Your job contains 1 sequence.
>023642
MFVTASGVDFDEMGYAMSRFEIESEFYDAADTVNQASNSRSKFKKPLSALDHEIAQLTKL
KSEPKEHFSKEVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPV
DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD
QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR
ELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWITCI
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 023642
(279 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2139335 - symbol:AT4G03020 "AT4G03020" species... 1044 1.7e-105 1
UNIPROTKB|Q8TEB1 - symbol:DCAF11 "DDB1- and CUL4-associat... 270 9.7e-23 1
ZFIN|ZDB-GENE-050809-116 - symbol:dcaf11 "ddb1 and cul4 a... 269 1.2e-22 1
UNIPROTKB|Q5R7H5 - symbol:DCAF11 "DDB1- and CUL4-associat... 269 1.3e-22 1
UNIPROTKB|F1SGL8 - symbol:DCAF11 "Uncharacterized protein... 268 1.6e-22 1
RGD|1311288 - symbol:Dcaf11 "DDB1 and CUL4 associated fac... 266 2.7e-22 1
UNIPROTKB|F1MVT2 - symbol:DCAF11 "DDB1- and CUL4-associat... 265 3.4e-22 1
UNIPROTKB|Q5E9I8 - symbol:DCAF11 "DDB1- and CUL4-associat... 265 3.4e-22 1
MGI|MGI:90168 - symbol:Dcaf11 "DDB1 and CUL4 associated f... 265 3.5e-22 1
ASPGD|ASPL0000074293 - symbol:AN4800 species:162425 "Emer... 223 1.8e-17 1
DICTYBASE|DDB_G0291832 - symbol:wdr23 "WD40 repeat-contai... 129 4.6e-09 2
FB|FBgn0034527 - symbol:CG9945 species:7227 "Drosophila m... 152 1.5e-08 2
WB|WBGene00008419 - symbol:wdr-23 species:6239 "Caenorhab... 122 0.00012 1
UNIPROTKB|P90794 - symbol:wdr-23 "DDB1- and CUL4-associat... 122 0.00012 1
TAIR|locus:2140215 - symbol:WDR5b "AT4G02730" species:370... 117 0.00018 1
UNIPROTKB|Q6GMD2 - symbol:wdr61 "WD repeat-containing pro... 114 0.00034 1
UNIPROTKB|F1PUU2 - symbol:NLE1 "Uncharacterized protein" ... 84 0.00052 2
RGD|1308301 - symbol:Nle1 "notchless homolog 1 (Drosophil... 84 0.00088 2
>TAIR|locus:2139335 [details] [associations]
symbol:AT4G03020 "AT4G03020" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0080008 "Cul4-RING ubiquitin
ligase complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 HSSP:P16649
GO:GO:0080008 KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135
OMA:RMLHQRE EMBL:AY099735 EMBL:BT000357 IPI:IPI00532225
RefSeq:NP_001190666.1 RefSeq:NP_192211.2 UniGene:At.34236
ProteinModelPortal:Q8LPI5 SMR:Q8LPI5 IntAct:Q8LPI5 STRING:Q8LPI5
PaxDb:Q8LPI5 PRIDE:Q8LPI5 EnsemblPlants:AT4G03020.1
EnsemblPlants:AT4G03020.2 GeneID:828111 KEGG:ath:AT4G03020
TAIR:At4g03020 InParanoid:Q8LPI5 PhylomeDB:Q8LPI5
ProtClustDB:CLSN2690277 Genevestigator:Q8LPI5 Uniprot:Q8LPI5
Length = 493
Score = 1044 (372.6 bits), Expect = 1.7e-105, P = 1.7e-105
Identities = 203/274 (74%), Positives = 232/274 (84%)
Query: 1 MFVTASGVDFDEMGYAMSRFEIESEFYDAA-DTVNQASNSRS-KFKKPLSALDHEIAQLT 58
MF S D DEMGYAMSR EIES+ D D S+S S + + L+ LDHEI+Q+T
Sbjct: 1 MFFGPSEFDADEMGYAMSRLEIESDLCDTGKDVCGVGSSSGSHRSSEHLADLDHEISQVT 60
Query: 59 KLKSEPKEHFSKEVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPW 118
KLKS P + +S+EVPG+ LPVSTV+MLAGRE N+SGRGRFSAADCCHMLSRYLP GPW
Sbjct: 61 KLKSSPHQRYSREVPGRHQLPVSTVRMLAGRESNFSGRGRFSAADCCHMLSRYLPTKGPW 120
Query: 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178
VDQ SRAYVSQFS DGSLF+AGFQ S+IRIY+VE+GWK+QKDILAKSLRWTVTDTSLS
Sbjct: 121 LVDQMDSRAYVSQFSTDGSLFIAGFQGSRIRIYNVEKGWKVQKDILAKSLRWTVTDTSLS 180
Query: 179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD 238
PDQR+LVYASMSPIVHIVDVGSG+ ES ANVTEIHDGLDFS+ +DGGYSFGIFS+KFSTD
Sbjct: 181 PDQRNLVYASMSPIVHIVDVGSGSTESHANVTEIHDGLDFSSDEDGGYSFGIFSVKFSTD 240
Query: 239 GRELVAGSSDDCIYVYDLEANKLSLRILAHTVNI 272
GRE+VAGSSDD IYVYDLEAN++SLR +AHT ++
Sbjct: 241 GREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDV 274
>UNIPROTKB|Q8TEB1 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9606 "Homo sapiens" [GO:0016567 "protein ubiquitination"
evidence=IEA;IC] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 EMBL:CH471078 EMBL:AL136295 GO:GO:0080008 CTD:80344
HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 EMBL:AF267858 EMBL:AK027223 EMBL:AK057636
EMBL:AK074296 EMBL:BX161405 EMBL:BX247970 EMBL:BC008858
EMBL:BC067132 EMBL:AF130070 EMBL:AL833831 IPI:IPI00178972
IPI:IPI00328589 IPI:IPI00328631 RefSeq:NP_001156956.1
RefSeq:NP_079506.3 RefSeq:NP_852002.1 UniGene:Hs.525251
ProteinModelPortal:Q8TEB1 SMR:Q8TEB1 IntAct:Q8TEB1 STRING:Q8TEB1
PhosphoSite:Q8TEB1 DMDM:37538034 PaxDb:Q8TEB1 PRIDE:Q8TEB1
Ensembl:ENST00000396936 Ensembl:ENST00000396941
Ensembl:ENST00000446197 Ensembl:ENST00000559115 GeneID:80344
KEGG:hsa:80344 UCSC:uc001wlv.3 UCSC:uc001wlz.3 UCSC:uc001wmb.4
GeneCards:GC14P024583 HGNC:HGNC:20258 HPA:HPA031157 MIM:613317
neXtProt:NX_Q8TEB1 PharmGKB:PA165478701 InParanoid:Q8TEB1
OMA:RMLHQRE PhylomeDB:Q8TEB1 GenomeRNAi:80344 NextBio:70930
Bgee:Q8TEB1 CleanEx:HS_WDR23 Genevestigator:Q8TEB1
GermOnline:ENSG00000100897 Uniprot:Q8TEB1
Length = 546
Score = 270 (100.1 bits), Expect = 9.7e-23, P = 9.7e-23
Identities = 63/187 (33%), Positives = 103/187 (55%)
Query: 84 KMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGF 143
+ML RE RG FS + ++S +LP N D + +A+ +S DG +F++
Sbjct: 133 RMLHQRERGLCHRGSFSLGEQSRVISHFLP-NDLGFTDSYSQKAFCGIYSKDGQIFMSAC 191
Query: 144 QASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV-GSG 201
Q IR+YD G ++ K I A+ + W+V D + +PD H +Y+S S +HI ++ G G
Sbjct: 192 QDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEG 251
Query: 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261
+ H LD D+ F +FS+ S+DGRE++ G++D C+YV+D E N+
Sbjct: 252 ---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRR 299
Query: 262 SLRILAH 268
+L+I +H
Sbjct: 300 TLQIESH 306
>ZFIN|ZDB-GENE-050809-116 [details] [associations]
symbol:dcaf11 "ddb1 and cul4 associated factor 11"
species:7955 "Danio rerio" [GO:0003824 "catalytic activity"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-050809-116 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
CTD:80344 HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801
OrthoDB:EOG44TP7K InterPro:IPR017399 PIRSF:PIRSF038135
GeneTree:ENSGT00700000104507 OMA:RMLHQRE EMBL:CR405710
EMBL:BC099999 IPI:IPI00491931 RefSeq:NP_001026845.1
UniGene:Dr.134153 STRING:Q499B0 Ensembl:ENSDART00000002992
GeneID:567578 KEGG:dre:567578 InParanoid:Q499B0 NextBio:20888741
Uniprot:Q499B0
Length = 541
Score = 269 (99.8 bits), Expect = 1.2e-22, P = 1.2e-22
Identities = 62/189 (32%), Positives = 102/189 (53%)
Query: 81 STVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFV 140
S MLA RE FS +C + S +LP + + D + + +S +G++F+
Sbjct: 134 SFTHMLAEREQGRCRGSSFSHGECSRIRSHFLPNHVVYK-DTYQQKVFCGVYSDEGNMFL 192
Query: 141 AGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199
+ Q IR+YD RG + ++K + A+ + W++ D +PD R ++Y+S S +H+ V
Sbjct: 193 SACQDQNIRLYDTSRGRFTLKKTVKARDVGWSILDVCFTPDARCVLYSSWSDYIHVCSVD 252
Query: 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259
E H LD + D+ F +FSL STDG+E++ G++D C+YV+D E N
Sbjct: 253 GDN--------ETHTALDLNP-DER--RFCVFSLAASTDGKEILGGANDGCLYVFDREQN 301
Query: 260 KLSLRILAH 268
K +L+I AH
Sbjct: 302 KRTLKIDAH 310
>UNIPROTKB|Q5R7H5 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9601 "Pongo abelii" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016567 GO:GO:0080008 CTD:80344 HOGENOM:HOG000241217
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:CR857585
EMBL:CR860141 RefSeq:NP_001126335.1 RefSeq:NP_001128756.1
UniGene:Pab.18820 UniGene:Pab.19847 ProteinModelPortal:Q5R7H5
GeneID:100173316 GeneID:100189652 KEGG:pon:100173316
KEGG:pon:100189652 InParanoid:Q5R7H5 Uniprot:Q5R7H5
Length = 546
Score = 269 (99.8 bits), Expect = 1.3e-22, P = 1.3e-22
Identities = 63/187 (33%), Positives = 103/187 (55%)
Query: 84 KMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGF 143
+ML RE RG FS + ++S +LP N D + +A+ +S DG +F++
Sbjct: 133 RMLHQRERGLCHRGSFSLGEQSRVISHFLP-NDLGFTDSYSQKAFCGIYSKDGQIFMSAC 191
Query: 144 QASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV-GSG 201
Q IR+YD G ++ K I A+ + W+V D + +PD H +Y+S S +HI ++ G G
Sbjct: 192 QDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGSHFLYSSWSDYIHICNIYGEG 251
Query: 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261
+ H LD D+ F +FS+ S+DGRE++ G++D C+YV+D E N+
Sbjct: 252 ---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRR 299
Query: 262 SLRILAH 268
+L+I +H
Sbjct: 300 TLQIESH 306
>UNIPROTKB|F1SGL8 [details] [associations]
symbol:DCAF11 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:CT961055 RefSeq:XP_001928394.1 UniGene:Ssc.26086
ProteinModelPortal:F1SGL8 Ensembl:ENSSSCT00000002247
GeneID:100157270 KEGG:ssc:100157270 Uniprot:F1SGL8
Length = 546
Score = 268 (99.4 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 62/187 (33%), Positives = 102/187 (54%)
Query: 84 KMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGF 143
+ML RE RG FS + ++S +LP N +D + +A+ +S DG +F++
Sbjct: 133 QMLLQRERGLCHRGSFSLGEQSRVMSHFLP-NDLGFIDTYSQKAFCGIYSKDGQIFMSAC 191
Query: 144 QASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV-GSG 201
Q IR+YD G + K I A+ + W+V D + +PD H +Y+S S +HI ++ G G
Sbjct: 192 QDQVIRMYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNIYGEG 251
Query: 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261
+ H LD + F +FS+ S+DGRE++ G++D C+YV+D E N+
Sbjct: 252 ---------DTHTALDLRPVER---RFAVFSIAVSSDGREVLGGANDGCLYVFDREQNRR 299
Query: 262 SLRILAH 268
+L+I +H
Sbjct: 300 TLQIESH 306
>RGD|1311288 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11" species:10116
"Rattus norvegicus" [GO:0016567 "protein ubiquitination"
evidence=IEA] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISO;ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 RGD:1311288 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 KO:K11801 OrthoDB:EOG44TP7K InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:BC087110 EMBL:BC091364 IPI:IPI00196528 RefSeq:NP_001009686.1
UniGene:Rn.16542 ProteinModelPortal:Q5M9G8 STRING:Q5M9G8
Ensembl:ENSRNOT00000059987 GeneID:305895 KEGG:rno:305895
UCSC:RGD:1311288 InParanoid:Q5M9G8 NextBio:655204
Genevestigator:Q5M9G8 Uniprot:Q5M9G8
Length = 549
Score = 266 (98.7 bits), Expect = 2.7e-22, P = 2.7e-22
Identities = 73/260 (28%), Positives = 128/260 (49%)
Query: 14 GYAMSRFEIESEFYDAADTVNQASNSR--SKFKKPLSAL-DHEIAQLTKLKSEPKEHFSK 70
G + ++ D+ + + A + R ++ P+ A D + ++K+ + +
Sbjct: 60 GGGAANLQLIQALSDSEEEHDSAWDGRLGDRYNPPVDATPDTRELEYNEIKTRVELATGR 119
Query: 71 EVPGKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVS 130
G+ S +ML RE RG FS + ++S +LP N D + +A+
Sbjct: 120 LGLGRTAQEHSFPRMLHQRERGLCHRGSFSLGEQSRVMSHFLP-NDLSFTDTYSQKAFCG 178
Query: 131 QFSADGSLFVAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM 189
+S DG +F++ Q IR+YD G + K I A+ + W+V D + +PD H +Y+S
Sbjct: 179 IYSKDGQIFMSACQDQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSW 238
Query: 190 SPIVHIVDV-GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD 248
S +HI + G G + H LD D+ F +FS+ S+DGRE++ G++D
Sbjct: 239 SDYIHICSIYGEG---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGAND 286
Query: 249 DCIYVYDLEANKLSLRILAH 268
C+YV+D E N+ +L+I +H
Sbjct: 287 GCLYVFDREQNRRTLQIESH 306
>UNIPROTKB|F1MVT2 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0080008 "Cul4-RING ubiquitin ligase
complex" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0080008 IPI:IPI00710208 UniGene:Bt.20137
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:DAAA02028032 ProteinModelPortal:F1MVT2
Ensembl:ENSBTAT00000028515 ArrayExpress:F1MVT2 Uniprot:F1MVT2
Length = 546
Score = 265 (98.3 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 63/191 (32%), Positives = 105/191 (54%)
Query: 80 VSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLF 139
+S +ML RE +G FS + ++S +LP N D + +A+ +S DG +F
Sbjct: 129 LSFPQMLHQRERGLCHQGSFSLGERSRVMSHFLP-NDLGFTDTYSQKAFCGIYSKDGQIF 187
Query: 140 VAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198
++ Q IR+YD G ++ K I A+ + W+V D + +PD H +Y+S S +HI ++
Sbjct: 188 MSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNI 247
Query: 199 -GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257
G G + H LD D+ F +FS+ S+DGRE++ G++D C+YV+D E
Sbjct: 248 YGEG---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFDRE 295
Query: 258 ANKLSLRILAH 268
N+ +L+I +H
Sbjct: 296 QNRRTLQIESH 306
>UNIPROTKB|Q5E9I8 [details] [associations]
symbol:DCAF11 "DDB1- and CUL4-associated factor 11"
species:9913 "Bos taurus" [GO:0016567 "protein ubiquitination"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 UniPathway:UPA00143 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 EMBL:BT020932 IPI:IPI00710208
RefSeq:NP_001014954.1 UniGene:Bt.20137 ProteinModelPortal:Q5E9I8
STRING:Q5E9I8 GeneID:539433 KEGG:bta:539433 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 InParanoid:Q5E9I8 KO:K11801
OrthoDB:EOG44TP7K NextBio:20877986 InterPro:IPR017399
PIRSF:PIRSF038135 Uniprot:Q5E9I8
Length = 546
Score = 265 (98.3 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 63/191 (32%), Positives = 105/191 (54%)
Query: 80 VSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLF 139
+S +ML RE +G FS + ++S +LP N D + +A+ +S DG +F
Sbjct: 129 LSFPQMLHQRERGLCHQGSFSLGERSRVMSHFLP-NDLGFTDTYSQKAFCGIYSKDGQIF 187
Query: 140 VAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198
++ Q IR+YD G ++ K I A+ + W+V D + +PD H +Y+S S +HI ++
Sbjct: 188 MSACQDQTIRLYDCRYGRFRKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHICNI 247
Query: 199 -GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257
G G + H LD D+ F +FS+ S+DGRE++ G++D C+YV+D E
Sbjct: 248 YGEG---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFDRE 295
Query: 258 ANKLSLRILAH 268
N+ +L+I +H
Sbjct: 296 QNRRTLQIESH 306
>MGI|MGI:90168 [details] [associations]
symbol:Dcaf11 "DDB1 and CUL4 associated factor 11"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
[GO:0080008 "Cul4-RING ubiquitin ligase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
UniPathway:UPA00143 MGI:MGI:90168 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0016567 GO:GO:0080008 CTD:80344
HOGENOM:HOG000241217 HOVERGEN:HBG055176 KO:K11801 OrthoDB:EOG44TP7K
InterPro:IPR017399 PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507
OMA:RMLHQRE EMBL:AK033540 EMBL:AK152395 EMBL:BC008545 EMBL:BC037001
IPI:IPI00127271 IPI:IPI00378419 RefSeq:NP_001185938.1
RefSeq:NP_598495.1 UniGene:Mm.11535 UniGene:Mm.488383
ProteinModelPortal:Q91VU6 SMR:Q91VU6 STRING:Q91VU6
PhosphoSite:Q91VU6 PaxDb:Q91VU6 PRIDE:Q91VU6 DNASU:28199
Ensembl:ENSMUST00000072530 Ensembl:ENSMUST00000117236
Ensembl:ENSMUST00000121622 GeneID:28199 KEGG:mmu:28199
UCSC:uc007tyz.2 InParanoid:Q91VU6 ChiTaRS:DCAF11 NextBio:306796
Bgee:Q91VU6 CleanEx:MM_WDR23 Genevestigator:Q91VU6
GermOnline:ENSMUSG00000022214 Uniprot:Q91VU6
Length = 549
Score = 265 (98.3 bits), Expect = 3.5e-22, P = 3.5e-22
Identities = 65/193 (33%), Positives = 104/193 (53%)
Query: 78 LPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGS 137
L S +ML RE RG FS + ++S +LP N D + +A+ +S DG
Sbjct: 127 LQQSFPQMLHQRERGLCHRGSFSLGEQSRVMSHFLP-NDLSFTDTYSQKAFCGIYSKDGQ 185
Query: 138 LFVAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196
+F++ Q IR+YD G + K I A+ + W+V D + +PD H +Y+S S +HI
Sbjct: 186 IFMSACQDQTIRLYDCRYGRFHKFKSIKARDVGWSVLDVAFTPDGNHFLYSSWSDYIHIC 245
Query: 197 DV-GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYD 255
++ G G + H LD D+ F +FS+ S+DGRE++ G++D C+YV+D
Sbjct: 246 NIYGEG---------DTHTALDLRP-DER--RFAVFSIAVSSDGREVLGGANDGCLYVFD 293
Query: 256 LEANKLSLRILAH 268
E N+ +L+I +H
Sbjct: 294 REQNRRTLQIESH 306
>ASPGD|ASPL0000074293 [details] [associations]
symbol:AN4800 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:BN001303 EMBL:AACD01000081 KO:K11801 RefSeq:XP_662404.1
ProteinModelPortal:Q5B3T0 EnsemblFungi:CADANIAT00005621
GeneID:2872599 KEGG:ani:AN4800.2 HOGENOM:HOG000194480 OMA:KSSPHIL
OrthoDB:EOG4NCQND Uniprot:Q5B3T0
Length = 660
Score = 223 (83.6 bits), Expect = 1.8e-17, P = 1.8e-17
Identities = 52/148 (35%), Positives = 77/148 (52%)
Query: 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERG--WKIQKDILAKSLRWTVTDTSLSPDQR 182
++ Y QFS DG+ F + Q ++R+YD WK K + WT+TD +LSPD R
Sbjct: 230 AKCYSGQFSDDGNFFFSCAQDFKVRMYDTSNPYEWKYYKTVDYPLASWTITDATLSPDNR 289
Query: 183 HLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD--GGYSFGIFSLKFSTDGR 240
L Y+S+ +V + S + ++ A D G F ++S++FS DGR
Sbjct: 290 FLAYSSLRQLVCLAPTDPAD-SSDPIILDLASSAQRRVARDIFGRDGFAVWSVRFSGDGR 348
Query: 241 ELVAGSSDDCIYVYDLEANKLSLRILAH 268
E+VAG+ D + VYDLE + LRI H
Sbjct: 349 EIVAGTGDHSVIVYDLETRQSVLRIRNH 376
>DICTYBASE|DDB_G0291832 [details] [associations]
symbol:wdr23 "WD40 repeat-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0008150
"biological_process" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0003674 "molecular_function" evidence=ND]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
dictyBase:DDB_G0291832 GenomeReviews:CM000155_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 EMBL:AAFI02000185 KO:K11801
RefSeq:XP_629959.1 ProteinModelPortal:Q54E28
EnsemblProtists:DDB0237531 GeneID:8628365 KEGG:ddi:DDB_G0291832
InParanoid:Q54E28 OMA:NIRISQH ProtClustDB:CLSZ2429513
Uniprot:Q54E28
Length = 661
Score = 129 (50.5 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 29/88 (32%), Positives = 46/88 (52%)
Query: 111 YLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW 170
YLP+N V SR + + ++DG + Q IRI++ +I K+I A + W
Sbjct: 248 YLPMNRAETVISMPSRIFCCKITSDGKRLMTASQDKMIRIFNTSNFEQI-KEIQAIDINW 306
Query: 171 TVTDTSLSPDQRHLVYASMSPIVHIVDV 198
++ DT SPDQ L+Y+S S + + V
Sbjct: 307 SIIDTDYSPDQNWLIYSSWSHYIQLCRV 334
Score = 77 (32.2 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 15/41 (36%), Positives = 24/41 (58%)
Query: 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268
F +F LKFS + +E++ G S+ I +YDLE ++ H
Sbjct: 383 FCVFGLKFSPNNKEILCGCSNGEIIIYDLEGRQVVNHFRGH 423
Score = 46 (21.3 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 231 FSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261
FS +T + + +GS + IY+YD+ KL
Sbjct: 571 FSPIETTAQKYIYSGSFNGMIYIYDVLTGKL 601
>FB|FBgn0034527 [details] [associations]
symbol:CG9945 species:7227 "Drosophila melanogaster"
[GO:0005875 "microtubule associated complex" evidence=IDA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:AE013599 GO:GO:0005875 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 HSSP:P16649 KO:K11801 InterPro:IPR017399
PIRSF:PIRSF038135 GeneTree:ENSGT00700000104507 OMA:RMLHQRE
EMBL:AY075228 RefSeq:NP_611494.1 RefSeq:NP_725981.1 UniGene:Dm.5593
SMR:Q7JYQ4 STRING:Q7JYQ4 EnsemblMetazoa:FBtr0086225
EnsemblMetazoa:FBtr0086226 GeneID:37329 KEGG:dme:Dmel_CG9945
UCSC:CG9945-RA FlyBase:FBgn0034527 InParanoid:Q7JYQ4
OrthoDB:EOG4Q83CM GenomeRNAi:37329 NextBio:803134 Uniprot:Q7JYQ4
Length = 511
Score = 152 (58.6 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 55/257 (21%), Positives = 111/257 (43%)
Query: 10 FDEMGYAMSRFEIESEFYDAADTVNQASNSRSKFKKPLSALDHEIAQLTKLKSEPKEHFS 69
F+ + + ++ ++ S++ + V + KF+K + + EI + L S P ++
Sbjct: 26 FNVINFTVNAMDLRSDYCSSEMPVIRGKPDLVKFQK--TDMYKEIQASSGLVSNPNNRWN 83
Query: 70 KEVPGKRHLPVSTVKMLAGREGNYSG--RGRFSAADCCHMLSRYLPVNGPWPVDQTTSRA 127
V L RE + FS ++ + Y+P + S+
Sbjct: 84 ------------LVHALQQRENGLASPHSASFSKNQQRYISNLYIPNKKATRLMSLESKI 131
Query: 128 YVSQFSADGSLFVAGFQASQIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVY 186
+V++F+ GS + Q +RIYD +G + + I A+ + W++ D SP+ H Y
Sbjct: 132 FVTKFNRSGSKLLTACQDGFVRIYDGAKGTYHLLNRIRARDVEWSIIDADFSPNGEHFAY 191
Query: 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246
++ S + I+ V G E +++ GL + IFSL++S G +++ GS
Sbjct: 192 STWSRSLFIMPVNGG--EDDCQWIDVN-GLP-------SHRLAIFSLRYSPTGDKIIGGS 241
Query: 247 SDDCIYVYDLEANKLSL 263
++ + V D+ +
Sbjct: 242 NNSTVIVTDIRTRNTQI 258
Score = 42 (19.8 bits), Expect = 1.5e-08, Sum P(2) = 1.5e-08
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 238 DGRELVAGSSDDCIYVYDLEANKLSLRILAHTV 270
D ++AG D + VYDL S R L+ +V
Sbjct: 279 DPNVIIAGCDDGLLKVYDLRTTFRS-RDLSKSV 310
>WB|WBGene00008419 [details] [associations]
symbol:wdr-23 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0080135 "regulation of
cellular response to stress" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005634 GO:GO:0008340 GO:GO:0018991 GO:GO:0040010
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122 KO:K11801
InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906 PIR:T20359
PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 46/203 (22%), Positives = 91/203 (44%)
Query: 74 GKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFS 133
G R + ++ + R+ G + +L+ +LP N VD+ ++++ +Q+
Sbjct: 115 GPRPSTSNNMEFILNRDLQKRGTSISNPRTVARVLNSHLP-NQKRRVDRVATKSFCTQYI 173
Query: 134 ADGSLFVAGFQASQIRIY--DVERGWKIQKDILAKSLR-----WTVTDTSLSPDQRHLVY 186
+G+ V Q +IR Y + ++ K + + LR W++ DT++S + + Y
Sbjct: 174 QNGTKIVVASQDEKIRFYQRNPDKSKYRSKYMKSDELRVDQCGWSILDTAISLNGDLIAY 233
Query: 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246
+ V VG N+T +D + + G +F +KFS ++V G+
Sbjct: 234 GTWKDAVF---VGKLDFTERQNITWFP--IDLNG-EPGRDHCAVFCVKFSDSSEQIVCGT 287
Query: 247 SDDCIYVYDLEANKLSLRIL-AH 268
S I+V+D+E + I+ AH
Sbjct: 288 SQYSIHVFDVEQRRRIRTIVNAH 310
>UNIPROTKB|P90794 [details] [associations]
symbol:wdr-23 "DDB1- and CUL4-associated factor 11 homolog"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005634 GO:GO:0008340 GO:GO:0018991
GO:GO:0040010 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 eggNOG:COG2319 GO:GO:0040018 GO:GO:0000122
KO:K11801 InterPro:IPR017399 PIRSF:PIRSF038135 EMBL:Z73906
PIR:T20359 PIR:T20360 RefSeq:NP_492124.1 RefSeq:NP_492125.1
ProteinModelPortal:P90794 SMR:P90794 DIP:DIP-26027N
MINT:MINT-1089361 STRING:P90794 EnsemblMetazoa:D2030.9a.1
EnsemblMetazoa:D2030.9a.2 EnsemblMetazoa:D2030.9a.3 GeneID:172518
KEGG:cel:CELE_D2030.9 CTD:172518 WormBase:D2030.9a
WormBase:D2030.9b GeneTree:ENSGT00700000104507 InParanoid:P90794
OMA:FADETGH NextBio:875863 ArrayExpress:P90794 GO:GO:0080135
Uniprot:P90794
Length = 571
Score = 122 (48.0 bits), Expect = 0.00012, P = 0.00012
Identities = 46/203 (22%), Positives = 91/203 (44%)
Query: 74 GKRHLPVSTVKMLAGREGNYSGRGRFSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFS 133
G R + ++ + R+ G + +L+ +LP N VD+ ++++ +Q+
Sbjct: 115 GPRPSTSNNMEFILNRDLQKRGTSISNPRTVARVLNSHLP-NQKRRVDRVATKSFCTQYI 173
Query: 134 ADGSLFVAGFQASQIRIY--DVERGWKIQKDILAKSLR-----WTVTDTSLSPDQRHLVY 186
+G+ V Q +IR Y + ++ K + + LR W++ DT++S + + Y
Sbjct: 174 QNGTKIVVASQDEKIRFYQRNPDKSKYRSKYMKSDELRVDQCGWSILDTAISLNGDLIAY 233
Query: 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246
+ V VG N+T +D + + G +F +KFS ++V G+
Sbjct: 234 GTWKDAVF---VGKLDFTERQNITWFP--IDLNG-EPGRDHCAVFCVKFSDSSEQIVCGT 287
Query: 247 SDDCIYVYDLEANKLSLRIL-AH 268
S I+V+D+E + I+ AH
Sbjct: 288 SQYSIHVFDVEQRRRIRTIVNAH 310
>TAIR|locus:2140215 [details] [associations]
symbol:WDR5b "AT4G02730" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] [GO:0080008 "Cul4-RING ubiquitin ligase complex"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 GenomeReviews:CT486007_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AL161495 HSSP:P16649 GO:GO:0080008 EMBL:AC004044 KO:K14963
HOGENOM:HOG000091642 ProtClustDB:CLSN2684254 EMBL:AF439825
EMBL:AY088121 EMBL:AY125558 IPI:IPI00523608 PIR:G85034
RefSeq:NP_192182.1 UniGene:At.26627 ProteinModelPortal:Q9SY00
SMR:Q9SY00 EnsemblPlants:AT4G02730.1 GeneID:828189
KEGG:ath:AT4G02730 TAIR:At4g02730 InParanoid:Q9SY00 OMA:ETIRIWE
PhylomeDB:Q9SY00 ArrayExpress:Q9SY00 Genevestigator:Q9SY00
Uniprot:Q9SY00
Length = 333
Score = 117 (46.2 bits), Expect = 0.00018, P = 0.00018
Identities = 36/147 (24%), Positives = 71/147 (48%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP 191
F+ DGSL V+ +I+D + G ++ I KS V+ SP+ + ++ A++
Sbjct: 178 FNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSP--AVSFAKFSPNGKFILVATLDS 235
Query: 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCI 251
+ + + +G V H F +F + T+G+ +V+GS D+C+
Sbjct: 236 TLKLSNYATG---KFLKVYTGHTNKVFCITS----AFSV------TNGKYIVSGSEDNCV 282
Query: 252 YVYDLEANKLSLRILAHTVNIALWITC 278
Y++DL+A + R+ HT + + ++C
Sbjct: 283 YLWDLQARNILQRLEGHT-DAVISVSC 308
>UNIPROTKB|Q6GMD2 [details] [associations]
symbol:wdr61 "WD repeat-containing protein 61" species:8355
"Xenopus laevis" [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0016593 "Cdc73/Paf1 complex"
evidence=ISS] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=ISS]
[GO:0035327 "transcriptionally active chromatin" evidence=ISS]
[GO:0045638 "negative regulation of myeloid cell differentiation"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0051571
"positive regulation of histone H3-K4 methylation" evidence=ISS]
[GO:0055087 "Ski complex" evidence=ISS] [GO:0080182 "histone H3-K4
trimethylation" evidence=ISS] [GO:2001162 "positive regulation of
histone H3-K79 methylation" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0035327 GO:GO:0051571
GO:GO:0032968 GO:GO:0080182 GO:GO:0016593 GO:GO:0045638
GO:GO:2001162 GO:GO:0055087 CTD:80349 HOVERGEN:HBG059813 KO:K12602
EMBL:BC074136 RefSeq:NP_001086055.1 UniGene:Xl.23922
ProteinModelPortal:Q6GMD2 GeneID:444484 KEGG:xla:444484
Xenbase:XB-GENE-5751613 Uniprot:Q6GMD2
Length = 305
Score = 114 (45.2 bits), Expect = 0.00034, P = 0.00034
Identities = 40/157 (25%), Positives = 71/157 (45%)
Query: 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179
+D A+ FS D G ++ I+ VE G +K+ + + + SP
Sbjct: 102 IDAGPVDAWSVAFSPDSQHLATGSHVGKVNIFGVETG---KKEYSLDTRGKFILSIAYSP 158
Query: 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239
D ++L ++ I++I D+ +G + +H L+ G++ I SL FSTD
Sbjct: 159 DGKYLASGAIDGIINIFDIATGKL--------LHT-LE-------GHAMPIRSLTFSTDS 202
Query: 240 RELVAGSSDDCIYVYDLEANKLSLRILAH---TVNIA 273
+ LV S D I +YD++ L+ + H +N+A
Sbjct: 203 QLLVTASDDGYIKIYDVQHASLAATLSGHGSWVLNVA 239
>UNIPROTKB|F1PUU2 [details] [associations]
symbol:NLE1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007219 "Notch signaling pathway"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0001826
"inner cell mass cell differentiation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
InterPro:IPR001632 GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0007219 GeneTree:ENSGT00690000102167
PRINTS:PR00319 GO:GO:0001826 EMBL:AAEX03006625
Ensembl:ENSCAFT00000029052 Uniprot:F1PUU2
Length = 436
Score = 84 (34.6 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268
G+ ++ + +S D R LV+GSSD + V+D++A KL+ + H
Sbjct: 363 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLAADLPGH 406
Score = 73 (30.8 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 28/105 (26%), Positives = 51/105 (48%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS-----LSPDQRHLVY 186
+S DG +G + QI ++D G ++ + +LA +W +T S +P+ R++
Sbjct: 115 WSPDGKTLASGCKNGQILLWDPSTGKQVGR-VLAGHSKW-ITGLSWEPLHANPECRYMAS 172
Query: 187 ASMSPIVHIVDVGSGTMESLA-----NVTEIH---DGLDFSAADD 223
+S V + D +G E + +VT + DGL +SA+ D
Sbjct: 173 SSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQD 217
>RGD|1308301 [details] [associations]
symbol:Nle1 "notchless homolog 1 (Drosophila)" species:10116
"Rattus norvegicus" [GO:0001826 "inner cell mass cell
differentiation" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007219
"Notch signaling pathway" evidence=IEA;ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 InterPro:IPR001632 RGD:1308301
GO:GO:0005730 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0007219 GeneTree:ENSGT00690000102167 PRINTS:PR00319
GO:GO:0001826 HOGENOM:HOG000091641 KO:K14855 InterPro:IPR012972
Pfam:PF08154 CTD:54475 HOVERGEN:HBG007602 OrthoDB:EOG4BCDMS
EMBL:BC166567 IPI:IPI00896225 RefSeq:NP_001121006.1
UniGene:Rn.19087 STRING:B2GV82 Ensembl:ENSRNOT00000011320
GeneID:303372 KEGG:rno:303372 NextBio:651216 Genevestigator:B2GV82
Uniprot:B2GV82
Length = 487
Score = 84 (34.6 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 16/44 (36%), Positives = 28/44 (63%)
Query: 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268
G+ ++ + +S D R LV+GSSD + V+D++A KL+ + H
Sbjct: 414 GHVAAVYQIAWSADSRLLVSGSSDSTLKVWDVKAQKLTTDLPGH 457
Score = 72 (30.4 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 27/105 (25%), Positives = 51/105 (48%)
Query: 132 FSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS-----LSPDQRHLVY 186
+S DG +G + QI ++D G ++ + + S +W +T S ++P+ R++
Sbjct: 166 WSPDGKKLASGCKNGQILLWDPSTGTQVGRTLTGHS-KW-ITGLSWEPLHMNPECRYVAS 223
Query: 187 ASMSPIVHIVDVGSGTMESLA-----NVTEIH---DGLDFSAADD 223
+S V + D +G E + +VT + DGL +SA+ D
Sbjct: 224 SSKDGSVRVWDTTAGRCERILTGHTQSVTCLRWGGDGLLYSASQD 268
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.133 0.393 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 279 279 0.00081 115 3 11 22 0.50 33
33 0.41 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 18
No. of states in DFA: 609 (65 KB)
Total size of DFA: 197 KB (2112 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 25.66u 0.08s 25.74t Elapsed: 00:00:01
Total cpu time: 25.67u 0.08s 25.75t Elapsed: 00:00:01
Start: Fri May 10 12:32:03 2013 End: Fri May 10 12:32:04 2013