F Q+GDV + +++ D T RSRGFGFITF T V +
Sbjct: 129 GLSRSTTT----DSLRTYFQQYGDVADSEVLFDKFTGRSRGFGFITFTTPDPVARVADMR 184
Query: 84 NKLELAGAQVEVKKAEPKK 102
+ ++ G QVEV++A P++
Sbjct: 185 HTVD--GTQVEVRRAIPRE 201
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+++ DE + +F +G++Q +M D +R RGFGF+ F + + KL
Sbjct: 223 ISDDVNDESLRAYFRHYGEIQSANVMVDRQNNRPRGFGFVIFRNPDDAEKAIGSHKKL-- 280
Query: 89 AGAQVEVKKAEPKKPN 104
G E K+A+P++ N
Sbjct: 281 -GVHCEAKRAQPRQSN 295
>gi|169244425|gb|ACA50486.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|306415963|gb|ADM86856.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|385718874|gb|AFI71864.1| Glycin-rich RNA binding protein [Oryza sativa]
Length = 161
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +G++ E +I+ D T RSRGFGF+TF +EQA+ D + N EL G + V +A+ +
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
Query: 102 K 102
+
Sbjct: 88 R 88
>gi|125537516|gb|EAY84004.1| hypothetical protein OsI_39235 [Oryza sativa Indica Group]
Length = 161
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +G++ E +I+ D T RSRGFGF+TF +EQA+ D + N EL G + V +A+ +
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQSR 87
Query: 102 K 102
+
Sbjct: 88 R 88
>gi|297802026|ref|XP_002868897.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
gi|297314733|gb|EFH45156.1| hypothetical protein ARALYDRAFT_490700 [Arabidopsis lyrata subsp.
lyrata]
Length = 164
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 38/58 (65%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F QFGDV + +I+ D T RSRGFGF+TF E+A+ D + + N EL G + V +A+
Sbjct: 26 FSQFGDVLDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRTITVNEAQ 83
>gi|353241965|emb|CCA73743.1| probable heterogeneous nuclear ribonucleoprotein HRP1
[Piriformospora indica DSM 11827]
Length = 343
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K++F QFG V + +M D +SRS+GFGF+TFD + + L L + G +EVK
Sbjct: 98 LKEYFGQFGKVIDATVMVDRDSSRSKGFGFVTFDDQSGAERLFGMPG-LAIDGKTIEVKM 156
Query: 98 AEPK 101
A+P+
Sbjct: 157 AQPR 160
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D +++F QFG V+ IMRD + RSRGF F+TF+ AV+ ++ + + L+ G ++
Sbjct: 13 DGLRNYFSQFGRVEACTIMRDPA-GRSRGFAFLTFEDPAAVNKVMVQEHYLD--GKIIDP 69
Query: 96 KKAEPK 101
K+A P+
Sbjct: 70 KRAIPR 75
>gi|356538787|ref|XP_003537882.1| PREDICTED: glycine-rich RNA-binding protein GRP1A-like [Glycine
max]
Length = 170
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 41/66 (62%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F +GD+ E +++ D T RSRGFGF+TF +EQ++ D +A N +L G + V
Sbjct: 22 DALEKAFSIYGDIVESKVINDRETGRSRGFGFVTFASEQSMKDAIAGMNGQDLDGRNITV 81
Query: 96 KKAEPK 101
+A+ +
Sbjct: 82 NEAQTR 87
>gi|45553351|ref|NP_996203.1| squid, isoform D [Drosophila melanogaster]
gi|25009944|gb|AAN71139.1| GH03391p [Drosophila melanogaster]
gi|27820015|gb|AAO25040.1| HL05737p [Drosophila melanogaster]
gi|45446475|gb|AAS65146.1| squid, isoform D [Drosophila melanogaster]
Length = 178
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/49 (53%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 56 DHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKKPN 104
D S+ +GF FITFD+EQ V DLL K K ++AG +V+VK+A PK N
Sbjct: 4 DKQKSQRKGFCFITFDSEQVVTDLL-KTPKQKIAGKEVDVKRATPKPEN 51
>gi|356517068|ref|XP_003527212.1| PREDICTED: uncharacterized protein LOC100777821 [Glycine max]
Length = 182
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F QFG++ E +++ D T RSRGFGF+TF TEQA+ D + N L G + V
Sbjct: 22 DALEKAFSQFGEIVESKVINDRETGRSRGFGFVTFATEQAMRDAIEGMNGQNLDGRNITV 81
Query: 96 KKAEP 100
+A+
Sbjct: 82 NEAQS 86
>gi|311698159|gb|ADQ00374.1| glycine-rich RNA-binding protein [Sequoia sempervirens]
Length = 194
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 38/64 (59%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
D F FG+V E +I+ D T RSRGFGF+TF EQA+ D + N EL G + V +
Sbjct: 24 LHDAFSPFGEVLESKIVSDRETGRSRGFGFVTFSDEQAMMDAIEAMNGKELDGRNITVNQ 83
Query: 98 AEPK 101
A+ +
Sbjct: 84 AQSR 87
>gi|115529229|dbj|BAF34340.1| putative glycine-rich RNA-binding protein [Dianthus caryophyllus]
Length = 163
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F +FG+V + +I+ D T RSRGFGF+TF EQ++ D + + N EL G + V +A+
Sbjct: 26 FNKFGEVTDSKIINDRETGRSRGFGFVTFANEQSMRDAIDEMNGKELDGRSITVNEAQ 83
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F Q+G+V + +MRD ST +SRGFGFITF VDD A ++ G +VE K+A P+
Sbjct: 34 FEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHMVDDAQA-ARPHKVDGREVEPKRAVPR 92
Query: 102 K 102
+
Sbjct: 93 E 93
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ +D+F QFG++ ++ + T R RGF F+ +D VD ++ K + + L G + EVK
Sbjct: 120 DLRDYFSQFGNILSVNLVTEKDTGRKRGFAFVEYDDYDPVDKIVLKRHHM-LKGKRTEVK 178
Query: 97 KAEPKK 102
KA K+
Sbjct: 179 KALSKQ 184
>gi|342879144|gb|EGU80408.1| hypothetical protein FOXB_09084 [Fusarium oxysporum Fo5176]
Length = 345
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 40/77 (51%), Gaps = 10/77 (12%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVE-- 94
E F ++GDV++ QIMRD T SRGFGF+ T + A+ K L G Q+E
Sbjct: 89 EVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKMVTSEQ-----AEAAKEGLQGEQIEGR 143
Query: 95 ---VKKAEPKKPNLPQP 108
++KA +P P P
Sbjct: 144 TLSIEKARRARPRTPTP 160
>gi|408391231|gb|EKJ70611.1| hypothetical protein FPSE_09121 [Fusarium pseudograminearum CS3096]
Length = 348
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVE-- 94
E F ++GDV++ QIMRD T SRGFGF+ V A+ K L G Q+E
Sbjct: 89 EVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKM-----VTSDQAEAAKEGLQGEQIEGR 143
Query: 95 ---VKKAEPKKPNLPQP 108
++KA +P P P
Sbjct: 144 TLSIEKARRARPRTPTP 160
>gi|82623423|gb|ABB87126.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 178
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F Q+G+V E +I+ D T RSRGFGF+TF EQA+ D + N +L G + V +A+
Sbjct: 26 FSQYGEVVESKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQS 84
>gi|80477437|gb|AAI08267.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
Length = 320
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VKGHNCEVRK 179
Query: 98 AEPKK 102
A PK+
Sbjct: 180 ALPKQ 184
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + ++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-NTTPHKVDGR 82
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 83 VVEPKRA 89
>gi|58761496|ref|NP_001011724.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|58761498|ref|NP_001011725.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|190356061|sp|Q32P51.2|RA1L2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1-like 2;
Short=hnRNP A1-like 2; AltName: Full=hnRNP core protein
A1-like 2
gi|119572426|gb|EAW52041.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
gi|119572427|gb|EAW52042.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
Length = 320
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VKGHNCEVRK 179
Query: 98 AEPKK 102
A PK+
Sbjct: 180 ALPKQ 184
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + ++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-NTTPHKVDGR 82
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 83 VVEPKRA 89
>gi|544416|sp|Q05966.1|GRP10_BRANA RecName: Full=Glycine-rich RNA-binding protein 10
gi|17819|emb|CAA78513.1| glycine-rich RNA binding protein [Brassica napus]
Length = 169
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
E + F QFG+V + +I+ D T RSRGFGF+TF E+++ D + + N EL G + V
Sbjct: 21 ELERTFSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMKDAIDEMNGKELDGRTITVN 80
Query: 97 KAEP 100
+A+
Sbjct: 81 EAQS 84
>gi|393911996|gb|EJD76540.1| RNA recognition domain-containing protein [Loa loa]
Length = 309
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 49/78 (62%), Gaps = 5/78 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS T T+ AL K+F+ Q+G++ + +MRD +T RSRGFGF++F + VD +A
Sbjct: 5 GLSAT-TTDEAL---KEFYSQWGELVDCIVMRDPATKRSRGFGFVSFSKQSEVDAAMAAR 60
Query: 84 NKLELAGAQVEVKKAEPK 101
+ + G V+ K+A P+
Sbjct: 61 PHV-IDGKTVDPKRAVPR 77
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F+D+F QFG V + +I+ D +T + RGF FI+FD VD + + + ++ + +VKK
Sbjct: 106 FEDYFSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKCVLQKSH-QIHNYRCDVKK 164
Query: 98 AEPKK 102
A K+
Sbjct: 165 ALSKE 169
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 39 KDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA 98
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + + +L G V+VKKA
Sbjct: 2725 RDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQ-KQHQLNGKMVDVKKA 2783
Query: 99 EPKK 102
PK+
Sbjct: 2784 LPKQ 2787
Score = 47.0 bits (110), Expect = 0.009, Method: Composition-based stats.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE
Sbjct: 2631 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEP 2689
Query: 96 KKAEPKK 102
K+A P++
Sbjct: 2690 KRAVPRQ 2696
>gi|432098521|gb|ELK28236.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 316
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
+ + +D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G
Sbjct: 115 DTEVHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGR 173
Query: 92 QVEVKKAEPKK 102
EV+KA PK+
Sbjct: 174 SCEVRKALPKQ 184
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + ++ ++RD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|389741761|gb|EIM82949.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 145
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F +FG + + +MRD T RSRGFGF+TF T + D + N+ EL G ++ V
Sbjct: 17 DTLRQAFSEFGAILDSIVMRDRETGRSRGFGFVTFGTPEEADAAINNLNEQELDGRRIRV 76
Query: 96 KKAEPK 101
A K
Sbjct: 77 NLANAK 82
>gi|15235002|ref|NP_195637.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
gi|544425|sp|Q03251.1|GRP8_ARATH RecName: Full=Glycine-rich RNA-binding protein 8; AltName:
Full=Protein CCR1
gi|16305|emb|CAA78712.1| glycine rich protein [Arabidopsis thaliana]
gi|166658|gb|AAA20201.1| ORF [Arabidopsis thaliana]
gi|166839|gb|AAA32854.1| RNA-binding protein [Arabidopsis thaliana]
gi|4914438|emb|CAB43641.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|7270909|emb|CAB80589.1| glycine-rich protein (clone AtGRP8) [Arabidopsis thaliana]
gi|222423067|dbj|BAH19515.1| AT4G39260 [Arabidopsis thaliana]
gi|332661644|gb|AEE87044.1| glycine-rich RNA-binding protein 8 [Arabidopsis thaliana]
Length = 169
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F QFGDV + +I+ D + RSRGFGF+TF E+A+ D + + N EL G + V +A+
Sbjct: 26 FSQFGDVIDSKIINDRESGRSRGFGFVTFKDEKAMRDAIEEMNGKELDGRVITVNEAQ 83
>gi|268553541|ref|XP_002634757.1| C. briggsae CBR-HRP-1 protein [Caenorhabditis briggsae]
Length = 337
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++F+ QFG++ + +MRD +T RSRGFGF+TF + VD + + + ++ G V+
Sbjct: 29 DLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEVDAAMKQPHVID--GKTVDP 86
Query: 96 KKAEPK 101
K+A P+
Sbjct: 87 KRAVPR 92
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 2/60 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
D+F ++G V + +I+ D +T + RGFGF+T D VD + + + + + G + +V+K
Sbjct: 121 LSDYFSKYGTVTKSEIILDKATQKPRGFGFVT-DDHDCVDQCVLQKSHM-VNGHRCDVRK 178
>gi|2267593|gb|AAB63589.1| glycine-rich RNA-binding protein [Oryza sativa Indica Group]
Length = 165
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +G++ E +I+ D T RSRGFGF+TF +EQA+ D + + EL G + V +A+ +
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMSGKELDGRNITVNEAQSR 87
Query: 102 K 102
+
Sbjct: 88 R 88
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + + +L G V+VKK
Sbjct: 133 LRDYFQNFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-QHQLKGKMVDVKK 191
Query: 98 AEPKKPNL 105
A PK+ ++
Sbjct: 192 ALPKQSDV 199
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE
Sbjct: 40 ENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEP 98
Query: 96 KKAEPKK 102
K+A P++
Sbjct: 99 KRAVPRQ 105
>gi|10799202|gb|AAG23220.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 170
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F FG V + +++ D T RSRGFGF+TF +EQ++ D + N EL G + V +A+
Sbjct: 28 FANFGQVLDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQS 86
>gi|156549026|ref|XP_001607355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Nasonia vitripennis]
Length = 371
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE 94
D K F Q+GD+ + +M+D T RSRGFGFIT+ VDD A+ ++++ G VE
Sbjct: 31 DSLKKHFEQWGDIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVD--GRVVE 88
Query: 95 VKKAEPKK 102
K+A P++
Sbjct: 89 PKRAVPRQ 96
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ + +F +G++ I+ D T + RGFGF+ FD VD + + N ++ G V+V
Sbjct: 122 DDLRVYFQGYGNINSVSIVTDKDTGKKRGFGFVEFDDYDPVDKICLQRNH-QIRGKHVDV 180
Query: 96 KKA 98
KKA
Sbjct: 181 KKA 183
>gi|544426|sp|Q03878.1|GRP1_DAUCA RecName: Full=Glycine-rich RNA-binding protein
gi|18347|emb|CAA41152.1| glycine-rich protein [Daucus carota]
gi|445138|prf||1908438A Gly-rich protein
Length = 157
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F QFGD+ + +I+ D T RSRGFGF+TF E+++ D + N EL G + V +A+
Sbjct: 26 FSQFGDITDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEGMNGQELDGRNITVNEAQS 84
>gi|308465164|ref|XP_003094843.1| CRE-HRP-1 protein [Caenorhabditis remanei]
gi|308246407|gb|EFO90359.1| CRE-HRP-1 protein [Caenorhabditis remanei]
Length = 344
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 30 VTEPALDEF-KDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE ++F+ QFG++ + +MRD +T RSRGFGF+TF + VD + + + +
Sbjct: 30 LTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTAKTEVDAAMKQRPHV-I 88
Query: 89 AGAQVEVKKAEPK 101
G V+ K+A P+
Sbjct: 89 DGKTVDPKRAVPR 101
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D D+F ++G+V + +I+ D +T + RGFGF+TFD +VD + + + + + G + +V
Sbjct: 128 DMLTDYFSKYGNVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHM-VNGHRCDV 186
Query: 96 KK 97
+K
Sbjct: 187 RK 188
>gi|544423|sp|Q99070.1|GRP2_SORBI RecName: Full=Glycine-rich RNA-binding protein 2
gi|21625|emb|CAA40862.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 168
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F FG V + +++ D T RSRGFGF+TF +EQ++ D + N EL G + V +A+
Sbjct: 28 FANFGQVIDSKVITDRETGRSRGFGFVTFSSEQSMLDAIENMNGKELDGRNITVNQAQS 86
>gi|46110044|ref|XP_382080.1| hypothetical protein FG01904.1 [Gibberella zeae PH-1]
Length = 342
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 10/77 (12%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVE-- 94
E F ++GDV++ QIMRD T SRGFGF+ V A+ K L G Q+E
Sbjct: 89 EVSKMFEKYGDVEKCQIMRDPHTKESRGFGFVKM-----VTSDQAEAAKEGLQGEQIEGR 143
Query: 95 ---VKKAEPKKPNLPQP 108
++KA +P P P
Sbjct: 144 TLSIEKARRARPRTPTP 160
>gi|432876614|ref|XP_004073060.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 302
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLAKGNKLELAGAQVE 94
+ ++F QFG V++ +I+ D T R RGFGF+ F DT+ A LAK + ++G +VE
Sbjct: 111 ENLTEYFSQFGRVEKSEIISDKQTGRKRGFGFVYFEDTDSATKAALAKYHT--ISGNKVE 168
Query: 95 VKKAEPKKP 103
VKKA K+
Sbjct: 169 VKKALTKQE 177
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ +++F +G+VQ I+ D +T + RGFGF+ FD VD + ++ G Q++V
Sbjct: 123 DQLREYFSNYGNVQNVSIVTDKATGKKRGFGFVEFDDYDPVDKVCLNA-PHKINGKQLDV 181
Query: 96 KKAEPK 101
KKA PK
Sbjct: 182 KKALPK 187
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQ-VEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ VDD A+ N+ ++ VE K
Sbjct: 34 LKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYSKAHMVDD--AQNNRPHTIDSRVVETK 91
Query: 97 KA 98
+A
Sbjct: 92 RA 93
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE 94
D K F Q+G++ + +M+D T RSRGFGFIT+ VDD A+ ++++ G VE
Sbjct: 24 DSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVD--GRVVE 81
Query: 95 VKKAEPKK 102
K+A P++
Sbjct: 82 PKRAVPRQ 89
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + +F +G + I+ D T + RGFGF+ FD VD + + N ++ G V+V
Sbjct: 115 EDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNH-QIRGKHVDV 173
Query: 96 KKA 98
KKA
Sbjct: 174 KKA 176
>gi|324507426|gb|ADY43149.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 331
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
F D+F +G+V + +++ D +T + RGF F+TFD AVD + N + + A+ +VKK
Sbjct: 128 FTDYFSNYGNVIKCEVIVDKNTGKPRGFAFVTFDDYDAVDKCVLIKNHM-INNARCDVKK 186
Query: 98 AEPKK 102
A K+
Sbjct: 187 ALSKE 191
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE K+F+ +G++ + +MRD +T RSRGFGF+T+ + V+ + + +
Sbjct: 28 LTSTTTDETLKEFYSTWGELVDCVVMRDPTTKRSRGFGFVTYSKQSEVNAAMENRPHV-I 86
Query: 89 AGAQVEVKKAEPK 101
G V++K+A P+
Sbjct: 87 DGKTVDLKRAVPR 99
>gi|255710315|gb|ACU30977.1| RNA-binding protein musashi [Ochlerotatus triseriatus]
Length = 270
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 86
L+P E + +E K FF Q+G+V E + D ++ +GF FIT+D+E V +LL K K
Sbjct: 92 LSP--ETSDEEIKTFFEQYGNVVEMETPFDKMKNQRKGFCFITYDSEAVVTELL-KTPKQ 148
Query: 87 ELAGAQVEVKKAEPKKPNL 105
+ G +V+VK+A KP++
Sbjct: 149 MVGGKEVDVKRATA-KPDM 166
Score = 43.5 bits (101), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E A + ++ F Q+G+++ I D T RSRGF FI F + +++D ++A + + G
Sbjct: 15 ETAEQDLRNHFGQYGEIESVNIKTDPQTGRSRGFAFIIFKSPESIDKVVAFEDHT-INGK 73
Query: 92 QVEVKKAEPKK 102
+V+ KKA+ ++
Sbjct: 74 KVDPKKAKARQ 84
>gi|119572425|gb|EAW52040.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a
[Homo sapiens]
Length = 309
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VKGHNCEVRK 179
Query: 98 AEPKK 102
A PK+
Sbjct: 180 ALPKQ 184
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + ++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAM-NTTPHKVDGR 82
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 83 VVEPKRA 89
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG + + I+ D T + RGF F+ FD VD ++ + + +L G V+VKK
Sbjct: 133 LRDYFQHFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-QHQLNGKMVDVKK 191
Query: 98 AEPKK 102
A PK+
Sbjct: 192 ALPKQ 196
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D K F ++G + + +M+D T RSRGFGFIT+ +D+ K ++ G VE
Sbjct: 40 DNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSTMIDE-AQKARPHKIDGRVVEP 98
Query: 96 KKAEPKK 102
K+A P++
Sbjct: 99 KRAVPRQ 105
>gi|312282683|dbj|BAJ34207.1| unnamed protein product [Thellungiella halophila]
Length = 166
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F QFG+V + +I+ D T RSRGFGF+TF E+++ D + + N EL G + V +A+
Sbjct: 27 FSQFGEVIDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEEMNGKELDGRSITVNEAQ 84
>gi|728594|emb|CAA88558.1| glycine rich protein, RNA binding protein [Hordeum vulgare subsp.
vulgare]
Length = 173
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 41/62 (66%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F Q+G++ + +I+ D T RSRGFGF+TF +E+++ + + N EL G QV V +A+ +
Sbjct: 26 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRQVTVNEAQSR 85
Query: 102 KP 103
+
Sbjct: 86 RS 87
>gi|49402291|ref|NP_956398.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|27882514|gb|AAH44442.1| Heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
Length = 422
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 3/87 (3%)
Query: 16 QTTTQKMTGLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQA 75
TT +K+ + TE + +D+F QFG ++ +IM DH T RGF F+TFD +
Sbjct: 120 HTTVKKIFVGGIKDDTEE--NHLRDYFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDS 177
Query: 76 VDDLLAKGNKLELAGAQVEVKKAEPKK 102
VD ++ + + G EV+KA K+
Sbjct: 178 VDRIVIQKYHT-VNGHNCEVRKALSKQ 203
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D + F Q+G + + +M+D +T RSRGFGF+T+ + V+ + A+ +K++ G
Sbjct: 43 ETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSSVDEVNASMDARPHKVD--G 100
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 101 RLVEPKRA 108
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE 94
D K F Q+G++ + +M+D T RSRGFGFIT+ VDD A+ ++++ G VE
Sbjct: 62 DSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHRVD--GRVVE 119
Query: 95 VKKAEPKK 102
K+A P++
Sbjct: 120 PKRAVPRQ 127
>gi|169865640|ref|XP_001839418.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coprinopsis cinerea
okayama7#130]
gi|116499426|gb|EAU82321.1| heterogeneous nuclear ribonucleoprotein HRP1 [Coprinopsis cinerea
okayama7#130]
Length = 495
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ ++FF QFG V + +M D T RS+GFGFI+F+ + V L GN LE+ G ++V
Sbjct: 233 ESMREFFSQFGKVIDSTVMLDRETGRSKGFGFISFE-DTDVRPFLGFGN-LEIDGKLIDV 290
Query: 96 KKAEPK 101
K A+P+
Sbjct: 291 KLAQPR 296
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F QFG V IMRD + RSR F F+TF+ +V+ ++ + + L+ G ++ K+
Sbjct: 152 LRDYFSQFGKVDACTIMRD-AAGRSRCFAFLTFEDPASVNAVMVREHILD--GKIIDPKR 208
Query: 98 AEPKK 102
A P++
Sbjct: 209 AIPRQ 213
>gi|47218115|emb|CAG09987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 419
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ +D+F ++G ++ IM + ST + RGF F+TFD VD ++A+ + EV
Sbjct: 112 DQIRDYFEKYGKIECVDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHT-INSHNCEV 170
Query: 96 KKAEPKK 102
+KA K+
Sbjct: 171 RKALSKQ 177
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F ++G + + +MR+ S RSRGFGF+T+ + + VD+ + K ++ G
Sbjct: 17 ETTEESLRAHFEKWGSLTDCVVMREPSCKRSRGFGFVTYSSLREVDEAM-KARPHKVDGR 75
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 76 VVEPKRA 82
>gi|403415424|emb|CCM02124.1| predicted protein [Fibroporia radiculosa]
Length = 532
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + FF +G V + +M D + RS+GFGF+TF+ D L+ +G+ L L +EV
Sbjct: 218 DSMRAFFSAYGKVVDCTVMVDRESGRSKGFGFVTFEDASNTDQLVGRGD-LILDDKMIEV 276
Query: 96 KKAEPK 101
K A+P+
Sbjct: 277 KVAQPR 282
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 44/68 (64%), Gaps = 3/68 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+ +F +FG V++ I+RDH RSRGF F+TF+ +V+ ++ + + L+ G ++ K+
Sbjct: 137 LRKYFSEFGKVEDCTILRDHD-GRSRGFAFLTFEDPSSVNAVMVREHILD--GKAIDPKR 193
Query: 98 AEPKKPNL 105
A P++ +L
Sbjct: 194 AIPREEHL 201
>gi|112180524|gb|AAH50513.2| Hnrpa0l protein [Danio rerio]
Length = 302
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ +D+F QFG +++ Q++ D T + RGFGF+ FD + D + + G +VEV
Sbjct: 111 EHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFH-SICGHKVEV 169
Query: 96 KKAEPKKP 103
KKA K+
Sbjct: 170 KKALTKQE 177
>gi|40850963|gb|AAH65334.1| Hnrpa0l protein, partial [Danio rerio]
Length = 299
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ +D+F QFG +++ Q++ D T + RGFGF+ FD + D + + G +VEV
Sbjct: 108 EHLQDYFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDNDSADKAVVMKFH-SICGHKVEV 166
Query: 96 KKAEPKKP 103
KKA K+
Sbjct: 167 KKALTKQE 174
>gi|444519006|gb|ELV12498.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 327
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D +S+ RGF F+TFD + D ++ + + + EVKK
Sbjct: 50 LRDYFEQYGKIEVIEIMTDQGSSKKRGFAFVTFDDHDSADKIVIQKDNT-VNSHNCEVKK 108
Query: 98 AEPKK 102
A K+
Sbjct: 109 ALSKQ 113
>gi|2293480|gb|AAB65412.1| glycine-rich protein [Oryza sativa Indica Group]
Length = 161
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F +G++ E +I+ D T RSRGFGF+TF +EQA+ D + N EL G + V +A+
Sbjct: 28 FSTYGEILESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|2226370|gb|AAC50020.1| RNA-binding protein [Nicotiana glutinosa]
Length = 156
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 40 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
D F Q+G++ + +I+ D T RSRGFGF+TF EQA+ D + N +L G + V +A+
Sbjct: 24 DAFSQYGEILDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
Query: 100 P 100
Sbjct: 84 S 84
>gi|238011394|gb|ACR36732.1| unknown [Zea mays]
Length = 149
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE+A+ + + N EL G + V +A+
Sbjct: 28 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|219888685|gb|ACL54717.1| unknown [Zea mays]
gi|414869098|tpg|DAA47655.1| TPA: glycine-rich protein1 [Zea mays]
Length = 144
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE+A+ + + N EL G + V +A+
Sbjct: 28 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|195612516|gb|ACG28088.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|414869096|tpg|DAA47653.1| TPA: glycine-rich protein1 isoform 1 [Zea mays]
gi|414869097|tpg|DAA47654.1| TPA: glycine-rich protein1 isoform 2 [Zea mays]
Length = 155
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE+A+ + + N EL G + V +A+
Sbjct: 28 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|195609654|gb|ACG26657.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612080|gb|ACG27870.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195612572|gb|ACG28116.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE+A+ + + N EL G + V +A+
Sbjct: 28 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRNAIEGMNGKELDGRNITVNEAQS 86
>gi|331241775|ref|XP_003333535.1| hypothetical protein PGTG_14957 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312525|gb|EFP89116.1| small subunit ribosomal protein S19 [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 206
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 34/61 (55%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F QFGDV + +M+D T RSRGFGFITF E A + N EL G ++ V
Sbjct: 48 LKSAFGQFGDVVDAIVMQDRETGRSRGFGFITFKEEAAAPGAIEALNGQELDGREIRVNY 107
Query: 98 A 98
A
Sbjct: 108 A 108
>gi|187373099|gb|ACD03270.1| glycine-rich RNA-binding protein [Nicotiana tabacum]
Length = 157
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 40 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
D F Q+G++ + +I+ D T RSRGFGF+TF EQA+ D + N +L G + V +A+
Sbjct: 24 DAFSQYGEIVDSKIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRNITVNEAQ 83
>gi|432865306|ref|XP_004070518.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oryzias latipes]
Length = 329
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F QFG ++ IM D +T + RGF F+TFD +VD ++ + + EV+K
Sbjct: 120 LRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHT-INSHNCEVRK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALTKQ 183
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD ++ RSRGFGF+T+ + Q VD + A+ +K++ G
Sbjct: 23 ETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEVDAAMSARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|391328905|ref|XP_003738923.1| PREDICTED: RNA-binding protein squid-like [Metaseiulus
occidentalis]
Length = 299
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + F ++G++QE + D T +SRGFGFITF ++QAV+D +A G + G Q++ K
Sbjct: 60 DLRSHFEKYGEIQECTVKMDPMTKKSRGFGFITFGSKQAVEDAIA-GAPHTIKGKQIDPK 118
Query: 97 --KAEP 100
KA P
Sbjct: 119 AAKARP 124
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E +E + +F Q+G+++ ++ D ++ RGF F+T++T A D + K K + G
Sbjct: 137 ETTEEEIRTYFGQYGNIEALELPVDKEKNQRRGFIFVTYETTAAADAAVKKP-KQTINGK 195
Query: 92 QVEVKKAEPK 101
+ +VKKA PK
Sbjct: 196 ECDVKKATPK 205
>gi|403287876|ref|XP_003935149.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 356
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D S+ + +GF F+TFD +VD ++ K + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRSSGKKKGFAFVTFDDHDSVDKIIIKKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|30681492|ref|NP_850017.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|330252116|gb|AEC07210.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 159
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+GDV + +I+ D T RSRGFGF+TF E+A+ D + N +L G + V +A+
Sbjct: 28 FAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|21553354|gb|AAM62447.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
Length = 175
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+GDV + +I+ D T RSRGFGF+TF E+A+ D + N +L G + V +A+
Sbjct: 28 FAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|227204227|dbj|BAH56965.1| AT2G21660 [Arabidopsis thaliana]
Length = 153
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+GDV + +I+ D T RSRGFGF+TF E+A+ D + N +L G + V +A+
Sbjct: 28 FAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|15226605|ref|NP_179760.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
gi|544424|sp|Q03250.1|GRP7_ARATH RecName: Full=Glycine-rich RNA-binding protein 7
gi|16226372|gb|AAL16149.1|AF428381_1 At2g22292/F2G1.7_ [Arabidopsis thaliana]
gi|16301|emb|CAA78711.1| glycine rich protein [Arabidopsis thaliana]
gi|166837|gb|AAA32853.1| RNA-binding protein [Arabidopsis thaliana]
gi|4567224|gb|AAD23639.1| glycine-rich RNA binding protein 7 [Arabidopsis thaliana]
gi|15810032|gb|AAL06943.1| At2g21660/F2G1.7 [Arabidopsis thaliana]
gi|330252115|gb|AEC07209.1| glycine-rich RNA-binding protein 7 [Arabidopsis thaliana]
Length = 176
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+GDV + +I+ D T RSRGFGF+TF E+A+ D + N +L G + V +A+
Sbjct: 28 FAQYGDVIDSKIINDRETGRSRGFGFVTFKDEKAMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|390598799|gb|EIN08196.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 485
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ ++FF QFG V + +M D T RS+GFGFI+ + + V +L GN LE+ G ++V
Sbjct: 229 ESMREFFSQFGKVTDSTVMLDRETGRSKGFGFISLE-DVDVTPILGFGN-LEIDGKLIDV 286
Query: 96 KKAEPK 101
K A+P+
Sbjct: 287 KLAQPR 292
Score = 43.5 bits (101), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 38/64 (59%), Gaps = 3/64 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K +F QFG V IMRD + RSR F F+TF+ +V+ ++ + + L+ G ++ K+
Sbjct: 148 LKSYFEQFGKVDACTIMRD-ANGRSRCFAFLTFEDPASVNAVMVREHILD--GKIIDPKR 204
Query: 98 AEPK 101
A P+
Sbjct: 205 AIPR 208
>gi|399886791|gb|AFP52931.1| RBP1 [Hordeum vulgare]
Length = 162
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F FG++ + +I+ D T RSRGFGF++F EQA+ D + N EL G + V +A+
Sbjct: 29 FSSFGEILDAKIINDRETGRSRGFGFVSFSNEQAMQDAIEGMNGKELDGRSIVVNEAQS 87
>gi|348521586|ref|XP_003448307.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oreochromis niloticus]
Length = 332
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F QFG ++ IM D +T + RGF F+TFD +VD ++ + + EV+K
Sbjct: 121 LRDYFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRIVIQKYHT-INSHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALTKQ 184
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD ++ RSRGFGF+T+ + Q VD + A+ +K++ G
Sbjct: 24 ETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQEVDAAMSARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|409044525|gb|EKM54006.1| hypothetical protein PHACADRAFT_257571 [Phanerochaete carnosa
HHB-10118-sp]
Length = 155
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F QFG + + +MRD T RSRGFGF+TF + + N+ EL G ++ V
Sbjct: 17 DSLRTAFSQFGQILDSIVMRDRDTGRSRGFGFVTFSSANEAQTAITSLNEQELDGRRIRV 76
Query: 96 KKAEPK 101
A +
Sbjct: 77 NLANAR 82
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 37/65 (56%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K+ F Q+GDV E +++ D T RSRGFGFI+F + + L + +L G ++ V
Sbjct: 56 LKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEEAASALQAMDGQDLHGRRIRVNY 115
Query: 98 AEPKK 102
A K+
Sbjct: 116 ATEKR 120
>gi|94482853|gb|ABF22468.1| heterogeneous nuclear ribonucleoprotein A3 [Takifugu rubripes]
Length = 341
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGNKLELAGAQVE 94
D+ +D+F ++G ++ IM + S+ + RGF F+TFD VD ++A K + + L E
Sbjct: 123 DQIRDYFEKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTINLHNC--E 180
Query: 95 VKKAEPKK 102
V+KA K+
Sbjct: 181 VRKALSKQ 188
Score = 42.0 bits (97), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F ++G + + +MR+ + RSRGFGF+T+ + VD+ + K ++ G
Sbjct: 28 ETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREVDEAM-KARPHKVDGR 86
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 87 VVEPKRA 93
>gi|297825019|ref|XP_002880392.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
gi|297326231|gb|EFH56651.1| hypothetical protein ARALYDRAFT_481034 [Arabidopsis lyrata subsp.
lyrata]
Length = 159
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+GDV + +I+ D T RSRGFGF+TF E+++ D + N EL G + V +A+
Sbjct: 28 FSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQELDGRSITVNEAQ 85
>gi|242084350|ref|XP_002442600.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
gi|241943293|gb|EES16438.1| hypothetical protein SORBIDRAFT_08g022740 [Sorghum bicolor]
Length = 165
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE+A+ + N EL G + V +A+
Sbjct: 28 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|299751777|ref|XP_001830476.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
gi|298409530|gb|EAU91356.2| glycine-rich RNA binding protein [Coprinopsis cinerea okayama7#130]
Length = 142
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F Q+G+V + +MRD T RSRGFGF+T+ + D +A + EL G +++V
Sbjct: 17 DSLRQAFSQYGNVLDSIVMRDRDTGRSRGFGFVTYSATEEADAAIASLHDQELDGRRIKV 76
Query: 96 KKAEPK 101
A +
Sbjct: 77 NIANAR 82
>gi|170586940|ref|XP_001898237.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594632|gb|EDP33216.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 314
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE K+F+ ++G + + +MRD +T RSRGFGF++F + VD +A + +
Sbjct: 36 LTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMANRPHI-I 94
Query: 89 AGAQVEVKKAEPKK 102
G V+ K+A P++
Sbjct: 95 DGKTVDPKRAVPRE 108
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D FK+ F ++G++ + +I+ D +T + RGF FITFD AVD + + + +
Sbjct: 130 EHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHM-INNY 188
Query: 92 QVEVKKAEPKK 102
+ +VKKA K+
Sbjct: 189 RCDVKKALSKE 199
>gi|90704785|dbj|BAE92287.1| putative glycine-rich RNA binding protein [Cryptomeria japonica]
Length = 181
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
KD F FG+V + +++ D T RSRGFGF+TF EQ++ D + N +L G + V +
Sbjct: 24 LKDAFTAFGEVMDSKVVSDRETGRSRGFGFVTFMDEQSMRDAIEGMNGRDLDGRNITVNR 83
Query: 98 AEP 100
A+
Sbjct: 84 AQA 86
>gi|115532850|ref|NP_001040945.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
gi|351063093|emb|CCD71137.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
Length = 347
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++F+ QFG++ + +MRD +T RSRGFGF+TF + VD + + + + G V+
Sbjct: 37 DLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHI-IDGKTVDP 95
Query: 96 KKAEPK 101
K+A P+
Sbjct: 96 KRAVPR 101
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++F ++G V + +I+ D +T + RGFGF+TFD +VD + + + + + G + +V
Sbjct: 128 DMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHM-VNGHRCDV 186
Query: 96 KK 97
+K
Sbjct: 187 RK 188
>gi|25145229|ref|NP_500326.2| Protein HRP-1, isoform a [Caenorhabditis elegans]
gi|74965787|sp|Q22037.1|ROA1_CAEEL RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1
gi|217300|dbj|BAA01645.1| hnRNP like protein [Caenorhabditis elegans]
gi|351063090|emb|CCD71134.1| Protein HRP-1, isoform a [Caenorhabditis elegans]
Length = 346
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++F+ QFG++ + +MRD +T RSRGFGF+TF + VD + + + + G V+
Sbjct: 37 DLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHI-IDGKTVDP 95
Query: 96 KKAEPK 101
K+A P+
Sbjct: 96 KRAVPR 101
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++F ++G V + +I+ D +T + RGFGF+TFD +VD + + + + + G + +V
Sbjct: 128 DMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHM-VNGHRCDV 186
Query: 96 KK 97
+K
Sbjct: 187 RK 188
>gi|311780287|gb|ADQ08684.1| putative glycine-rich RNA-binding protein 1 [Malus hupehensis]
Length = 164
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F Q+G++ E +I+ D T RSRGFGF+TF +EQA+ D + N L G + V +A+
Sbjct: 28 FSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|296142019|gb|ADG96008.1| putative glycine-rich RNA-binding protein 1 [Malus prunifolia]
Length = 171
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F Q+G++ E +I+ D T RSRGFGF+TF +EQA+ D + N L G + V +A+
Sbjct: 28 FSQYGEIIESKIINDRETGRSRGFGFVTFGSEQAMRDAIEGMNGQNLDGRNITVNEAQS 86
>gi|351725469|ref|NP_001238373.1| glycine-rich RNA-binding protein [Glycine max]
gi|5726567|gb|AAD48471.1|AF169205_1 glycine-rich RNA-binding protein [Glycine max]
Length = 160
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+G++ E +I+ D T RSRGFGF+TF +EQ++ D + N L G + V +A+
Sbjct: 28 FSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIGAMNGQNLDGRNITVNEAQ 85
>gi|356541091|ref|XP_003539016.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 207
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+G++ E +I+ D T RSRGFGF+TF +EQ++ D + N L G + V +A+
Sbjct: 64 FSQYGEIVETKIINDRETGRSRGFGFVTFASEQSMKDAIEGMNGQNLDGRNITVNEAQ 121
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F +G++ + I+ D T + RGF F+ FD VD ++ + + +L G V+VKK
Sbjct: 134 LRDYFQHYGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-QHQLNGKMVDVKK 192
Query: 98 AEPKK 102
A PK+
Sbjct: 193 ALPKQ 197
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D K F ++G + + +M+D T RSRGFGFIT+ VD+ K ++ G VE
Sbjct: 41 DNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDE-AQKARPHKIDGRVVEP 99
Query: 96 KKAEPKK 102
K+A P++
Sbjct: 100 KRAVPRQ 106
>gi|390432205|gb|AFL91694.1| glycine-rich RNA binding protein [Raphanus sativus var.
raphanistroides]
Length = 153
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F Q+GDV + +I+ D T RSRGFGF+TF E+++ D + N +L G + V +A+
Sbjct: 28 FSQYGDVLDSKIINDRETGRSRGFGFVTFKDEKSMRDAIEAMNGQDLDGRSITVNEAQS 86
>gi|544421|sp|Q99069.1|GRP1_SORBI RecName: Full=Glycine-rich RNA-binding protein 1
gi|21623|emb|CAA40863.1| glycine-rich RNA-binding protein [Sorghum bicolor]
Length = 142
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE+A+ + N EL G + V +A+
Sbjct: 7 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEEAMRSAIEGMNGKELDGRNITVNEAQS 65
>gi|341894622|gb|EGT50557.1| CBN-HRP-1 protein [Caenorhabditis brenneri]
Length = 343
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 30 VTEPALDEF-KDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE ++F+ QFG++ + +MRD +T RSRGFGF+TF + VD + + + +
Sbjct: 30 LTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTGKTEVDAAMKQRPHV-I 88
Query: 89 AGAQVEVKKAEPK 101
G V+ K+A P+
Sbjct: 89 DGKTVDPKRAVPR 101
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 40/62 (64%), Gaps = 1/62 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++F ++G+V + +I+ D +T + RGFGF+TFD +VD + + + + + G + +V
Sbjct: 128 DMLTEYFSKYGNVVKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHM-VNGHRCDV 186
Query: 96 KK 97
+K
Sbjct: 187 RK 188
>gi|410896922|ref|XP_003961948.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Takifugu rubripes]
Length = 336
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGNKLELAGAQVE 94
D+ +D+F ++G ++ IM + S+ + RGF F+TFD VD ++A K + + L E
Sbjct: 118 DQIRDYFEKYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKIVAQKYHTINLHNC--E 175
Query: 95 VKKAEPKK 102
V+KA K+
Sbjct: 176 VRKALSKQ 183
Score = 41.6 bits (96), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F ++G + + +MR+ + RSRGFGF+T+ + VD+ + K ++ G
Sbjct: 23 ETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTYSCLREVDEAM-KARPHKVDGR 81
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 82 VVEPKRA 88
>gi|170098488|ref|XP_001880463.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644901|gb|EDR09150.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 154
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F +FG V + +MRD T RSRGFGF+TF + Q D + N+ EL G +++V
Sbjct: 17 DTLRQAFSEFGQVLDSIVMRDRDTGRSRGFGFVTFSSGQEADAAIGGLNEQELDGRRIKV 76
Query: 96 KKAEPK 101
A +
Sbjct: 77 NLANAR 82
>gi|47939618|gb|AAH71945.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F QFG ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQFGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|223647288|gb|ACN10402.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|223673171|gb|ACN12767.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 384
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F QFG ++ IM D ++ + RGF F+TFD AVD ++ + L G EV+K
Sbjct: 120 LRDYFEQFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDAVDRIVIQKYHT-LNGHNCEVRK 178
Query: 98 A 98
A
Sbjct: 179 A 179
>gi|384249391|gb|EIE22873.1| hypothetical protein COCSUDRAFT_66433 [Coccomyxa subellipsoidea
C-169]
Length = 423
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+EF+D+F+ FG++++ ++R SRGFGF+TF E +V+ L + L G QVE+
Sbjct: 181 EEFRDYFLGFGEIEDSVVLRKPDGG-SRGFGFVTFKDEMSVEKCLVMQHFLN--GKQVEI 237
Query: 96 KKAEPKK 102
K+A K+
Sbjct: 238 KRAVKKE 244
>gi|357119387|ref|XP_003561423.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 161
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F FG++ + +I+ D T RSRGFGF+TF +EQ++ D + N +L G + V +
Sbjct: 22 LQDAFSSFGEIIDSKIINDRETGRSRGFGFVTFASEQSMRDAIEGMNGKDLDGRNITVNE 81
Query: 98 AEP 100
A+
Sbjct: 82 AQS 84
>gi|328909069|gb|AEB61202.1| heterogeneous nuclear ribonucleoprotein a1-like protein, partial
[Equus caballus]
Length = 235
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+
Sbjct: 35 HLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVR 93
Query: 97 KAEPKK 102
KA K+
Sbjct: 94 KALSKQ 99
>gi|974605|gb|AAA75104.1| single-stranded nucleic acid binding protein [Triticum aestivum]
Length = 167
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F Q+G++ + +I+ D T RSRGFGF+TF +E+++ + + N EL G + V +A+ +
Sbjct: 26 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRNITVNEAQSR 85
Query: 102 KP 103
+
Sbjct: 86 RS 87
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE 94
D K F ++G++ + +M+D T RSRGFGFIT+ VDD A+ +K++ G VE
Sbjct: 31 DSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVD--GRVVE 88
Query: 95 VKKAEPKK 102
K+A P++
Sbjct: 89 PKRAVPRQ 96
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + +F +G + I+ D T + RGFGF+ FD VD + + N ++ G V+V
Sbjct: 122 EDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNH-QIRGKHVDV 180
Query: 96 KKA 98
KKA
Sbjct: 181 KKA 183
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F Q+G++ + +M+D T RSRGFGFIT+ VDD A+ +K++ G VE K
Sbjct: 33 LKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVD--GRVVEPK 90
Query: 97 KAEPK 101
+A P+
Sbjct: 91 RAVPR 95
>gi|211906474|gb|ACJ11730.1| glycine-rich RNA-binding protein [Gossypium hirsutum]
Length = 168
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F FG++ E +I+ D T RSRGFGF+TF E+A+ D + N L G + V +
Sbjct: 24 LEEAFSAFGEIVESKIINDRETGRSRGFGFVTFRDEKAMRDAIEGMNGQNLDGRNITVNE 83
Query: 98 AEPKKP 103
A+ ++
Sbjct: 84 AQSRRS 89
>gi|4803739|dbj|BAA77512.1| cold-inducible RNA-binding protein [Ciona intestinalis]
Length = 158
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ + F G V+E I+ D T RSRGF F+TF +E +D + N+ ++AG V V
Sbjct: 18 DDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIENLNESDVAGRNVSV 77
Query: 96 KKAEPKKP 103
++A+ K+
Sbjct: 78 RQAQSKRD 85
>gi|357457429|ref|XP_003598995.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355488043|gb|AES69246.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 447
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 11/107 (10%)
Query: 6 TEILTMFINRQTTT--QKMTGLSLTPVTEPAL-------DE--FKDFFMQFGDVQEHQIM 54
T+I + R + + Q + S TP T+ + DE D F ++G V + +I+
Sbjct: 17 TKITSELKLRSSPSVFQAIRCFSSTPNTKLFVGGISYNTDEQSLSDAFSKYGQVLDARII 76
Query: 55 RDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
D + RS+GFGF+T++T + + + +L G +V V A +
Sbjct: 77 MDRESGRSKGFGFVTYNTVEEASSAIQALDGQDLYGRRVGVNFANER 123
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE 94
D K F ++G++ + +M+D T RSRGFGFIT+ VDD A+ +K++ G VE
Sbjct: 31 DSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVD--GRVVE 88
Query: 95 VKKAEPKK 102
K+A P++
Sbjct: 89 PKRAVPRQ 96
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + +F +G + I+ D T + RGFGF+ FD VD + + N ++ G V+V
Sbjct: 122 EDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNH-QIRGKHVDV 180
Query: 96 KKA 98
KKA
Sbjct: 181 KKA 183
>gi|410954614|ref|XP_003983958.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Felis catus]
Length = 301
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K
Sbjct: 24 ETTNESLRSHFEQWGTITDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARAHK----- 78
Query: 91 AQVEVKKAEPKKPNLPQPSYR 111
V+ + EPK+ L + S R
Sbjct: 79 --VDGRVVEPKRAVLREDSQR 97
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDQGSGKKRGFPFVTFDDHDSVDKIAIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|469070|dbj|BAA03741.1| RNA-binding glycine-rich protein-1a [Nicotiana sylvestris]
gi|295393563|gb|ADG03637.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 156
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F QFG++ + +I+ D T RSRGFGF+TF E+A+ D + N +L G + V +A+
Sbjct: 26 FSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMNGQDLDGRNITVNEAQ 83
>gi|110767982|ref|XP_624411.2| PREDICTED: hypothetical protein LOC552027 [Apis mellifera]
gi|380027797|ref|XP_003697603.1| PREDICTED: uncharacterized protein LOC100868777 [Apis florea]
Length = 378
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE 94
D K F ++G++ + +M+D T RSRGFGFIT+ VDD A+ +K++ G VE
Sbjct: 31 DSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVD--GRVVE 88
Query: 95 VKKAEPKK 102
K+A P++
Sbjct: 89 PKRAVPRQ 96
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ K +F +G + I+ D T + RGFGF+ FD VD + + N ++ G V+V
Sbjct: 122 DDLKQYFQSYGTINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNH-QIRGKHVDV 180
Query: 96 KKA 98
KKA
Sbjct: 181 KKA 183
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG + + I+ D T + RGF F+ FD VD ++ + +L G V+VKK
Sbjct: 137 LRDYFSNFGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQH-QLNGKMVDVKK 195
Query: 98 AEPKKPNL 105
A PK+ ++
Sbjct: 196 ALPKQNDM 203
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G + + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 46 LKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKARPHKIDGRVVEPKR 104
Query: 98 AEPKK 102
A P++
Sbjct: 105 AVPRQ 109
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE 94
D K F ++G++ + +M+D T RSRGFGFIT+ VDD A+ +K++ G VE
Sbjct: 31 DSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVDDAQNARPHKVD--GRVVE 88
Query: 95 VKKAEPKK 102
K+A P++
Sbjct: 89 PKRAVPRQ 96
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + +F +G + I+ D T + RGFGF+ FD VD + + N ++ G V+V
Sbjct: 122 EDLRQYFQSYGSINSISIVTDKETGKKRGFGFVEFDDYDPVDKICLQRNH-QIRGKHVDV 180
Query: 96 KKA 98
KKA
Sbjct: 181 KKA 183
>gi|356508388|ref|XP_003522939.1| PREDICTED: uncharacterized protein LOC100806292 [Glycine max]
Length = 185
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F +G++ E +++ D T RSRGFGF+TF +EQA+ D + N L G + V
Sbjct: 22 DALEKAFSHYGEIVESKVIIDRETGRSRGFGFVTFASEQAMKDAIEGMNGQNLDGRSITV 81
Query: 96 KKAEP 100
+A+
Sbjct: 82 NEAQS 86
>gi|331241781|ref|XP_003333538.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312528|gb|EFP89119.1| hypothetical protein PGTG_14960 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 179
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 34/64 (53%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F QFGDV + +M+D T RSRGFGFITF E + N EL G ++ V
Sbjct: 24 LKSAFGQFGDVIDAIVMQDRETGRSRGFGFITFKEEADAPGAIEALNGQELDGREIRVNY 83
Query: 98 AEPK 101
A +
Sbjct: 84 ANSQ 87
>gi|74141832|dbj|BAE40987.1| unnamed protein product [Mus musculus]
Length = 320
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G+++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGEIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|20152613|emb|CAD29693.1| putative glycine rich protein [Rumex obtusifolius]
Length = 168
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G V E +I+ D T RSRGFGF+TF +EQA+ D + N +L G + V +A+
Sbjct: 27 FSNYGQVLESKIINDRETGRSRGFGFVTFSSEQAMRDAIEGMNGQDLDGRNITVNEAQS 85
>gi|194382016|dbj|BAG64377.1| unnamed protein product [Homo sapiens]
Length = 254
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|115532848|ref|NP_001040944.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
gi|351063092|emb|CCD71136.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
Length = 308
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++F+ QFG++ + +MRD +T RSRGFGF+TF + VD + + + + G V+ K+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHI-IDGKTVDPKR 59
Query: 98 AEPK 101
A P+
Sbjct: 60 AVPR 63
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++F ++G V + +I+ D +T + RGFGF+TFD +VD + + + + + G + +V
Sbjct: 90 DMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHM-VNGHRCDV 148
Query: 96 KK 97
+K
Sbjct: 149 RK 150
>gi|71988518|ref|NP_001023199.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
gi|351063091|emb|CCD71135.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
Length = 309
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++F+ QFG++ + +MRD +T RSRGFGF+TF + VD + + + + G V+ K+
Sbjct: 1 MREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVDAAMKQRPHI-IDGKTVDPKR 59
Query: 98 AEPK 101
A P+
Sbjct: 60 AVPR 63
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++F ++G V + +I+ D +T + RGFGF+TFD +VD + + + + + G + +V
Sbjct: 90 DMLTEYFTKYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQCVLQKSHM-VNGHRCDV 148
Query: 96 KK 97
+K
Sbjct: 149 RK 150
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F +G + + I+ D T + RGF F+ FD VD ++ + + +L G V+VKK
Sbjct: 134 LRDYFQHYGSIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQK-QHQLNGKMVDVKK 192
Query: 98 AEPKK 102
A PK+
Sbjct: 193 ALPKQ 197
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D K F ++G + + +M+D T RSRGFGFIT+ VD+ K ++ G VE
Sbjct: 41 DNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDE-AQKARPHKIDGRVVEP 99
Query: 96 KKAEPKK 102
K+A P++
Sbjct: 100 KRAVPRQ 106
>gi|116780918|gb|ABK21879.1| unknown [Picea sitchensis]
Length = 172
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F FG++ E +I+ D T RSRGFGF+TF EQ++ D + N L G + V
Sbjct: 25 LQDAFSPFGEILESKIISDRETGRSRGFGFVTFSDEQSMRDAIDAMNGKVLDGRNITVNP 84
Query: 98 AE 99
A+
Sbjct: 85 AQ 86
>gi|219521089|gb|AAI72047.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521464|gb|AAI72049.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521466|gb|AAI72057.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521468|gb|AAI72058.1| Hnrnpa1l2 protein [Mus musculus]
Length = 275
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 76 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 134
Query: 98 AEPKKPNLPQPSYRR 112
A K+ S +R
Sbjct: 135 ALSKQEMASASSSQR 149
>gi|24650833|ref|NP_733250.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|157653|gb|AAA28623.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172510|gb|AAN14141.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|259089588|gb|ACV91650.1| RE34829p [Drosophila melanogaster]
Length = 360
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + + +L G V+VKK
Sbjct: 133 IRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK-QHQLNGKMVDVKK 191
Query: 98 AEPKK 102
A PK+
Sbjct: 192 ALPKQ 196
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 42 LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKR 100
Query: 98 AEPKK 102
A P++
Sbjct: 101 AVPRQ 105
>gi|392593257|gb|EIW82582.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 136
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++ F ++G V + +MRD T RSRGFGF+TF T + + + + ++ EL G + V
Sbjct: 17 DGLRNAFGRYGAVTDSIVMRDRETGRSRGFGFVTFTTAEEANAAMGQMDQTELDGRTIRV 76
Query: 96 KKAEPK 101
A K
Sbjct: 77 NVANAK 82
>gi|357473251|ref|XP_003606910.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507965|gb|AES89107.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 161
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+G++ + +I+ D T RSRGFGF+TF E++++D + N +L G + V +A+
Sbjct: 26 FSQYGEIVDSKIINDRETGRSRGFGFVTFANEKSMNDAIEAMNGQDLDGRNITVNQAQ 83
>gi|317183317|gb|ADV15462.1| LD46071p [Drosophila melanogaster]
Length = 396
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + +L G V+VKK
Sbjct: 169 IRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQH-QLNGKMVDVKK 227
Query: 98 AEPKK 102
A PK+
Sbjct: 228 ALPKQ 232
Score = 40.8 bits (94), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 78 LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKR 136
Query: 98 AEPKK 102
A P++
Sbjct: 137 AVPRQ 141
>gi|302679630|ref|XP_003029497.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
gi|300103187|gb|EFI94594.1| hypothetical protein SCHCODRAFT_85789 [Schizophyllum commune H4-8]
Length = 174
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F FG V + +MRD T RSRGFGF+TF + + ++ N+ EL G +++V
Sbjct: 17 DTLRQAFSNFGQVLDSIVMRDRETGRSRGFGFVTFSSSGEAESAISSLNEQELDGRRIKV 76
Query: 96 KKAEPK 101
A +
Sbjct: 77 NLANAR 82
>gi|421976742|gb|AFX73254.1| glycine rich RNA binding protein 1a [Solanum lycopersicum]
Length = 164
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
D F +G+V + +I+ D T RSRGFGF+TF E+++ D ++ N EL G + V +
Sbjct: 23 LSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAISGMNGQELDGRNITVNE 82
Query: 98 AEP 100
A+
Sbjct: 83 AQA 85
>gi|291394513|ref|XP_002713753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|224077836|ref|XP_002305429.1| predicted protein [Populus trichocarpa]
gi|118481826|gb|ABK92850.1| unknown [Populus trichocarpa]
gi|222848393|gb|EEE85940.1| predicted protein [Populus trichocarpa]
Length = 165
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F Q+G++ + +I+ D T RSRGFGF+TF+ E+A+ D + N +L G + V +
Sbjct: 23 LQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFNNEKAMRDAIDGMNGQDLDGRNITVNE 82
Query: 98 AE 99
A+
Sbjct: 83 AQ 84
>gi|108710322|gb|ABF98117.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
Length = 153
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F +G++ + +I+ D T RSRGFGF+TF +EQ++ D + N EL G + V +A+
Sbjct: 28 FSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|50881454|gb|AAT85299.1| glycine-rich RNA-binding protein, putative [Oryza sativa Japonica
Group]
gi|108710320|gb|ABF98115.1| retrotransposon protein, putative, Ty1-copia subclass, expressed
[Oryza sativa Japonica Group]
gi|154550663|gb|ABS83497.1| receptor-like serine threonine kinase [Oryza sativa Japonica
Group]
gi|169244423|gb|ACA50485.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
gi|215697732|dbj|BAG91726.1| unnamed protein product [Oryza sativa Japonica Group]
gi|306415943|gb|ADM86846.1| glycine-rich RNA binding protein [Oryza sativa Japonica Group]
Length = 162
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F +G++ + +I+ D T RSRGFGF+TF +EQ++ D + N EL G + V +A+
Sbjct: 28 FSTYGEILDSKIINDRETGRSRGFGFVTFSSEQSMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|24650831|ref|NP_733249.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
gi|157652|gb|AAA28622.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172509|gb|AAF56800.2| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
Length = 364
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + + +L G V+VKK
Sbjct: 137 IRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQK-QHQLNGKMVDVKK 195
Query: 98 AEPKK 102
A PK+
Sbjct: 196 ALPKQ 200
Score = 40.8 bits (94), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 46 LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKR 104
Query: 98 AEPKK 102
A P++
Sbjct: 105 AVPRQ 109
>gi|255571962|ref|XP_002526922.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223533674|gb|EEF35409.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 166
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 29 PVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
++ AL+E F +G+V E +I+ D T RSRGFGF+TF+ E+++ D + N L
Sbjct: 18 ATSDKALEEA---FSAYGEVLESKIINDRETGRSRGFGFVTFNNEKSMRDAIEGMNGQNL 74
Query: 89 AGAQVEVKKAEP 100
G + V +A+
Sbjct: 75 DGRNITVNEAQS 86
>gi|324506130|gb|ADY42625.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 346
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE K+F+ +G++ + +MRD +T RSRGFGF+T+ + V+ + + +
Sbjct: 28 LTSTTTDETLKEFYSTWGELVDCVVMRDPTTKRSRGFGFVTYSKQSEVNAAMENRPHV-I 86
Query: 89 AGAQVEVKKAEPK 101
G V+ K+A P+
Sbjct: 87 DGKTVDPKRAVPR 99
>gi|195618802|gb|ACG31231.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195625478|gb|ACG34569.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 146
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE A+ + N EL G + V +A+
Sbjct: 28 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 86
>gi|194906902|ref|XP_001981451.1| GG11603 [Drosophila erecta]
gi|190656089|gb|EDV53321.1| GG11603 [Drosophila erecta]
Length = 358
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + +L G V+VKK
Sbjct: 134 IRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQH-QLNGKMVDVKK 192
Query: 98 AEPKK 102
A PK+
Sbjct: 193 ALPKQ 197
Score = 40.0 bits (92), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 43 LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKR 101
Query: 98 AEPKK 102
A P++
Sbjct: 102 AVPRQ 106
>gi|426375631|ref|XP_004054631.1| PREDICTED: uncharacterized protein LOC101151151 [Gorilla gorilla
gorilla]
Length = 319
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 13 INRQTTTQKMTGLSLTPV----TEPALDEF--KDFFMQFGDVQEHQIMRDHSTSRSRGFG 66
++RQ + + + L++ + + +E+ +D+F ++G ++ ++M D + + RGF
Sbjct: 51 VSRQDSVKPVAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFA 110
Query: 67 FITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
F+TFD +D ++ + + G EVKKA K+
Sbjct: 111 FVTFDDHDIIDKIVVQKYHT-INGHNCEVKKALSKQ 145
>gi|393911995|gb|EJD76539.1| heterogeneous ribonuclear particle protein, variant [Loa loa]
Length = 317
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE K+F+ ++G + + +MRD +T RSRGFGF++F + VD +A + +
Sbjct: 28 LTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMANRPHI-I 86
Query: 89 AGAQVEVKKAEPKK 102
G V+ K+A P++
Sbjct: 87 DGKTVDPKRAVPRE 100
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D FK+ F ++G++ + +I+ D +T + RGF FITFD AVD + + + +
Sbjct: 122 EHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHM-INNY 180
Query: 92 QVEVKKAEPKK 102
+ +VKKA K+
Sbjct: 181 RCDVKKALSKE 191
>gi|190360152|sp|P0C7M2.1|RA1L3_HUMAN RecName: Full=Putative heterogeneous nuclear ribonucleoprotein
A1-like 3; Short=hnRNP A1-like 3; AltName: Full=hnRNP
core protein A1-like 3
gi|119621694|gb|EAX01289.1| hCG2020860, isoform CRA_b [Homo sapiens]
gi|119621695|gb|EAX01290.1| hCG2020860, isoform CRA_b [Homo sapiens]
Length = 320
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|390602556|gb|EIN11949.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 161
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +G + + +MRD T RSRGFGF+TF + D+ +A N+ +L G ++ V A +
Sbjct: 23 FSHYGQILDSIVMRDRDTGRSRGFGFVTFSSSAEADNAIASLNEQDLDGRRIRVNLANAR 82
>gi|213513508|ref|NP_001134615.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
gi|209734656|gb|ACI68197.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
Length = 339
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D +++F +G ++ IM + +T + RGF F++FD VD ++A+ + EV
Sbjct: 118 DHIREYFETYGRIETIDIMEERATGKKRGFCFVSFDDNDTVDKIVAQKYHT-INSHNCEV 176
Query: 96 KKAEPKK 102
+KA PK+
Sbjct: 177 RKALPKQ 183
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L + F Q+G++ + +MRD + RSRGFGF+T+ + VD +A
Sbjct: 19 GLSFE-TTEESL---RIHFEQWGNLTDSVVMRDPNNKRSRGFGFVTYSCVEEVDACMA-A 73
Query: 84 NKLELAGAQVEVKKA 98
++ G VE K+A
Sbjct: 74 RPHKVDGRVVEPKRA 88
>gi|148671985|gb|EDL03932.1| mCG15678, isoform CRA_c [Mus musculus]
Length = 335
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 136 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 194
Query: 98 AEPKK 102
A K+
Sbjct: 195 ALSKQ 199
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 39 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 96
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 97 RVVEPKRA 104
>gi|212722336|ref|NP_001132163.1| uncharacterized protein LOC100193584 [Zea mays]
gi|194693616|gb|ACF80892.1| unknown [Zea mays]
Length = 234
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 39/64 (60%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ ++ F +G++ + +++ D T RSRGFGF+TF +E ++ D + N EL G + V
Sbjct: 97 ESLENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITV 156
Query: 96 KKAE 99
+A+
Sbjct: 157 NQAQ 160
>gi|13436308|gb|AAH04945.1| Unknown (protein for IMAGE:3615335), partial [Homo sapiens]
Length = 298
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 99 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 157
Query: 98 AEPKK 102
A K+
Sbjct: 158 ALSKQ 162
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 2 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 59
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 60 RVVEPKRA 67
>gi|2674201|gb|AAC61786.1| glycine-rich RNA-binding protein [Euphorbia esula]
Length = 164
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F +G++ + +I+ D T RSRGFGF+TF+ E+++ D + N EL G + V +
Sbjct: 23 LQEAFSPYGEILDSKIINDRETGRSRGFGFVTFNNEKSMRDAIQGMNSQELDGRNITVNE 82
Query: 98 AE 99
A+
Sbjct: 83 AQ 84
>gi|20257683|gb|AAM16007.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE A+ + N EL G + V +A+
Sbjct: 37 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|426254471|ref|XP_004020902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT-EQAVDDLLAKGNKLELAG 90
E + + F Q+G + + +MRD +T SRGFGF+T+ T E+ V + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEVVAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|402887374|ref|XP_003907069.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402887376|ref|XP_003907070.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ ++IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVNEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 47/83 (56%), Gaps = 7/83 (8%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AK 82
GLS + E + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+
Sbjct: 20 GLSFETIDES----LRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNAR 75
Query: 83 GNKLE--LAGAQVEVKKAEPKKP 103
+K++ + + V + + ++P
Sbjct: 76 PHKVDGRVVEPKTAVSREDSQRP 98
>gi|426341487|ref|XP_004036066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Gorilla gorilla gorilla]
Length = 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD ++D ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRDSGKKRGFAFVTFDDHDSLDKIVIQKYHT-VKGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|195503537|ref|XP_002098694.1| GE23791 [Drosophila yakuba]
gi|194184795|gb|EDW98406.1| GE23791 [Drosophila yakuba]
Length = 356
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + +L G V+VKK
Sbjct: 133 IRDYFQHFGNIVDINIVMDKETGKKRGFAFVEFDDYDPVDKVVLQKQH-QLNGKMVDVKK 191
Query: 98 AEPKK 102
A PK+
Sbjct: 192 ALPKQ 196
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 42 LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKR 100
Query: 98 AEPKK 102
A P++
Sbjct: 101 AVPRQ 105
>gi|393911994|gb|EFO20372.2| heterogeneous ribonuclear particle protein [Loa loa]
Length = 344
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE K+F+ ++G + + +MRD +T RSRGFGF++F + VD +A + +
Sbjct: 28 LTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMANRPHI-I 86
Query: 89 AGAQVEVKKAEPKK 102
G V+ K+A P++
Sbjct: 87 DGKTVDPKRAVPRE 100
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D FK+ F ++G++ + +I+ D +T + RGF FITFD AVD + + + +
Sbjct: 122 EHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHM-INNY 180
Query: 92 QVEVKKAEPKK 102
+ +VKKA K+
Sbjct: 181 RCDVKKALSKE 191
>gi|324508919|gb|ADY43760.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 378
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 60/116 (51%), Gaps = 18/116 (15%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE ++F+ ++G++ + +MRD +T RSRGFGF+++ + VD+ +A + +
Sbjct: 28 LTSTTTDETLREFYSKWGELVDCVVMRDPTTKRSRGFGFVSYSKQSEVDEAMANRPHV-I 86
Query: 89 AGAQVEVKKAEPKKPNLPQPSYRRYNN--PKPAYGSG---------FGDAYGGYGG 133
G V+ K+A P+ + S R N K Y SG F D +G YG
Sbjct: 87 DGKTVDPKRAVPR-----EQSQRSEANISSKRLYVSGVREDHTEQMFKDHFGKYGN 137
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
FKD F ++G++ + +I+ D +T + RGF F+TFD AVD + + + + A+ +VKK
Sbjct: 128 FKDHFGKYGNIIKCEIIADKATGKPRGFAFVTFDDYDAVDKCILIKSHM-INNARCDVKK 186
Query: 98 A 98
A
Sbjct: 187 A 187
>gi|297793663|ref|XP_002864716.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
gi|297310551|gb|EFH40975.1| hypothetical protein ARALYDRAFT_358310 [Arabidopsis lyrata subsp.
lyrata]
Length = 327
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++ F ++G+V E +++ D T RSRGFGF+TF + +A + + +L G V+V
Sbjct: 54 DSLREAFTKYGEVVETRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKV 113
Query: 96 KKAEPK 101
A +
Sbjct: 114 NYANDR 119
>gi|118489085|gb|ABK96349.1| unknown [Populus trichocarpa x Populus deltoides]
Length = 171
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F Q+G++ + +I+ D T RSRGFGF+TF E+A+ D + N +L G + V +
Sbjct: 23 LQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNE 82
Query: 98 AEP 100
A+
Sbjct: 83 AQS 85
>gi|118481677|gb|ABK92779.1| unknown [Populus trichocarpa]
gi|118481702|gb|ABK92791.1| unknown [Populus trichocarpa]
gi|118482754|gb|ABK93295.1| unknown [Populus trichocarpa]
gi|118483202|gb|ABK93505.1| unknown [Populus trichocarpa]
Length = 170
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F Q+G++ + +I+ D T RSRGFGF+TF E+A+ D + N +L G + V +
Sbjct: 23 LQEAFSQYGEIIDSKIINDRETGRSRGFGFVTFGNEKAMRDAIDGMNGQDLDGRNITVNE 82
Query: 98 AEP 100
A+
Sbjct: 83 AQS 85
>gi|357152879|ref|XP_003576265.1| PREDICTED: glycine-rich RNA-binding protein blt801-like
[Brachypodium distachyon]
Length = 165
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F FG++ + +I++D T RSRGFGF+TF TE+++ + N EL G + V +A+ +
Sbjct: 24 FSNFGEILDAKIIQDRETGRSRGFGFVTFATEESMQAAIEGMNGKELDGRSITVNQAQSR 83
Query: 102 K 102
+
Sbjct: 84 R 84
>gi|312083050|ref|XP_003143699.1| heterogeneous ribonuclear particle protein [Loa loa]
Length = 349
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE K+F+ ++G + + +MRD +T RSRGFGF++F + VD +A + +
Sbjct: 33 LTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMANRPHI-I 91
Query: 89 AGAQVEVKKAEPKK 102
G V+ K+A P++
Sbjct: 92 DGKTVDPKRAVPRE 105
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D FK+ F ++G++ + +I+ D +T + RGF FITFD AVD + + + +
Sbjct: 127 EHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHM-INNY 185
Query: 92 QVEVKKAEPKK 102
+ +VKKA K+
Sbjct: 186 RCDVKKALSKE 196
>gi|291410919|ref|XP_002721735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|209976406|gb|ACJ04160.1| putative glycine-rich RNA-binding protein [Chorispora bungeana]
Length = 175
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+GDV + +I+ D T RSRGFGF+TF E+++ D + N +L G + V +A+
Sbjct: 28 FSQYGDVVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|426241336|ref|XP_004014547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 41.6 bits (96), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T SRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKGSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|20257691|gb|AAM16011.1| glycine-rich RNA binding protein [Zea mays]
Length = 155
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE A+ + N EL G + V +A+
Sbjct: 37 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 95
>gi|426247087|ref|XP_004017318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|440900708|gb|ELR51786.1| hypothetical protein M91_06025, partial [Bos grunniens mutus]
Length = 315
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 116 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 174
Query: 98 AEPKK 102
A K+
Sbjct: 175 ALSKQ 179
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 19 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 76
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 77 RVVEPKRA 84
>gi|114577985|ref|XP_001144332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
Length = 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|15822705|gb|AAL07519.1| RNA-binding protein precursor [Solanum tuberosum]
Length = 339
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K+ F Q+G+V E +++ D T RSRGFGFI+F + + + + +L G +++V
Sbjct: 56 LKETFSQYGEVIEARVILDRETGRSRGFGFISFPSSEEATSAMQAMDGQDLHGRRIKVNY 115
Query: 98 AEPKK 102
A K+
Sbjct: 116 ATEKR 120
>gi|326493798|dbj|BAJ85361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 175
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 40/62 (64%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F Q+G++ + +I+ D T RSRGFGF+TF +E+++ + + N EL G + V +A+ +
Sbjct: 26 FSQYGEILDAKIINDRETGRSRGFGFVTFGSEESMRQAIEEMNGKELDGRSITVNEAQSR 85
Query: 102 KP 103
+
Sbjct: 86 RS 87
>gi|171693991|ref|XP_001911920.1| hypothetical protein [Podospora anserina S mat+]
gi|170946944|emb|CAP73748.1| unnamed protein product [Podospora anserina S mat+]
Length = 342
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 10/86 (11%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT----EQAVDDLLAK 82
+ P E A E F ++G+V++ QIM+D T SRGFGF+ T E A+D L +
Sbjct: 79 IHPRLEEA--EVTRLFEKYGEVEKCQIMKDPQTGESRGFGFVKMVTSEMAEAAIDGL--R 134
Query: 83 GNKLELAGAQVEVKKAEPKKPNLPQP 108
G +E G + ++KA +P P P
Sbjct: 135 GEVIE--GRTLSIEKARRARPRTPTP 158
>gi|426360040|ref|XP_004047259.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 296
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 97 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQ-KYYTVNGHNCEVRK 155
Query: 98 AEPKK 102
A K+
Sbjct: 156 ALSKQ 160
>gi|20257675|gb|AAM16003.1| glycine-rich RNA binding protein [Zea mays]
Length = 156
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE A+ + N EL G + V +A+
Sbjct: 38 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 96
>gi|148671986|gb|EDL03933.1| mCG15678, isoform CRA_d [Mus musculus]
Length = 326
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 127 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 185
Query: 98 AEPKK 102
A K+
Sbjct: 186 ALSKQ 190
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 30 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 87
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 88 RVVEPKRA 95
>gi|74204146|dbj|BAE39838.1| unnamed protein product [Mus musculus]
Length = 320
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|380792669|gb|AFE68210.1| heterogeneous nuclear ribonucleoprotein A1 isoform a, partial
[Macaca mulatta]
Length = 317
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|162463657|ref|NP_001105707.1| glycine-rich protein1 [Zea mays]
gi|22293|emb|CAA43431.1| glycine-rich protein [Zea mays]
Length = 155
Score = 47.8 bits (112), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE+ + + + N EL G + V +A+
Sbjct: 28 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEERMRNRIEGMNGKELDGRNITVNEAQS 86
>gi|36102|emb|CAA29922.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F QFG ++ +IM D + + +GF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQFGKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|148682805|gb|EDL14752.1| mCG117968 [Mus musculus]
Length = 317
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 118 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 176
Query: 98 AEPKK 102
A K+
Sbjct: 177 ALSKQ 181
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLE--L 88
E + + F Q+G + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ +
Sbjct: 21 ETTDESLRSHFEQWGTLTNCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVDGRV 80
Query: 89 AGAQVEVKKAEPKKP 103
+ V + + ++P
Sbjct: 81 VEPKRTVSREDSQRP 95
>gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]
gi|133255|sp|P04256.3|ROA1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; Short=HDP; AltName: Full=Single-strand
RNA-binding protein; AltName: Full=hnRNP core protein A1
gi|204580|gb|AAA41314.1| helix destabilizing protein [Rattus norvegicus]
Length = 320
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALCKQ 184
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|344266091|ref|XP_003405114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Loxodonta africana]
Length = 320
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Homo sapiens]
gi|6754220|ref|NP_034577.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Mus musculus]
gi|114052384|ref|NP_001039376.1| heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|116175259|ref|NP_001070686.1| heterogeneous nuclear ribonucleoprotein A1 [Sus scrofa]
gi|148529006|ref|NP_001091892.1| heterogeneous nuclear ribonucleoprotein A1-like 1 [Pan troglodytes]
gi|308193354|ref|NP_001184040.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|73996139|ref|XP_848386.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Canis lupus familiaris]
gi|332864208|ref|XP_003318234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
gi|354503661|ref|XP_003513899.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Cricetulus
griseus]
gi|402886231|ref|XP_003906538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Papio
anubis]
gi|410058477|ref|XP_003954396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Pan troglodytes]
gi|410964599|ref|XP_003988841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Felis catus]
gi|426224335|ref|XP_004006327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Ovis aries]
gi|1350822|sp|P49312.2|ROA1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=HDP-1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName:
Full=Topoisomerase-inhibitor suppressed; AltName:
Full=hnRNP core protein A1
gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=Unwinding protein 1; Short=UP1;
AltName: Full=hnRNP core protein A1
gi|70819|pir||DDRT helix-destabilizing protein - rat
gi|87651|pir||S04617 heterogeneous ribonuclear particle protein A1 - human
gi|193324|gb|AAA37633.1| RNA binding protein [Mus musculus]
gi|296650|emb|CAA31191.1| hnrnp a1 protein [Homo sapiens]
gi|496898|emb|CAA56072.1| hnRNPcore protein A1 [Homo sapiens]
gi|1711242|dbj|BAA13162.1| TIS [Mus musculus]
gi|12803103|gb|AAH02355.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|12841583|dbj|BAB25267.1| unnamed protein product [Mus musculus]
gi|15082486|gb|AAH12158.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|16307046|gb|AAH09600.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|21707258|gb|AAH33714.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|26353286|dbj|BAC40273.1| unnamed protein product [Mus musculus]
gi|47125420|gb|AAH70315.1| HNRPA1 protein [Homo sapiens]
gi|49257442|gb|AAH73162.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|49522847|gb|AAH74502.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|51490837|emb|CAH18571.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|51873929|gb|AAH80675.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|53236995|gb|AAH83136.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|55930978|gb|AAH52296.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|56971262|gb|AAH88150.1| Hnrpa1 protein [Rattus norvegicus]
gi|67968511|dbj|BAE00617.1| unnamed protein product [Macaca fascicularis]
gi|74180018|dbj|BAE36552.1| unnamed protein product [Mus musculus]
gi|74183107|dbj|BAE22518.1| unnamed protein product [Mus musculus]
gi|74184983|dbj|BAE39104.1| unnamed protein product [Mus musculus]
gi|74189079|dbj|BAE39302.1| unnamed protein product [Mus musculus]
gi|74204144|dbj|BAE39837.1| unnamed protein product [Mus musculus]
gi|74204330|dbj|BAE39920.1| unnamed protein product [Mus musculus]
gi|74204859|dbj|BAE20929.1| unnamed protein product [Mus musculus]
gi|74214152|dbj|BAE40333.1| unnamed protein product [Mus musculus]
gi|74214339|dbj|BAE40409.1| unnamed protein product [Mus musculus]
gi|86823844|gb|AAI05414.1| Heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|115371763|gb|ABI96206.1| ROA1 [Sus scrofa]
gi|119617167|gb|EAW96761.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617175|gb|EAW96769.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617176|gb|EAW96770.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|146741382|dbj|BAF62347.1| heterogeneous nuclear ribonucleoprotein A1, transcript variant 1
[Pan troglodytes verus]
gi|148671984|gb|EDL03931.1| mCG15678, isoform CRA_b [Mus musculus]
gi|149031879|gb|EDL86791.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|149031881|gb|EDL86793.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|158255662|dbj|BAF83802.1| unnamed protein product [Homo sapiens]
gi|208966454|dbj|BAG73241.1| heterogeneous nuclear ribonucleoprotein A1 [synthetic construct]
gi|296487907|tpg|DAA30020.1| TPA: heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|335772612|gb|AEH58124.1| heterogeneous nuclear ribonucleoprotein A-like protein [Equus
caballus]
gi|380812306|gb|AFE78027.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
gi|380812308|gb|AFE78028.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
Length = 320
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|112421201|ref|NP_001036248.1| heterogeneous nuclear ribonucleoprotein A1 [Macaca mulatta]
gi|2500575|sp|Q28521.3|ROA1_MACMU RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|1332379|gb|AAB01436.1| hnRNP A1-gamma isoform [Macaca mulatta]
Length = 320
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEKVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|119617171|gb|EAW96765.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_e [Homo
sapiens]
Length = 317
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|111306451|gb|AAI21134.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|20257687|gb|AAM16009.1| glycine-rich RNA binding protein [Zea mays]
gi|20257713|gb|AAM16022.1| glycine-rich RNA binding protein [Zea mays]
Length = 149
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G+V E +I+ D T RSRGFGF+TF TE A+ + N EL G + V +A+
Sbjct: 31 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQS 89
>gi|397520388|ref|XP_003830301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 320
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 41.2 bits (95), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + +MRD +T RSRGF F+T+ + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTACVVMRDPNTKRSRGFEFVTYAAVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|469072|dbj|BAA03743.1| RNA-binding gricine-rich protein-1c [Nicotiana sylvestris]
Length = 165
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F Q+G+V E +I+ D T RSRGFGF+TF E+++ D + N +L G + V +A+
Sbjct: 26 FSQYGEVLESKIINDRETGRSRGFGFVTFGDEKSMRDAIEGMNGQDLDGRNITVNEAQS 84
>gi|296490076|tpg|DAA32189.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 361
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 2/70 (2%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+TE + +D+F ++G + +I+ D + + RGFGFITFD VD ++ + N +
Sbjct: 119 ITEDMKEHHLRDYFEKYGKINAIEIVTDGQSGKKRGFGFITFDDHDPVDKIVLQKNHT-I 177
Query: 89 AGAQVEVKKA 98
G + EV+KA
Sbjct: 178 NGHRAEVRKA 187
>gi|198433300|ref|XP_002128655.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A/B
[Ciona intestinalis]
Length = 367
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F +FG V++ I +D T RSRGFGF+ FD + V +L N L G +++ KK
Sbjct: 132 LREYFSKFGVVKDCTIKKDSKTERSRGFGFVLFDDAETVKKVLESENHY-LDGRKIDPKK 190
Query: 98 AEPKK 102
A+ ++
Sbjct: 191 AQAQR 195
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 49/76 (64%), Gaps = 5/76 (6%)
Query: 27 LTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKL 86
+ P TE D K++F Q+G+++E + D +T ++RGF FIT+ + + LA +K
Sbjct: 205 INPDTEN--DVVKEYFTQYGEIEEFERPVDKNTGKNRGFCFITYKKDGCI--KLATASKT 260
Query: 87 -ELAGAQVEVKKAEPK 101
EL G++++VK+A+P+
Sbjct: 261 QELEGSKIDVKEAQPQ 276
>gi|291384352|ref|XP_002708768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K
Sbjct: 24 EMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHK----- 78
Query: 91 AQVEVKKAEPKKPNLPQPSYR 111
V+ + EPK+ L + S R
Sbjct: 79 --VDGRVVEPKRAVLREDSQR 97
>gi|24650838|ref|NP_733252.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|24650840|ref|NP_733253.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
gi|157651|gb|AAA28621.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|16769554|gb|AAL28996.1| LD38464p [Drosophila melanogaster]
gi|23172512|gb|AAN14143.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|23172513|gb|AAN14144.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
Length = 361
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + +L G V+VKK
Sbjct: 134 IRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQH-QLNGKMVDVKK 192
Query: 98 AEPKK 102
A PK+
Sbjct: 193 ALPKQ 197
Score = 40.0 bits (92), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 43 LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKR 101
Query: 98 AEPKK 102
A P++
Sbjct: 102 AVPRQ 106
>gi|195626882|gb|ACG35271.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 203
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 35/58 (60%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F +G+V E +I+ D T RSRGFGF+TF TE A+ + N EL G + V +A+
Sbjct: 85 FSTYGEVLESKIILDRETQRSRGFGFVTFSTEDAMRSAIEGMNGKELDGRNITVNEAQ 142
>gi|74220381|dbj|BAE31416.1| unnamed protein product [Mus musculus]
Length = 320
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|402585407|gb|EJW79347.1| heterogeneous nuclear ribonucleoprotein A1 [Wuchereria bancrofti]
Length = 322
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
+T DE K+F+ ++G + + +MRD +T RSRGFGF++F + VD +A + +
Sbjct: 6 LTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVDAAMANRPHI-I 64
Query: 89 AGAQVEVKKAEPKK 102
G V+ K+A P++
Sbjct: 65 DGKTVDPKRAVPRE 78
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D FK+ F ++G++ + +I+ D +T + RGF FITFD AVD + + + +
Sbjct: 100 EHTEDMFKEHFGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKCVLIKSHM-INNY 158
Query: 92 QVEVKKAEPKK 102
+ +VKKA K+
Sbjct: 159 RCDVKKALSKE 169
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 47.4 bits (111), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 256 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 314
Query: 98 AEPKK 102
A K+
Sbjct: 315 ALSKQ 319
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 159 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 216
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 217 RVVEPKRA 224
>gi|426223452|ref|XP_004005889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKE 184
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|317453642|gb|ADV19029.1| AT02853p [Drosophila melanogaster]
Length = 372
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + +L G V+VKK
Sbjct: 145 IRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQH-QLNGKMVDVKK 203
Query: 98 AEPKK 102
A PK+
Sbjct: 204 ALPKQ 208
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 54 LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKR 112
Query: 98 AEPKK 102
A P++
Sbjct: 113 AVPRQ 117
>gi|357152395|ref|XP_003576105.1| PREDICTED: uncharacterized protein LOC100823193 [Brachypodium
distachyon]
Length = 267
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTE-QAVDDLLAKGNKLELAGAQVEVK 96
++ F +GD+ + +I+ DH + RSRGFGFIT+ E QA ++A K EL G + V
Sbjct: 47 LREAFTHYGDIIDAKIIVDHESRRSRGFGFITYAAEDQAKAAIMALDGK-ELHGRNIRVS 105
Query: 97 KAEPK 101
+A +
Sbjct: 106 EANER 110
>gi|17738267|ref|NP_524543.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|24650836|ref|NP_733251.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
gi|133253|sp|P07909.1|ROA1_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=PEN repeat clone P9;
AltName: Full=hnRNP core protein A1-A
gi|157654|gb|AAA28624.1| nulcear ribonucleoprotein [Drosophila melanogaster]
gi|908757|gb|AAA70426.1| unknown protein [Drosophila melanogaster]
gi|7301687|gb|AAF56801.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|23172511|gb|AAN14142.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
Length = 365
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + +L G V+VKK
Sbjct: 138 IRDYFQHFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQH-QLNGKMVDVKK 196
Query: 98 AEPKK 102
A PK+
Sbjct: 197 ALPKQ 201
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 47 LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKR 105
Query: 98 AEPKK 102
A P++
Sbjct: 106 AVPRQ 110
>gi|359073189|ref|XP_003587038.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNK--LEL 88
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K EL
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDVAMNARPHKGTEEL 83
Query: 89 AGAQVEVKKAEPKKP 103
+ V + + ++P
Sbjct: 84 WELKRAVSREDSQRP 98
>gi|148230657|ref|NP_001081318.1| heterogeneous nuclear ribonucleoprotein A3 homolog 1 [Xenopus
laevis]
gi|1710625|sp|P51968.1|RO31_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 1;
AltName: Full=hnRNP A3(A)
gi|214745|gb|AAA49949.1| ribonucleoprotein [Xenopus laevis]
Length = 373
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F Q+G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 37 ETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVD--G 94
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 95 RVVEPKRA 102
>gi|358415649|ref|XP_003583166.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 44/78 (56%), Gaps = 9/78 (11%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKL---- 86
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K+
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDVAMNARPHKVDGRV 83
Query: 87 -ELAGAQVEVKKAEPKKP 103
EL A V + + ++P
Sbjct: 84 GELKRA---VSREDSQRP 98
>gi|359063952|ref|XP_003585907.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 320
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHSCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGF F+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|7024451|dbj|BAA92156.1| glycine-rich RNA-binding protein [Citrus unshiu]
Length = 167
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 3/71 (4%)
Query: 29 PVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLEL 88
T+ +L E F +GD+ E +I+ D T RSRGFGF+TF E+++ D + N L
Sbjct: 18 ATTDSSLHEA---FSAYGDILESKIINDRETGRSRGFGFVTFRDEKSMRDAIEGMNGQNL 74
Query: 89 AGAQVEVKKAE 99
G + V +A+
Sbjct: 75 DGRNITVNEAQ 85
>gi|119617173|gb|EAW96767.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_g [Homo
sapiens]
Length = 319
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 76 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 134
Query: 98 AEPKK 102
A K+
Sbjct: 135 ALSKQ 139
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 54 MRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 98
MRD +T RSRGFGF+T+ T + VD + A+ +K++ G VE K+A
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--GRVVEPKRA 44
>gi|392334561|ref|XP_003753212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Rattus
norvegicus]
Length = 356
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ K + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVQKYHTIN--GHNCEVKK 177
Query: 98 AEPKK 102
A K+
Sbjct: 178 ALSKQ 182
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 45/75 (60%), Gaps = 3/75 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKAEPKKPNL 105
VE K+A ++ +L
Sbjct: 81 RVVEPKRAVSREDSL 95
>gi|357473263|ref|XP_003606916.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507971|gb|AES89113.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 190
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +FG++ + +++ D T RSRGFGF+TF E+++ D + + N ++ G + V +A+
Sbjct: 28 FSKFGEITDSKVINDRETGRSRGFGFVTFAEEKSMRDAIEEMNGQDIDGRNITVNEAQS 86
>gi|34851124|gb|AAL13082.1| putative glycine-rich RNA-binding protein [Prunus avium]
Length = 178
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F FG++ E +I+ D T RSRGFGF+TF E+A+ D + N L G + V
Sbjct: 22 DALERAFSPFGEIIESKIINDRETGRSRGFGFVTFSNEKAMRDAIEGMNGQNLDGRNITV 81
Query: 96 KKAE 99
+A+
Sbjct: 82 NEAQ 85
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ K +F +FG V+ ++ D + ++ R F F+TF+ E +V DL+ + K ++ + ++K
Sbjct: 129 DIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSV-DLVCREPKQKIGNKECDIK 187
Query: 97 KAEPK 101
KA PK
Sbjct: 188 KATPK 192
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ +++F +FG V + I D +T +SRGFGF+TF+ + A++ +L K + G Q++ K
Sbjct: 47 DLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDPK 105
Query: 97 --KAEP 100
KA P
Sbjct: 106 PAKARP 111
>gi|296211878|ref|XP_002752596.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Callithrix
jacchus]
Length = 327
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 76 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 134
Query: 98 AEPKK 102
A K+
Sbjct: 135 ALSKQ 139
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 32/46 (69%), Gaps = 3/46 (6%)
Query: 54 MRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 98
MRD +T RSRGFGF+T+ T + VD + A+ +K++ G VE K+A
Sbjct: 1 MRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--GRVVEPKRA 44
>gi|357619641|gb|EHJ72131.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 315
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ +++F +G+VQ I+ D T + RGFGF+ FD VD + ++ G Q++V
Sbjct: 122 EQLREYFSNYGNVQNVSIVTDKGTGKKRGFGFVEFDDYDPVDKICLNA-PHKINGKQLDV 180
Query: 96 KKAEPK 101
KKA PK
Sbjct: 181 KKALPK 186
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDL-LAKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ VDD L + ++++ G VE K
Sbjct: 33 LKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVDDAQLNRPHRID--GRMVETK 90
Query: 97 KA 98
+A
Sbjct: 91 RA 92
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 186 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 244
Query: 98 AEPKK 102
A K+
Sbjct: 245 ALSKQ 249
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 93 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 150
Query: 95 VKKA 98
K+A
Sbjct: 151 PKRA 154
>gi|402217291|gb|EJT97372.1| RNA-binding domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 167
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F QFG V + +M+D + RSRGFGF+TF T Q + N+ +L G ++ V
Sbjct: 27 DTLRSAFSQFGQVLDCIVMKDRESGRSRGFGFVTFGTSQEAQAAIDGLNEQDLDGRRIRV 86
Query: 96 KKAEPKKP 103
A + P
Sbjct: 87 NLANARPP 94
>gi|358059890|dbj|GAA94320.1| hypothetical protein E5Q_00970 [Mixia osmundae IAM 14324]
Length = 173
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F Q+G+V + +M+D T RSRGFGF+T A + + N +L G QV V KA +
Sbjct: 41 FSQYGEVTDCIVMKDRETGRSRGFGFVTMSDPAAAEQAIEALNNGDLDGRQVRVDKAADR 100
>gi|21388660|dbj|BAC00786.1| glycine-rich RNA-binding protein [Physcomitrella patens]
Length = 178
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F FG+V + +++ D T RSRGFGF+TF E ++++ + N EL G + V +
Sbjct: 21 LEEAFRPFGEVVQCKVITDRETGRSRGFGFVTFADENSMNEAIKDMNGKELDGRNITVNQ 80
Query: 98 A 98
A
Sbjct: 81 A 81
>gi|296216773|ref|XP_002754712.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEMIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+ + + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVRYAAVEEVDAAMNARSHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|109131409|ref|XP_001082949.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Macaca mulatta]
gi|297304279|ref|XP_001082690.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Macaca mulatta]
Length = 320
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYH-PVNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 40 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA 98
D+F ++G +++ +++D ST RS+GFGF+TF+TE D + L Q++VK+A
Sbjct: 31 DYFSKYGKIEDCVVIKDSSTGRSKGFGFVTFETEAEADACM-DDRPHTLNSRQIDVKRA 88
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K++F QFG ++ ++ + + + RGF FITF+ VD L+AK + + G + EVKK
Sbjct: 120 LKEYFGQFGTIETFELPLERDSEKPRGFAFITFEDHDTVDKLVAKRHHY-VNGVRCEVKK 178
Query: 98 A 98
A
Sbjct: 179 A 179
>gi|410914421|ref|XP_003970686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Takifugu rubripes]
Length = 300
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLAKGNKLELAGAQVEVK 96
D+F QFG V++ +I+ D T + RGFGF+ F DT+ A +L + + ++G +VE K
Sbjct: 113 LTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFVDTDSATKAVLTRYHT--ISGNKVEAK 170
Query: 97 KAEPKK 102
KA K+
Sbjct: 171 KAMTKQ 176
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+ +F ++G + + ++ ++ RSR FGFIT+ T + D +A + + G VE+K+
Sbjct: 22 LRQYFEKYGQLSDCVVVMNNQLGRSRCFGFITYSTPEEADTAMAASPHV-VDGHNVELKR 80
Query: 98 AEPKK 102
A ++
Sbjct: 81 AVARQ 85
>gi|348570610|ref|XP_003471090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 356
Score = 47.0 bits (110), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MR T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDRVVMRVPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + ++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMC-ARPYKVDGR 81
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 82 VVEPKRA 88
>gi|195353064|ref|XP_002043030.1| GM16385 [Drosophila sechellia]
gi|194127095|gb|EDW49138.1| GM16385 [Drosophila sechellia]
Length = 363
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F FG++ + I+ D T + RGF F+ FD VD ++ + +L G V+VKK
Sbjct: 136 IRDYFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKVVLQKQH-QLNGKMVDVKK 194
Query: 98 AEPKK 102
A PK+
Sbjct: 195 ALPKQ 199
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K F ++G++ + +M+D T RSRGFGFIT+ +D+ K ++ G VE K+
Sbjct: 45 LKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYSHSSMIDE-AQKSRPHKIDGRVVEPKR 103
Query: 98 AEPKK 102
A P++
Sbjct: 104 AVPRQ 108
>gi|402908392|ref|XP_003916927.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Papio anubis]
Length = 343
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 113 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 171
Query: 98 AEPKK 102
A K+
Sbjct: 172 ALSKQ 176
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 16 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 73
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 74 RVVEPKRA 81
>gi|440908270|gb|ELR58311.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 315
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 120 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFG +T+ T + VD + A+ +K++ G
Sbjct: 23 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGLVTYATVEEVDAAMNARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RAVEPKRA 88
>gi|111162637|gb|ABH07505.1| glycine-rich RNA-binding protein [Nicotiana attenuata]
Length = 152
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 4/63 (6%)
Query: 40 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL--AKGNKLELAGAQVEVKK 97
D F QFG++ + +I+ D T RSRGFGF+TF E+A+ D + KG L+ G + V +
Sbjct: 24 DAFSQFGEILDSKIINDRETGRSRGFGFVTFKDEKAMRDAIEGMKGQDLD--GRNITVNE 81
Query: 98 AEP 100
A+
Sbjct: 82 AQS 84
>gi|442761959|gb|JAA73138.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Ixodes ricinus]
Length = 218
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ +D+F QFG++ ++ + T R RGF F+ +D VD ++ K + + L G + EVK
Sbjct: 29 DLRDYFAQFGNILSVNLVTEKETGRKRGFAFVEYDDYDPVDKIVLKRHHM-LKGKRTEVK 87
Query: 97 KA 98
KA
Sbjct: 88 KA 89
>gi|75319742|sp|Q43472.1|GRP_HORVU RecName: Full=Glycine-rich RNA-binding protein blt801; AltName:
Full=Low temperature-responsive RNA-binding protein
gi|1229138|gb|AAB07749.1| low temperature-responsive RNA-binding protein [Hordeum vulgare
subsp. vulgare]
Length = 161
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 40/63 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F ++GDV + +I+ D T RSRGFGF+TF +++A+ + N +L G + V +A+ +
Sbjct: 26 FSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNEAQSR 85
Query: 102 KPN 104
+ +
Sbjct: 86 RSD 88
>gi|2196542|gb|AAB61213.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 197
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 30/48 (62%)
Query: 52 QIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
QI+ D T RSRGFGF+TF EQA+ D + N EL G + V +A+
Sbjct: 74 QIINDRETGRSRGFGFVTFSNEQAMRDAIQGMNGKELDGRNITVNEAQ 121
>gi|296209042|ref|XP_002751365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Callithrix jacchus]
Length = 375
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 44 QFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 98
Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G VE K+A
Sbjct: 36 QWGTLTDCVVMRDANTKRSRGFGFVTYATVEEVDAAMNARPHKVD--GRVVEPKRA 89
>gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus]
Length = 313
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.4 bits (106), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|390465683|ref|XP_003733453.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|119607517|gb|EAW87111.1| hCG1984888, isoform CRA_a [Homo sapiens]
Length = 249
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV K
Sbjct: 50 LRDYFEQYGKIEVIEIMSDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVTK 108
Query: 98 AEPKK 102
A K+
Sbjct: 109 ALSKQ 113
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F +G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 134 LRDYFQSYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 192
Query: 98 AEPKK 102
A K+
Sbjct: 193 ALSKQ 197
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E D ++ F Q+G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 37 ETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVD--G 94
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 95 RVVEPKRA 102
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 144 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 202
Query: 98 AEPKK 102
A K+
Sbjct: 203 ALSKQ 207
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD +A ++ G
Sbjct: 47 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMA-ARPHKVDGR 105
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 106 VVEPKRA 112
>gi|469071|dbj|BAA03742.1| RNA-binding glycine-rich protein-1b [Nicotiana sylvestris]
gi|295393565|gb|ADG03638.1| RNA-binding glycine-rich protein [Nicotiana tabacum]
Length = 148
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
D F +G+V + +I+ D T RSRGFGF+TF E+ + D + N EL G + V +
Sbjct: 22 LADAFGTYGEVLDSKIINDRETGRSRGFGFVTFKDEKCMRDAIEGMNGQELDGRSITVNE 81
Query: 98 AEPK 101
A+ +
Sbjct: 82 AQAR 85
>gi|449546812|gb|EMD37781.1| hypothetical protein CERSUDRAFT_73600 [Ceriporiopsis subvermispora
B]
Length = 195
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 53 IMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
+MRD T RSRGFGF+T+ + D ++ N+ EL G +++V A P+
Sbjct: 60 VMRDRDTGRSRGFGFVTYSSSMEADSAISNLNEQELDGRRIKVNLANPR 108
>gi|296188846|ref|XP_002742529.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 46.6 bits (109), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDANTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|402908388|ref|XP_003916925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Papio anubis]
gi|402908390|ref|XP_003916926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Papio anubis]
Length = 351
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|169596084|ref|XP_001791466.1| hypothetical protein SNOG_00791 [Phaeosphaeria nodorum SN15]
gi|160701225|gb|EAT92286.2| hypothetical protein SNOG_00791 [Phaeosphaeria nodorum SN15]
Length = 302
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 6/80 (7%)
Query: 33 PAL--DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDT-EQAVDDLLAKGNKLEL- 88
P+L +E F ++G+V++ IMRD T SRGFGF+ T EQA D +G + E+
Sbjct: 76 PSLTEEEVTRLFEKYGEVEQCNIMRDPHTKDSRGFGFVKMVTAEQA--DAAKEGLQGEVH 133
Query: 89 AGAQVEVKKAEPKKPNLPQP 108
G + ++KA +P P P
Sbjct: 134 QGRTLSIEKARRARPRTPTP 153
>gi|395835057|ref|XP_003790500.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Otolemur
garnettii]
Length = 373
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 43.5 bits (101), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLE-LAGAQVE 94
D +D+F ++G ++ ++ D T + RGF F+TFD VD ++ G K + + E
Sbjct: 118 DHLRDYFSKYGSIESVDVISDKDTGKKRGFAFVTFDDHDPVDKIV--GLKYHTINDHKSE 175
Query: 95 VKKAEPKK 102
VKKA PK+
Sbjct: 176 VKKAVPKQ 183
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D K F ++G++ + +M+D +T +SRGFGFIT+ VDD + + ++ G
Sbjct: 23 ETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYKRASMVDDAM-RSRPHKIDGR 81
Query: 92 QVEVKKA 98
+VE K+A
Sbjct: 82 EVEPKRA 88
>gi|71013156|ref|XP_758559.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
gi|46098217|gb|EAK83450.1| hypothetical protein UM02412.1 [Ustilago maydis 521]
Length = 192
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D F +G + ++ +M+D T RSRGFGF+TF T+ D +A N+ EL G ++ V
Sbjct: 17 DSLAHAFSTYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAALNEQELDGRRIRV 76
Query: 96 KKAEPK 101
A +
Sbjct: 77 NMANSR 82
>gi|291389294|ref|XP_002711081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Oryctolagus
cuniculus]
Length = 371
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|291402431|ref|XP_002717571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|116197981|ref|XP_001224802.1| hypothetical protein CHGG_07146 [Chaetomium globosum CBS 148.51]
gi|88178425|gb|EAQ85893.1| hypothetical protein CHGG_07146 [Chaetomium globosum CBS 148.51]
Length = 374
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA--KGNKLELAGAQVE 94
E F ++G+V++ QIM+D + SRGFGF+ T + D + +G +E G +
Sbjct: 85 EITRLFEKYGEVEKCQIMKDPHSGESRGFGFVKMVTSEMADAAIEGLRGEVIE--GRTLN 142
Query: 95 VKKAEPKKPNLPQP 108
++KA +P P P
Sbjct: 143 IEKARRVRPRTPTP 156
>gi|402864694|ref|XP_003896588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 320
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDCFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTEESLRSHFEQWGTLADCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|355564301|gb|EHH20801.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
mulatta]
Length = 372
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Homo sapiens]
gi|397472158|ref|XP_003807623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Pan
paniscus]
gi|288558857|sp|P09651.5|ROA1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=hnRNP core protein A1
gi|119617168|gb|EAW96762.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|119617174|gb|EAW96768.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|380812310|gb|AFE78029.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Macaca
mulatta]
Length = 372
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|335347347|ref|NP_001229438.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
gi|410964601|ref|XP_003988842.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Felis catus]
gi|426224339|ref|XP_004006329.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Ovis aries]
gi|74222222|dbj|BAE26919.1| unnamed protein product [Mus musculus]
gi|149031878|gb|EDL86790.1| rCG50547, isoform CRA_b [Rattus norvegicus]
gi|149031880|gb|EDL86792.1| rCG50547, isoform CRA_b [Rattus norvegicus]
Length = 373
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|85060507|ref|NP_001034218.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Mus musculus]
gi|59808855|gb|AAH89340.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|62531241|gb|AAH92395.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|74144667|dbj|BAE27318.1| unnamed protein product [Mus musculus]
gi|74185136|dbj|BAE39169.1| unnamed protein product [Mus musculus]
gi|74219989|dbj|BAE40574.1| unnamed protein product [Mus musculus]
Length = 373
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|112994|sp|P10979.1|GRPA_MAIZE RecName: Full=Glycine-rich RNA-binding, abscisic acid-inducible
protein
gi|22313|emb|CAA31077.1| ABA-inducible gene protein [Zea mays]
gi|195605904|gb|ACG24782.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195617536|gb|ACG30598.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195620254|gb|ACG31957.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195637320|gb|ACG38128.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|226091|prf||1410284A abscisic acid inducible gene
Length = 157
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F +G++ + +++ D T RSRGFGF+TF +E ++ D + N EL G + V +
Sbjct: 24 LENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQ 83
Query: 98 AEP 100
A+
Sbjct: 84 AQS 86
>gi|413933457|gb|AFW68008.1| responsive to abscisic acid15 [Zea mays]
Length = 159
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F +G++ + +++ D T RSRGFGF+TF +E ++ D + N EL G + V +
Sbjct: 24 LENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQ 83
Query: 98 AEP 100
A+
Sbjct: 84 AQS 86
>gi|226491203|ref|NP_001151562.1| glycine-rich RNA-binding protein 2 [Zea mays]
gi|195647746|gb|ACG43341.1| glycine-rich RNA-binding protein 2 [Zea mays]
Length = 156
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F +G++ + +++ D T RSRGFGF+TF +E ++ D + N EL G + V +
Sbjct: 24 LENAFASYGEILDSKVITDRETGRSRGFGFVTFSSENSMLDAIENMNGKELDGRNITVNQ 83
Query: 98 AEP 100
A+
Sbjct: 84 AQS 86
>gi|119923161|ref|XP_001251082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2
isoform 2 [Bos taurus]
gi|297471765|ref|XP_002685448.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2 [Bos
taurus]
gi|296490543|tpg|DAA32656.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 43/67 (64%), Gaps = 4/67 (5%)
Query: 34 ALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGA 91
+DE + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 25 TIDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAAMNARPHKVD--GR 82
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 83 AVEPKRA 89
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G +V+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDQGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCQVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|109109572|ref|XP_001086138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein
A1-like 3-like isoform 2 [Macaca mulatta]
Length = 320
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAAINARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|296209046|ref|XP_002751367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Callithrix jacchus]
Length = 320
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 44 QFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 98
Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G VE K+A
Sbjct: 36 QWGTLTDCVVMRDANTKRSRGFGFVTYATVEEVDAAMNARPHKVD--GRVVEPKRA 89
>gi|355766014|gb|EHH62484.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
fascicularis]
Length = 372
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|1346181|sp|P49311.1|GRP2_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP2A
gi|496237|gb|AAA59213.1| homology with RNA-binding proteins in meristematic tissue
[Sinapis alba]
Length = 169
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F QFG++ + +I+ D T RSRGFGF+TF E+++ D + N +L G + V +A+
Sbjct: 28 FSQFGELVDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|171912058|ref|ZP_02927528.1| RNA-binding region RNP-1 [Verrucomicrobium spinosum DSM 4136]
Length = 150
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ ++ F Q+G V E + D T R RGF F+ DT++A+D + N LE G + V
Sbjct: 18 DVRELFSQYGAVTEVSLPTDRDTGRPRGFAFVAMDTKEAMDAAIKGLNGLEWMGRALTVN 77
Query: 97 KAEPKK 102
+A P++
Sbjct: 78 EARPRE 83
>gi|168015710|ref|XP_001760393.1| predicted protein [Physcomitrella patens subsp. patens]
gi|21388658|dbj|BAC00785.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|76262794|gb|ABA41484.1| glycine-rich RNA binding protein [Physcomitrella patens]
gi|162688407|gb|EDQ74784.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 162
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 36/58 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F FG+V + +++ D T RSRGFGF+TF E +++ + + N EL G + V +A+
Sbjct: 27 FRPFGEVVQSKVISDRETGRSRGFGFVTFADENSMNAAIKEMNGQELDGRNITVNQAQ 84
>gi|147905111|ref|NP_001081320.1| heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Xenopus
laevis]
gi|1710626|sp|P51992.1|RO32_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 2;
AltName: Full=hnRNP A3(B)
gi|214747|gb|AAA49950.1| ribonucleoprotein [Xenopus laevis]
Length = 385
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F Q+G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 37 ETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVD--G 94
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 95 RVVEPKRA 102
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGNKLELAGAQVEVK 96
+D+F +G ++ ++M D + + RGF F+TFD VD ++ K + + L EVK
Sbjct: 134 LRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNC--EVK 191
Query: 97 KAEPKK 102
KA K+
Sbjct: 192 KALSKQ 197
>gi|148671983|gb|EDL03930.1| mCG15678, isoform CRA_a [Mus musculus]
Length = 371
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 119 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 177
Query: 98 AEPKK 102
A K+
Sbjct: 178 ALSKQ 182
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 22 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 79
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 80 RVVEPKRA 87
>gi|41053816|ref|NP_956789.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|33416839|gb|AAH55499.1| Zgc:66127 [Danio rerio]
Length = 388
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ +++F QFG + E IM + ++ + RGF FITFD AVD ++ + + G EV
Sbjct: 120 EHLREYFGQFGKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRIVIQKYHT-VNGHNCEV 178
Query: 96 KKA 98
+KA
Sbjct: 179 RKA 181
Score = 38.9 bits (89), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 38/58 (65%), Gaps = 3/58 (5%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 98
F Q+G + + +MRD +T RSRGFGF+T+ + VD + A+ +K++ G VE K+A
Sbjct: 35 FEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVGEVDAAMDARPHKVD--GRAVEPKRA 90
>gi|291415461|ref|XP_002723970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|1346180|sp|P49310.1|GRP1_SINAL RecName: Full=Glycine-rich RNA-binding protein GRP1A
gi|496233|gb|AAA59212.1| homology with RNA-binding proteins in meristematic tissue
[Sinapis alba]
Length = 166
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 37/58 (63%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F Q+G+V + +I+ D T RSRGFGF+TF E+++ D + N +L G + V +A+
Sbjct: 28 FSQYGEVLDSKIINDRETGRSRGFGFVTFKDEKSMKDAIEGMNGQDLDGRSITVNEAQ 85
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|291389273|ref|XP_002711072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + R F F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|321260943|ref|XP_003195191.1| glycine-rich RNA binding protein [Cryptococcus gattii WM276]
gi|317461664|gb|ADV23404.1| Glycine-rich RNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 177
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D F +G V + +M+D T RSRGFGF+T+ + Q + +A N+ EL G +V V
Sbjct: 18 DTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRV 77
Query: 96 KKAEPK 101
A +
Sbjct: 78 NMANSR 83
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 174 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 232
Query: 98 AEPKK 102
A K+
Sbjct: 233 ALSKQ 237
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 77 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 134
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 135 RVVEPKRA 142
>gi|402882999|ref|XP_003905018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Papio
anubis]
Length = 378
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 45 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 102
Query: 91 AQVEVKKA 98
VE KKA
Sbjct: 103 RVVEPKKA 110
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + GF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKTGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 AEPKK 102
A K+
Sbjct: 201 ALSKQ 205
>gi|395540858|ref|XP_003772367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Sarcophilus
harrisii]
Length = 372
Score = 46.6 bits (109), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|402911238|ref|XP_003918244.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 321
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 40 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
D+F Q+G ++ +IM D + + RGF F+TFD +VD L+ + + G EV+K
Sbjct: 124 DYFEQYGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKLVVQKYHA-VNGHNCEVRKVL 182
Query: 100 PKK 102
K+
Sbjct: 183 SKQ 185
>gi|344266093|ref|XP_003405115.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Loxodonta africana]
Length = 370
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|390464176|ref|XP_003733182.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Callithrix jacchus]
Length = 320
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFDTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|148237075|ref|NP_001082414.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus laevis]
gi|27735460|gb|AAH41277.1| LOC398455 protein, partial [Xenopus laevis]
gi|77748282|gb|AAI06306.1| LOC398455 protein [Xenopus laevis]
Length = 308
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + F QFG V++ +++ D T + RGFGF+ F++ + D A + G +VEVK
Sbjct: 118 DLLEHFSQFGPVEKVEVIADKLTGKKRGFGFVYFNSHDSADK-AAVVKFHSVNGHRVEVK 176
Query: 97 KAEPKKPNLPQPSYRRY 113
KA PK+ L Q S R +
Sbjct: 177 KAVPKE-ELSQGSNRSF 192
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Ovis aries]
Length = 310
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|62027493|gb|AAH92083.1| Hnrpa3 protein, partial [Mus musculus]
Length = 263
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 26 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 84
Query: 98 AEPKK 102
A K+
Sbjct: 85 ALSKQ 89
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Ovis aries]
Length = 319
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|58269652|ref|XP_571982.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57228218|gb|AAW44675.1| glycine-rich RNA binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 182
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D F +G V + +M+D T RSRGFGF+T+ + Q + +A N+ EL G +V V
Sbjct: 18 DTLLQVFSAYGTVTDCIVMKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRV 77
Query: 96 KKAEPK 101
A +
Sbjct: 78 NMANSR 83
>gi|426341485|ref|XP_004036065.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Gorilla gorilla gorilla]
Length = 320
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|344284648|ref|XP_003414077.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Loxodonta africana]
Length = 372
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+ +F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRHYFEQYGKIEVIEIMTDQGSGKKRGFVFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
K+
Sbjct: 180 VLSKQ 184
>gi|1934994|emb|CAA73034.1| SGRP-1 [Solanum commersonii]
Length = 162
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
D F +G+V + +I+ D T RSRGFGF+TF E+++ + ++ N EL G + V +
Sbjct: 23 LSDAFSTYGEVVDSKIINDRETGRSRGFGFVTFKDEKSMKEAISGMNGSELDGRNITVNE 82
Query: 98 AEP 100
A+
Sbjct: 83 AQA 85
>gi|241627626|ref|XP_002408070.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215501115|gb|EEC10609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 353
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ K +F +FG V+ ++ D + ++ R F F+TF+ E +V +L+ + K ++ + ++K
Sbjct: 158 DIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDSV-ELVCREPKQKIGNKECDIK 216
Query: 97 KAEPK 101
KA PK
Sbjct: 217 KATPK 221
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ +++F +FG V + I D +T +SRGFGF+TF ++A++ +L K + G Q++ K
Sbjct: 76 DLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFTAKEAIEAVL-KATPHTVKGKQIDPK 134
Query: 97 --KAEP 100
KA P
Sbjct: 135 PAKARP 140
>gi|47182330|emb|CAG14268.1| unnamed protein product [Tetraodon nigroviridis]
Length = 197
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 42/69 (60%), Gaps = 3/69 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLAKGNKLELAGAQVE 94
+ D+F QFG V++ +I+ D T + RGFGF+ F DT+ A +L + + ++G +VE
Sbjct: 35 EHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFVDTDSATKAVLTRYHT--ISGNKVE 92
Query: 95 VKKAEPKKP 103
KKA K+
Sbjct: 93 AKKAMTKQE 101
>gi|390331824|ref|XP_003723360.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Strongylocentrotus purpuratus]
Length = 360
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL--AKGNKLELAGAQV 93
D K++F QFG++ + +++D ++ +S+GFGF+TF + + V+ ++ K N L V
Sbjct: 27 DNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKEVNKVMGARKENPHRLDNRAV 86
Query: 94 EVKKAEPKKPNLPQ-PSYRRY 113
+V++A + P+ PS++ +
Sbjct: 87 DVRRAMARDEKGPKNPSFKCF 107
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 AISKQ 183
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|291402433|ref|XP_002717572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIIIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|55250278|gb|AAH85474.1| Hnrpa3 protein [Mus musculus]
Length = 313
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 76 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 134
Query: 98 AEPKK 102
A K+
Sbjct: 135 ALSKQ 139
Score = 37.0 bits (84), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 54 MRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVEVKKA 98
MRD T RSRGFGF+T+ + VD + A+ +K++ G VE K+A
Sbjct: 1 MRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVEPKRA 44
>gi|49522060|gb|AAH71067.1| LOC398455 protein [Xenopus laevis]
Length = 303
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + F QFG V++ +++ D T + RGFGF+ F++ + D A + G +VEVK
Sbjct: 113 DLLEHFSQFGPVEKVEVIADKLTGKKRGFGFVYFNSHDSADK-AAVVKFHSVNGHRVEVK 171
Query: 97 KAEPKKPNLPQPSYRRY 113
KA PK+ L Q S R +
Sbjct: 172 KAVPKE-ELSQGSNRSF 187
>gi|148666221|gb|EDK98637.1| mCG119114, isoform CRA_a [Mus musculus]
Length = 357
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 75 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 133
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 134 VVEPKRA 140
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 172 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 230
Query: 98 A 98
A
Sbjct: 231 A 231
>gi|126290015|ref|XP_001367952.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Monodelphis domestica]
Length = 486
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F + A D + K + ++ G +VEV
Sbjct: 295 DLVEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQ--GHRVEV 352
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 353 KKAVPKE 359
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|74096251|ref|NP_001027768.1| glycine rich RNA binding protein [Ciona intestinalis]
gi|5911800|emb|CAB56042.1| glycine rich RNA binding protein [Ciona intestinalis]
Length = 162
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ + F G V+E I+ D T RSRGF F+TF +E +D + N+ ++ G V V
Sbjct: 18 DDLRKHFSGSGQVEEVAIICDRETGRSRGFAFVTFSSEGEANDAIENLNESDVRGRNVSV 77
Query: 96 KKAEPKKP 103
++A+ K+
Sbjct: 78 RQAQSKRD 85
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like, partial
[Monodelphis domestica]
Length = 356
Score = 45.8 bits (107), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 118 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 176
Query: 98 AEPKK 102
A K+
Sbjct: 177 ALSKQ 181
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 21 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 78
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 79 RVVEPKRA 86
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 19 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 77
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 78 VVEPKRA 84
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|15239505|ref|NP_200911.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
gi|9759450|dbj|BAB10366.1| unnamed protein product [Arabidopsis thaliana]
gi|16974556|gb|AAL31194.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|21928059|gb|AAM78058.1| AT5g61030/maf19_30 [Arabidopsis thaliana]
gi|225879144|dbj|BAH30642.1| hypothetical protein [Arabidopsis thaliana]
gi|332010031|gb|AED97414.1| glycine-rich RNA-binding protein 3 [Arabidopsis thaliana]
Length = 309
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D ++ F ++G+V + +++ D T RSRGFGF+TF + +A + + +L G V+V
Sbjct: 54 DSLREAFTKYGEVVDTRVILDRETGRSRGFGFVTFTSSEAASSAIQALDGRDLHGRVVKV 113
Query: 96 KKAEPK 101
A +
Sbjct: 114 NYANDR 119
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHSCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRAVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|148679912|gb|EDL11859.1| mCG122300 [Mus musculus]
Length = 317
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+ ++G ++ ++M D + + RGF F+TFD +D ++ + + G EVKK
Sbjct: 86 LRDYSEKYGKIETIEVMEDRQSEKKRGFAFVTFDDHDTLDKIVVQKYHT-INGHNCEVKK 144
Query: 98 AEPKK 102
A K+
Sbjct: 145 ALSKQ 149
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|194388148|dbj|BAG65458.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFATYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|115629158|ref|XP_779906.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like isoform 1 [Strongylocentrotus purpuratus]
Length = 360
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL--AKGNKLELAGAQV 93
D K++F QFG++ + +++D ++ +S+GFGF+TF + + V+ ++ K N L V
Sbjct: 27 DNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKEVNKVMGARKENPHRLDNRAV 86
Query: 94 EVKKAEPKKPNLPQ-PSYRRY 113
+V++A + P+ PS++ +
Sbjct: 87 DVRRAMARDEKGPKNPSFKCF 107
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHSCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|37747847|gb|AAH59107.1| Hnrpa2b1 protein, partial [Mus musculus]
Length = 219
Score = 45.8 bits (107), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 34 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 92
Query: 98 A 98
A
Sbjct: 93 A 93
>gi|397514507|ref|XP_003827523.1| PREDICTED: uncharacterized protein LOC100981942 [Pan paniscus]
Length = 363
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD +D ++ + G EVKK
Sbjct: 126 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDIIDKIVVQKYHT-TNGHNCEVKK 184
Query: 98 AEPKK 102
A K+
Sbjct: 185 ALSKQ 189
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D K F ++G + + +M+D T RSRGFGFIT+ VD+ K ++ G VE
Sbjct: 41 DNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITYSHSSMVDE-AQKARPHKIDGRVVEP 99
Query: 96 KKAEPKK 102
K+A P++
Sbjct: 100 KRAVPRQ 106
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
Score = 43.9 bits (102), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 106
Query: 95 VKKA 98
K+A
Sbjct: 107 PKRA 110
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD-TEQAVDDLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ E+ L A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVAAALCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|344246565|gb|EGW02669.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 261
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 76 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 134
Query: 98 AEPKK 102
A K+
Sbjct: 135 ALSKQ 139
>gi|197101465|ref|NP_001127331.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pongo abelii]
gi|75070806|sp|Q5RBU8.1|ROA2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|55728019|emb|CAH90762.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + + G EV+K
Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKHHT-INGHNAEVRK 186
Query: 98 A 98
A
Sbjct: 187 A 187
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 31 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 89
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 90 VVEPKRA 96
>gi|291415463|ref|XP_002723971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDHFEQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|406866241|gb|EKD19281.1| glycine-rich RNA-binding protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 423
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 9/102 (8%)
Query: 6 TEILTMFINRQTTTQKMTGLSLTPVTEPAL-------DE--FKDFFMQFGDVQEHQIMRD 56
T+ L +F RQ+ + ++ T+ L DE + F +FG V+E +++D
Sbjct: 135 TQFLPLFRRRQSNNIVVQSTNIIITTDNTLNGLAWHTDENALRQKFEEFGAVEEAVVVKD 194
Query: 57 HSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA 98
T RSRGFGF+ + +E + + N +E G + V KA
Sbjct: 195 RDTGRSRGFGFVRYGSEADAEAAITAMNNIEFDGRTIRVDKA 236
>gi|403296845|ref|XP_003939304.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Saimiri
boliviensis boliviensis]
Length = 320
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|291389618|ref|XP_002711396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T SRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|291389616|ref|XP_002711395.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 45.8 bits (107), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDHFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T SRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|405977263|gb|EKC41722.1| Heterogeneous nuclear ribonucleoprotein A2-like protein 1
[Crassostrea gigas]
Length = 363
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K +F ++G + + +M D T RSRGFGFIT++ +D+ A ++ G +VE K+
Sbjct: 58 LKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYEKVAMLDECQA-NRPHKIDGREVETKR 116
Query: 98 AEPKK 102
A P++
Sbjct: 117 AMPRE 121
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 31/99 (31%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ ++ F ++G+++ ++++D +T+++RGF F+TFD VD + K + ++ VEV
Sbjct: 147 DDVREAFQEYGNIKNIELIKDKATNKTRGFCFVTFDDYDPVDKCVLKK-RFKICDKDVEV 205
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGYGGG 134
KKAE K G
Sbjct: 206 KKAENK------------------------------NEG 214
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHSCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RAVEPKRA 88
>gi|2331131|gb|AAB66884.1| glycine-rich protein [Oryza sativa Japonica Group]
Length = 162
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
F +G++ + +I+ D T RS GFGFITF +EQ++ D + N EL G + V +A+
Sbjct: 28 FSTYGEILDSKIINDRETGRSLGFGFITFSSEQSMRDAIEGMNGKELDGRNITVNEAQ 85
>gi|297278811|ref|XP_001114493.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Macaca
mulatta]
Length = 491
Score = 45.8 bits (107), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 39/56 (69%), Gaps = 3/56 (5%)
Query: 44 QFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 98
Q+G + + ++RD +T RSRGFGF+T+ T Q VD ++ A+ +K++ G VE K+A
Sbjct: 157 QWGTLMDCVVLRDPNTKRSRGFGFVTYATVQEVDAVMNARPHKVD--GRAVETKRA 210
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 40 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
D+F QFG ++ +IM D + + GF F+TFD ++D ++ + + EV+KA
Sbjct: 244 DYFQQFGKMEVIEIMTDRGSGKKSGFAFVTFDNHDSMDKIVIQKYH-TVNSHNCEVRKAL 302
Query: 100 PKK 102
K+
Sbjct: 303 SKQ 305
>gi|417409751|gb|JAA51367.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 328
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 46 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 104
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 105 VVEPKRA 111
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 45.4 bits (106), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 120 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|348519655|ref|XP_003447345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oreochromis niloticus]
Length = 335
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L + F Q+G + + +MRD ++ RSRGFGF+T+ + + VDD + K
Sbjct: 19 GLSF-ETTEESL---RAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVREVDDAM-KA 73
Query: 84 NKLELAGAQVEVKKA 98
++ G VE K+A
Sbjct: 74 RPHKVDGRVVEPKRA 88
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ IM + ST + RGF F+TFD VD ++A+ + EV+K
Sbjct: 120 IREYFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKFHT-INFHNCEVRK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
>gi|344270293|ref|XP_003406980.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Loxodonta africana]
Length = 365
Score = 45.4 bits (106), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 49/109 (44%), Gaps = 20/109 (18%)
Query: 9 LTMFINRQTTTQKMTGLSLTPVT-------------------EPALDEFKDFFMQFGDVQ 49
+ +F+N + Q L P+ E + ++++ Q+G +
Sbjct: 1 MRIFMNDKPKVQSKKTLETVPLERKKREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLT 60
Query: 50 EHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA 98
+ +MRD ++ RSRGFGF+TF + VD +A + G VE K+A
Sbjct: 61 DCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGRVVEPKRA 108
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 140 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 198
Query: 98 A 98
A
Sbjct: 199 A 199
>gi|213625123|gb|AAI69881.1| Unknown (protein for MGC:196608) [Xenopus laevis]
Length = 348
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F Q+G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 37 ETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDASMSARPHKVD--G 94
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 95 RVVEPKRA 102
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA-KGNKLELAGAQVEVK 96
+D+F +G ++ ++M D + + RGF F+TFD VD ++ K + + L EVK
Sbjct: 134 LRDYFEGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHTINLHNC--EVK 191
Query: 97 KAEPKK 102
KA K+
Sbjct: 192 KALSKQ 197
>gi|432933127|ref|XP_004081818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oryzias latipes]
Length = 340
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ IM + ST + RGF F+TFD VD ++A+ + + EV+K
Sbjct: 120 IREYFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHI-INFHNCEVRK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L + F Q+G + + +MRD ++ RSRGFGF+T+ VDD + K
Sbjct: 19 GLSF-ETTEESL---RAHFEQWGSLTDCVVMRDPNSKRSRGFGFVTYSNVTEVDDAM-KA 73
Query: 84 NKLELAGAQVEVKKA 98
++ G VE K+A
Sbjct: 74 RPHKVDGRVVEPKRA 88
>gi|27527723|emb|CAC86462.1| glycin-rich RNA binding protein [Polytomella sp. Pringsheim 198.80]
Length = 177
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 49/96 (51%), Gaps = 14/96 (14%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + +F +FG+V+E I D + RSRGFGF+T + A D + K N E G ++V
Sbjct: 17 EDLRTYFGKFGEVEEASIALDRESGRSRGFGFVTLPADVA-KDAIEKTNGAEFMGRNIKV 75
Query: 96 KKAEPKKPNLPQPSYRRYNNPKPAYGSGFGDAYGGY 131
+A P P R NN YG G+GD +
Sbjct: 76 NEASPPGERPP-----RTNN----YGGGYGD----F 98
>gi|47086749|ref|NP_997810.1| heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
gi|44890516|gb|AAH66672.1| Zgc:77366 [Danio rerio]
Length = 305
Score = 45.4 bits (106), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D +D F QFG V++ +++ D T + RGFGF+ F+ + D + + + G +VEV
Sbjct: 115 DHLRDCFSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHM-INGHKVEV 173
Query: 96 KKAEPKK 102
KKA K+
Sbjct: 174 KKALTKQ 180
>gi|417410136|gb|JAA51545.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 368
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 46 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 104
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 105 VVEPKRA 111
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 143 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 201
Query: 98 A 98
A
Sbjct: 202 A 202
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 206 LRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 264
Query: 98 A 98
A
Sbjct: 265 A 265
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 113 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 170
Query: 95 VKKA 98
K+A
Sbjct: 171 PKRA 174
>gi|324505861|gb|ADY42513.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 357
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K+F+ ++G++ + +M+D +T RSRGFGF+++ + VD+ +A + + G V+ K+
Sbjct: 38 LKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHI-VDGKTVDPKR 96
Query: 98 AEPK 101
A P+
Sbjct: 97 AVPR 100
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELA 89
TE L+E +F +FG V + +I+ D +T + RGF FITFD VD +L K + +++
Sbjct: 125 TEQMLEE---YFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSH--QIS 179
Query: 90 GAQVEVKKA 98
+ +VKKA
Sbjct: 180 NFRCDVKKA 188
>gi|324504581|gb|ADY41977.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 345
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K+F+ ++G++ + +M+D +T RSRGFGF+++ + VD+ +A + + G V+ K+
Sbjct: 38 LKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHI-VDGKTVDPKR 96
Query: 98 AEPK 101
A P+
Sbjct: 97 AVPR 100
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELA 89
TE L+E +F +FG V + +I+ D +T + RGF FITFD VD +L K + +++
Sbjct: 125 TEQMLEE---YFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSH--QIS 179
Query: 90 GAQVEVKKA 98
+ +VKKA
Sbjct: 180 NFRCDVKKA 188
>gi|209154454|gb|ACI33459.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 206
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 3/67 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E +L+E F ++G++ + ++RD T RSRGFGF+TF+ + D +A N + G
Sbjct: 18 ETSLEEA---FSKYGNIAKVDVVRDRETQRSRGFGFVTFENPEDAKDAMAAMNGKSVDGR 74
Query: 92 QVEVKKA 98
+ V +A
Sbjct: 75 MIRVDEA 81
>gi|37610|emb|CAA27874.1| unnamed protein product [Homo sapiens]
Length = 196
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+KA K
Sbjct: 1 FEQYGKIEVIEIMTDPGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRKALSK 59
Query: 102 K 102
+
Sbjct: 60 Q 60
>gi|444513904|gb|ELV10489.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Tupaia
chinensis]
Length = 432
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 116 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 174
Query: 98 AEPKK 102
A K+
Sbjct: 175 ALSKQ 179
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 19 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 76
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 77 RVVEPKRA 84
>gi|156061483|ref|XP_001596664.1| glycine-rich RNA-binding protein [Sclerotinia sclerotiorum 1980]
gi|154700288|gb|EDO00027.1| glycine-rich RNA-binding protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 193
Score = 45.4 bits (106), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 41/79 (51%), Gaps = 14/79 (17%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF----------DTEQAVDDLLAKGNK 85
D + F +FG+V+E +++D T RSRGFGF+ F D E+A+ ++ N
Sbjct: 16 DALRKKFSEFGNVEEAVVVKDRDTGRSRGFGFVRFGQGSDSSPEADAEKAIQEM----NS 71
Query: 86 LELAGAQVEVKKAEPKKPN 104
+E G + V KA + N
Sbjct: 72 VEFDGRTIRVDKASERSGN 90
>gi|296190480|ref|XP_002743214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
isoform 2 [Callithrix jacchus]
Length = 320
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD ++D ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|410036043|ref|XP_003949991.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan troglodytes]
Length = 320
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G + +IM D + + RGF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFEQYGKTEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 37.0 bits (84), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q G + + +MRD +T S GFGF+T+ T + V+ + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQRGTLTDCVVMRDPNTKCSTGFGFVTYATVKEVEAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|241710586|ref|XP_002412054.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215505115|gb|EEC14609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 275
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ +D+F QFG++ ++ + T R RGF F+ +D VD ++ K + + L G + EVK
Sbjct: 86 DLRDYFAQFGNILSVNLVTEKETGRKRGFAFVEYDDYDPVDKIVLKRHHM-LKGKRTEVK 144
Query: 97 KA 98
KA
Sbjct: 145 KA 146
>gi|149639709|ref|XP_001515278.1| PREDICTED: hypothetical protein LOC100084860 [Ornithorhynchus
anatinus]
Length = 327
Score = 45.4 bits (106), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLE 87
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++
Sbjct: 49 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD 101
>gi|390457874|ref|XP_003732018.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMMDRGSGKKRGFAFVTFDNHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%), Gaps = 8/72 (11%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + +MRD +T RSRGFGF+T+ T + VD + A+ +K
Sbjct: 24 ETTDESLRSHFEQWGTLTYCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHK----- 78
Query: 91 AQVEVKKAEPKK 102
V+ + EPK+
Sbjct: 79 --VDRRVVEPKR 88
>gi|296194380|ref|XP_002744925.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein
A1-like 3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 45.4 bits (106), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + R F F+TFD VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVTEIMTDRGSGKKRSFAFVTFDDHDTVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|348564390|ref|XP_003467988.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cavia porcellus]
Length = 383
Score = 45.1 bits (105), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 61 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 119
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 120 VVEPKRA 126
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 158 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 216
Query: 98 A 98
A
Sbjct: 217 A 217
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 19 ETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA-ARPHTIDGR 77
Query: 92 QVEVKKA----EPKKP 103
VE K+A E KP
Sbjct: 78 VVEPKRAVAREESAKP 93
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 AEPKK 102
A K+
Sbjct: 175 ALSKQ 179
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 19 ETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA-ARPHTIDGR 77
Query: 92 QVEVKKA----EPKKP 103
VE K+A E KP
Sbjct: 78 VVEPKRAVAREESAKP 93
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 AEPKK 102
A K+
Sbjct: 175 ALSKQ 179
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Anolis carolinensis]
Length = 354
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + ++ F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|74209393|dbj|BAE23274.1| unnamed protein product [Mus musculus]
Length = 301
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQEYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 19 ETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA-ARPHTIDGR 77
Query: 92 QVEVKKA----EPKKP 103
VE K+A E KP
Sbjct: 78 VVEPKRAVAREESAKP 93
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 AEPKK 102
A K+
Sbjct: 175 ALSKQ 179
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 19 ETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVDASMA-ARPHTIDGR 77
Query: 92 QVEVKKA----EPKKP 103
VE K+A E KP
Sbjct: 78 VVEPKRAVAREESAKP 93
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LREYFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 AEPKK 102
A K+
Sbjct: 175 ALSKQ 179
>gi|296207810|ref|XP_002750803.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 319
Score = 45.1 bits (105), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TF+ +VD ++ + + G EV+K
Sbjct: 120 LRDYFEQYGQIEVIEIMTDRGSGKKRGFTFVTFNDHDSVDKIVIQKYHT-VNGHNCEVRK 178
Query: 98 AEPKK 102
A K+
Sbjct: 179 ALSKQ 183
>gi|324528875|gb|ADY48960.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris
suum]
Length = 220
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
FKD F ++G++ + +I+ D +T + RGF F+TFD AVD + + + + A+ +VKK
Sbjct: 2 FKDHFGKYGNIIKCEIIADKATGKPRGFAFVTFDDYDAVDKCILIKSHM-INNARCDVKK 60
Query: 98 A 98
A
Sbjct: 61 A 61
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saimiri boliviensis boliviensis]
Length = 320
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD ++D ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|332663699|ref|YP_004446487.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
gi|332332513|gb|AEE49614.1| RNP-1 like RNA-binding protein [Haliscomenobacter hydrossis DSM
1100]
Length = 208
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF---DTEQAVDDLLAKGNKLELAGAQV 93
+ ++ F FG+V +++ DH T +SRGFGF+ D QA D L N+ + G +
Sbjct: 16 DLREAFEAFGEVDSAKVIMDHDTGKSRGFGFVEMPNDDEAQAAIDAL---NETDFDGNTI 72
Query: 94 EVKKAEPKK 102
KKAEP++
Sbjct: 73 VCKKAEPRE 81
>gi|291393060|ref|XP_002713026.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 45.1 bits (105), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSR FGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVEEVDVAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ QIM D + + +GF +TFD ++D ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|402867876|ref|XP_003898055.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T VD + A+ +K++ G
Sbjct: 24 ETTDETLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVGEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|32880197|ref|NP_872591.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2 [Mus
musculus]
gi|26354140|dbj|BAC40700.1| unnamed protein product [Mus musculus]
gi|223461557|gb|AAI41254.1| Hnrnpa2b1 protein [Mus musculus]
Length = 301
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|344238619|gb|EGV94722.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Cricetulus griseus]
Length = 282
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 57 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 115
Query: 98 A 98
A
Sbjct: 116 A 116
>gi|410036104|ref|XP_525973.4| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Pan
troglodytes]
Length = 371
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAGAQVE 94
D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G VE
Sbjct: 76 DSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--GRVVE 133
Query: 95 VKKA 98
K+A
Sbjct: 134 PKRA 137
>gi|356519124|ref|XP_003528224.1| PREDICTED: uncharacterized protein LOC100801928 [Glycine max]
Length = 656
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 49/114 (42%), Gaps = 25/114 (21%)
Query: 13 INRQTTTQKMTGL---SLTPVTEP-------------------ALD--EFKDFFMQFGDV 48
I RQ T QK+ GL SL+ V + ++D + Q+G V
Sbjct: 10 ILRQATNQKI-GLEIRSLSSVFQATRCMSNAPNSRLFIGGVSYSIDAQSLGEICSQYGQV 68
Query: 49 QEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
+ +I+ D T R RGFGFIT+ L + +L G +VEVK A +
Sbjct: 69 VDARIIMDRETGRHRGFGFITYSNVDEASRALQALDGQDLDGRRVEVKFAIERS 122
>gi|3329498|gb|AAC26867.1| heterogenous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|157059863|dbj|BAF79677.1| heterogeneous nuclear ribonucleoprotein B0a [Rattus norvegicus]
Length = 301
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
>gi|440899276|gb|ELR50605.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 339
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 13 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 67
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 68 RPHSIDGRVVEPKRA 82
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 114 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 172
Query: 98 A 98
A
Sbjct: 173 A 173
>gi|410058693|ref|XP_003951016.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Pan
troglodytes]
gi|119614240|gb|EAW93834.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_a
[Homo sapiens]
Length = 301
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
>gi|392339470|ref|XP_003753820.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Rattus norvegicus]
Length = 341
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSFE-TTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDVAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGXKRGFGFVTFDDHDPVDKIVLQKYHTK-NGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|119614244|gb|EAW93838.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614246|gb|EAW93840.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614247|gb|EAW93841.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
Length = 301
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 76 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 134
Query: 98 A 98
A
Sbjct: 135 A 135
>gi|402894543|ref|XP_003910414.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402894545|ref|XP_003910415.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFDQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+ + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYTTVEEVDAAINARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|355694908|gb|AER99825.1| heteroproteinous nuclear ribonucleoprotein A0 [Mustela putorius
furo]
Length = 295
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|324510912|gb|ADY44557.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 323
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K+F+ ++G++ + +M+D +T RSRGFGF+++ + VD+ +A + + G V+ K+
Sbjct: 38 LKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHI-VDGKTVDPKR 96
Query: 98 AEPK 101
A P+
Sbjct: 97 AVPR 100
Score = 40.4 bits (93), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELA 89
TE L+E +F +FG V + +I+ D +T + RGF FITFD VD +L K + +++
Sbjct: 125 TEQMLEE---YFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSH--QIS 179
Query: 90 GAQVEVKKA 98
+ +VKKA
Sbjct: 180 NFRCDVKKA 188
>gi|313240275|emb|CBY32620.1| unnamed protein product [Oikopleura dioica]
Length = 331
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS + TE + +F FG +++ + D T +SRGFGFI F+ +VD ++A
Sbjct: 62 GLSRSTTTE----SLRTYFESFGALRDASVKIDTMTQQSRGFGFILFEDAASVDAVMATP 117
Query: 84 NKLELAGAQVEVKKAE 99
+ L G +++ KKAE
Sbjct: 118 EHI-LDGKKIDPKKAE 132
>gi|71896753|ref|NP_001026156.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Gallus gallus]
gi|53127438|emb|CAG31102.1| hypothetical protein RCJMB04_2g17 [Gallus gallus]
Length = 349
Score = 45.1 bits (105), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 23 GLSFE-TTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 77
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 78 RPHTIDGRVVEPKRA 92
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 124 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 182
Query: 98 A 98
A
Sbjct: 183 A 183
>gi|149709520|ref|XP_001501077.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Equus caballus]
Length = 320
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFLTFDDHDSVDKSVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 53 IMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKAEPKKPNLPQPSYR 111
+MRD +T SRGFGF+T+ T + VD + A+ +K V+ + EPK+ L + S R
Sbjct: 45 VMRDPNTKCSRGFGFVTYATVEEVDAAMNARPHK-------VDGRVVEPKRAVLREDSQR 97
>gi|75074832|sp|Q9TTV2.1|ROA2_SAGOE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1; AltName: Full=Vitamin D response
element-binding protein 2; Short=VDRE-BP 2
gi|6273351|gb|AAF06330.1|AF192348_1 vitamin D response element binding protein [Saguinus oedipus]
Length = 341
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSFQ-TTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
Score = 44.7 bits (104), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|109098438|ref|XP_001091114.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
gi|109098440|ref|XP_001091244.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 4 [Macaca mulatta]
gi|297263360|ref|XP_002798798.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 320
Score = 45.1 bits (105), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKTVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 40.4 bits (93), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 3/75 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLE--L 88
E + + F Q+G + + MRD +T RSRGF F+T+ T + VD + A+ +K++ +
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVAMRDPNTKRSRGFRFVTYATVEEVDAAMNARPHKVDGRV 83
Query: 89 AGAQVEVKKAEPKKP 103
+ V + + ++P
Sbjct: 84 VEPKTAVSREDSQRP 98
>gi|390474591|ref|XP_002757923.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Callithrix jacchus]
Length = 339
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + R F F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + V D + G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV-DAAVNARPHNVDGR 82
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 83 VVEPKRA 89
>gi|157059859|dbj|BAF79675.1| heterogeneous nuclear ribonucleoprotein A2 [Rattus norvegicus]
Length = 341
Score = 44.7 bits (104), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD + + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|4504447|ref|NP_002128.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Homo
sapiens]
gi|114051756|ref|NP_001039440.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|73976082|ref|XP_863847.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
3 [Canis lupus familiaris]
gi|332242620|ref|XP_003270483.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Nomascus leucogenys]
gi|332864909|ref|XP_003318407.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Pan troglodytes]
gi|338724111|ref|XP_003364873.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Equus caballus]
gi|350595419|ref|XP_003484106.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Sus scrofa]
gi|390466619|ref|XP_003733620.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Callithrix jacchus]
gi|397472888|ref|XP_003807964.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Pan paniscus]
gi|402863875|ref|XP_003896219.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Papio anubis]
gi|403287969|ref|XP_003935191.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Saimiri boliviensis boliviensis]
gi|410952506|ref|XP_003982920.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Felis catus]
gi|426355697|ref|XP_004045246.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Gorilla gorilla gorilla]
gi|122145945|sp|Q2HJ60.1|ROA2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337449|gb|AAA36574.1| hnRNP A2 protein [Homo sapiens]
gi|500638|gb|AAB60650.1| hnRNP protein A2 [Homo sapiens]
gi|565644|dbj|BAA06032.1| hnRNP A2 protein [Homo sapiens]
gi|87578315|gb|AAI13299.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Bos taurus]
gi|119614241|gb|EAW93835.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b
[Homo sapiens]
gi|119614242|gb|EAW93836.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b
[Homo sapiens]
gi|149033380|gb|EDL88181.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|149033381|gb|EDL88182.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|296488431|tpg|DAA30544.1| TPA: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|387542842|gb|AFJ72048.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Macaca
mulatta]
gi|410225452|gb|JAA09945.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343561|gb|JAA40594.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343565|gb|JAA40596.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343567|gb|JAA40597.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343569|gb|JAA40598.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|456753293|gb|JAA74140.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Sus scrofa]
Length = 341
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|109134362|ref|NP_058086.2| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1 [Mus
musculus]
gi|309267107|ref|XP_001473875.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Mus musculus]
gi|21071091|gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
gi|148666222|gb|EDK98638.1| mCG119114, isoform CRA_b [Mus musculus]
gi|148666223|gb|EDK98639.1| mCG119114, isoform CRA_b [Mus musculus]
Length = 341
Score = 44.7 bits (104), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|296196619|ref|XP_002745917.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Callithrix jacchus]
Length = 341
Score = 44.7 bits (104), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
>gi|71895177|ref|NP_001026424.1| heterogeneous nuclear ribonucleoprotein A1 [Gallus gallus]
gi|53130302|emb|CAG31480.1| hypothetical protein RCJMB04_6o1 [Gallus gallus]
Length = 368
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ + + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|148233568|ref|NP_001079471.1| heterogeneous nuclear ribonucleoprotein A2 homolog 2 [Xenopus
laevis]
gi|1710624|sp|P51990.1|RO22_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 2;
AltName: Full=hnRNP A2(B)
gi|214743|gb|AAB59951.1| ribonucleoprotein [Xenopus laevis]
gi|27694622|gb|AAH43750.1| MGC52881 protein [Xenopus laevis]
Length = 358
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++F+ Q+G + + +MRD ++ RSRGFGF+TF VD ++
Sbjct: 15 GLSF-ETTEESL---RNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS-A 69
Query: 84 NKLELAGAQVEVKKA----EPKKP 103
+ G VE K+A E KP
Sbjct: 70 RPHTIDGRVVEPKRAVAREESAKP 93
>gi|58331869|ref|NP_001011094.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
gi|54038494|gb|AAH84487.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + ++ F Q+G + + +MRD ++ RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 21 ETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSTDEVDAAMSARPHKVD--G 78
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 79 RVVEPKRA 86
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F Q+G ++ +IM D + + RGF F+TF+ +VD ++ + + EV+K
Sbjct: 118 LREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHT-VNNHNCEVRK 176
Query: 98 AEPKK 102
A K+
Sbjct: 177 ALSKQ 181
>gi|327274637|ref|XP_003222083.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Anolis carolinensis]
Length = 349
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 23 GLSFE-TTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDSAMA-A 77
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 78 RPHSIDGRVVEPKRA 92
>gi|354472764|ref|XP_003498607.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cricetulus griseus]
Length = 357
Score = 44.7 bits (104), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 35 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 93
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 94 VVEPKRA 100
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 132 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 190
Query: 98 A 98
A
Sbjct: 191 A 191
>gi|76780030|gb|AAI06633.1| MGC52881 protein [Xenopus laevis]
Length = 346
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++F+ Q+G + + +MRD ++ RSRGFGF+TF VD ++
Sbjct: 15 GLSF-ETTEESL---RNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMS-A 69
Query: 84 NKLELAGAQVEVKKA----EPKKP 103
+ G VE K+A E KP
Sbjct: 70 RPHTIDGRVVEPKRAVAREESAKP 93
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ +I+ D + + RGFGF+TF+ VD ++ + + G EV+K
Sbjct: 116 LREYFEEYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 AEPKK 102
A K+
Sbjct: 175 ALSKQ 179
>gi|324520993|gb|ADY47759.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 339
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 42/64 (65%), Gaps = 1/64 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K+F+ ++G++ + +M+D +T RSRGFGF+++ + VD+ +A + + G V+ K+
Sbjct: 32 LKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHI-VDGKTVDPKR 90
Query: 98 AEPK 101
A P+
Sbjct: 91 AVPR 94
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELA 89
TE L+E +F +FG V + +I+ D +T + RGF FITFD VD +L K + +++
Sbjct: 119 TEQMLEE---YFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSH--QIS 173
Query: 90 GAQVEVKKA 98
+ +VKKA
Sbjct: 174 NFRCDVKKA 182
>gi|345323589|ref|XP_003430726.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 302
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD ++
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
>gi|402872594|ref|XP_003900193.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Papio
anubis]
Length = 303
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|332234557|ref|XP_003266473.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Nomascus
leucogenys]
Length = 306
Score = 44.7 bits (104), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|47550715|ref|NP_999871.1| heterogeneous nuclear ribonucleoprotein A0b [Danio rerio]
gi|42542945|gb|AAH66434.1| Heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
Length = 314
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ +FF QFG +++ +++ D T + RGFGF+ F+ + D + + + G +VEVK
Sbjct: 114 DLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHM-INGHKVEVK 172
Query: 97 KAEPKKP 103
KA K+
Sbjct: 173 KALTKQE 179
Score = 40.8 bits (94), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+ +F QFG++ + ++++ RSR FGF+T+ T + D +A + + G VEVK+
Sbjct: 24 LRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEADAAMAARPHV-VDGKNVEVKR 82
Query: 98 A 98
A
Sbjct: 83 A 83
>gi|390474589|ref|XP_002757922.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Callithrix jacchus]
Length = 320
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + R F F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + V D + G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEV-DAAVNARPHNVDGR 82
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 83 VVEPKRA 89
>gi|392354145|ref|XP_003751688.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Rattus
norvegicus]
Length = 307
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F + A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|326921905|ref|XP_003207194.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Meleagris gallopavo]
Length = 362
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 40 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHTIDGR 98
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 99 VVEPKRA 105
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 137 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 195
Query: 98 A 98
A
Sbjct: 196 A 196
>gi|157059865|dbj|BAF79678.1| heterogeneous nuclear ribonucleoprotein B0b [Rattus norvegicus]
Length = 313
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 31 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 89
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 90 VVEPKRA 96
>gi|351704285|gb|EHB07204.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial
[Heterocephalus glaber]
gi|355560744|gb|EHH17430.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
mulatta]
gi|355747762|gb|EHH52259.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
fascicularis]
Length = 352
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 30 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 88
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 89 VVEPKRA 95
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 127 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 185
Query: 98 A 98
A
Sbjct: 186 A 186
>gi|219519440|gb|AAI45589.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDGAMA-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
>gi|444725237|gb|ELW65811.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 272
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 37/74 (50%), Gaps = 1/74 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+ FD VD + + + G EV+K
Sbjct: 30 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVPFDDHDPVDKTVLQKYHT-INGHNAEVRK 88
Query: 98 AEPKKPNLPQPSYR 111
A ++ S R
Sbjct: 89 ALSRQEMQEVQSSR 102
>gi|392333807|ref|XP_003753001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0, partial
[Rattus norvegicus]
Length = 226
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 40 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEVKKA 98
+ F QFG V++ +I+ D + + RGFGF+ F + A D + K + ++ G +VEVKKA
Sbjct: 35 EHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQ--GHRVEVKKA 92
Query: 99 EPKK 102
PK+
Sbjct: 93 VPKE 96
>gi|449268325|gb|EMC79194.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Columba
livia]
Length = 339
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 114 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 172
Query: 98 A 98
A
Sbjct: 173 A 173
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L + ++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A
Sbjct: 13 GLSF-ETTEESL---RSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-A 67
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 68 RPHTIDGRVVEPKRA 82
>gi|14043072|ref|NP_112533.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Homo
sapiens]
gi|388452958|ref|NP_001252700.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Macaca mulatta]
gi|73976084|ref|XP_532495.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Canis lupus familiaris]
gi|194209740|ref|XP_001498416.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Equus caballus]
gi|296209404|ref|XP_002751505.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Callithrix jacchus]
gi|301754131|ref|XP_002912905.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ailuropoda melanoleuca]
gi|332242622|ref|XP_003270484.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Nomascus leucogenys]
gi|332864911|ref|XP_519003.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Pan troglodytes]
gi|335305558|ref|XP_003134901.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
1 [Sus scrofa]
gi|395830927|ref|XP_003788564.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Otolemur garnettii]
gi|397472890|ref|XP_003807965.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Pan paniscus]
gi|402863877|ref|XP_003896220.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Papio anubis]
gi|403287971|ref|XP_003935192.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Saimiri boliviensis boliviensis]
gi|410952508|ref|XP_003982921.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Felis catus]
gi|426227786|ref|XP_004007996.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Ovis
aries]
gi|426355699|ref|XP_004045247.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform
2 [Gorilla gorilla gorilla]
gi|133257|sp|P22626.2|ROA2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337453|gb|AAA60271.1| hnRNP B1 protein [Homo sapiens]
gi|565643|dbj|BAA06031.1| hnRNP B1 protein [Homo sapiens]
gi|119614243|gb|EAW93837.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c
[Homo sapiens]
gi|119614245|gb|EAW93839.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c
[Homo sapiens]
gi|387542844|gb|AFJ72049.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Macaca
mulatta]
gi|410225454|gb|JAA09946.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343563|gb|JAA40595.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
Length = 353
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 31 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 89
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 90 VVEPKRA 96
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 186
Query: 98 A 98
A
Sbjct: 187 A 187
>gi|332826110|ref|XP_003311764.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan troglodytes]
Length = 283
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV K
Sbjct: 84 LRDYFEQYGKIEVIEIMSDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVTK 142
Query: 98 AEPKK 102
A K+
Sbjct: 143 ALSKQ 147
>gi|124028629|sp|O88569.2|ROA2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|23266713|gb|AAN16352.1|AF452567_1 heterogeneous nuclear ribonucleoprotein A2/B1/B0 [Mus musculus]
Length = 353
Score = 44.3 bits (103), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 31 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 89
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 90 VVEPKRA 96
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 186
Query: 98 A 98
A
Sbjct: 187 A 187
>gi|440714448|ref|ZP_20895027.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
gi|436440644|gb|ELP33948.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula baltica SWK14]
Length = 196
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+E + F Q+G+V I+ D T RSRGF F+ + D + N E+ G V V
Sbjct: 69 EELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTV 128
Query: 96 KKAEPKKP 103
+A P++P
Sbjct: 129 NEARPREP 136
>gi|417304381|ref|ZP_12091404.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|449136828|ref|ZP_21772190.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
gi|327539333|gb|EGF25954.1| protein containing RNA recognition motif, RNP-1 domains
[Rhodopirellula baltica WH47]
gi|448884533|gb|EMB15023.1| protein containing RNA recognition motif, RNP-1 domain protein
[Rhodopirellula europaea 6C]
Length = 195
Score = 44.3 bits (103), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+E + F Q+G+V I+ D T RSRGF F+ + D + N E+ G V V
Sbjct: 69 EELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTV 128
Query: 96 KKAEPKKP 103
+A P++P
Sbjct: 129 NEARPREP 136
>gi|334349111|ref|XP_001368260.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Monodelphis domestica]
Length = 341
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD ++
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
>gi|149634029|ref|XP_001510026.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Ornithorhynchus anatinus]
gi|345323587|ref|XP_003430725.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 344
Score = 44.3 bits (103), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 116 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 174
Query: 98 A 98
A
Sbjct: 175 A 175
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD ++
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS-A 69
Query: 84 NKLELAGAQVEVKKA 98
+ G VE K+A
Sbjct: 70 RPHSIDGRVVEPKRA 84
>gi|157265559|ref|NP_001098083.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Rattus
norvegicus]
gi|224493240|sp|A7VJC2.1|ROA2_RAT RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|157059861|dbj|BAF79676.1| heterogeneous nuclear ribonucleoprotein B1 [Rattus norvegicus]
Length = 353
Score = 44.3 bits (103), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 31 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 89
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 90 VVEPKRA 96
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD + + + G EV+K
Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIFLQKYHT-INGHNAEVRK 186
Query: 98 A 98
A
Sbjct: 187 A 187
>gi|347967733|ref|XP_563821.4| AGAP002374-PA [Anopheles gambiae str. PEST]
gi|333468325|gb|EAL40938.4| AGAP002374-PA [Anopheles gambiae str. PEST]
Length = 362
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D K +F ++G V + +M+D T RSRGFGFIT+ +DD A ++ G VE
Sbjct: 43 DTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKSYMIDDAQA-SRPHKIDGRVVEP 101
Query: 96 KKAEPKKP-NLPQ 107
K+A P++ N P+
Sbjct: 102 KRAVPRQDINRPE 114
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 7/80 (8%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ +++F ++G+V I+ D + RGFGF+ FD VD ++ + + + ++V
Sbjct: 134 EHLREYFSKYGNVISACIVTDKDNGKKRGFGFVEFDDYDPVDKIILQKSHT-IQNKLLDV 192
Query: 96 KKAEPKKPNLPQPSYRRYNN 115
KKA LP+ RY N
Sbjct: 193 KKA------LPKQDMDRYKN 206
>gi|118097545|ref|XP_414620.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Gallus
gallus]
Length = 307
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 38/62 (61%), Gaps = 3/62 (4%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEVKKAEP 100
F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEVKKA P
Sbjct: 118 FSQFGPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEVKKAVP 175
Query: 101 KK 102
K+
Sbjct: 176 KE 177
>gi|114601869|ref|XP_001169959.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pan
troglodytes]
gi|397518219|ref|XP_003829292.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pan
paniscus]
gi|410211572|gb|JAA03005.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410249756|gb|JAA12845.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410295930|gb|JAA26565.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410346956|gb|JAA40716.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
Length = 306
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|388453863|ref|NP_001253568.1| heterogeneous nuclear ribonucleoprotein A0 [Macaca mulatta]
gi|384944966|gb|AFI36088.1| heterogeneous nuclear ribonucleoprotein A0 [Macaca mulatta]
Length = 303
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|5803036|ref|NP_006796.1| heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|297676052|ref|XP_002815964.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pongo
abelii]
gi|8134660|sp|Q13151.1|ROA0_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A0;
Short=hnRNP A0
gi|773644|gb|AAA65094.1| heterogeneous ribonucleoprotein A0 [Homo sapiens]
gi|12654371|gb|AAH01008.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|13938287|gb|AAH07271.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|14424524|gb|AAH09284.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|15080451|gb|AAH11972.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|15278047|gb|AAH12980.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|17511973|gb|AAH18949.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|17939453|gb|AAH19271.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|20810403|gb|AAH28976.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|20987729|gb|AAH30249.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|48146089|emb|CAG33267.1| HNRPA0 [Homo sapiens]
gi|119582586|gb|EAW62182.1| heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|261861132|dbj|BAI47088.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
Length = 305
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|357473273|ref|XP_003606921.1| Glycine-rich RNA binding protein [Medicago truncatula]
gi|355507976|gb|AES89118.1| Glycine-rich RNA binding protein [Medicago truncatula]
Length = 164
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F Q+G++ + +I+ D T RSRGFGF+TF E+++ D + N ++ G + V +A+
Sbjct: 28 FSQYGEIIDSKIINDRETGRSRGFGFVTFADEKSMRDAIEGMNGQDMDGRNITVNEAQS 86
>gi|226443091|ref|NP_084148.1| heterogeneous nuclear ribonucleoprotein A0 [Mus musculus]
gi|81916834|sp|Q9CX86.1|ROA0_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A0;
Short=hnRNP A0
gi|12859567|dbj|BAB31694.1| unnamed protein product [Mus musculus]
Length = 305
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F + A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|158259881|dbj|BAF82118.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 44.3 bits (103), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 31 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 89
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 90 VVEPKRA 96
Score = 43.9 bits (102), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 186
Query: 98 A 98
A
Sbjct: 187 A 187
>gi|32879847|gb|AAP88754.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
gi|60653987|gb|AAX29686.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
Length = 306
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|291394569|ref|XP_002713772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
gi|291397610|ref|XP_002715276.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
Length = 352
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 31 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 89
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 90 VVEPKRA 96
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 186
Query: 98 A 98
A
Sbjct: 187 A 187
>gi|214241|gb|AAA49742.1| ribonucleoprotein A1b [Xenopus laevis]
Length = 351
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E + ++ F Q+G + + +MRD ++ RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 24 ETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 82
D +++F Q+G ++ +IM D + + RGF F+TF+ +VD ++ +
Sbjct: 119 DHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQ 165
>gi|1911429|gb|AAB50657.1| A0=heterogeneous nuclear ribonucleoprotein [human, placenta,
Peptide, 305 aa]
Length = 305
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|32476441|ref|NP_869435.1| RNA-binding protein [Rhodopirellula baltica SH 1]
gi|32446986|emb|CAD78892.1| RNA-binding protein [Rhodopirellula baltica SH 1]
Length = 206
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+E + F Q+G+V I+ D T RSRGF F+ + D + N E+ G V V
Sbjct: 80 EELRGAFEQYGEVSAVNIIMDRETGRSRGFAFVEMADAEGAKDAIENLNGHEIDGRSVTV 139
Query: 96 KKAEPKKP 103
+A P++P
Sbjct: 140 NEARPREP 147
>gi|326487468|dbj|BAJ89718.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510625|dbj|BAJ87529.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326518508|dbj|BAJ88283.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326520529|dbj|BAK07523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326527353|dbj|BAK04618.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 161
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F ++GDV + +I+ D T RSRGFGF+TF +++A+ + N +L G + V +
Sbjct: 22 LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNE 81
Query: 98 AE 99
A+
Sbjct: 82 AQ 83
>gi|114145394|dbj|BAF30986.1| glycine-rich RNA-binding protein [Triticum aestivum]
Length = 163
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F ++GDV + +I+ D T RSRGFGF+TF +++A+ + N +L G + V +
Sbjct: 22 LQNAFSKYGDVIDSKIITDRETGRSRGFGFVTFASDEAMRQAIEAMNGQDLDGRNITVNE 81
Query: 98 AE 99
A+
Sbjct: 82 AQ 83
>gi|326509231|dbj|BAJ91532.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326510271|dbj|BAJ87352.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 252
Score = 44.3 bits (103), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 34/64 (53%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F +G++ + +I+ D T RSRGFGFIT+ E+ + + +L G + V
Sbjct: 47 LRDAFSHYGEIIDAKIIVDRDTGRSRGFGFITYAAEEQASSAIMALDGKDLHGRNLRVSA 106
Query: 98 AEPK 101
A +
Sbjct: 107 ATER 110
>gi|147900728|ref|NP_001081282.1| heterogeneous nuclear ribonucleoproteins A1 homolog [Xenopus
laevis]
gi|47938744|gb|AAH72090.1| LOC397751 protein [Xenopus laevis]
Length = 365
Score = 44.3 bits (103), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D +++F Q+G ++ +IM D + + RGF F+TF+ +VD ++ + + EV
Sbjct: 119 DHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQKYHT-VNNHNCEV 177
Query: 96 KKAEPKK 102
+KA K+
Sbjct: 178 RKALSKQ 184
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E + ++ F Q+G + + +MRD ++ RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 24 ETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|195113429|ref|XP_002001270.1| GI10692 [Drosophila mojavensis]
gi|193917864|gb|EDW16731.1| GI10692 [Drosophila mojavensis]
Length = 379
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 41 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 98
Query: 97 KAEPKK 102
+A P++
Sbjct: 99 RAVPRQ 104
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F +FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 132 LREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHT-IKNKTLDVKK 190
Query: 98 AEPKK 102
A K+
Sbjct: 191 AIAKQ 195
>gi|355691634|gb|EHH26819.1| hypothetical protein EGK_16888 [Macaca mulatta]
Length = 303
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|195036930|ref|XP_001989921.1| GH19058 [Drosophila grimshawi]
gi|193894117|gb|EDV92983.1| GH19058 [Drosophila grimshawi]
Length = 379
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 41 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 98
Query: 97 KAEPKK 102
+A P++
Sbjct: 99 RAVPRQ 104
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F +FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 132 LREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH-NIKNKTLDVKK 190
Query: 98 AEPKK 102
A K+
Sbjct: 191 AIAKQ 195
>gi|125536731|gb|EAY83219.1| hypothetical protein OsI_38428 [Oryza sativa Indica Group]
Length = 257
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F +G V E +I+ D T RSRGFGFIT+ + + + + +L G + V
Sbjct: 47 LRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNT 106
Query: 98 AEPK 101
A +
Sbjct: 107 ANER 110
>gi|426231021|ref|XP_004009550.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Ovis aries]
Length = 302
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|194901402|ref|XP_001980241.1| GG17033 [Drosophila erecta]
gi|190651944|gb|EDV49199.1| GG17033 [Drosophila erecta]
Length = 392
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 97
Query: 97 KAEPKK 102
+A P++
Sbjct: 98 RAVPRQ 103
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + N + ++VKK
Sbjct: 131 LREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKNHT-IKNKSLDVKK 189
Query: 98 AEPKK 102
A K+
Sbjct: 190 AIAKQ 194
>gi|431892627|gb|ELK03060.1| Heterogeneous nuclear ribonucleoprotein A0 [Pteropus alecto]
Length = 307
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|73970814|ref|XP_538645.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 isoform 1
[Canis lupus familiaris]
Length = 310
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|417409570|gb|JAA51284.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 309
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 118 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 175
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 176 KKAVPKE 182
>gi|344264962|ref|XP_003404558.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Loxodonta africana]
Length = 307
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|119895504|ref|XP_593096.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|297477251|ref|XP_002689241.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|296485329|tpg|DAA27444.1| TPA: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
Length = 305
Score = 44.3 bits (103), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|195390403|ref|XP_002053858.1| GJ23111 [Drosophila virilis]
gi|194151944|gb|EDW67378.1| GJ23111 [Drosophila virilis]
Length = 382
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 41 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 98
Query: 97 KAEPKK 102
+A P++
Sbjct: 99 RAVPRQ 104
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F +FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 132 LREYFKEFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH-NIKNKTLDVKK 190
Query: 98 AEPKK 102
A K+
Sbjct: 191 AIAKQ 195
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 118 LREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 176
Query: 98 AEPKK 102
A K+
Sbjct: 177 ALSKQ 181
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 21 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVD--G 78
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 79 RVVEPKRA 86
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 313
Score = 44.3 bits (103), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 24 ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|291387384|ref|XP_002710273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Oryctolagus
cuniculus]
Length = 298
Score = 43.9 bits (102), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|395849370|ref|XP_003797301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Otolemur garnettii]
Length = 316
Score = 43.9 bits (102), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 3/76 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQ-VEVK 96
+ +F Q+G ++ +IM D + + RGF F+TFD +VD+++ + K + EV+
Sbjct: 120 LRAYFEQYGKMEVIEIMTDQDSGKKRGFAFVTFDDHDSVDNIVIQ--KYDTVNCHNCEVR 177
Query: 97 KAEPKKPNLPQPSYRR 112
KA K+ S +R
Sbjct: 178 KALSKQEMASASSSQR 193
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 8/70 (11%)
Query: 44 QFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKAEPKK 102
Q+G + + +MRD +T RSRGF F+T+ T + VD + A+ +K V+ + EPK+
Sbjct: 35 QWGMLTDCVVMRDPNTKRSRGFRFVTYVTVEEVDAAVNARPHK-------VDGRVVEPKR 87
Query: 103 PNLPQPSYRR 112
+ S RR
Sbjct: 88 AVSREDSQRR 97
>gi|390331826|ref|XP_003723361.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Strongylocentrotus purpuratus]
Length = 330
Score = 43.9 bits (102), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL--AKGNKLELAGAQV 93
D K++F QFG++ + +++D ++ +S+GFGF+TF + + V+ ++ K N L V
Sbjct: 36 DNIKEYFGQFGEIVDCCVIKDPTSLKSKGFGFVTFASRKEVNKVMGARKENPHRLDNRAV 95
Query: 94 EVKKAEPKKPNLPQ-PSYRRY 113
+V++A + P+ PS++ +
Sbjct: 96 DVRRAMARDEKGPKNPSFKCF 116
>gi|403309130|ref|XP_003944981.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 385
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+ + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G
Sbjct: 88 ETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--G 145
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 146 RVVEPKRA 153
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD ++D ++ + + G EV+K
Sbjct: 186 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKIVIQKYHT-VNGHGCEVRK 244
Query: 98 AEPKK 102
A K+
Sbjct: 245 ALSKQ 249
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 140 LREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 198
Query: 98 AEPKK 102
A K+
Sbjct: 199 ALSKQ 203
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 43 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVD--G 100
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 101 RVVEPKRA 108
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 147 LREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 205
Query: 98 AEPKK 102
A K+
Sbjct: 206 ALSKQ 210
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 50 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVD--G 107
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 108 RVVEPKRA 115
>gi|307006509|gb|ADN23539.1| RNA-binding protein musashi subunit HRP1 [Hyalomma marginatum
rufipes]
Length = 208
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 40/65 (61%), Gaps = 1/65 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ K +F +FG V+ ++ D + ++ R F F+TF+ E +V +L+ + K ++ + ++K
Sbjct: 11 DIKAYFEKFGPVENVELPFDKARNQRRQFTFVTFEREDSV-ELVCREPKQKIGNKECDIK 69
Query: 97 KAEPK 101
KA PK
Sbjct: 70 KATPK 74
>gi|348575081|ref|XP_003473318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Cavia
porcellus]
Length = 301
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|441657453|ref|XP_004091180.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 379
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E D +++F ++G + + +MRD T RSRGFGF+ + VD + ++ G
Sbjct: 45 ETTDDSLREYFEKWGTLTDCVVMRDAQTKRSRGFGFVAYSCVTEVDAAMC-ARPCKVDGR 103
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 104 VVEPKRA 110
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G ++ ++M D + + RGF +TFD VD + + + G EVKK
Sbjct: 142 LRDYFEKYGKIETIEVMEDRQSGKKRGFASVTFDDHDTVDKTVVQKYHT-INGHNCEVKK 200
Query: 98 A 98
A
Sbjct: 201 A 201
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G ++ ++M D + + RGF F+TFD VD ++ + + G EVKK
Sbjct: 148 LREYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVVQKYHT-INGHNCEVKK 206
Query: 98 AEPKK 102
A K+
Sbjct: 207 ALSKQ 211
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 51 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMSARPHKVD--G 108
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 109 RVVEPKRA 116
>gi|260304980|ref|NP_001159443.1| predicted gene 5803 [Mus musculus]
gi|148676975|gb|EDL08922.1| mCG112810 [Mus musculus]
Length = 320
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
+ F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G VE K
Sbjct: 30 LRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--GKVVEPK 87
Query: 97 KA 98
+A
Sbjct: 88 RA 89
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + R F F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDTIVIQKYH-NVNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|395540406|ref|XP_003772146.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Sarcophilus harrisii]
Length = 385
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 141 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNTEVRK 199
Query: 98 A 98
A
Sbjct: 200 A 200
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD ++ + G
Sbjct: 44 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMS-ARPHSIDGR 102
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 103 VVEPKRA 109
>gi|148237229|ref|NP_001080689.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus laevis]
gi|28374304|gb|AAH45260.1| Hnrpa1 protein [Xenopus laevis]
Length = 399
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E + ++ F Q+G + + +MRD ++ RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 24 ETTDESLREHFEQWGALTDCVVMRDPNSKRSRGFGFVTYSSTDEVDAAMTARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|350580575|ref|XP_003480852.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 349
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 44/77 (57%), Gaps = 8/77 (10%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAG 90
TE +L ++++ Q+G + + ++RD S RSRGFGF+TF + VD +A + G
Sbjct: 33 TEKSL---RNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSVAEVDAAMA-ARPHSVDG 88
Query: 91 AQVEVKKA----EPKKP 103
V+ K+A E +KP
Sbjct: 89 KVVDPKRAVAREESEKP 105
Score = 42.0 bits (97), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 82
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ +
Sbjct: 128 LRDYFEKYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQ 172
>gi|198452965|ref|XP_002137573.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
gi|198132155|gb|EDY68131.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
Length = 401
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 41 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 98
Query: 97 KAEPKK 102
+A P++
Sbjct: 99 RAVPRQ 104
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 132 LREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTHT-IKNKSLDVKK 190
Query: 98 AEPKK 102
A K+
Sbjct: 191 AIAKQ 195
>gi|344255674|gb|EGW11778.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Cricetulus griseus]
Length = 340
Score = 43.5 bits (101), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+G ++ +IM D + + RGF F+TFD +VD ++ + + G EV+K
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
+ F Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G VE K
Sbjct: 30 LRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--GRVVEPK 87
Query: 97 KA 98
+A
Sbjct: 88 RA 89
>gi|198428311|ref|XP_002127222.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 359
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E AL E+ + F ++ +I D T+R +GF F+TFD VD L+AK E+ G
Sbjct: 115 ENALREYFNTFTGNARIESVEIPLDRETTRPKGFAFVTFDDFDVVDKLVAKRIH-EIGGF 173
Query: 92 QVEVKKAEPKK 102
+ EVKKA K+
Sbjct: 174 RCEVKKALSKQ 184
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 41 FFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA-- 98
+F ++G+V + ++RD+ RS+GFGF+TF+TE+ D + L ++VK+A
Sbjct: 32 YFSKYGNVTDCVVIRDNG--RSKGFGFVTFETEEEADACM-DDRPHTLDSRTIDVKRAVS 88
Query: 99 --EPKKP 103
E KP
Sbjct: 89 REESSKP 95
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E D ++ F ++G + + +MRD T RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 23 ETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVDAAMCARPHKVD--G 80
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 81 RVVEPKRA 88
>gi|195500856|ref|XP_002097553.1| GE24426 [Drosophila yakuba]
gi|194183654|gb|EDW97265.1| GE24426 [Drosophila yakuba]
Length = 391
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQDARPHKID--GRTVEPK 97
Query: 97 KAEPKK 102
+A P++
Sbjct: 98 RAVPRQ 103
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + N + ++VKK
Sbjct: 131 LREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKNHT-IKNKSLDVKK 189
Query: 98 AEPKK 102
A K+
Sbjct: 190 AIAKQ 194
>gi|343427629|emb|CBQ71155.1| related to glycine-rich RNA-binding protein [Sporisorium reilianum
SRZ2]
Length = 192
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D F +G + ++ +M+D T RSRGFGF+TF T+ D +A + EL G ++ V
Sbjct: 17 DSLAHAFSAYGQLTDYIVMKDRETGRSRGFGFVTFATQAEADAAIAALHDQELDGRRIRV 76
Query: 96 KKAEPK 101
A +
Sbjct: 77 NMANSR 82
>gi|347832409|emb|CCD48106.1| hypothetical protein [Botryotinia fuckeliana]
Length = 200
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 15/75 (20%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-----------DTEQAVDDLLAKGNKL 86
++ F +FG V+E +++D T RSRGFGF+ + D E+A+ ++ N +
Sbjct: 18 LREKFSEFGTVEEAVVVKDRDTGRSRGFGFVRYGQGNPDSSPEADAEKAIQEM----NSV 73
Query: 87 ELAGAQVEVKKAEPK 101
E G + V KA +
Sbjct: 74 EFDGRTIRVDKASER 88
>gi|223647416|gb|ACN10466.1| Cold-inducible RNA-binding protein [Salmo salar]
Length = 193
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L E F ++G++ + ++RD T RSRGFGF+ +D + D L
Sbjct: 11 GLSF-DTTEESLAEA---FAKYGNIAKVDVIRDKETGRSRGFGFVKYDNAEDAKDALEGM 66
Query: 84 NKLELAGAQVEVKKA 98
N + G + V +A
Sbjct: 67 NGKSVDGRTIRVDEA 81
>gi|109111364|ref|XP_001106881.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
Length = 320
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q G ++ +IM D + + +GF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFEQRGKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKTIIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 APSKQ 184
>gi|409080475|gb|EKM80835.1| hypothetical protein AGABI1DRAFT_112564 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426197375|gb|EKV47302.1| hypothetical protein AGABI2DRAFT_192533 [Agaricus bisporus var.
bisporus H97]
Length = 168
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 36 DE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVE 94
DE + F FG V + +MRD T RSRGFGF+TF D + N+ EL G +++
Sbjct: 40 DETLRQAFSDFGQVLDSIVMRDRDTGRSRGFGFVTFSNSGEADAAINGLNEQELDGRRIK 99
Query: 95 VKKAEPK 101
V A +
Sbjct: 100 VNMANAR 106
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ +++F +FG V + I D +T +SRGFGF+TF+ + A++ +L K + G Q++ K
Sbjct: 76 DLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDAIEAVL-KATPHTVKGKQIDPK 134
Query: 97 --KAEP 100
KA P
Sbjct: 135 PAKARP 140
>gi|296192806|ref|XP_002744232.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Callithrix jacchus]
Length = 302
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%), Gaps = 3/67 (4%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEV 95
+ + F QFG V++ +I+ D + + RGFGF+ F A D + K + ++ G +VEV
Sbjct: 113 DLIEHFSQFGTVEKAEIIADKLSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEV 170
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 171 KKAVPKE 177
>gi|402897281|ref|XP_003911697.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q G ++ +IM D + + +GF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFEQCGKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKTIIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|311248536|ref|XP_003123190.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 354
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
+E + ++++ Q+G + + ++RD S+ RSRGFGF+ F + VD +A +
Sbjct: 29 CSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAEVDAAMA-ARPHSID 87
Query: 90 GAQVEVKKAEPKK 102
G V K+ P++
Sbjct: 88 GRVVASKRVVPRE 100
>gi|154313713|ref|XP_001556182.1| hypothetical protein BC1G_05706 [Botryotinia fuckeliana B05.10]
Length = 197
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 39/75 (52%), Gaps = 15/75 (20%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-----------DTEQAVDDLLAKGNKL 86
++ F +FG V+E +++D T RSRGFGF+ + D E+A+ ++ N +
Sbjct: 18 LREKFSEFGTVEEAVVVKDRDTGRSRGFGFVRYGQGNPDSSPEADAEKAIQEM----NSV 73
Query: 87 ELAGAQVEVKKAEPK 101
E G + V KA +
Sbjct: 74 EFDGRTIRVDKASER 88
>gi|184185549|gb|ACC68948.1| heterogeneous nuclear ribonucleoprotein A1 (predicted)
[Rhinolophus ferrumequinum]
Length = 299
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 38/56 (67%), Gaps = 3/56 (5%)
Query: 44 QFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVKKA 98
Q+G + + +MRD +T RSRGFGF+T+ T + VD + A+ +K++ G VE K+A
Sbjct: 36 QWGALTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPHKVD--GRVVEPKRA 89
>gi|157126220|ref|XP_001660855.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873326|gb|EAT37551.1| AAEL010467-PA [Aedes aegypti]
Length = 354
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ +D+F FG+V I+ D + RGFGF+ FD VD ++ + + + ++V
Sbjct: 117 EHLRDYFGAFGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKIILQKSHT-IQNKMLDV 175
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 176 KKALPKQ 182
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K +F ++G V + +M+D T RSRGFGFIT+ VD+ K ++ G VE K+
Sbjct: 28 LKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKPYMVDEAQNK-RPHKIDGRVVEPKR 86
Query: 98 AEPKKP-NLPQ 107
A P++ N P+
Sbjct: 87 AVPRQDINRPE 97
>gi|209148043|gb|ACI32918.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 300
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 41/69 (59%), Gaps = 3/69 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVE 94
+ D+F QFG +++ +++ D T + RGFGF+ F+ + D ++ K + + G +VE
Sbjct: 111 EHLNDYFSQFGAIEKAEVISDKETFKKRGFGFVYFEDNDSADKAVVLKFHTIN--GHKVE 168
Query: 95 VKKAEPKKP 103
VKKA K+
Sbjct: 169 VKKALTKQE 177
>gi|90083957|dbj|BAE90929.1| unnamed protein product [Macaca fascicularis]
Length = 317
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 31 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 89
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 90 VVEPKRA 96
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + +I+ D + + RGFGF+TFD VD ++ + + G EV+K
Sbjct: 128 LRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKIVLQKYHT-INGHNAEVRK 186
Query: 98 A 98
A
Sbjct: 187 A 187
>gi|296485784|tpg|DAA27899.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 341
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 46/79 (58%), Gaps = 5/79 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L + ++ Q+G++ + ++RD ++ RSRG GF+TF + VD +A
Sbjct: 27 GLSFQ-TTEESL---RKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSVTEVDAAMA-A 81
Query: 84 NKLELAGAQVEVKKAEPKK 102
+ G +E ++A P++
Sbjct: 82 RPHSIDGRVLEPRRAIPRE 100
Score = 42.4 bits (98), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F ++G + +I+ D + R RGFGF+TFD VD ++ + + G EV+K
Sbjct: 128 LREYFEKYGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKIVLQKYHA-INGHHAEVRK 186
Query: 98 A 98
A
Sbjct: 187 A 187
>gi|77416975|gb|ABA81883.1| putative glycine-rich RNA binding protein-like [Solanum tuberosum]
Length = 176
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 52 QIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
QI+ D T RSRGFGF+TF EQA+ D + N +L G ++ V +A+
Sbjct: 32 QIINDRETGRSRGFGFVTFKDEQAMRDAIEGMNGQDLDGRKITVNEAQS 80
>gi|194741290|ref|XP_001953122.1| GF17368 [Drosophila ananassae]
gi|190626181|gb|EDV41705.1| GF17368 [Drosophila ananassae]
Length = 385
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 97
Query: 97 KAEPKK 102
+A P++
Sbjct: 98 RAVPRQ 103
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + N + ++VKK
Sbjct: 131 LREYFKDFGQIVGVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKNHT-IKNKSLDVKK 189
Query: 98 AEPKK 102
A K+
Sbjct: 190 AIAKQ 194
>gi|157126218|ref|XP_001660854.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873325|gb|EAT37550.1| AAEL010467-PB [Aedes aegypti]
Length = 348
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ +D+F FG+V I+ D + RGFGF+ FD VD ++ + + + ++V
Sbjct: 117 EHLRDYFGAFGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKIILQKSHT-IQNKMLDV 175
Query: 96 KKAEPKK 102
KKA PK+
Sbjct: 176 KKALPKQ 182
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K +F ++G V + +M+D T RSRGFGFIT+ VD+ K ++ G VE K+
Sbjct: 28 LKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITYSKPYMVDEAQNK-RPHKIDGRVVEPKR 86
Query: 98 AEPKKP-NLPQ 107
A P++ N P+
Sbjct: 87 AVPRQDINRPE 97
>gi|1710623|sp|P51989.1|RO21_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 1;
AltName: Full=hnRNP A2(A)
gi|214741|gb|AAA49948.1| ribonucleoprotein [Xenopus laevis]
Length = 346
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMA-T 69
Query: 84 NKLELAGAQVEVKKA----EPKKP 103
+ G VE K+A E KP
Sbjct: 70 RPHTIDGRVVEPKRAVAREESAKP 93
>gi|133258|sp|P17130.1|ROA1_XENLA RecName: Full=Heterogeneous nuclear ribonucleoproteins A1
homolog; Short=hnRNP A1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName: Full=hnRNP
core protein A1
gi|214239|gb|AAA49741.1| ribonucleoprotein A1a [Xenopus laevis]
Length = 365
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVD-DLLAKGNKLELAG 90
E + ++ F Q+G + + +MRD ++ RSRGFGF+T+ + VD + A+ +K++ G
Sbjct: 24 ETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTDEVDAAMTARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
Score = 42.0 bits (97), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 30/47 (63%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 82
D +++F Q+G ++ +IM D + + RGF F+TF+ +VD ++ +
Sbjct: 119 DHLREYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKIVIQ 165
>gi|311248526|ref|XP_003123185.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 354
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 40/73 (54%), Gaps = 1/73 (1%)
Query: 30 VTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELA 89
+E + ++++ Q+G + + ++RD S+ RSRGFGF+ F + VD +A +
Sbjct: 29 CSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAEVDAAMA-ARPHSID 87
Query: 90 GAQVEVKKAEPKK 102
G V K+ P++
Sbjct: 88 GRVVASKRVVPRE 100
>gi|355753305|gb|EHH57351.1| hypothetical protein EGM_06957 [Macaca fascicularis]
Length = 320
Score = 42.7 bits (99), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q G ++ +IM D + + +GF F+TFD +VD + + + G EV+K
Sbjct: 121 LRDYFEQRGKIEVIEIMTDRGSGKKKGFAFVTFDDNDSVDKTIIQKYHT-VNGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
>gi|148227778|ref|NP_001080390.1| heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Xenopus
laevis]
gi|28302301|gb|AAH46692.1| Hnrpa2b1 protein [Xenopus laevis]
Length = 346
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE +L ++++ Q+G + + +MRD ++ RSRGFGF+TF VD +A
Sbjct: 15 GLSF-ETTEESL---RNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVDAAMA-T 69
Query: 84 NKLELAGAQVEVKKA----EPKKP 103
+ G VE K+A E KP
Sbjct: 70 RPHTIDGRVVEPKRAVAREESAKP 93
>gi|357122080|ref|XP_003562744.1| PREDICTED: uncharacterized protein LOC100841917 [Brachypodium
distachyon]
Length = 324
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
+P L KD F +GDV E +++ D T RS+GFGFIT+ + +A ++ + +L G
Sbjct: 45 DPTL---KDAFSHYGDVCEARVIIDRDTGRSKGFGFITYTSSEAAAAAISAMDGKDLQGR 101
Query: 92 QVEVKKAEPK 101
V+V A +
Sbjct: 102 MVKVAYATDR 111
>gi|356511826|ref|XP_003524623.1| PREDICTED: uncharacterized protein LOC100782808 [Glycine max]
Length = 274
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/112 (25%), Positives = 52/112 (46%), Gaps = 18/112 (16%)
Query: 8 ILTMFINRQTTT---------QKMTGLSLTPVTEP-------ALDE--FKDFFMQFGDVQ 49
+L +RQ ++ Q + +S P T+ + DE ++ F ++G+V
Sbjct: 10 LLRQTASRQVSSELRSSPSFFQAIRSMSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVV 69
Query: 50 EHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
+ +I+ D T RSRGFGFIT+ + + + + +L G + V A +
Sbjct: 70 DARIIMDRETGRSRGFGFITYTSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|148678223|gb|EDL10170.1| mCG1044699 [Mus musculus]
Length = 217
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G + ++M+D + + RGF F+TFD D ++ + + G EVKK
Sbjct: 60 LRDYFEKYGKTEIIEVMKDRQSGKKRGFAFVTFDDHDTADKIVVQKYN-TINGHNCEVKK 118
Query: 98 AEPKKP 103
A K+
Sbjct: 119 ALSKQE 124
>gi|115473215|ref|NP_001060206.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|113611742|dbj|BAF22120.1| Os07g0602600 [Oryza sativa Japonica Group]
gi|222637411|gb|EEE67543.1| hypothetical protein OsJ_25023 [Oryza sativa Japonica Group]
Length = 238
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLAKGNKLELAGAQVEVK 96
KD F +GDV E +I+ D T +S+G+GFIT+ +E+A + A K +L G V V
Sbjct: 47 LKDVFSHYGDVLEARIIIDRDTGKSKGYGFITYTSSEEAAAAVTAMDGK-DLQGRIVRVS 105
Query: 97 KAE 99
A
Sbjct: 106 TAN 108
>gi|325185730|emb|CCA20211.1| conserved unknown protein putative [Albugo laibachii Nc14]
Length = 465
Score = 42.7 bits (99), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + +D F ++G + + +M+D + + RGFGF+TF +D +L + + ++ G
Sbjct: 112 ETTEETLRDHFGKYGPLTDAALMKDKFSGQPRGFGFVTFADVAVLDRVLEESHTID--GR 169
Query: 92 QVEVKKAEPKKPNLPQPSYRR 112
VEVK+A P+ PS R
Sbjct: 170 TVEVKRAIPRDKTASGPSDVR 190
>gi|302845022|ref|XP_002954050.1| hypothetical protein VOLCADRAFT_121254 [Volvox carteri f.
nagariensis]
gi|300260549|gb|EFJ44767.1| hypothetical protein VOLCADRAFT_121254 [Volvox carteri f.
nagariensis]
Length = 344
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+E ++ F Q+G++Q+ IMR +RGFGF+TF +V+ +L + V+
Sbjct: 162 EELRNHFSQYGEIQDSVIMRKDGV--TRGFGFVTFADPISVEKVLVMRQVIR--DKTVDC 217
Query: 96 KKAEPKK 102
K+A P++
Sbjct: 218 KRATPRE 224
>gi|195451840|ref|XP_002073098.1| GK13334 [Drosophila willistoni]
gi|194169183|gb|EDW84084.1| GK13334 [Drosophila willistoni]
Length = 402
Score = 42.7 bits (99), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 41 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 98
Query: 97 KAEPKK 102
+A P++
Sbjct: 99 RAVPRQ 104
Score = 37.7 bits (86), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + + + ++VKK
Sbjct: 132 LREYFKDFGQIVGVNIVSDKETGKKRGFAFIEFDDYDPVDKIILQKSHT-IKNKTLDVKK 190
Query: 98 AEPKK 102
A K+
Sbjct: 191 AIAKQ 195
>gi|410047791|ref|XP_003954550.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2 [Pan troglodytes]
Length = 320
Score = 42.4 bits (98), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F Q+ ++ +IM D + + RGF F+TFD +V ++ + + G EV+K
Sbjct: 121 LRDYFEQYEKIEVIEIMTDXGSGKKRGFAFVTFDDHDSVXKIVIQKYHT-VKGHNCEVRK 179
Query: 98 AEPKK 102
A K+
Sbjct: 180 ALSKQ 184
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 4/71 (5%)
Query: 30 VTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLE 87
V+ +DE + F Q+G + + +MRD +T SRGFGF+T+ T + VD + + +K++
Sbjct: 21 VSFETIDESLRSHFEQWGMLTDCLVMRDPNTKCSRGFGFVTYATVEEVDAAMNTRPHKVD 80
Query: 88 LAGAQVEVKKA 98
G VE K+A
Sbjct: 81 --GRVVEPKRA 89
>gi|195329210|ref|XP_002031304.1| GM25918 [Drosophila sechellia]
gi|194120247|gb|EDW42290.1| GM25918 [Drosophila sechellia]
Length = 385
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 97
Query: 97 KAEPKK 102
+A P++
Sbjct: 98 RAVPRQ 103
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH-SIKNKTLDVKK 189
Query: 98 AEPKK 102
A K+
Sbjct: 190 AIAKQ 194
>gi|17136624|ref|NP_476807.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform A
[Drosophila melanogaster]
gi|281361714|ref|NP_001163602.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform C
[Drosophila melanogaster]
gi|442618907|ref|NP_001262538.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform D
[Drosophila melanogaster]
gi|442618909|ref|NP_476806.2| heterogeneous nuclear ribonucleoprotein at 87F, isoform E
[Drosophila melanogaster]
gi|78099792|sp|P48810.2|RB87F_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 87F; AltName:
Full=HRP36.1 protein; AltName: Full=Protein P11
gi|7299788|gb|AAF54967.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform A
[Drosophila melanogaster]
gi|45825065|gb|AAS77440.1| LD32727p [Drosophila melanogaster]
gi|220951504|gb|ACL88295.1| Hrb87F-PA [synthetic construct]
gi|220959722|gb|ACL92404.1| Hrb87F-PA [synthetic construct]
gi|272476964|gb|ACZ94899.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform C
[Drosophila melanogaster]
gi|325530374|gb|ADZ25120.1| MIP15350p [Drosophila melanogaster]
gi|440217389|gb|AGB95920.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform D
[Drosophila melanogaster]
gi|440217390|gb|AAN13574.2| heterogeneous nuclear ribonucleoprotein at 87F, isoform E
[Drosophila melanogaster]
Length = 385
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 97
Query: 97 KAEPKK 102
+A P++
Sbjct: 98 RAVPRQ 103
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH-SIKNKTLDVKK 189
Query: 98 AEPKK 102
A K+
Sbjct: 190 AIAKQ 194
>gi|8094|emb|CAA38574.1| Hrb87F [Drosophila melanogaster]
Length = 386
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 97
Query: 97 KAEPKK 102
+A P++
Sbjct: 98 RAVPRQ 103
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH-SIKNKTLDVKK 189
Query: 98 AEPKK 102
A K+
Sbjct: 190 AIAKQ 194
>gi|829184|emb|CAA41170.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 386
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 97
Query: 97 KAEPKK 102
+A P++
Sbjct: 98 RAVPRQ 103
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH-SIKNKTLDVKK 189
Query: 98 AEPKK 102
A K+
Sbjct: 190 AIAKQ 194
>gi|8318|emb|CAA42212.1| P11 (hnRNP protein) [Drosophila melanogaster]
Length = 386
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 97
Query: 97 KAEPKK 102
+A P++
Sbjct: 98 RAVPRQ 103
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH-SIKNKTLDVKK 189
Query: 98 AEPKK 102
A K+
Sbjct: 190 AIAKQ 194
>gi|115488680|ref|NP_001066827.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|77555842|gb|ABA98638.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113649334|dbj|BAF29846.1| Os12g0502200 [Oryza sativa Japonica Group]
gi|125579440|gb|EAZ20586.1| hypothetical protein OsJ_36195 [Oryza sativa Japonica Group]
gi|215694288|dbj|BAG89281.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215708787|dbj|BAG94056.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 258
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F +G V E +I+ D T RSRGFGFIT+ + + + + +L G + V
Sbjct: 47 LRDTFANYGQVIEAKIINDRETGRSRGFGFITYASSEEASAAITALDGKDLDGRNIRVNT 106
Query: 98 AEPK 101
A +
Sbjct: 107 ANER 110
>gi|324514790|gb|ADY45988.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 319
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 41/62 (66%), Gaps = 1/62 (1%)
Query: 40 DFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAE 99
+F+ ++G++ + +M+D +T RSRGFGF+++ + VD+ +A + + G V+ K+A
Sbjct: 14 EFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVDEAMANRPHI-VDGKTVDPKRAV 72
Query: 100 PK 101
P+
Sbjct: 73 PR 74
Score = 40.0 bits (92), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 6/69 (8%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELA 89
TE L+E +F +FG V + +I+ D +T + RGF FITFD VD +L K + +++
Sbjct: 99 TEQMLEE---YFGKFGTVIKAEIINDKNTGKPRGFAFITFDDYDPVDKCVLLKSH--QIS 153
Query: 90 GAQVEVKKA 98
+ +VKKA
Sbjct: 154 NFRCDVKKA 162
>gi|335302749|ref|XP_003133427.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 447
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E + ++++ Q+G + + +MRD ++ RSRGFGF+TF + VD +A + G
Sbjct: 125 ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMA-ARPHSIDGR 183
Query: 92 QVEVKKA 98
VE K+A
Sbjct: 184 VVEPKRA 190
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D+F ++G V +I+ D + + RGFGF TFD VD ++ + + G EV+K
Sbjct: 222 LRDYFEEYGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKIVLQKYHT-INGHNAEVRK 280
Query: 98 A 98
A
Sbjct: 281 A 281
>gi|296473573|tpg|DAA15688.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 42.0 bits (97), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q+G + + +MRD +T SRGFG +T+ T + VD + A+ +K++ G
Sbjct: 24 ETTNESLRSHFEQWGTLTDCVLMRDPNTKHSRGFGLVTYATVEEVDAAMNARPHKVD--G 81
Query: 91 AQVEVKKA 98
VE K+A
Sbjct: 82 RVVEPKRA 89
>gi|440800950|gb|ELR21976.1| RNA recognition motif domain containing protein, partial
[Acanthamoeba castellanii str. Neff]
Length = 325
Score = 41.6 bits (96), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGA 91
E ++ ++ F Q G V + +++ DH + RSRGF F++F T + N ++ G
Sbjct: 21 ETNREKLQELFGQHGTVTDVKLIVDHFSGRSRGFAFVSFATSEDATAARDAMNSADVDGR 80
Query: 92 QVEVKKA 98
++ VKKA
Sbjct: 81 RIFVKKA 87
>gi|50059467|gb|AAT02209.2| AUF1 similar protein [Paracentrotus lividus]
gi|51872093|gb|AAU12170.1| AUF1-like protein [Paracentrotus lividus]
Length = 361
Score = 41.6 bits (96), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+ +F +G VQ+ +I +D T + RGFGFI F++ +V + L++ +V+ K
Sbjct: 66 LQQYFSAYGTVQDCEIKKDQVTKKPRGFGFILFESADSVTKV------LDVPEHKVDDKT 119
Query: 98 AEPKKPN 104
+PK N
Sbjct: 120 IDPKPAN 126
>gi|298708562|emb|CBJ30647.1| RNA-binding protein, putative [Ectocarpus siliculosus]
Length = 462
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D K F ++G + + +MR+ T RGFGF+ F + D L + + ++ G ++V
Sbjct: 75 DMLKTHFGKWGALNDVILMRNKITGEPRGFGFVQFQESTSADAALKEEHVID--GRTIDV 132
Query: 96 KKAEPK-KPNLPQPSYRR 112
K+A P+ + LP+ + R
Sbjct: 133 KRAVPRDRAPLPRAAADR 150
>gi|225457213|ref|XP_002284026.1| PREDICTED: uncharacterized protein LOC100256940 [Vitis vinifera]
Length = 277
Score = 41.6 bits (96), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F ++G+V E +++ D T RSRGFGF+TF + + + + +L G +V V
Sbjct: 56 LREAFHKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNY 115
Query: 98 AEPK 101
A +
Sbjct: 116 ATDR 119
>gi|51860098|gb|AAU11302.1| RNA-binding protein AUF1 [Paracentrotus lividus]
Length = 296
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+ +F +G VQ+ +I +D T + RGFGFI F++ +V + L++ +V+ K
Sbjct: 1 LQQYFSAYGTVQDCEIKKDQVTKKPRGFGFILFESADSVTKV------LDVPEHKVDDKT 54
Query: 98 AEPKKPN 104
+PK N
Sbjct: 55 IDPKPAN 61
>gi|345792219|ref|XP_864182.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Canis lupus familiaris]
Length = 321
Score = 41.2 bits (95), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 38 FKD-FFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
KD FF Q+ ++ +IM D + + RGF F+TFD VD ++ + + G EV+
Sbjct: 121 LKDYFFEQYEKIEVIEIMTDRGSGKKRGFAFVTFDDHDFVDKIVIQKCH-PVNGHDHEVR 179
Query: 97 KAEPKK 102
KA K+
Sbjct: 180 KALSKQ 185
Score = 40.4 bits (93), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 4/81 (4%)
Query: 20 QKMTGLSLTPVTEPALDE-FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD 78
+++ L + ++ DE + Q G + + +MRD +T SRGFGF T+ T + VD
Sbjct: 11 EQLWKLFIKGLSSKTTDESLRSHCEQQGALMDCVVMRDPNTKHSRGFGFTTYATREDVDA 70
Query: 79 LL-AKGNKLELAGAQVEVKKA 98
++ A+ +K++ G VE K+A
Sbjct: 71 VMNARPHKMD--GRVVEPKRA 89
>gi|226532482|ref|NP_001150574.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195640298|gb|ACG39617.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 253
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F ++G V E +I+ D + RSRGFGFIT+ + + + + L G + V
Sbjct: 50 LRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNH 109
Query: 98 AEPK 101
A +
Sbjct: 110 ANER 113
>gi|328858559|gb|EGG07671.1| hypothetical protein MELLADRAFT_71659 [Melampsora larici-populina
98AG31]
Length = 163
Score = 41.2 bits (95), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 6/60 (10%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITF---DTEQAVDDLLAKGNKLELAGAQVEVKKA 98
F Q+G+V + +M+D T RSRGFGFITF D QA D L N+ ++ G + V A
Sbjct: 25 FNQYGEVVDAIVMQDRETGRSRGFGFITFSNQDQAQAAIDAL---NEADVDGRNIRVNFA 81
>gi|148233322|ref|NP_001080493.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus laevis]
gi|27924337|gb|AAH45023.1| Hnrpa0-prov protein [Xenopus laevis]
Length = 308
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + F QFG V+ +I+ D + + RGFGF+ F + + D A + G +VEVK
Sbjct: 118 DLLEHFSQFGAVERVEIIADKLSGKKRGFGFVYFASHDSADK-AAVVKFHSVNGHRVEVK 176
Query: 97 KAEPKK 102
KA PK+
Sbjct: 177 KAVPKE 182
>gi|330920718|ref|XP_003299119.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
gi|311327336|gb|EFQ92795.1| hypothetical protein PTT_10054 [Pyrenophora teres f. teres 0-1]
Length = 171
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +FG V+E +++D T RSRGFGF+ + + D + N E G ++ V KA +
Sbjct: 22 FEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQAMNNEEFDGRRIRVDKASDR 81
>gi|189203945|ref|XP_001938308.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985407|gb|EDU50895.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 168
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +FG V+E +++D T RSRGFGF+ + + D + N E G ++ V KA +
Sbjct: 22 FEEFGQVEEAVVVKDRDTGRSRGFGFVRYAQDTEADAAMQAMNNEEFDGRRIRVDKASDR 81
>gi|359806697|ref|NP_001241034.1| uncharacterized protein LOC100799124 [Glycine max]
gi|255645259|gb|ACU23127.1| unknown [Glycine max]
Length = 275
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 45/91 (49%), Gaps = 9/91 (9%)
Query: 20 QKMTGLSLTPVTEP-------ALDE--FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 70
Q + +S P T+ + DE ++ F ++G+V + +I+ D T RSRGFGFIT+
Sbjct: 31 QAIRCMSSAPSTKLFIGGVSYSTDEQSLREAFSKYGEVVDARIIMDRETGRSRGFGFITY 90
Query: 71 DTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
+ + + + +L G + V A +
Sbjct: 91 TSVEEASSAIQALDGQDLHGRPIRVNYANER 121
>gi|363543257|ref|NP_001241843.1| uncharacterized protein LOC100857047 [Zea mays]
gi|238007748|gb|ACR34909.1| unknown [Zea mays]
gi|413916459|gb|AFW56391.1| putative glycine-rich protein [Zea mays]
Length = 261
Score = 41.2 bits (95), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F ++G V E +I+ D + RSRGFGFIT+ + + + + L G + V
Sbjct: 47 LRDEFAKYGQVIEAKIILDRESGRSRGFGFITYTSSEEASAAITAMDGKTLDGRNIRVNH 106
Query: 98 AEPK 101
A +
Sbjct: 107 ANER 110
>gi|361128698|gb|EHL00628.1| putative Cold-inducible RNA-binding protein [Glarea lozoyensis
74030]
Length = 170
Score = 40.8 bits (94), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKA 98
F +FG V+E +++D T RSRGFGF+ + E + + N +E G + V KA
Sbjct: 22 FEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQESDAEAAITAMNNIEFDGRTIRVDKA 78
>gi|449474732|ref|XP_004175903.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A0 [Taeniopygia guttata]
Length = 310
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEVKKAEP 100
F QFG ++ +I+ D + + RGFGF+ F A D + K + ++ G +VEVKKA P
Sbjct: 118 FSQFGPXEKAEIISDKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQ--GHRVEVKKAVP 175
Query: 101 KK 102
K+
Sbjct: 176 KE 177
>gi|118488717|gb|ABK96169.1| unknown [Populus trichocarpa]
Length = 241
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
K+ F ++G+V E +I+ D T RSRGFGF+T+ + + + + +L G +V V
Sbjct: 56 LKEAFDKYGNVVEARIIMDRDTGRSRGFGFVTYTSSEEASSAIQAMDGQDLHGRRVRVNY 115
Query: 98 AEPKKPNLPQPSY 110
A + PQ ++
Sbjct: 116 ATER----PQRTF 124
>gi|33864553|ref|NP_896112.1| RNA recognition motif-containing protein [Synechococcus sp. WH
8102]
gi|33632076|emb|CAE06529.1| RNA-binding region RNP-1 (RNA recognition motif) [Synechococcus sp.
WH 8102]
Length = 214
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNK-LELAGAQVE 94
++ + F QFG+V + + T R RGF F+ ++AV+D +G + EL G +
Sbjct: 15 EDVIELFAQFGEVANCALPLERDTGRKRGFAFVEM-ADEAVEDAAIEGLQGAELMGRPLR 73
Query: 95 VKKAEPK 101
+ KAEP+
Sbjct: 74 INKAEPR 80
>gi|159489456|ref|XP_001702713.1| nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
gi|158280735|gb|EDP06492.1| nuclear ribonucleoprotein [Chlamydomonas reinhardtii]
Length = 356
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+E + F Q+G++Q+ IMR +RGFGF+TF +V+ +L + V+
Sbjct: 151 EELRGHFAQYGEIQDSVIMRKDGV--TRGFGFVTFADPLSVEKVLVMRQVIR--DKTVDC 206
Query: 96 KKAEPKK 102
K+A P++
Sbjct: 207 KRATPRE 213
>gi|390341916|ref|XP_789716.3| PREDICTED: TAR DNA-binding protein 43-like [Strongylocentrotus
purpuratus]
Length = 505
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+E K++F ++G++ + RD T +S+GFGFI + + + ++ K +K++L+ EV
Sbjct: 133 EEMKEYFGKYGELLMAHVKRDPVTQKSKGFGFIRYKDVDSQEGVVEKRHKIDLSSRWCEV 192
Query: 96 K 96
K
Sbjct: 193 K 193
>gi|242083506|ref|XP_002442178.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
gi|241942871|gb|EES16016.1| hypothetical protein SORBIDRAFT_08g015580 [Sorghum bicolor]
Length = 250
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 34/64 (53%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F ++G+V E +I+ D + RSRGFGF+T+ + + + + L G + V
Sbjct: 46 LRDEFAKYGEVIEARIILDRESGRSRGFGFVTYTSSEEASAAITAMDGKTLDGRSIRVNH 105
Query: 98 AEPK 101
A +
Sbjct: 106 ANER 109
>gi|34194032|gb|AAH56530.1| Hnrpa0 protein, partial [Danio rerio]
Length = 303
Score = 40.4 bits (93), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ +FF QFG +++ +++ D T + RGFGF+ F+ + D + + + G +VEVK
Sbjct: 126 DLTEFFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHM-INGHKVEVK 184
Query: 97 KAEPKKP 103
KA K+
Sbjct: 185 KALTKQE 191
>gi|11036|emb|CAA44502.1| hrp36.1 [Drosophila melanogaster]
Length = 326
Score = 40.4 bits (93), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 41/66 (62%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVEVK 96
K F ++G++ + +M+D T RSRGFGFIT+ +D+ A+ +K++ G VE K
Sbjct: 40 LKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITYSQSYMIDNAQNARPHKID--GRTVEPK 97
Query: 97 KAEPKK 102
+A P++
Sbjct: 98 RAVPRQ 103
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+++F FG + I+ D T + RGF FI FD VD ++ + + ++VKK
Sbjct: 131 LREYFKDFGQIVSVNIVSDKDTGKKRGFAFIEFDDYDPVDKIILQKTH-SIKNKTLDVKK 189
Query: 98 AEPKK 102
A K+
Sbjct: 190 AIAKQ 194
>gi|159472653|ref|XP_001694459.1| glycine-rich RNA-binding protein [Chlamydomonas reinhardtii]
gi|158276683|gb|EDP02454.1| glycine-rich RNA-binding protein [Chlamydomonas reinhardtii]
Length = 165
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ + F +FG V++ + D T RSRGFGF+T + A ++ + E G + V
Sbjct: 17 DDLTNLFSKFGAVEDAFVATDRETGRSRGFGFVTLEA-NAAKSACSECDGTEFMGRTIRV 75
Query: 96 KKAEP 100
+A P
Sbjct: 76 NEATP 80
>gi|449462232|ref|XP_004148845.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
gi|449507311|ref|XP_004162995.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Cucumis
sativus]
Length = 171
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEP 100
F +G++ E +I+ D T RSRGFGF+TF E+A+ + N L G + V +A+
Sbjct: 28 FSVYGEIVEAKIVSDRETGRSRGFGFVTFLEEEAMRSAIEAMNGHILDGRNITVNEAQQ 86
>gi|198426742|ref|XP_002131325.1| PREDICTED: similar to cold-inducible RNA-binding protein [Ciona
intestinalis]
Length = 167
Score = 40.4 bits (93), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D+ F FG+V++ I+ D T RSRGF F+TF E+ + + ++ + G V V
Sbjct: 19 DDLTKRFSDFGEVEQVAIITDRDTGRSRGFAFVTFREEEGAATAIKEMHEEDFLGRSVTV 78
Query: 96 KKAEPK 101
++A+ K
Sbjct: 79 REAQSK 84
>gi|402860565|ref|XP_003894696.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 321
Score = 40.0 bits (92), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 27/45 (60%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 82
+D+F Q+G ++ +IM D + + R F FITFD +VD + +
Sbjct: 121 LRDYFEQYGKIEVIEIMTDRGSGKKRDFAFITFDNHDSVDKTVIQ 165
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 40/68 (58%), Gaps = 3/68 (4%)
Query: 32 EPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAG 90
E + + F Q G + + +MRD +T RSRGFGF+T+ T + VD + A+ K++ G
Sbjct: 24 ETTDESLRSHFEQRGMLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARPRKVD--G 81
Query: 91 AQVEVKKA 98
V+ K+A
Sbjct: 82 RTVKPKRA 89
>gi|405121733|gb|AFR96501.1| glycine-rich RNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 146
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 54 MRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
M+D T RSRGFGF+T+ + Q + +A N+ EL G +V V A +
Sbjct: 1 MKDRETGRSRGFGFVTYGSPQEAEAAIAAMNEQELDGRRVRVNMANSR 48
>gi|168702594|ref|ZP_02734871.1| RNA-binding region RNP-1 [Gemmata obscuriglobus UQM 2246]
Length = 144
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + F +G V + Q++ D T RSRGFGF+ + D+ +A N E G ++ V
Sbjct: 19 DLEQLFGNYGTVTKAQVVSDRETGRSRGFGFVEMSS--GADEAIAALNNAEYQGRRLTVN 76
Query: 97 KAEPKK 102
+A+P++
Sbjct: 77 EAKPRE 82
>gi|348511912|ref|XP_003443487.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 301
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVEVK 96
++F Q+G V++ +++ + T + RGFGF+ F A D ++ K + ++ G +VEVK
Sbjct: 113 LTEYFSQYGQVEKSEVISEKETGKKRGFGFVYFTDHDAADKAVVVKFHTVK--GHKVEVK 170
Query: 97 KAEPKK 102
KA K+
Sbjct: 171 KALTKQ 176
>gi|157929888|gb|ABW04132.1| Hnrpa01 protein [Epinephelus coioides]
Length = 329
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 3/68 (4%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDD-LLAKGNKLELAGAQVE 94
+ ++F Q+G +++ +++ D T + RGFGF+ F+ + D ++ K + + G +VE
Sbjct: 116 EHLHEYFSQYGVIEKAEVISDKQTGKKRGFGFVYFEDNDSADKAVVLKYHTIN--GHKVE 173
Query: 95 VKKAEPKK 102
VKKA K+
Sbjct: 174 VKKALTKQ 181
>gi|390478133|ref|XP_003735431.1| PREDICTED: uncharacterized protein LOC100896665 [Callithrix
jacchus]
Length = 221
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%), Gaps = 1/42 (2%)
Query: 61 RSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
+ RGF F+TFD VD ++ + + + G EVKKA PK+
Sbjct: 8 KMRGFAFVTFDDHDTVDKIVVQKYHI-INGHNCEVKKALPKQ 48
>gi|296485782|tpg|DAA27897.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 360
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 33/51 (64%)
Query: 31 TEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLA 81
+E + K+++ Q+G++ + ++R ++ +SRGFGF+TF + VD +A
Sbjct: 38 SETTEESLKNYYQQWGELTDCVVIRGLASQKSRGFGFVTFSSVAEVDAAMA 88
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 28/45 (62%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAK 82
+++F ++G + +I+ D + + RGFGF+TFD VD ++ +
Sbjct: 136 LREYFEKYGKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKIMLQ 180
>gi|147774036|emb|CAN71872.1| hypothetical protein VITISV_038162 [Vitis vinifera]
Length = 272
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 36/64 (56%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F ++G+V E +++ D T RSRGFGF+TF + + + + +L G +V V
Sbjct: 56 LREAFYKYGEVIEARVIVDRETGRSRGFGFVTFTSSEEASSAIQALDGQDLHGRRVRVNY 115
Query: 98 AEPK 101
A +
Sbjct: 116 ATDR 119
>gi|296121841|ref|YP_003629619.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
gi|296014181|gb|ADG67420.1| RNP-1 like RNA-binding protein [Planctomyces limnophilus DSM 3776]
Length = 146
Score = 39.3 bits (90), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 6/69 (8%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFD--TEQAVDDLLAKGNKLELAGAQV 93
D+ ++ F + G V Q++ D T RSRGFGF+ E+AV+ + N E G +
Sbjct: 17 DDLREAFSEHGTVTRAQVVSDRETGRSRGFGFVEMSDGAERAVEAM----NGAEFQGRTL 72
Query: 94 EVKKAEPKK 102
V +A P++
Sbjct: 73 TVNEARPRE 81
>gi|149921891|ref|ZP_01910335.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
gi|149817244|gb|EDM76721.1| RNA-binding protein [Plesiocystis pacifica SIR-1]
Length = 189
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 3/66 (4%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF-DTEQAVDDLLAKGNKLELAGAQVEVK 96
K+ F +FG +++ +++ D T RSRGFGF+T+ D E A L G E+ G ++ V
Sbjct: 15 LKEVFAEFGALEDARVILDRETGRSRGFGFVTYVDEEGATKALGLDGQ--EVDGRRIRVD 72
Query: 97 KAEPKK 102
+A+ K+
Sbjct: 73 RAQEKE 78
>gi|449477140|ref|XP_004154942.1| PREDICTED: uncharacterized LOC101218446 [Cucumis sativus]
Length = 287
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 36/64 (56%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F ++G+V E +++ D T RSRGFGF+T+ + + + + +L G +V V
Sbjct: 59 LREAFTKYGEVIEARVIVDRETGRSRGFGFVTYTSSEEASSAIQALDGQDLHGRRVRVNY 118
Query: 98 AEPK 101
A +
Sbjct: 119 ANDR 122
>gi|115481496|ref|NP_001064341.1| Os10g0321700 [Oryza sativa Japonica Group]
gi|110288867|gb|ABG66004.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|113638950|dbj|BAF26255.1| Os10g0321700 [Oryza sativa Japonica Group]
Length = 317
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 24/33 (72%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF 70
K+ F +G+V E +++ D +T RSRGFGF+T+
Sbjct: 47 LKEAFANYGEVIEARVIVDRTTGRSRGFGFVTY 79
>gi|449299310|gb|EMC95324.1| hypothetical protein BAUCODRAFT_123780 [Baudoinia compniacensis
UAMH 10762]
Length = 169
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +FG V+E +++D T RSRGFGF+ F + A D +A N +E G + V KA +
Sbjct: 23 FEEFGQVEEAIVIKDRDTGRSRGFGFVRFAEDAAADSAIAAMNNVEFDGRTIRVDKASER 82
>gi|195654321|gb|ACG46628.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|238010482|gb|ACR36276.1| unknown [Zea mays]
Length = 252
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F ++G V E +I+ D + RSRGFGF+T+ + + + + L G + V
Sbjct: 46 LRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKTLDGRSIRVNH 105
Query: 98 AEPK 101
A K
Sbjct: 106 ANEK 109
>gi|440640410|gb|ELR10329.1| hypothetical protein GMDG_04711 [Geomyces destructans 20631-21]
Length = 173
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +FG V+E +++D T RSRGFGF+ + E D +A N +E G + V KA +
Sbjct: 22 FEEFGAVEEAVVVKDRDTGRSRGFGFVRYGQEADADAAIAAMNNIEFDGRTIRVDKASER 81
>gi|226506948|ref|NP_001149776.1| glycine-rich RNA-binding protein 7 [Zea mays]
gi|195633803|gb|ACG36746.1| glycine-rich RNA-binding protein 7 [Zea mays]
Length = 276
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 33/64 (51%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
+D F ++G V E +I+ D + RSRGFGF+T+ + + + + L G + V
Sbjct: 46 LRDEFAKYGQVIEARIIIDRESGRSRGFGFVTYTSSEEASAAITALDGKTLDGRSIRVNH 105
Query: 98 AEPK 101
A K
Sbjct: 106 ANEK 109
>gi|449681946|ref|XP_002154888.2| PREDICTED: uncharacterized protein LOC100204546 [Hydra
magnipapillata]
Length = 306
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 37 EFKDFFMQFGDVQE-HQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ ++ F ++G + H +M +RSRGFGF+ F+T++ D +A N+ L + V
Sbjct: 20 DLEEMFSKYGTPYDAHVVMEKEDPNRSRGFGFVEFETKEEADAAIAGLNETPLGHRHIMV 79
Query: 96 KKA 98
+ A
Sbjct: 80 QHA 82
>gi|78183598|ref|YP_376032.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
gi|78167892|gb|ABB24989.1| RNA-binding region RNP-1 [Synechococcus sp. CC9902]
Length = 196
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + F QFG+V + + T R RGF F+ + A + + EL G + +
Sbjct: 15 EDVTELFAQFGEVVNCALPLERDTGRKRGFAFVEMSDDAAEEAAIEGLQGAELMGRPLRI 74
Query: 96 KKAEPK 101
KAEP+
Sbjct: 75 NKAEPR 80
>gi|403411649|emb|CCL98349.1| predicted protein [Fibroporia radiculosa]
Length = 168
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 49 QEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
++ +MRD T RSRGFGF+T+ + + N+ EL G +++V A +
Sbjct: 41 EDSIVMRDRDTGRSRGFGFVTYSSGMEAQSAITNLNEQELDGRRIKVNLANAR 93
>gi|349803889|gb|AEQ17417.1| putative heterogeneous nuclear ribonucleoprotein a1 [Hymenochirus
curtipes]
Length = 185
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 40/66 (60%), Gaps = 6/66 (9%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLL-AKGNKLELAGAQVE---VKK 97
F Q+G + + +MRD ++ RSRGFGF+T+ + VD + A+ ++++ G VE V +
Sbjct: 2 FEQWGTLTDCVVMRDPNSKRSRGFGFVTYASTDEVDAAMDARPHRVD--GRVVEPRAVSR 59
Query: 98 AEPKKP 103
+ +P
Sbjct: 60 EDSSRP 65
>gi|452979373|gb|EME79135.1| hypothetical protein MYCFIDRAFT_57804 [Pseudocercospora fijiensis
CIRAD86]
Length = 181
Score = 38.5 bits (88), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +FG V E +++D T RSRGFGF+ F + A D +A N +E G + V KA +
Sbjct: 22 FEEFGQVDEAVVVKDRDTGRSRGFGFVRFAEDAAADSAIAAMNNVEFDGRTIRVDKASDR 81
>gi|453082840|gb|EMF10887.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 178
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%)
Query: 42 FMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPK 101
F +FG V E +++D T RSRGFGF+ F + D +A N +E G + V KA +
Sbjct: 22 FEEFGQVDEAVVVKDRDTGRSRGFGFVRFAEDAGADAAIAAMNNVEFDGRTIRVDKASDR 81
>gi|283781639|ref|YP_003372394.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
gi|283440092|gb|ADB18534.1| RNP-1 like RNA-binding protein [Pirellula staleyi DSM 6068]
Length = 156
Score = 38.1 bits (87), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITF----DTEQAVD 77
+ + F FGDV +++ D T RSRGFGF+ D E AV+
Sbjct: 18 DLEALFKPFGDVAAAEVIMDRETGRSRGFGFVQMANDADCEPAVN 62
>gi|333917516|ref|YP_004491248.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
gi|333747716|gb|AEF92893.1| RNP-1 like RNA-binding protein [Delftia sp. Cs1-4]
Length = 179
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + F QFG V ++M + T RS+GFGF+ ++ + N L G + V
Sbjct: 17 NDLEQAFSQFGAVTSARVMMERDTGRSKGFGFVEMGSDAEAQAAVQGMNGQPLGGRSLVV 76
Query: 96 KKAEPKKPNLPQ 107
+A P +P P+
Sbjct: 77 NEARPMEPRPPR 88
>gi|326319545|ref|YP_004237217.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323376381|gb|ADX48650.1| RNP-1 like RNA-binding protein [Acidovorax avenae subsp. avenae
ATCC 19860]
Length = 172
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + F QFG V ++M + T RS+GFGF+ ++ + N L G + V
Sbjct: 17 NDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQALGGRSIVV 76
Query: 96 KKAEPKKPNLP 106
+A P +P P
Sbjct: 77 NEARPMEPRPP 87
>gi|383760540|ref|YP_005439526.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
gi|381381210|dbj|BAL98027.1| RNP-1 like RNA-binding protein, Glycine-rich [Rubrivivax
gelatinosus IL144]
Length = 161
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 33/67 (49%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
D + F QFG V ++M D T RS+GFGF+ ++ + N L G + V
Sbjct: 17 DSLQQAFAQFGTVTSAKVMMDRETGRSKGFGFVEMGSDAEAQAAINGMNGQPLEGRAIVV 76
Query: 96 KKAEPKK 102
+A P++
Sbjct: 77 NEARPRE 83
>gi|120613408|ref|YP_973086.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
gi|120591872|gb|ABM35312.1| RNP-1-like RNA-binding protein [Acidovorax citrulli AAC00-1]
Length = 176
Score = 37.7 bits (86), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 35/71 (49%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + F QFG V ++M + T RS+GFGF+ ++ + N L G + V
Sbjct: 17 NDLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQALGGRSIVV 76
Query: 96 KKAEPKKPNLP 106
+A P +P P
Sbjct: 77 NEARPMEPRPP 87
>gi|171056877|ref|YP_001789226.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
gi|170774322|gb|ACB32461.1| RNP-1 like RNA-binding protein [Leptothrix cholodnii SP-6]
Length = 157
Score = 37.7 bits (86), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ + F QFG V ++M D T RS+GFGF+ ++ + N + G + V
Sbjct: 17 EDLNEAFSQFGAVNSAKVMMDRETGRSKGFGFVEMGSDPEAQAAINGLNGQAIGGRAIVV 76
Query: 96 KKAEPKK 102
+A P++
Sbjct: 77 NEARPRE 83
>gi|255547195|ref|XP_002514655.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223546259|gb|EEF47761.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 267
Score = 37.7 bits (86), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 38 FKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKK 97
++ F ++G+V E +++ D T RSRGF F+T+ + + + + +L G +V V
Sbjct: 56 LREAFGKYGEVIEARVIIDRETGRSRGFAFVTYTSSEEASSAIQALDGQDLHGRRVRVNY 115
Query: 98 AEPKKPNLPQPSY 110
A + P+ S+
Sbjct: 116 ANDR----PRTSF 124
>gi|407941455|ref|YP_006857096.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
gi|407899249|gb|AFU48458.1| RNP-1 like RNA-binding protein [Acidovorax sp. KKS102]
Length = 188
Score = 37.4 bits (85), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + F QFG V ++M + T RS+GFGF+ ++ + N L G + V
Sbjct: 18 DLEQAFGQFGAVTSAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSIVVN 77
Query: 97 KAEPKKPNLP 106
+A P +P P
Sbjct: 78 EARPMEPRPP 87
>gi|121607153|ref|YP_994960.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
gi|121551793|gb|ABM55942.1| RNP-1 like RNA-binding protein [Verminephrobacter eiseniae EF01-2]
Length = 175
Score = 37.4 bits (85), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 34/70 (48%)
Query: 37 EFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVK 96
+ + F QFG V ++M + T RS+GFGF+ ++ + N L G + V
Sbjct: 18 DLEQAFGQFGAVASAKVMMERDTGRSKGFGFVEMGSDAEAQAAINGMNGQPLGGRSIVVN 77
Query: 97 KAEPKKPNLP 106
+A P +P P
Sbjct: 78 EARPMEPRPP 87
>gi|441657392|ref|XP_004091176.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Nomascus leucogenys]
gi|441657395|ref|XP_004091177.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Nomascus leucogenys]
Length = 188
Score = 37.4 bits (85), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 52 QIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEVKKAEPKK 102
+IM D + + RGF F+TFD +VD ++ + + EV+KA K+
Sbjct: 4 EIMTDRGSGKKRGFAFVTFDDHDSVDKIVIRKYHT-VNDHNCEVRKALSKQ 53
>gi|313220630|emb|CBY31476.1| unnamed protein product [Oikopleura dioica]
Length = 321
Score = 37.4 bits (85), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE K +F FGDVQ+ + D +T +SRGFGF+ F E +V+ ++A+
Sbjct: 53 GLSKNTTTE----SLKAYFANFGDVQDVVVKVDPNTQQSRGFGFVLFINEDSVEAVVAQQ 108
Query: 84 NKLELAGAQVEVKKAE 99
+ EL G +++ KKA+
Sbjct: 109 HH-ELDGKKIDPKKAQ 123
>gi|313235219|emb|CBY10784.1| unnamed protein product [Oikopleura dioica]
Length = 321
Score = 37.4 bits (85), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 24 GLSLTPVTEPALDEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKG 83
GLS TE K +F FGDVQ+ + D +T +SRGFGF+ F E +V+ ++A+
Sbjct: 53 GLSKNTTTE----SLKAYFANFGDVQDVVVKVDPNTQQSRGFGFVLFINEDSVEAVVAQQ 108
Query: 84 NKLELAGAQVEVKKAE 99
+ EL G +++ KKA+
Sbjct: 109 HH-ELDGKKIDPKKAQ 123
>gi|225708562|gb|ACO10127.1| Heterogeneous nuclear ribonucleoprotein A0 [Osmerus mordax]
Length = 308
Score = 37.4 bits (85), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
+ ++F QFG+VQ+ +++ + T + RGFGF+ F T+ D A + G +VEV
Sbjct: 113 EHLTEYFTQFGEVQKAEVISEKETGKKRGFGFVHF-TDDDAADKAALLKFHTINGHRVEV 171
Query: 96 KKAEPKK 102
KKA K+
Sbjct: 172 KKALTKQ 178
>gi|298707286|emb|CBJ25913.1| eukaryotic initiation factor 4B [Ectocarpus siliculosus]
Length = 568
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 41/66 (62%), Gaps = 2/66 (3%)
Query: 36 DEFKDFFMQFGDVQEHQIMRDHSTSRSRGFGFITFDTEQAVDDLLAKGNKLELAGAQVEV 95
++ +FF Q G V + +++D +T +++GFG++TF +Q + D L K + L G V V
Sbjct: 155 NDIAEFFHQCG-VNDVYLVQDRTTGQAKGFGYVTFGDKQGLLDAL-KMTQRNLGGRDVRV 212
Query: 96 KKAEPK 101
+ A+P+
Sbjct: 213 EVAKPQ 218
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.144 0.445
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,378,386,539
Number of Sequences: 23463169
Number of extensions: 431665277
Number of successful extensions: 9346395
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 44262
Number of HSP's successfully gapped in prelim test: 40999
Number of HSP's that attempted gapping in prelim test: 3254376
Number of HSP's gapped (non-prelim): 1664407
length of query: 279
length of database: 8,064,228,071
effective HSP length: 140
effective length of query: 139
effective length of database: 9,074,351,707
effective search space: 1261334887273
effective search space used: 1261334887273
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 76 (33.9 bits)