Query 023642
Match_columns 279
No_of_seqs 300 out of 2623
Neff 10.4
Searched_HMMs 29240
Date Mon Mar 25 10:20:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023642.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023642hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ow8_A WD repeat-containing pr 100.0 1.7E-26 5.8E-31 193.8 23.4 167 92-277 129-298 (321)
2 4gqb_B Methylosome protein 50; 100.0 4E-26 1.4E-30 193.3 24.0 169 92-277 89-265 (344)
3 1vyh_C Platelet-activating fac 99.9 9.1E-26 3.1E-30 195.5 23.4 166 93-277 116-284 (410)
4 1got_B GT-beta; complex (GTP-b 99.9 1.2E-25 4.1E-30 189.9 22.9 161 100-277 160-320 (340)
5 2ynn_A Coatomer subunit beta'; 99.9 2.2E-25 7.6E-30 185.4 22.8 183 93-277 63-278 (304)
6 2ynn_A Coatomer subunit beta'; 99.9 3.8E-25 1.3E-29 184.0 22.9 183 92-277 20-236 (304)
7 3frx_A Guanine nucleotide-bind 99.9 1.4E-24 4.8E-29 181.9 25.6 174 100-277 36-245 (319)
8 4gqb_B Methylosome protein 50; 99.9 2.8E-25 9.6E-30 188.1 21.2 169 92-278 134-308 (344)
9 1got_B GT-beta; complex (GTP-b 99.9 1E-24 3.5E-29 184.3 22.9 178 83-277 48-234 (340)
10 3fm0_A Protein CIAO1; WDR39,SG 99.9 1.1E-24 3.6E-29 184.6 22.1 172 92-277 23-202 (345)
11 1vyh_C Platelet-activating fac 99.9 1.3E-24 4.4E-29 188.3 23.2 166 93-277 158-346 (410)
12 3ow8_A WD repeat-containing pr 99.9 6E-25 2E-29 184.4 20.4 160 100-278 98-257 (321)
13 2pbi_B Guanine nucleotide-bind 99.9 2.4E-24 8.3E-29 183.0 23.7 161 100-277 172-334 (354)
14 4g56_B MGC81050 protein; prote 99.9 1.2E-24 4.2E-29 185.1 21.7 182 93-278 102-320 (357)
15 3fm0_A Protein CIAO1; WDR39,SG 99.9 2.4E-24 8.2E-29 182.4 21.4 172 92-277 68-260 (345)
16 2hes_X YDR267CP; beta-propelle 99.9 1.9E-24 6.6E-29 181.8 20.2 172 92-277 65-258 (330)
17 1erj_A Transcriptional repress 99.9 1.1E-23 3.7E-28 181.4 24.8 183 92-277 71-318 (393)
18 1erj_A Transcriptional repress 99.9 7E-24 2.4E-28 182.6 23.4 183 91-277 129-360 (393)
19 2pm7_B Protein transport prote 99.9 6.4E-24 2.2E-28 176.0 22.1 171 92-277 16-212 (297)
20 2hes_X YDR267CP; beta-propelle 99.9 5.2E-24 1.8E-28 179.2 21.6 165 100-277 30-205 (330)
21 4ery_A WD repeat-containing pr 99.9 1.5E-23 5.1E-28 174.6 23.5 165 93-276 31-199 (312)
22 1nr0_A Actin interacting prote 99.9 7.6E-24 2.6E-28 192.4 22.4 186 92-277 154-375 (611)
23 2pbi_B Guanine nucleotide-bind 99.9 1.1E-23 3.8E-28 178.9 21.8 180 82-277 56-248 (354)
24 1nr0_A Actin interacting prote 99.9 1E-23 3.4E-28 191.7 22.9 171 92-278 25-248 (611)
25 4ery_A WD repeat-containing pr 99.9 2.7E-23 9.3E-28 173.0 22.6 141 118-277 17-157 (312)
26 2xzm_R RACK1; ribosome, transl 99.9 5.3E-23 1.8E-27 173.8 24.4 160 100-277 45-221 (343)
27 3dwl_C Actin-related protein 2 99.9 2E-24 6.8E-29 184.3 14.7 186 92-277 18-259 (377)
28 4h5i_A Guanine nucleotide-exch 99.9 3.5E-23 1.2E-27 176.7 19.2 173 91-278 139-321 (365)
29 3iz6_a 40S ribosomal protein R 99.9 4.9E-23 1.7E-27 176.5 20.0 166 100-277 176-352 (380)
30 2aq5_A Coronin-1A; WD40 repeat 99.9 1.2E-22 4.2E-27 175.1 22.2 163 101-277 54-228 (402)
31 3frx_A Guanine nucleotide-bind 99.9 1.8E-22 6.1E-27 169.0 22.2 142 119-277 12-156 (319)
32 3dm0_A Maltose-binding peripla 99.9 1.6E-22 5.3E-27 186.3 23.6 162 100-277 401-569 (694)
33 2ymu_A WD-40 repeat protein; u 99.9 1.4E-22 4.9E-27 182.1 22.6 163 92-277 392-557 (577)
34 2xzm_R RACK1; ribosome, transl 99.9 1.4E-22 4.7E-27 171.3 21.0 166 93-277 84-263 (343)
35 3vl1_A 26S proteasome regulato 99.9 5.7E-23 2E-27 177.6 18.8 181 93-276 105-342 (420)
36 3mmy_A MRNA export factor; mRN 99.9 4.9E-22 1.7E-26 168.0 23.1 174 100-277 60-323 (368)
37 4h5i_A Guanine nucleotide-exch 99.9 7.7E-23 2.6E-27 174.5 18.2 152 92-258 183-343 (365)
38 3bg1_A Protein SEC13 homolog; 99.9 2.5E-23 8.5E-28 174.0 14.4 171 93-277 21-220 (316)
39 2ymu_A WD-40 repeat protein; u 99.9 5E-22 1.7E-26 178.6 23.9 180 92-277 23-229 (577)
40 3f3f_A Nucleoporin SEH1; struc 99.9 4.7E-22 1.6E-26 166.5 22.2 185 93-277 19-314 (351)
41 4e54_B DNA damage-binding prot 99.9 7.6E-23 2.6E-27 178.4 17.3 170 100-270 138-339 (435)
42 4g56_B MGC81050 protein; prote 99.9 2.8E-22 9.7E-27 170.5 20.2 187 91-278 48-278 (357)
43 2pm7_B Protein transport prote 99.9 2.7E-22 9.2E-27 166.2 19.4 142 119-277 4-153 (297)
44 1gxr_A ESG1, transducin-like e 99.9 2.8E-21 9.5E-26 161.6 25.2 181 93-277 105-314 (337)
45 4aow_A Guanine nucleotide-bind 99.9 2.4E-21 8.1E-26 162.5 24.8 157 119-276 33-263 (340)
46 3iz6_a 40S ribosomal protein R 99.9 2.3E-22 7.7E-27 172.4 18.7 148 100-259 224-376 (380)
47 3dm0_A Maltose-binding peripla 99.9 3.3E-22 1.1E-26 184.2 20.9 168 93-277 438-610 (694)
48 1k8k_C P40, ARP2/3 complex 41 99.9 1.1E-21 3.6E-26 166.6 21.9 172 93-277 16-210 (372)
49 2pm9_A Protein WEB1, protein t 99.9 3.9E-22 1.3E-26 171.9 18.0 185 93-277 75-313 (416)
50 3v7d_B Cell division control p 99.9 2.9E-21 9.9E-26 169.3 23.7 174 100-277 138-360 (464)
51 3jrp_A Fusion protein of prote 99.9 1.3E-21 4.4E-26 166.3 20.8 170 93-277 19-214 (379)
52 1gxr_A ESG1, transducin-like e 99.9 7.1E-22 2.4E-26 165.2 18.2 144 119-277 46-191 (337)
53 3vl1_A 26S proteasome regulato 99.9 1.6E-21 5.6E-26 168.5 20.9 165 92-276 63-233 (420)
54 2oaj_A Protein SNI1; WD40 repe 99.9 9E-22 3.1E-26 185.9 20.6 172 93-275 443-686 (902)
55 3bg1_A Protein SEC13 homolog; 99.9 2E-22 6.7E-27 168.5 14.0 144 119-277 8-158 (316)
56 3ei3_B DNA damage-binding prot 99.9 2.7E-21 9.1E-26 165.4 21.4 159 100-277 92-258 (383)
57 4ggc_A P55CDC, cell division c 99.9 1E-20 3.5E-25 157.1 24.1 184 94-277 34-292 (318)
58 2j04_A TAU60, YPL007P, hypothe 99.9 4.9E-22 1.7E-26 174.9 16.8 155 105-277 65-234 (588)
59 1k8k_C P40, ARP2/3 complex 41 99.9 4E-21 1.4E-25 163.0 21.8 180 93-277 60-252 (372)
60 1r5m_A SIR4-interacting protei 99.9 5.3E-21 1.8E-25 164.7 22.7 183 92-278 52-298 (425)
61 1sq9_A Antiviral protein SKI8; 99.9 7.1E-21 2.4E-25 163.1 22.8 175 100-278 144-363 (397)
62 3zwl_B Eukaryotic translation 99.9 7E-21 2.4E-25 161.0 22.4 176 93-277 40-226 (369)
63 2j04_B YDR362CP, TAU91; beta p 99.9 4.7E-22 1.6E-26 177.0 15.6 162 100-278 231-406 (524)
64 4aez_A CDC20, WD repeat-contai 99.9 6.6E-21 2.3E-25 164.3 22.0 159 100-278 109-268 (401)
65 4e54_B DNA damage-binding prot 99.9 6.5E-22 2.2E-26 172.5 15.8 143 119-277 114-258 (435)
66 4aow_A Guanine nucleotide-bind 99.9 2.1E-21 7.3E-26 162.7 18.3 149 100-260 191-339 (340)
67 3k26_A Polycomb protein EED; W 99.9 1.6E-21 5.5E-26 164.9 17.3 178 100-277 91-343 (366)
68 3gre_A Serine/threonine-protei 99.9 4.9E-21 1.7E-25 166.6 19.5 158 119-277 57-265 (437)
69 2aq5_A Coronin-1A; WD40 repeat 99.9 1.1E-20 3.8E-25 162.8 21.1 169 93-277 89-275 (402)
70 3f3f_A Nucleoporin SEH1; struc 99.9 3.9E-21 1.3E-25 160.9 17.3 141 118-265 5-150 (351)
71 3jrp_A Fusion protein of prote 99.9 6.9E-21 2.3E-25 161.7 19.0 146 117-277 4-155 (379)
72 3dw8_B Serine/threonine-protei 99.9 6.3E-21 2.1E-25 166.0 19.1 176 92-277 35-293 (447)
73 4gq1_A NUP37; propeller, trans 99.9 9.9E-22 3.4E-26 169.2 13.8 173 100-275 107-303 (393)
74 2xyi_A Probable histone-bindin 99.9 1.3E-20 4.6E-25 164.0 21.0 165 100-277 147-329 (430)
75 2w18_A PALB2, fancn, partner a 99.9 8.6E-21 3E-25 157.5 18.6 159 103-274 156-330 (356)
76 3ei3_B DNA damage-binding prot 99.9 1.6E-20 5.6E-25 160.5 21.0 143 119-277 68-212 (383)
77 3gre_A Serine/threonine-protei 99.9 1.7E-21 6E-26 169.4 15.2 165 100-267 188-368 (437)
78 3k26_A Polycomb protein EED; W 99.9 1.4E-21 4.6E-26 165.3 13.8 151 100-266 40-200 (366)
79 1r5m_A SIR4-interacting protei 99.9 9.2E-21 3.2E-25 163.2 19.2 158 100-277 223-402 (425)
80 3i2n_A WD repeat-containing pr 99.9 2.3E-20 7.9E-25 157.3 21.1 178 100-277 86-329 (357)
81 3mmy_A MRNA export factor; mRN 99.9 9.5E-21 3.2E-25 160.1 18.6 139 112-269 27-171 (368)
82 2pm9_A Protein WEB1, protein t 99.9 1.2E-20 4.2E-25 162.5 19.4 161 101-277 42-222 (416)
83 3mkq_A Coatomer beta'-subunit; 99.9 1.3E-20 4.5E-25 175.9 20.9 142 117-277 6-148 (814)
84 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.2E-20 7.6E-25 163.4 21.1 161 92-268 109-281 (450)
85 3mkq_A Coatomer beta'-subunit; 99.9 1.6E-20 5.5E-25 175.3 21.3 182 93-277 21-236 (814)
86 3jro_A Fusion protein of prote 99.9 1.5E-20 5.1E-25 174.7 20.8 171 93-278 17-213 (753)
87 3dwl_C Actin-related protein 2 99.9 1.4E-21 4.9E-26 166.5 12.7 157 119-277 6-213 (377)
88 3lrv_A PRE-mRNA-splicing facto 99.9 4.7E-21 1.6E-25 161.8 15.5 150 100-267 91-253 (343)
89 2j04_B YDR362CP, TAU91; beta p 99.9 5.6E-21 1.9E-25 170.1 16.1 161 101-277 180-363 (524)
90 4gga_A P55CDC, cell division c 99.9 1.1E-19 3.7E-24 157.7 23.6 178 100-277 121-372 (420)
91 4aez_A CDC20, WD repeat-contai 99.9 5.9E-20 2E-24 158.3 21.4 156 102-277 194-357 (401)
92 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5.7E-20 1.9E-24 160.8 21.3 182 92-277 156-362 (450)
93 1pgu_A Actin interacting prote 99.9 5.6E-20 1.9E-24 166.0 21.8 168 91-277 24-261 (615)
94 3sfz_A APAF-1, apoptotic pepti 99.9 7.9E-20 2.7E-24 178.1 22.9 141 118-277 609-751 (1249)
95 2xyi_A Probable histone-bindin 99.8 6.6E-20 2.3E-24 159.6 20.0 162 100-277 200-386 (430)
96 3sfz_A APAF-1, apoptotic pepti 99.8 8.5E-20 2.9E-24 177.9 22.7 183 92-277 664-890 (1249)
97 4a11_B DNA excision repair pro 99.8 1.1E-20 3.7E-25 162.1 14.6 162 99-277 18-194 (408)
98 3zwl_B Eukaryotic translation 99.8 6E-19 2.1E-23 149.0 25.1 155 104-278 142-324 (369)
99 3odt_A Protein DOA1; ubiquitin 99.8 1.9E-19 6.4E-24 149.0 21.1 173 100-277 35-233 (313)
100 3odt_A Protein DOA1; ubiquitin 99.8 2E-19 6.8E-24 148.8 20.5 154 100-277 120-274 (313)
101 2j04_A TAU60, YPL007P, hypothe 99.8 7.4E-20 2.5E-24 161.1 18.4 166 92-277 92-273 (588)
102 4a11_B DNA excision repair pro 99.8 1.7E-19 6E-24 154.5 20.4 168 100-267 162-374 (408)
103 3dw8_B Serine/threonine-protei 99.8 3.4E-20 1.2E-24 161.3 16.2 141 120-270 173-328 (447)
104 1yfq_A Cell cycle arrest prote 99.8 1.2E-19 4.1E-24 152.3 18.9 162 100-276 118-301 (342)
105 1p22_A F-BOX/WD-repeat protein 99.8 2.1E-19 7.3E-24 156.5 20.4 155 100-276 189-343 (435)
106 3v7d_B Cell division control p 99.8 1.4E-19 4.7E-24 158.6 19.3 155 100-277 286-441 (464)
107 1sq9_A Antiviral protein SKI8; 99.8 5.4E-20 1.9E-24 157.6 16.2 168 100-277 32-241 (397)
108 3vu4_A KMHSV2; beta-propeller 99.8 1.1E-19 3.8E-24 154.3 17.7 154 101-258 156-336 (355)
109 3lrv_A PRE-mRNA-splicing facto 99.8 4.8E-20 1.6E-24 155.6 15.2 157 100-278 54-223 (343)
110 4gga_A P55CDC, cell division c 99.8 5.6E-20 1.9E-24 159.5 15.9 171 100-270 205-407 (420)
111 1p22_A F-BOX/WD-repeat protein 99.8 4.4E-19 1.5E-23 154.5 21.1 155 100-276 149-303 (435)
112 2oit_A Nucleoporin 214KDA; NH2 99.8 5.2E-20 1.8E-24 160.5 14.5 131 122-269 90-233 (434)
113 2oaj_A Protein SNI1; WD40 repe 99.8 1.5E-19 5.2E-24 170.7 18.5 136 120-277 13-159 (902)
114 3jro_A Fusion protein of prote 99.8 2.1E-19 7.2E-24 167.0 18.3 145 118-277 3-153 (753)
115 2w18_A PALB2, fancn, partner a 99.8 1.5E-19 5E-24 150.1 15.3 139 100-256 199-355 (356)
116 1yfq_A Cell cycle arrest prote 99.8 1.7E-19 6E-24 151.3 15.0 173 100-277 29-259 (342)
117 4ggc_A P55CDC, cell division c 99.8 1.6E-18 5.4E-23 143.8 20.6 164 111-277 8-204 (318)
118 1pgu_A Actin interacting prote 99.8 1.5E-18 5.2E-23 156.6 21.6 147 105-269 143-294 (615)
119 3i2n_A WD repeat-containing pr 99.8 5.1E-19 1.7E-23 149.1 17.2 159 103-277 43-217 (357)
120 2ovr_B FBW7, F-BOX/WD repeat p 99.8 1.7E-18 5.8E-23 151.1 20.9 167 100-275 135-325 (445)
121 4gq1_A NUP37; propeller, trans 99.8 3.1E-19 1.1E-23 153.6 14.3 178 100-278 162-368 (393)
122 3vu4_A KMHSV2; beta-propeller 99.8 2E-18 6.7E-23 146.6 18.2 147 94-259 109-272 (355)
123 2ovr_B FBW7, F-BOX/WD repeat p 99.8 6.8E-18 2.3E-22 147.2 20.0 166 100-274 175-364 (445)
124 1l0q_A Surface layer protein; 99.8 1.6E-16 5.6E-21 135.8 21.6 154 100-276 8-164 (391)
125 2hqs_A Protein TOLB; TOLB, PAL 99.7 2.1E-16 7E-21 137.0 21.6 150 104-276 159-317 (415)
126 1l0q_A Surface layer protein; 99.7 5.6E-16 1.9E-20 132.5 22.9 178 92-275 38-249 (391)
127 2hqs_A Protein TOLB; TOLB, PAL 99.7 5.6E-16 1.9E-20 134.2 21.5 180 92-278 185-406 (415)
128 3bws_A Protein LP49; two-domai 99.7 2.3E-16 7.9E-21 136.7 18.5 164 92-276 129-309 (433)
129 3bws_A Protein LP49; two-domai 99.7 1.3E-15 4.4E-20 132.0 22.4 163 93-277 177-352 (433)
130 2oit_A Nucleoporin 214KDA; NH2 99.7 3.9E-16 1.3E-20 136.0 16.0 155 92-259 99-279 (434)
131 1xfd_A DIP, dipeptidyl aminope 99.7 1.1E-15 3.6E-20 141.1 15.3 174 91-268 22-247 (723)
132 1nir_A Nitrite reductase; hemo 99.6 5.4E-14 1.8E-18 125.8 21.2 170 93-267 145-364 (543)
133 2ojh_A Uncharacterized protein 99.6 1E-13 3.4E-18 113.1 16.6 154 101-277 19-180 (297)
134 2ojh_A Uncharacterized protein 99.6 1.7E-13 5.8E-18 111.7 17.9 166 91-276 90-278 (297)
135 2ecf_A Dipeptidyl peptidase IV 99.6 4.2E-14 1.4E-18 130.9 14.6 141 126-275 110-292 (741)
136 1z68_A Fibroblast activation p 99.6 4.3E-15 1.5E-19 137.1 7.9 150 92-248 22-189 (719)
137 3scy_A Hypothetical bacterial 99.5 9.6E-13 3.3E-17 111.3 20.9 172 91-277 160-359 (361)
138 2z3z_A Dipeptidyl aminopeptida 99.5 2E-13 6.9E-18 125.7 16.4 171 91-274 126-359 (706)
139 1ri6_A Putative isomerase YBHE 99.5 2E-12 6.7E-17 107.9 20.3 174 92-275 90-282 (343)
140 2ecf_A Dipeptidyl peptidase IV 99.5 3.8E-13 1.3E-17 124.4 17.2 126 124-269 36-192 (741)
141 1ri6_A Putative isomerase YBHE 99.5 9.9E-13 3.4E-17 109.8 17.6 145 101-261 12-164 (343)
142 1k32_A Tricorn protease; prote 99.5 2.4E-13 8.3E-18 130.6 15.6 162 93-277 303-479 (1045)
143 3vgz_A Uncharacterized protein 99.5 2.8E-12 9.6E-17 107.6 20.2 151 103-268 110-272 (353)
144 3u4y_A Uncharacterized protein 99.5 2.3E-12 7.9E-17 107.4 19.6 164 101-268 17-220 (331)
145 1pby_B Quinohemoprotein amine 99.5 8.9E-13 3E-17 109.8 16.8 145 103-269 114-321 (337)
146 3vgz_A Uncharacterized protein 99.5 2.1E-12 7.2E-17 108.4 19.2 154 103-275 163-319 (353)
147 3o4h_A Acylamino-acid-releasin 99.5 1.3E-13 4.5E-18 124.2 12.3 136 102-263 130-279 (582)
148 2z3z_A Dipeptidyl aminopeptida 99.5 3.3E-13 1.1E-17 124.2 14.9 155 92-265 88-300 (706)
149 3hfq_A Uncharacterized protein 99.5 7E-12 2.4E-16 105.3 20.8 177 92-276 92-292 (347)
150 1nir_A Nitrite reductase; hemo 99.5 1.9E-12 6.6E-17 115.7 16.8 116 131-267 144-266 (543)
151 1pby_B Quinohemoprotein amine 99.4 2.5E-12 8.4E-17 107.1 14.9 149 101-269 8-174 (337)
152 4a5s_A Dipeptidyl peptidase 4 99.4 1.1E-12 3.6E-17 121.7 13.4 148 92-246 23-189 (740)
153 1xfd_A DIP, dipeptidyl aminope 99.4 1.6E-13 5.6E-18 126.5 7.9 127 125-270 17-155 (723)
154 1k32_A Tricorn protease; prote 99.4 1.3E-12 4.3E-17 125.6 14.3 132 123-277 294-428 (1045)
155 1jmx_B Amine dehydrogenase; ox 99.4 1.2E-11 4.1E-16 103.5 18.6 143 104-268 125-335 (349)
156 3u4y_A Uncharacterized protein 99.4 2E-11 6.9E-16 101.7 18.6 158 92-267 90-263 (331)
157 3hfq_A Uncharacterized protein 99.4 3.7E-11 1.3E-15 100.9 20.1 153 92-258 46-218 (347)
158 3o4h_A Acylamino-acid-releasin 99.4 5.3E-12 1.8E-16 113.7 15.5 125 126-274 111-242 (582)
159 3scy_A Hypothetical bacterial 99.4 6.1E-11 2.1E-15 100.2 20.9 133 124-267 154-304 (361)
160 1jmx_B Amine dehydrogenase; ox 99.4 5.6E-12 1.9E-16 105.5 14.1 150 101-268 18-185 (349)
161 3azo_A Aminopeptidase; POP fam 99.4 6.7E-12 2.3E-16 114.6 15.4 133 115-267 115-283 (662)
162 1jof_A Carboxy-CIS,CIS-muconat 99.4 1.3E-10 4.4E-15 98.6 22.3 154 102-262 117-296 (365)
163 1xip_A Nucleoporin NUP159; bet 99.3 6.7E-11 2.3E-15 100.6 17.0 147 100-277 54-221 (388)
164 3azo_A Aminopeptidase; POP fam 99.3 3.2E-11 1.1E-15 110.2 15.6 147 117-275 179-341 (662)
165 4a5s_A Dipeptidyl peptidase 4 99.3 1.7E-11 5.6E-16 113.7 12.3 116 125-263 17-146 (740)
166 1z68_A Fibroblast activation p 99.3 6.6E-12 2.3E-16 115.8 9.6 114 129-264 20-145 (719)
167 3pe7_A Oligogalacturonate lyas 99.3 2.3E-10 7.8E-15 97.4 16.8 139 118-276 24-194 (388)
168 1jof_A Carboxy-CIS,CIS-muconat 99.3 3.5E-10 1.2E-14 95.9 17.7 155 92-259 151-342 (365)
169 2xdw_A Prolyl endopeptidase; a 99.2 2.3E-10 8E-15 105.5 16.3 137 122-274 122-291 (710)
170 2bkl_A Prolyl endopeptidase; m 99.2 2.5E-10 8.6E-15 105.0 12.9 136 122-274 118-276 (695)
171 3pe7_A Oligogalacturonate lyas 99.2 1.2E-09 4.1E-14 92.9 16.1 151 91-261 41-228 (388)
172 2oiz_A Aromatic amine dehydrog 99.1 7.4E-09 2.5E-13 87.7 18.3 101 103-205 30-145 (361)
173 1q7f_A NHL, brain tumor CG1071 99.1 9E-09 3.1E-13 83.8 17.3 120 122-259 161-281 (286)
174 3fvz_A Peptidyl-glycine alpha- 99.1 2.3E-08 7.8E-13 83.5 19.6 138 122-266 88-235 (329)
175 3fvz_A Peptidyl-glycine alpha- 99.0 2.1E-08 7.3E-13 83.7 18.7 140 122-276 140-298 (329)
176 1q7f_A NHL, brain tumor CG1071 99.0 3.2E-08 1.1E-12 80.6 19.1 129 123-269 119-248 (286)
177 3e5z_A Putative gluconolactona 99.0 1.8E-08 6.3E-13 82.5 17.6 127 117-261 61-206 (296)
178 2xdw_A Prolyl endopeptidase; a 99.0 9.4E-09 3.2E-13 94.8 17.2 149 127-275 173-385 (710)
179 3no2_A Uncharacterized protein 99.0 1.9E-08 6.4E-13 82.0 16.9 151 101-268 12-164 (276)
180 2dg1_A DRP35, lactonase; beta 99.0 3.1E-08 1.1E-12 82.4 18.0 126 119-261 39-174 (333)
181 1yr2_A Prolyl oligopeptidase; 99.0 3.7E-09 1.3E-13 98.0 13.4 135 123-274 161-321 (741)
182 2gop_A Trilobed protease; beta 99.0 1.1E-08 3.6E-13 85.7 14.0 99 125-248 59-190 (347)
183 2gop_A Trilobed protease; beta 99.0 2.1E-08 7E-13 83.9 15.6 115 125-267 15-170 (347)
184 1qks_A Cytochrome CD1 nitrite 99.0 1.2E-07 4.1E-12 85.0 21.2 160 103-267 176-382 (567)
185 3c5m_A Oligogalacturonate lyas 99.0 1.5E-09 5E-14 92.4 8.5 140 127-275 38-193 (396)
186 2dg1_A DRP35, lactonase; beta 99.0 2.4E-07 8.2E-12 77.0 21.5 145 122-268 84-272 (333)
187 3no2_A Uncharacterized protein 98.9 7.1E-08 2.4E-12 78.6 17.7 156 93-268 44-205 (276)
188 2bkl_A Prolyl endopeptidase; m 98.9 2.7E-08 9.1E-13 91.6 16.8 149 92-260 127-306 (695)
189 2oiz_A Aromatic amine dehydrog 98.9 5E-08 1.7E-12 82.6 16.3 126 131-275 206-353 (361)
190 3e5z_A Putative gluconolactona 98.9 6.4E-08 2.2E-12 79.3 16.5 140 118-276 21-178 (296)
191 3c5m_A Oligogalacturonate lyas 98.9 1.8E-08 6.3E-13 85.5 12.9 141 105-269 169-339 (396)
192 3g4e_A Regucalcin; six bladed 98.8 2.4E-06 8.1E-11 70.1 23.2 155 121-277 50-248 (297)
193 1qks_A Cytochrome CD1 nitrite 98.8 1E-07 3.5E-12 85.4 15.3 112 134-266 165-283 (567)
194 3dsm_A Uncharacterized protein 98.8 1.2E-07 4.2E-12 79.0 14.7 123 126-267 173-310 (328)
195 1xip_A Nucleoporin NUP159; bet 98.8 6.7E-08 2.3E-12 82.2 12.9 126 100-244 102-230 (388)
196 1rwi_B Serine/threonine-protei 98.8 2.1E-07 7.3E-12 74.8 14.8 118 124-260 149-266 (270)
197 1rwi_B Serine/threonine-protei 98.7 5.4E-07 1.8E-11 72.4 16.3 119 124-261 107-225 (270)
198 3dsm_A Uncharacterized protein 98.7 7.7E-07 2.6E-11 74.2 17.3 144 104-267 64-221 (328)
199 3iuj_A Prolyl endopeptidase; h 98.7 1.3E-07 4.5E-12 86.9 12.6 135 122-273 126-284 (693)
200 1yr2_A Prolyl oligopeptidase; 98.7 8.8E-07 3E-11 82.0 18.2 128 128-274 212-368 (741)
201 3sjl_D Methylamine dehydrogena 98.7 6.4E-07 2.2E-11 76.0 15.5 123 131-267 39-178 (386)
202 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 3.6E-06 1.2E-10 69.0 17.4 121 122-258 169-299 (314)
203 2z2n_A Virginiamycin B lyase; 98.6 1E-05 3.5E-10 65.6 19.9 122 121-262 11-132 (299)
204 2z2n_A Virginiamycin B lyase; 98.6 1.2E-05 4E-10 65.2 19.8 133 122-275 138-272 (299)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 98.6 6.4E-06 2.2E-10 67.5 17.8 151 123-276 69-274 (314)
206 3dr2_A Exported gluconolactona 98.6 2.9E-06 9.8E-11 69.8 15.4 124 118-260 79-226 (305)
207 3g4e_A Regucalcin; six bladed 98.5 5E-06 1.7E-10 68.1 16.3 123 107-245 131-259 (297)
208 2ghs_A AGR_C_1268P; regucalcin 98.5 2.3E-05 7.8E-10 65.1 20.2 115 123-259 88-213 (326)
209 2mad_H Methylamine dehydrogena 98.5 3.9E-06 1.3E-10 71.3 15.3 120 132-266 28-165 (373)
210 3hrp_A Uncharacterized protein 98.5 2.4E-05 8.1E-10 67.3 20.0 138 130-268 176-363 (409)
211 2mad_H Methylamine dehydrogena 98.5 2E-05 6.8E-10 66.9 18.4 112 129-262 70-199 (373)
212 3dr2_A Exported gluconolactona 98.4 1E-05 3.4E-10 66.5 15.6 129 116-262 36-182 (305)
213 3sjl_D Methylamine dehydrogena 98.4 5.3E-06 1.8E-10 70.4 13.9 78 130-207 83-176 (386)
214 2qc5_A Streptogramin B lactona 98.4 5.8E-05 2E-09 61.1 19.8 121 122-262 17-137 (300)
215 3c75_H MADH, methylamine dehyd 98.4 4.5E-06 1.6E-10 71.9 12.9 120 134-267 82-218 (426)
216 2qc5_A Streptogramin B lactona 98.4 8.2E-05 2.8E-09 60.2 19.6 120 123-262 102-221 (300)
217 2ghs_A AGR_C_1268P; regucalcin 98.3 4.8E-05 1.6E-09 63.1 18.0 134 125-276 134-277 (326)
218 3hrp_A Uncharacterized protein 98.3 1.6E-05 5.6E-10 68.3 14.4 121 124-261 130-252 (409)
219 2qe8_A Uncharacterized protein 98.3 1.7E-05 5.7E-10 66.4 14.0 133 125-268 17-164 (343)
220 3iuj_A Prolyl endopeptidase; h 98.3 2.9E-05 9.8E-10 71.4 16.1 126 128-272 178-330 (693)
221 2qe8_A Uncharacterized protein 98.2 9E-05 3.1E-09 61.9 17.6 134 122-255 64-223 (343)
222 2hz6_A Endoplasmic reticulum t 98.2 2.6E-08 9E-13 84.6 -4.4 141 101-266 16-157 (369)
223 1kb0_A Quinohemoprotein alcoho 98.2 3.4E-05 1.2E-09 70.7 15.7 122 131-269 319-518 (677)
224 2iwa_A Glutamine cyclotransfer 98.2 5.5E-05 1.9E-09 60.8 14.5 119 126-266 22-143 (266)
225 3c75_H MADH, methylamine dehyd 98.2 4.6E-05 1.6E-09 65.6 14.6 119 130-265 270-409 (426)
226 2xe4_A Oligopeptidase B; hydro 98.2 1.4E-05 4.9E-10 74.1 12.2 116 126-259 175-305 (751)
227 3nol_A Glutamine cyclotransfer 98.1 3.4E-05 1.1E-09 61.5 12.0 118 126-267 44-164 (262)
228 2ece_A 462AA long hypothetical 98.1 7.8E-05 2.7E-09 64.1 13.9 137 127-266 190-363 (462)
229 2hz6_A Endoplasmic reticulum t 98.1 4.8E-07 1.6E-11 76.8 0.2 114 135-268 8-121 (369)
230 1yiq_A Quinohemoprotein alcoho 98.1 0.00017 5.9E-09 66.2 16.5 117 135-268 315-515 (689)
231 3nok_A Glutaminyl cyclase; bet 98.0 5.4E-05 1.8E-09 60.4 10.8 118 125-267 55-173 (268)
232 3mbr_X Glutamine cyclotransfer 98.0 0.00019 6.4E-09 56.7 13.8 119 125-267 21-142 (243)
233 1fwx_A Nitrous oxide reductase 98.0 0.00012 4.1E-09 65.1 13.3 135 128-271 198-384 (595)
234 1mda_H Methylamine dehydrogena 97.9 4.2E-05 1.4E-09 64.7 9.2 98 147-258 47-158 (368)
235 1mda_H Methylamine dehydrogena 97.9 0.00016 5.5E-09 61.1 12.7 121 133-271 219-359 (368)
236 2ece_A 462AA long hypothetical 97.9 0.00017 6E-09 61.9 12.9 123 131-267 88-246 (462)
237 3nok_A Glutaminyl cyclase; bet 97.9 0.001 3.5E-08 53.1 16.5 144 103-267 74-219 (268)
238 2iwa_A Glutamine cyclotransfer 97.8 0.0022 7.5E-08 51.4 16.7 120 129-267 70-190 (266)
239 3pbp_A Nucleoporin NUP82; beta 97.7 0.0027 9.1E-08 54.1 16.4 122 125-253 66-207 (452)
240 1npe_A Nidogen, entactin; glyc 97.7 0.012 4.1E-07 46.8 19.9 122 125-267 122-247 (267)
241 1kb0_A Quinohemoprotein alcoho 97.6 0.0022 7.6E-08 58.7 15.9 79 128-207 246-353 (677)
242 2xe4_A Oligopeptidase B; hydro 97.6 0.0015 5E-08 60.7 14.7 74 128-201 224-305 (751)
243 2p4o_A Hypothetical protein; p 97.6 0.0077 2.6E-07 49.1 17.5 115 125-259 32-148 (306)
244 2ad6_A Methanol dehydrogenase 97.6 0.0035 1.2E-07 56.2 16.4 118 134-268 311-504 (571)
245 1npe_A Nidogen, entactin; glyc 97.6 0.019 6.6E-07 45.6 20.3 124 124-266 78-206 (267)
246 3nol_A Glutamine cyclotransfer 97.6 0.0016 5.5E-08 51.8 12.5 124 126-267 86-210 (262)
247 1yiq_A Quinohemoprotein alcoho 97.5 0.0047 1.6E-07 56.7 16.3 76 129-205 239-343 (689)
248 1k3i_A Galactose oxidase precu 97.5 0.0018 6.3E-08 59.0 13.4 120 129-263 190-328 (656)
249 3qqz_A Putative uncharacterize 97.4 0.013 4.3E-07 46.7 16.2 125 120-255 22-150 (255)
250 1fwx_A Nitrous oxide reductase 97.4 0.004 1.4E-07 55.4 14.2 114 125-259 134-309 (595)
251 1kv9_A Type II quinohemoprotei 97.4 0.008 2.8E-07 54.9 16.8 120 132-268 307-498 (668)
252 1flg_A Protein (quinoprotein e 97.4 0.011 3.8E-07 53.0 17.2 63 190-269 465-527 (582)
253 3mbr_X Glutamine cyclotransfer 97.4 0.0051 1.7E-07 48.5 13.1 117 132-266 70-187 (243)
254 3hxj_A Pyrrolo-quinoline quino 97.3 0.0032 1.1E-07 51.6 11.6 121 120-267 132-252 (330)
255 1w6s_A Methanol dehydrogenase 97.2 0.022 7.5E-07 51.3 17.5 118 134-268 318-513 (599)
256 2fp8_A Strictosidine synthase; 97.2 0.017 5.9E-07 47.3 15.7 123 125-261 19-177 (322)
257 2fp8_A Strictosidine synthase; 97.2 0.011 3.9E-07 48.4 14.4 116 125-258 80-216 (322)
258 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.041 1.4E-06 46.0 17.5 114 135-266 102-215 (376)
259 3q7m_A Lipoprotein YFGL, BAMB; 97.1 0.09 3.1E-06 43.8 21.0 114 135-267 52-171 (376)
260 3tc9_A Hypothetical hydrolase; 97.1 0.026 8.9E-07 48.6 15.8 119 120-257 174-300 (430)
261 3hxj_A Pyrrolo-quinoline quino 97.1 0.0068 2.3E-07 49.5 11.5 114 136-275 107-220 (330)
262 2p9w_A MAL S 1 allergenic prot 97.0 0.015 5.2E-07 47.9 12.9 121 126-258 64-215 (334)
263 3v65_B Low-density lipoprotein 96.8 0.17 5.7E-06 42.8 18.5 125 123-267 200-327 (386)
264 3tc9_A Hypothetical hydrolase; 96.8 0.063 2.1E-06 46.2 15.8 117 125-261 137-260 (430)
265 3v64_C Agrin; beta propeller, 96.8 0.18 6.3E-06 41.9 18.9 125 122-266 156-283 (349)
266 3amr_A 3-phytase; beta-propell 96.7 0.22 7.5E-06 41.4 19.9 124 125-266 128-272 (355)
267 3v64_C Agrin; beta propeller, 96.7 0.22 7.5E-06 41.4 19.2 116 125-259 116-235 (349)
268 1kv9_A Type II quinohemoprotei 96.7 0.034 1.2E-06 50.8 13.8 116 145-267 177-342 (668)
269 4hw6_A Hypothetical protein, I 96.5 0.075 2.6E-06 45.7 14.1 120 120-257 177-303 (433)
270 4a2l_A BT_4663, two-component 96.4 0.57 1.9E-05 43.5 20.5 124 124-262 356-484 (795)
271 3qqz_A Putative uncharacterize 96.4 0.13 4.5E-06 40.8 13.8 125 124-257 120-252 (255)
272 3m0c_C LDL receptor, low-densi 96.3 0.58 2E-05 43.5 19.9 124 120-259 419-547 (791)
273 3p5b_L Low density lipoprotein 96.3 0.41 1.4E-05 40.6 20.0 128 123-268 200-330 (400)
274 2ism_A Putative oxidoreductase 96.2 0.12 4.1E-06 43.1 13.6 113 124-246 30-153 (352)
275 2p9w_A MAL S 1 allergenic prot 96.2 0.16 5.6E-06 41.8 13.8 128 125-257 13-167 (334)
276 1ijq_A LDL receptor, low-densi 96.2 0.4 1.4E-05 39.1 20.2 127 123-267 118-247 (316)
277 3a9g_A Putative uncharacterize 96.2 0.073 2.5E-06 44.5 12.1 112 124-246 28-153 (354)
278 3das_A Putative oxidoreductase 96.1 0.23 7.8E-06 41.3 14.5 121 120-246 27-158 (347)
279 4hw6_A Hypothetical protein, I 96.1 0.33 1.1E-05 41.7 16.1 139 125-267 228-381 (433)
280 4a2l_A BT_4663, two-component 96.0 0.71 2.4E-05 42.8 19.2 124 124-261 405-529 (795)
281 3p5b_L Low density lipoprotein 95.9 0.68 2.3E-05 39.2 19.6 121 120-258 107-234 (400)
282 3sov_A LRP-6, low-density lipo 95.8 0.62 2.1E-05 38.1 19.3 125 122-266 119-246 (318)
283 3v65_B Low-density lipoprotein 95.7 0.81 2.8E-05 38.5 19.3 120 120-258 111-234 (386)
284 3sov_A LRP-6, low-density lipo 95.7 0.72 2.5E-05 37.7 19.5 116 124-258 78-197 (318)
285 1cru_A Protein (soluble quinop 95.6 0.38 1.3E-05 41.6 14.5 113 124-246 26-162 (454)
286 3pbp_A Nucleoporin NUP82; beta 95.6 0.54 1.8E-05 40.1 14.8 122 134-258 30-158 (452)
287 2ad6_A Methanol dehydrogenase 95.6 0.029 1E-06 50.2 7.5 59 145-207 443-501 (571)
288 3kya_A Putative phosphatase; s 95.5 0.33 1.1E-05 42.5 13.6 121 125-257 139-277 (496)
289 3kya_A Putative phosphatase; s 95.5 0.73 2.5E-05 40.3 15.7 123 125-256 186-339 (496)
290 2p4o_A Hypothetical protein; p 95.5 0.79 2.7E-05 37.0 18.8 125 124-258 71-198 (306)
291 3amr_A 3-phytase; beta-propell 95.5 0.39 1.3E-05 39.9 13.2 127 134-276 38-187 (355)
292 1n7d_A LDL receptor, low-densi 95.4 0.058 2E-06 49.5 8.8 125 125-267 496-623 (699)
293 1ijq_A LDL receptor, low-densi 95.3 0.95 3.3E-05 36.8 21.1 117 123-257 28-151 (316)
294 1tl2_A L10, protein (tachylect 95.3 0.14 4.7E-06 39.7 9.2 115 125-255 41-160 (236)
295 3m0c_C LDL receptor, low-densi 95.3 1.9 6.5E-05 40.1 20.4 127 122-266 511-640 (791)
296 1flg_A Protein (quinoprotein e 95.1 0.049 1.7E-06 48.9 7.3 60 145-208 465-524 (582)
297 3v9f_A Two-component system se 94.8 1.5 5.1E-05 40.5 16.8 120 124-261 362-481 (781)
298 2g8s_A Glucose/sorbosone dehyd 94.8 0.69 2.3E-05 38.4 13.2 74 125-200 18-107 (353)
299 3v9f_A Two-component system se 94.7 2.1 7.2E-05 39.5 17.5 119 124-260 494-613 (781)
300 2xbg_A YCF48-like protein; pho 94.5 1.5 5.1E-05 35.8 14.4 116 123-255 203-319 (327)
301 2be1_A Serine/threonine-protei 94.5 0.2 6.8E-06 41.5 8.9 124 137-267 11-139 (339)
302 1w6s_A Methanol dehydrogenase 94.5 0.37 1.3E-05 43.3 11.3 119 136-267 62-200 (599)
303 1n7d_A LDL receptor, low-densi 94.3 0.16 5.5E-06 46.6 8.7 114 126-258 454-571 (699)
304 2wg3_C Hedgehog-interacting pr 93.8 1.2 4.1E-05 38.6 12.7 117 125-247 14-158 (463)
305 3sre_A PON1, serum paraoxonase 93.4 3 0.0001 34.7 14.8 114 126-258 113-252 (355)
306 3sre_A PON1, serum paraoxonase 93.3 2.2 7.6E-05 35.5 13.3 78 120-199 216-297 (355)
307 3s25_A Hypothetical 7-bladed b 93.3 2.7 9.3E-05 34.0 14.0 103 130-261 58-179 (302)
308 4a0p_A LRP6, LRP-6, low-densit 93.3 4.5 0.00015 36.5 20.0 125 122-268 120-247 (628)
309 2xbg_A YCF48-like protein; pho 93.0 3.1 0.00011 33.9 14.3 111 124-255 121-231 (327)
310 1k3i_A Galactose oxidase precu 92.2 0.64 2.2E-05 42.2 9.2 77 173-262 189-278 (656)
311 3s94_A LRP-6, low-density lipo 92.1 6.5 0.00022 35.4 17.7 118 123-259 82-203 (619)
312 2xzh_A Clathrin heavy chain 1; 92.1 4.4 0.00015 33.4 16.6 160 102-272 124-304 (365)
313 4a0p_A LRP6, LRP-6, low-densit 91.7 7.2 0.00025 35.1 19.4 114 125-258 80-197 (628)
314 3sbq_A Nitrous-oxide reductase 91.7 0.93 3.2E-05 40.1 9.0 97 171-271 324-431 (638)
315 3s94_A LRP-6, low-density lipo 91.5 7.7 0.00026 34.9 18.1 118 122-257 37-158 (619)
316 3a9g_A Putative uncharacterize 91.0 4.1 0.00014 33.7 12.3 63 124-188 72-153 (354)
317 1tl2_A L10, protein (tachylect 90.9 1 3.5E-05 34.8 7.6 110 135-258 3-116 (236)
318 2vpj_A Kelch-like protein 12; 90.3 4.9 0.00017 31.9 11.9 108 135-261 159-281 (301)
319 3s25_A Hypothetical 7-bladed b 89.5 2.6 8.8E-05 34.2 9.6 67 131-205 110-181 (302)
320 2xn4_A Kelch-like protein 2; s 89.1 4.9 0.00017 32.0 11.0 109 135-262 155-280 (302)
321 3f7f_A Nucleoporin NUP120; nuc 88.8 3.8 0.00013 37.4 10.7 37 229-267 223-259 (729)
322 3ii7_A Kelch-like protein 7; p 88.3 8.3 0.00028 30.7 11.9 109 135-262 55-182 (306)
323 4gq2_M Nucleoporin NUP120; bet 88.0 15 0.0005 35.0 14.8 38 171-208 237-274 (950)
324 3ei3_A DNA damage-binding prot 87.8 20 0.00068 34.9 15.7 112 133-264 470-597 (1158)
325 1zgk_A Kelch-like ECH-associat 87.5 9.6 0.00033 30.4 14.0 109 135-262 168-291 (308)
326 4gq2_M Nucleoporin NUP120; bet 87.0 1.4 4.7E-05 42.0 7.2 39 228-266 236-274 (950)
327 3sbq_A Nitrous-oxide reductase 86.8 0.59 2E-05 41.3 4.1 70 128-200 326-408 (638)
328 2vpj_A Kelch-like protein 12; 85.9 11 0.00039 29.7 12.6 109 135-262 112-235 (301)
329 1zgk_A Kelch-like ECH-associat 85.8 9.1 0.00031 30.5 10.8 109 135-262 121-244 (308)
330 4asc_A Kelch repeat and BTB do 85.8 12 0.00041 29.9 12.6 112 135-265 148-284 (315)
331 2ism_A Putative oxidoreductase 85.7 5.9 0.0002 32.7 9.7 75 171-259 32-115 (352)
332 1xi4_A Clathrin heavy chain; a 85.6 11 0.00039 37.4 12.5 154 102-264 123-295 (1630)
333 3das_A Putative oxidoreductase 85.5 14 0.00049 30.5 11.8 78 171-258 33-116 (347)
334 1bpo_A Protein (clathrin); cla 84.7 18 0.00063 31.1 20.7 161 102-271 123-302 (494)
335 1cru_A Protein (soluble quinop 84.2 19 0.00066 30.8 13.6 66 124-189 76-163 (454)
336 2xn4_A Kelch-like protein 2; s 83.2 15 0.00052 29.0 11.7 109 135-262 108-233 (302)
337 4fhn_B Nucleoporin NUP120; pro 82.2 1.7 5.7E-05 42.3 5.5 38 229-266 239-276 (1139)
338 3ii7_A Kelch-like protein 7; p 81.4 18 0.00062 28.6 12.8 108 135-261 149-275 (306)
339 2woz_A Kelch repeat and BTB do 80.4 20 0.0007 28.5 12.1 114 134-266 157-295 (318)
340 2zwa_A Leucine carboxyl methyl 79.4 33 0.0011 31.2 12.9 115 134-262 499-639 (695)
341 2zwa_A Leucine carboxyl methyl 78.9 38 0.0013 30.8 14.3 119 129-260 445-579 (695)
342 3zwu_A Alkaline phosphatase PH 76.7 11 0.00039 33.6 8.6 61 125-187 476-548 (592)
343 3zwu_A Alkaline phosphatase PH 75.9 11 0.00038 33.7 8.3 59 172-245 478-548 (592)
344 4asc_A Kelch repeat and BTB do 75.0 30 0.001 27.5 13.3 114 129-261 39-177 (315)
345 4fhn_B Nucleoporin NUP120; pro 73.4 14 0.00047 36.0 9.0 38 171-208 239-276 (1139)
346 2g8s_A Glucose/sorbosone dehyd 72.5 38 0.0013 27.7 11.3 65 124-188 270-341 (353)
347 4a9v_A PHOX; hydrolase, beta-p 72.5 17 0.00059 32.3 8.5 60 171-245 477-548 (592)
348 2uvk_A YJHT; unknown function, 71.9 8.1 0.00028 31.5 6.2 59 192-266 286-350 (357)
349 3ei3_A DNA damage-binding prot 71.7 78 0.0027 30.9 16.1 111 126-256 515-634 (1158)
350 2be1_A Serine/threonine-protei 71.0 16 0.00055 30.1 7.7 28 135-162 110-137 (339)
351 4a9v_A PHOX; hydrolase, beta-p 69.2 32 0.0011 30.6 9.5 63 124-188 475-549 (592)
352 2xzh_A Clathrin heavy chain 1; 66.8 53 0.0018 27.1 14.0 90 119-208 194-298 (365)
353 2uvk_A YJHT; unknown function, 66.3 50 0.0017 26.6 11.2 70 135-207 19-102 (357)
354 2woz_A Kelch repeat and BTB do 63.8 53 0.0018 26.0 15.5 114 130-262 51-188 (318)
355 3f7f_A Nucleoporin NUP120; nuc 61.9 16 0.00054 33.5 6.3 35 126-162 223-257 (729)
356 1olz_A Semaphorin 4D; developm 53.0 1.3E+02 0.0045 27.2 11.1 71 125-195 397-477 (663)
357 1bpo_A Protein (clathrin); cla 50.7 1.2E+02 0.0042 26.1 17.4 91 118-208 192-297 (494)
358 3al9_A Plexin-A2; beta-propell 47.1 50 0.0017 29.1 7.0 74 125-199 400-479 (539)
359 3ott_A Two-component system se 43.9 1.9E+02 0.0064 26.3 16.5 116 124-260 145-262 (758)
360 1xi4_A Clathrin heavy chain; a 43.4 1.7E+02 0.0057 29.6 10.2 90 119-208 193-297 (1630)
361 1q47_A Semaphorin 3A; beta pro 42.0 91 0.0031 27.1 7.7 70 126-195 405-487 (495)
362 4hvt_A Ritya.17583.B, post-pro 38.6 2.3E+02 0.0079 25.8 10.4 33 128-160 132-170 (711)
363 3uc1_A DNA gyrase subunit A; D 35.3 1.8E+02 0.0061 23.6 15.2 125 125-256 95-226 (327)
364 4gz8_A Semaphorin-3A; multi-do 31.9 1.7E+02 0.0059 26.5 8.0 75 125-200 412-499 (667)
365 3ott_A Two-component system se 28.4 3.3E+02 0.011 24.6 16.1 117 125-260 472-588 (758)
366 3q6k_A 43.2 kDa salivary prote 25.8 2.9E+02 0.0098 23.0 14.2 101 147-247 124-243 (381)
367 3nvq_A Semaphorin-7A; beta-pro 25.5 3E+02 0.01 24.5 8.3 69 126-195 363-444 (590)
368 3ol2_B Plexin-B1; beta-propell 25.2 2.2E+02 0.0075 24.9 7.3 74 125-200 387-465 (528)
369 3q6k_A 43.2 kDa salivary prote 24.5 3.1E+02 0.01 22.8 14.3 107 124-246 219-342 (381)
370 3elq_A Arylsulfate sulfotransf 23.3 3.9E+02 0.013 23.7 14.9 140 125-270 207-396 (571)
No 1
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.95 E-value=1.7e-26 Score=193.78 Aligned_cols=167 Identities=19% Similarity=0.248 Sum_probs=146.2
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCC
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (279)
.+++++.+ .+.++.+.+|++........+..|...|.+++|+|++++|++|+.|+.|++||+.+++.+.. +.+|
T Consensus 129 ~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~---~~~h 205 (321)
T 3ow8_A 129 AFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHT---LEGH 205 (321)
T ss_dssp EECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---ECCC
T ss_pred EECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEE---Eccc
Confidence 45666664 45678888998877766677889999999999999999999999999999999999977654 4688
Q ss_pred CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC
Q 023642 169 RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD 248 (279)
Q Consensus 169 ~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d 248 (279)
..+|.+++|+|++++|++++.|+.|++||++++...... . +|...|.+++|+|++++|++++.|
T Consensus 206 ~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~-----------~-----~h~~~v~~~~~sp~~~~l~s~s~D 269 (321)
T 3ow8_A 206 AMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTL-----------S-----GHASWVLNVAFCPDDTHFVSSSSD 269 (321)
T ss_dssp SSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEE-----------C-----CCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEE-----------c-----CCCCceEEEEECCCCCEEEEEeCC
Confidence 889999999999999999999999999999987764322 1 266799999999999999999999
Q ss_pred CeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 249 DCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 249 ~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
++|++||+.+++++.++.+|...|+++..
T Consensus 270 ~~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 298 (321)
T 3ow8_A 270 KSVKVWDVGTRTCVHTFFDHQDQVWGVKY 298 (321)
T ss_dssp SCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CcEEEEeCCCCEEEEEEcCCCCcEEEEEE
Confidence 99999999999999999999999998865
No 2
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.95 E-value=4e-26 Score=193.32 Aligned_cols=169 Identities=12% Similarity=0.104 Sum_probs=139.3
Q ss_pred ccCCCCee--eccccceEeeeeecCCCCce----eeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeec
Q 023642 92 NYSGRGRF--SAADCCHMLSRYLPVNGPWP----VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA 165 (279)
Q Consensus 92 ~~~~~~~~--~~~d~~~~~~~~~~~~~~~~----l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 165 (279)
.+++++.+ .+.|+.+.+|++...+.... +.+|.+.|++++|+|++++|++|+.|++|++||+.+++++.. +
T Consensus 89 ~~s~d~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~---~ 165 (344)
T 4gqb_B 89 TWVGERGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSS---Y 165 (344)
T ss_dssp EEETTTEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---E
T ss_pred EEeCCCeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE---E
Confidence 34556555 56788999999877665433 458999999999999999999999999999999999987664 5
Q ss_pred cCCCcceEEEEECCCCC-EEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC-CCEEE
Q 023642 166 KSLRWTVTDTSLSPDQR-HLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELV 243 (279)
Q Consensus 166 ~~~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~ 243 (279)
.+|...|.+++|+|++. +|++++.|++|++||+++++........ .+...+.+++|+|+ +++|+
T Consensus 166 ~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~--------------~~~~~~~~~~~~p~~~~~l~ 231 (344)
T 4gqb_B 166 RAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCS--------------APGYLPTSLAWHPQQSEVFV 231 (344)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC------------------CCCEEEEEECSSCTTEEE
T ss_pred cCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecc--------------eeeccceeeeecCCCCcceE
Confidence 78999999999999885 7899999999999999988764332110 13347899999995 66889
Q ss_pred EecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 244 AGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 244 t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
+|+.|++|++||+++++++.++.+|...|+++..
T Consensus 232 sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~f 265 (344)
T 4gqb_B 232 FGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVF 265 (344)
T ss_dssp EEETTSEEEEEESCC--CCEEEECCSSCEEEEEE
T ss_pred EeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 9999999999999999999999999999999875
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.95 E-value=9.1e-26 Score=195.53 Aligned_cols=166 Identities=15% Similarity=0.162 Sum_probs=147.7
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
+++++.+ ++.|+.+.+|++........+.+|.+.|.+++|+|++++|++|+.|++|++||+.+++++.. +.+|.
T Consensus 116 ~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~---~~~h~ 192 (410)
T 1vyh_C 116 FHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRT---MHGHD 192 (410)
T ss_dssp ECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEEC---CCCCS
T ss_pred EcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEE---EcCCC
Confidence 5666554 56789999999988888888999999999999999999999999999999999998877654 56899
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC
Q 023642 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249 (279)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~ 249 (279)
..|.+++|+|++.+|++++.|++|++||++++..... +.+ |...|.++.|+|++.+|++++.|+
T Consensus 193 ~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~-----------~~~-----h~~~v~~~~~~~~g~~l~s~s~D~ 256 (410)
T 1vyh_C 193 HNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT-----------FTG-----HREWVRMVRPNQDGTLIASCSNDQ 256 (410)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEE-----------EEC-----CSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE-----------EeC-----CCccEEEEEECCCCCEEEEEcCCC
Confidence 9999999999999999999999999999999876432 222 666999999999999999999999
Q ss_pred eEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 250 CIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 250 ~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
+|++||++++++...+.+|...|+++..
T Consensus 257 ~v~vwd~~~~~~~~~~~~h~~~v~~~~~ 284 (410)
T 1vyh_C 257 TVRVWVVATKECKAELREHRHVVECISW 284 (410)
T ss_dssp CEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred eEEEEECCCCceeeEecCCCceEEEEEE
Confidence 9999999999999999999999988764
No 4
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.95 E-value=1.2e-25 Score=189.93 Aligned_cols=161 Identities=19% Similarity=0.177 Sum_probs=140.3
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
.+.|+.+.+|++........+.+|.+.|.+++|+|++++|++|+.|+.|++||+.++.+... +.+|...|.+++|+|
T Consensus 160 ~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~---~~~h~~~v~~v~~~p 236 (340)
T 1got_B 160 SSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT---FTGHESDINAICFFP 236 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEE---ECCCSSCEEEEEECT
T ss_pred EECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEE---EcCCcCCEEEEEEcC
Confidence 46688899998876666667889999999999999999999999999999999999876654 568888999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
++++|++++.|++|++||+++++........ .+...|.+++|+|+|++|++|+.|+.|++||+.++
T Consensus 237 ~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~--------------~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~ 302 (340)
T 1got_B 237 NGNAFATGSDDATCRLFDLRADQELMTYSHD--------------NIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKA 302 (340)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEECCT--------------TCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTC
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEEEEEccC--------------CcccceEEEEECCCCCEEEEECCCCeEEEEEcccC
Confidence 9999999999999999999987754322110 13347999999999999999999999999999999
Q ss_pred eEEEEEeCCCcceeEEEe
Q 023642 260 KLSLRILAHTVNIALWIT 277 (279)
Q Consensus 260 ~~~~~~~~h~~~v~~v~~ 277 (279)
+.+..+.+|...|+++..
T Consensus 303 ~~~~~~~~h~~~v~~~~~ 320 (340)
T 1got_B 303 DRAGVLAGHDNRVSCLGV 320 (340)
T ss_dssp CEEEEEECCSSCEEEEEE
T ss_pred cEeeEeecCCCcEEEEEE
Confidence 999999999999998865
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=2.2e-25 Score=185.43 Aligned_cols=183 Identities=12% Similarity=0.148 Sum_probs=145.0
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
+++++.+ .+.|+.+.+|++........+.+|.+.|.+++|+|++++|++|+.|++|++||+.++..... .+.+|.
T Consensus 63 ~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~--~~~~h~ 140 (304)
T 2ynn_A 63 FIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQ--TFEGHE 140 (304)
T ss_dssp EEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEE--EECCCC
T ss_pred EeCCCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhh--hhcccC
Confidence 4444443 56788999999877776677899999999999999999999999999999999988754433 356889
Q ss_pred cceEEEEECC-CCCEEEEEeCCCeEEEEECCCCceeeeeccc--cccce----------eEEeeCCC-------------
Q 023642 170 WTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVT--EIHDG----------LDFSAADD------------- 223 (279)
Q Consensus 170 ~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~----------~~~~~~~~------------- 223 (279)
..|.+++|+| ++.+|++++.|++|++||++.+......... ..... +...+..+
T Consensus 141 ~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~ 220 (304)
T 2ynn_A 141 HFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSC 220 (304)
T ss_dssp SCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEE
T ss_pred CcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCcc
Confidence 9999999999 6789999999999999999765532211100 00011 11111111
Q ss_pred ----CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 224 ----GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 224 ----~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.+|...|.+++|+|++++|++++.|++|++||+.+++++.++..|...+.++..
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~ 278 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIAT 278 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEE
T ss_pred ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEE
Confidence 468889999999999999999999999999999999999999999999888763
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.94 E-value=3.8e-25 Score=184.04 Aligned_cols=183 Identities=13% Similarity=0.176 Sum_probs=146.8
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCC
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (279)
.++|++.+ .+.|+.+.+|++........+..|..+|.+++|+|++++|++|+.|++|++||+.+++++.. +.+|
T Consensus 20 ~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~---~~~h 96 (304)
T 2ynn_A 20 DFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD---FEAH 96 (304)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE---EECC
T ss_pred EECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEEE---EeCC
Confidence 45666654 46788999999876665667889999999999999999999999999999999999977654 4689
Q ss_pred CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCcee-e-eeccccccceeEEeeCC-C----------------------
Q 023642 169 RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME-S-LANVTEIHDGLDFSAAD-D---------------------- 223 (279)
Q Consensus 169 ~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~-~-~~~~~~~~~~~~~~~~~-~---------------------- 223 (279)
...|.+++|+|++++|++++.|++|++||++++... . +.........+.|.+.. .
T Consensus 97 ~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~ 176 (304)
T 2ynn_A 97 PDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPN 176 (304)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTSEEEEEETTCSSCS
T ss_pred CCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCcc
Confidence 999999999999999999999999999999876432 1 11111111222333211 1
Q ss_pred ----CCccccEEEEEEec--CCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 224 ----GGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 224 ----~~~~~~v~~~~~sp--~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.+|...+..+.|+| ++++|++++.|++|++||+++++++.++.+|...|.++..
T Consensus 177 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~ 236 (304)
T 2ynn_A 177 FTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236 (304)
T ss_dssp EEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred ceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEE
Confidence 23556788999986 7789999999999999999999999999999999988764
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.94 E-value=1.4e-24 Score=181.87 Aligned_cols=174 Identities=16% Similarity=0.181 Sum_probs=138.5
Q ss_pred eccccceEeeeeecCCC-----CceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEE
Q 023642 100 SAADCCHMLSRYLPVNG-----PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD 174 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~-----~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 174 (279)
.+.|+.+.+|++..... ...+.+|...|.+++|+|++++|++|+.|++|++||+.+++.+.. +.+|...|.+
T Consensus 36 ~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~---~~~h~~~v~~ 112 (319)
T 3frx_A 36 ASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQR---FVGHKSDVMS 112 (319)
T ss_dssp EETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEE
T ss_pred ecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEE---EccCCCcEEE
Confidence 56789999999865332 235789999999999999999999999999999999999977654 4689999999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEE--------------eeCCC-----------------
Q 023642 175 TSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDF--------------SAADD----------------- 223 (279)
Q Consensus 175 ~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~--------------~~~~~----------------- 223 (279)
++|+|++.+|++++.|++|++||++......+.........+.+ .+..+
T Consensus 113 ~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~ 192 (319)
T 3frx_A 113 VDIDKKASMIISGSRDKTIKVWTIKGQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADF 192 (319)
T ss_dssp EEECTTSCEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheee
Confidence 99999999999999999999999976543322211111111111 11111
Q ss_pred CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 224 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 224 ~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.+|...|.+++|+|+|++|++++.|++|++||+.+++++.++..+ ..|.++..
T Consensus 193 ~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~ 245 (319)
T 3frx_A 193 IGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DEVFSLAF 245 (319)
T ss_dssp CCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECC-SCEEEEEE
T ss_pred cCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCC-CcEEEEEE
Confidence 468889999999999999999999999999999999999999865 56776654
No 8
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.94 E-value=2.8e-25 Score=188.15 Aligned_cols=169 Identities=16% Similarity=0.079 Sum_probs=136.3
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeEEeeeeeccC
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKS 167 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 167 (279)
.+++++.+ .+.|+.+.+|++........+.+|.+.|++++|+|++. +|++++.|++|++||+.+++...... ...
T Consensus 134 ~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~-~~~ 212 (344)
T 4gqb_B 134 SVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIG-CSA 212 (344)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----
T ss_pred EECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeee-cce
Confidence 46777765 46788999999877666677899999999999999874 78999999999999999987765532 345
Q ss_pred CCcceEEEEECCC-CCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCC-CEEEEe
Q 023642 168 LRWTVTDTSLSPD-QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAG 245 (279)
Q Consensus 168 ~~~~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g-~~l~t~ 245 (279)
+...+.+++|+|+ +++|++++.|+.|++||+++++.... +. +|...|++++|+|++ ++|++|
T Consensus 213 ~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~-----------~~-----~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 213 PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLS-----------SA-----VHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp -CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEE-----------EE-----CCSSCEEEEEECSSSSCCEEEE
T ss_pred eeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEE-----------Ec-----CCCCCEEEEEEccCCCeEEEEE
Confidence 5567999999995 56889999999999999998876432 22 266699999999997 579999
Q ss_pred cCCCeEEEEECCCCeEEEEEeCCCcceeEEEee
Q 023642 246 SSDDCIYVYDLEANKLSLRILAHTVNIALWITC 278 (279)
Q Consensus 246 s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~~ 278 (279)
+.|++|+|||+.+++++ .+.+|.+.|+++..+
T Consensus 277 s~D~~i~vwd~~~~~~~-~~~~H~~~V~~v~~s 308 (344)
T 4gqb_B 277 SEDCSLAVLDSSLSELF-RSQAHRDFVRDATWS 308 (344)
T ss_dssp ETTSCEEEECTTCCEEE-EECCCSSCEEEEEEC
T ss_pred eCCCeEEEEECCCCcEE-EEcCCCCCEEEEEEe
Confidence 99999999999988764 678999999998753
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.94 E-value=1e-24 Score=184.25 Aligned_cols=178 Identities=15% Similarity=0.201 Sum_probs=148.2
Q ss_pred hhhhccccC-----ccCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC
Q 023642 83 VKMLAGREG-----NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVE 154 (279)
Q Consensus 83 ~~~~~~~~~-----~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~ 154 (279)
.+.+.+|.. .+++++.+ .+.|+.+.+|+.........+..|...|.+++|+|++++|++|+.|+.|++||+.
T Consensus 48 ~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~ 127 (340)
T 1got_B 48 RRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLK 127 (340)
T ss_dssp EEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETT
T ss_pred heeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECc
Confidence 345666654 35677664 5678999999987777677789999999999999999999999999999999998
Q ss_pred CCeE-EeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEE
Q 023642 155 RGWK-IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSL 233 (279)
Q Consensus 155 ~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 233 (279)
++.. ......+.+|.+.|.++.|+|++. +++++.|+.|++||+.+++..... . +|...|.++
T Consensus 128 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~-----------~-----~h~~~v~~~ 190 (340)
T 1got_B 128 TREGNVRVSRELAGHTGYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTF-----------T-----GHTGDVMSL 190 (340)
T ss_dssp TCSBSCEEEEEEECCSSCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEE-----------C-----CCSSCEEEE
T ss_pred cCCCcceeEEEecCCCccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEE-----------c-----CCCCceEEE
Confidence 7531 112223568999999999998875 889999999999999988764322 1 266799999
Q ss_pred EEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 234 KFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 234 ~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
+|+|++++|++|+.|++|++||+++++++.++.+|...|+++..
T Consensus 191 ~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 234 (340)
T 1got_B 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICF 234 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEE
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999998865
No 10
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=1.1e-24 Score=184.56 Aligned_cols=172 Identities=11% Similarity=0.042 Sum_probs=138.6
Q ss_pred ccCCCCee---eccccceEeeeeecCCCC---ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeec
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGP---WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA 165 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~---~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 165 (279)
.+++++.+ .+.|+.+.+|+....... ....+|...|.+++|+|++++|++|+.|+.|++||+..+... ....+
T Consensus 23 ~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~-~~~~~ 101 (345)
T 3fm0_A 23 AWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFE-CVTTL 101 (345)
T ss_dssp EECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EE-EEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeE-EEEEc
Confidence 35666654 467899999998654321 223689999999999999999999999999999999876422 12335
Q ss_pred cCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEe
Q 023642 166 KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG 245 (279)
Q Consensus 166 ~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~ 245 (279)
.+|...|.+++|+|++++|++++.|+.|++||+.++........ +. +|...|.+++|+|++++|+++
T Consensus 102 ~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~--------~~-----~h~~~v~~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 102 EGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSV--------LN-----SHTQDVKHVVWHPSQELLASA 168 (345)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEE--------EC-----CCCSCEEEEEECSSSSCEEEE
T ss_pred cCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEE--------ec-----CcCCCeEEEEECCCCCEEEEE
Confidence 78999999999999999999999999999999987654222111 11 266699999999999999999
Q ss_pred cCCCeEEEEECCCCe--EEEEEeCCCcceeEEEe
Q 023642 246 SSDDCIYVYDLEANK--LSLRILAHTVNIALWIT 277 (279)
Q Consensus 246 s~d~~i~vwd~~~~~--~~~~~~~h~~~v~~v~~ 277 (279)
+.|++|++||+++++ +..++.+|...|+++..
T Consensus 169 s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~ 202 (345)
T 3fm0_A 169 SYDDTVKLYREEEDDWVCCATLEGHESTVWSLAF 202 (345)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred eCCCcEEEEEecCCCEEEEEEecCCCCceEEEEE
Confidence 999999999998875 56789999999998865
No 11
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.93 E-value=1.3e-24 Score=188.29 Aligned_cols=166 Identities=14% Similarity=0.194 Sum_probs=144.1
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
+++++.+ .+.|+.+.+|++........+.+|...|.+++|+|++++|++|+.|++|++||+.++.++.. +.+|.
T Consensus 158 ~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~---~~~h~ 234 (410)
T 1vyh_C 158 FDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKT---FTGHR 234 (410)
T ss_dssp ECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEE---EECCS
T ss_pred EcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE---EeCCC
Confidence 4566654 56788999999866555566889999999999999999999999999999999999987654 46888
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC-----------
Q 023642 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD----------- 238 (279)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~----------- 238 (279)
..|.+++|+|++.+|++++.|+.|++||+.+++...... +|...|.+++|+|+
T Consensus 235 ~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~----------------~h~~~v~~~~~~~~~~~~~~~~~~~ 298 (410)
T 1vyh_C 235 EWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELR----------------EHRHVVECISWAPESSYSSISEATG 298 (410)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEEC----------------CCSSCEEEEEECCSCGGGGGGGCCS
T ss_pred ccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEec----------------CCCceEEEEEEcCcccccchhhhcc
Confidence 899999999999999999999999999999887643221 26668999999996
Q ss_pred ---------CCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 239 ---------GRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 239 ---------g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
|.+|++|+.|++|++||+++++++.++.+|...|+++..
T Consensus 299 ~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~ 346 (410)
T 1vyh_C 299 SETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLF 346 (410)
T ss_dssp CC-------CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred ccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEE
Confidence 678999999999999999999999999999999998864
No 12
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.93 E-value=6e-25 Score=184.35 Aligned_cols=160 Identities=24% Similarity=0.329 Sum_probs=140.7
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
.+.|+.+.+|++........+..|...+.+++|+|++++|++|+.|+.|++||+.++..... +..|...|.+++|+|
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~---~~~~~~~v~~~~~sp 174 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYS---LDTRGKFILSIAYSP 174 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEE---EECSSSCEEEEEECT
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEE---ecCCCceEEEEEECC
Confidence 46789999999877666667889999999999999999999999999999999999876554 356777899999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
++++|++++.|+.|++||+++++...... +|...|.+++|+|++++|++++.|++|++||++++
T Consensus 175 dg~~lasg~~dg~i~iwd~~~~~~~~~~~----------------~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~ 238 (321)
T 3ow8_A 175 DGKYLASGAIDGIINIFDIATGKLLHTLE----------------GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHA 238 (321)
T ss_dssp TSSEEEEEETTSCEEEEETTTTEEEEEEC----------------CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTC
T ss_pred CCCEEEEEcCCCeEEEEECCCCcEEEEEc----------------ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCc
Confidence 99999999999999999999887643221 26668999999999999999999999999999999
Q ss_pred eEEEEEeCCCcceeEEEee
Q 023642 260 KLSLRILAHTVNIALWITC 278 (279)
Q Consensus 260 ~~~~~~~~h~~~v~~v~~~ 278 (279)
+++.++.+|...|.++..+
T Consensus 239 ~~~~~~~~h~~~v~~~~~s 257 (321)
T 3ow8_A 239 NLAGTLSGHASWVLNVAFC 257 (321)
T ss_dssp CEEEEECCCSSCEEEEEEC
T ss_pred ceeEEEcCCCCceEEEEEC
Confidence 9999999999999988653
No 13
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.93 E-value=2.4e-24 Score=183.03 Aligned_cols=161 Identities=17% Similarity=0.194 Sum_probs=139.5
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEE
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~sp--d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (279)
.+.|+.+.+|++........+.+|...|.+++|+| ++++|++|+.|++|++||+.+++++.. +..|...|.+++|
T Consensus 172 ~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~---~~~h~~~v~~v~~ 248 (354)
T 2pbi_B 172 ASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQA---FETHESDVNSVRY 248 (354)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEE
T ss_pred EeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEE---ecCCCCCeEEEEE
Confidence 56788999999877666677899999999999988 578999999999999999999977654 4688899999999
Q ss_pred CCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECC
Q 023642 178 SPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257 (279)
Q Consensus 178 sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~ 257 (279)
+|++.+|++++.|++|++||++.+......... .+...+.+++|+|+|++|++++.|++|++||+.
T Consensus 249 ~p~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~~--------------~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~ 314 (354)
T 2pbi_B 249 YPSGDAFASGSDDATCRLYDLRADREVAIYSKE--------------SIIFGASSVDFSLSGRLLFAGYNDYTINVWDVL 314 (354)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTTEEEEEECCT--------------TCCSCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred eCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCC--------------CcccceeEEEEeCCCCEEEEEECCCcEEEEECC
Confidence 999999999999999999999987654322110 123478999999999999999999999999999
Q ss_pred CCeEEEEEeCCCcceeEEEe
Q 023642 258 ANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 258 ~~~~~~~~~~h~~~v~~v~~ 277 (279)
+++.+..+.+|...|+++..
T Consensus 315 ~~~~~~~l~~h~~~v~~l~~ 334 (354)
T 2pbi_B 315 KGSRVSILFGHENRVSTLRV 334 (354)
T ss_dssp TCSEEEEECCCSSCEEEEEE
T ss_pred CCceEEEEECCCCcEEEEEE
Confidence 99999999999999998865
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.93 E-value=1.2e-24 Score=185.11 Aligned_cols=182 Identities=12% Similarity=0.095 Sum_probs=138.4
Q ss_pred cCCCCee--eccccceEeeeeecCCCC----ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc
Q 023642 93 YSGRGRF--SAADCCHMLSRYLPVNGP----WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK 166 (279)
Q Consensus 93 ~~~~~~~--~~~d~~~~~~~~~~~~~~----~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (279)
+++++.+ .+.|+.+.+|++...+.. ....+|...|++++|+|++++|++|+.|+.|++||+.+++.+.. +.
T Consensus 102 ~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~---~~ 178 (357)
T 4g56_B 102 WVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKS---YN 178 (357)
T ss_dssp EETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEE---EC
T ss_pred EcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEE---Ec
Confidence 5666665 567889999998765433 23458999999999999999999999999999999999977654 56
Q ss_pred CCCcceEEEEECCCCC-EEEEEeCCCeEEEEECCCCceeeeeccc---cccceeEEeeCCC-------------------
Q 023642 167 SLRWTVTDTSLSPDQR-HLVYASMSPIVHIVDVGSGTMESLANVT---EIHDGLDFSAADD------------------- 223 (279)
Q Consensus 167 ~~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~---~~~~~~~~~~~~~------------------- 223 (279)
.|...|.+++|+|++. ++++++.|+.|++||+++++........ .....+.|.+...
T Consensus 179 ~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~ 258 (357)
T 4g56_B 179 AHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN 258 (357)
T ss_dssp CCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC
T ss_pred CCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC
Confidence 8999999999999885 7899999999999999987653322211 1111222322211
Q ss_pred -------CCccccEEEEEEecCC-CEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEee
Q 023642 224 -------GGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWITC 278 (279)
Q Consensus 224 -------~~~~~~v~~~~~sp~g-~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~~ 278 (279)
.+|...|++++|+|++ ++|++++.|++|+|||+++++++..+ +|...|++|..+
T Consensus 259 ~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~vafs 320 (357)
T 4g56_B 259 PDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGVAWS 320 (357)
T ss_dssp GGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEEEEC
T ss_pred CcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEEEEe
Confidence 5688899999999987 57999999999999999999887655 799999998753
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.93 E-value=2.4e-24 Score=182.36 Aligned_cols=172 Identities=15% Similarity=0.161 Sum_probs=138.0
Q ss_pred ccCCCCee---eccccceEeeeeecCCC--CceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNG--PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK 166 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~--~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (279)
.+++++.+ .+.|+.+.+|+...... ...+.+|...|.+++|+|++++|++|+.|++|++||+..+........+.
T Consensus 68 ~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~ 147 (345)
T 3fm0_A 68 AWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN 147 (345)
T ss_dssp EECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC
T ss_pred EECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec
Confidence 35677664 46788999998765432 34578999999999999999999999999999999998775443334467
Q ss_pred CCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec
Q 023642 167 SLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (279)
Q Consensus 167 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s 246 (279)
.|...|.+++|+|++++|++++.|+.|++||..++....... +. +|...|++++|+|+|++|++++
T Consensus 148 ~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~---------~~-----~h~~~v~~l~~sp~g~~l~s~s 213 (345)
T 3fm0_A 148 SHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCAT---------LE-----GHESTVWSLAFDPSGQRLASCS 213 (345)
T ss_dssp CCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEE---------EC-----CCSSCEEEEEECTTSSEEEEEE
T ss_pred CcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEE---------ec-----CCCCceEEEEECCCCCEEEEEe
Confidence 899999999999999999999999999999998776432221 11 2667999999999999999999
Q ss_pred CCCeEEEEECCC---------------CeEEEEEeC-CCcceeEEEe
Q 023642 247 SDDCIYVYDLEA---------------NKLSLRILA-HTVNIALWIT 277 (279)
Q Consensus 247 ~d~~i~vwd~~~---------------~~~~~~~~~-h~~~v~~v~~ 277 (279)
.|++|++||... .+++.++.+ |...|+++..
T Consensus 214 ~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 260 (345)
T 3fm0_A 214 DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAW 260 (345)
T ss_dssp TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEE
T ss_pred CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEE
Confidence 999999999632 245667766 8888887764
No 16
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.9e-24 Score=181.83 Aligned_cols=172 Identities=13% Similarity=0.101 Sum_probs=129.4
Q ss_pred ccCCCCee---eccccceEeeeeecCC-------CCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-CeEEe
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVN-------GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER-GWKIQ 160 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~-------~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~-~~~~~ 160 (279)
.+++++.+ .+.|+.+.+|+..... ....+.+|...|.+++|+|++++|++|+.|++|++||+.. +....
T Consensus 65 ~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~ 144 (330)
T 2hes_X 65 AWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYE 144 (330)
T ss_dssp EECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCE
T ss_pred EECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeE
Confidence 35666654 4678999999874321 1234789999999999999999999999999999999953 22222
Q ss_pred eeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC--
Q 023642 161 KDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-- 238 (279)
Q Consensus 161 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-- 238 (279)
....+.+|...|.+++|+|++.+|++++.|++|++||..++....... +. +|...|.+++|+|+
T Consensus 145 ~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~---------~~-----~h~~~v~~~~~~~~~~ 210 (330)
T 2hes_X 145 CISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAV---------LN-----GHEGTVWSSDFDKTEG 210 (330)
T ss_dssp EEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEE---------EC-----CCSSCEEEEEECCSSS
T ss_pred EEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEE---------cc-----CCCCcEEEEEecCCCC
Confidence 223357899999999999999999999999999999987764222211 11 26679999999998
Q ss_pred CCEEEEecCCCeEEEEECCCC--------eEEEEEeC-CCcceeEEEe
Q 023642 239 GRELVAGSSDDCIYVYDLEAN--------KLSLRILA-HTVNIALWIT 277 (279)
Q Consensus 239 g~~l~t~s~d~~i~vwd~~~~--------~~~~~~~~-h~~~v~~v~~ 277 (279)
+.+|++++.|++|++||+.++ .+...+.+ |...|.++..
T Consensus 211 ~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~ 258 (330)
T 2hes_X 211 VFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAW 258 (330)
T ss_dssp SCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEE
T ss_pred eeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEE
Confidence 778999999999999999765 56667765 8899988764
No 17
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=1.1e-23 Score=181.40 Aligned_cols=183 Identities=19% Similarity=0.257 Sum_probs=137.9
Q ss_pred ccCCCCee--eccccceEeeeeecCCCCceeeCC------------------CCCeEEEEECCCCCEEEEEeCCCcEEEE
Q 023642 92 NYSGRGRF--SAADCCHMLSRYLPVNGPWPVDQT------------------TSRAYVSQFSADGSLFVAGFQASQIRIY 151 (279)
Q Consensus 92 ~~~~~~~~--~~~d~~~~~~~~~~~~~~~~l~~h------------------~~~V~~~~~spd~~~l~s~~~d~~i~iw 151 (279)
.++++|.+ .+.++.+.+|+.........+..| ...|.+++|+|++++|++|+.|+.|++|
T Consensus 71 ~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iw 150 (393)
T 1erj_A 71 KFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIW 150 (393)
T ss_dssp EECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEE
Confidence 46777775 345677888876554433334333 2359999999999999999999999999
Q ss_pred EcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEee-CCC-------
Q 023642 152 DVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSA-ADD------- 223 (279)
Q Consensus 152 d~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~~------- 223 (279)
|+.+++.+.. +.+|...|.+++|+|++++|++++.|++|++||+++++.............+.+.+ ++.
T Consensus 151 d~~~~~~~~~---~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~ 227 (393)
T 1erj_A 151 DIENRKIVMI---LQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSL 227 (393)
T ss_dssp ETTTTEEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTTCCEEEEEET
T ss_pred ECCCCcEEEE---EccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCCCCEEEEEcC
Confidence 9999876554 56899999999999999999999999999999999887643332221111111211 100
Q ss_pred -------------------------CCccccEEEEEEecCCCEEEEecCCCeEEEEECCC------------CeEEEEEe
Q 023642 224 -------------------------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA------------NKLSLRIL 266 (279)
Q Consensus 224 -------------------------~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~------------~~~~~~~~ 266 (279)
.+|...|.+++|+|+|++|++++.|++|++||+++ +.+...+.
T Consensus 228 d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~ 307 (393)
T 1erj_A 228 DRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI 307 (393)
T ss_dssp TSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEE
T ss_pred CCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEe
Confidence 35788999999999999999999999999999975 34677888
Q ss_pred CCCcceeEEEe
Q 023642 267 AHTVNIALWIT 277 (279)
Q Consensus 267 ~h~~~v~~v~~ 277 (279)
+|...|.++..
T Consensus 308 ~h~~~v~~~~~ 318 (393)
T 1erj_A 308 GHKDFVLSVAT 318 (393)
T ss_dssp CCSSCEEEEEE
T ss_pred cccCcEEEEEE
Confidence 99999988764
No 18
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.93 E-value=7e-24 Score=182.60 Aligned_cols=183 Identities=17% Similarity=0.205 Sum_probs=146.0
Q ss_pred CccCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccC
Q 023642 91 GNYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS 167 (279)
Q Consensus 91 ~~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 167 (279)
..+++++.+ .+.|+.+.+|++........+.+|...|++++|+|++++|++++.|++|++||+.++++.... .
T Consensus 129 v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~----~ 204 (393)
T 1erj_A 129 VCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTL----S 204 (393)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE----E
T ss_pred EEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEE----E
Confidence 346677665 467889999998766555668999999999999999999999999999999999999765542 3
Q ss_pred CCcceEEEEECC-CCCEEEEEeCCCeEEEEECCCCceeeeec--------cccccceeEEeeCCC---------------
Q 023642 168 LRWTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLAN--------VTEIHDGLDFSAADD--------------- 223 (279)
Q Consensus 168 ~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------~~~~~~~~~~~~~~~--------------- 223 (279)
+...+.+++|+| ++++|++++.|+.|++||++++....... .......+.|.+++.
T Consensus 205 ~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd 284 (393)
T 1erj_A 205 IEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWN 284 (393)
T ss_dssp CSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred cCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCEEEEEE
Confidence 455799999999 89999999999999999998876533221 000111122222111
Q ss_pred ----------------------CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 224 ----------------------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 224 ----------------------~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.+|...|.+++|+|++++|++++.|+.|++||+.+++++..+.+|...|.++..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~ 360 (393)
T 1erj_A 285 LQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAV 360 (393)
T ss_dssp C---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred CCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEe
Confidence 247778999999999999999999999999999999999999999999988764
No 19
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.93 E-value=6.4e-24 Score=176.03 Aligned_cols=171 Identities=13% Similarity=0.131 Sum_probs=136.6
Q ss_pred ccCCCCee---eccccceEeeeeecC--CCCceeeCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEcCCCeEEeeeee
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPV--NGPWPVDQTTSRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDIL 164 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~--~~~~~l~~h~~~V~~~~~spd--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 164 (279)
.++++|.+ .+.|+.+.+|++... .....+.+|.+.|++++|+|+ +++|++|+.|++|++||+.++... ....
T Consensus 16 ~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~-~~~~ 94 (297)
T 2pm7_B 16 VMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWS-QIAV 94 (297)
T ss_dssp EECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBC-CCEE
T ss_pred EECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceE-EEEE
Confidence 35566654 467899999998643 344668999999999999874 899999999999999999877421 1123
Q ss_pred ccCCCcceEEEEECCC--CCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC----
Q 023642 165 AKSLRWTVTDTSLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---- 238 (279)
Q Consensus 165 ~~~~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---- 238 (279)
...|...|.+++|+|+ +.+|++++.|+.|++||++++...... .+. +|...|.+++|+|+
T Consensus 95 ~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~---------~~~-----~h~~~v~~~~~~p~~~~~ 160 (297)
T 2pm7_B 95 HAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPI---------IID-----AHAIGVNSASWAPATIEE 160 (297)
T ss_dssp ECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCE---------EEE-----CCSSCEEEEEECCCC---
T ss_pred eecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeee---------eee-----cccCccceEeecCCcccc
Confidence 4678889999999998 899999999999999999876421110 122 26668999999997
Q ss_pred ---------CCEEEEecCCCeEEEEECCCCe----EEEEEeCCCcceeEEEe
Q 023642 239 ---------GRELVAGSSDDCIYVYDLEANK----LSLRILAHTVNIALWIT 277 (279)
Q Consensus 239 ---------g~~l~t~s~d~~i~vwd~~~~~----~~~~~~~h~~~v~~v~~ 277 (279)
+++|++|+.|++|++||+++++ ...++.+|...|+++..
T Consensus 161 ~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp ---------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred cccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 5799999999999999998765 67889999999998875
No 20
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5.2e-24 Score=179.23 Aligned_cols=165 Identities=13% Similarity=0.028 Sum_probs=125.3
Q ss_pred eccccceEeeeeecCCCC--cee-eC-CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCe----EEeeeeeccCCCcc
Q 023642 100 SAADCCHMLSRYLPVNGP--WPV-DQ-TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW----KIQKDILAKSLRWT 171 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~--~~l-~~-h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~----~~~~~~~~~~~~~~ 171 (279)
.+.|+.+.+|++...... ..+ .+ |...|.+++|+|++++|++|+.|++|++||+.... .......+.+|...
T Consensus 30 ~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~ 109 (330)
T 2hes_X 30 GSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENE 109 (330)
T ss_dssp EESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----C
T ss_pred EcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCc
Confidence 467889999987653221 223 34 99999999999999999999999999999985421 01122235789999
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCC-ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCe
Q 023642 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (279)
Q Consensus 172 v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~ 250 (279)
|.+++|+|++++|++++.|++|++||+... ....... .+. +|...|.+++|+|++.+|++++.|++
T Consensus 110 V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~--------~~~-----~h~~~v~~v~~~p~~~~l~s~s~D~~ 176 (330)
T 2hes_X 110 VKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECIS--------VLQ-----EHSQDVKHVIWHPSEALLASSSYDDT 176 (330)
T ss_dssp EEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEE--------EEC-----CCSSCEEEEEECSSSSEEEEEETTSC
T ss_pred EEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEE--------Eec-----cCCCceEEEEECCCCCEEEEEcCCCe
Confidence 999999999999999999999999999543 2111111 111 26679999999999999999999999
Q ss_pred EEEEECCCC--eEEEEEeCCCcceeEEEe
Q 023642 251 IYVYDLEAN--KLSLRILAHTVNIALWIT 277 (279)
Q Consensus 251 i~vwd~~~~--~~~~~~~~h~~~v~~v~~ 277 (279)
|++||+.++ +++..+.+|...|+++..
T Consensus 177 i~iW~~~~~~~~~~~~~~~h~~~v~~~~~ 205 (330)
T 2hes_X 177 VRIWKDYDDDWECVAVLNGHEGTVWSSDF 205 (330)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEE
T ss_pred EEEEECCCCCeeEEEEccCCCCcEEEEEe
Confidence 999999876 688999999999988754
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.93 E-value=1.5e-23 Score=174.59 Aligned_cols=165 Identities=19% Similarity=0.209 Sum_probs=140.3
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
+++++.+ .+.|+.+.+|+.........+.+|...|.+++|+|++++|++|+.|+.|++||+.+++++.. +.+|.
T Consensus 31 ~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~---~~~~~ 107 (312)
T 4ery_A 31 FSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKT---LKGHS 107 (312)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEE---EECCS
T ss_pred ECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEE---EcCCC
Confidence 5666654 46788999999877666667899999999999999999999999999999999999877654 46788
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC
Q 023642 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249 (279)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~ 249 (279)
..|.+++|+|++++|++++.|+.|++||+++++...... .|...|.+++|+|++++|++++.|+
T Consensus 108 ~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~----------------~~~~~v~~~~~~~~~~~l~~~~~d~ 171 (312)
T 4ery_A 108 NYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP----------------AHSDPVSAVHFNRDGSLIVSSSYDG 171 (312)
T ss_dssp SCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC----------------CCSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec----------------CCCCcEEEEEEcCCCCEEEEEeCCC
Confidence 899999999999999999999999999999887643221 1556899999999999999999999
Q ss_pred eEEEEECCCCeEEEEEe-CCCcceeEEE
Q 023642 250 CIYVYDLEANKLSLRIL-AHTVNIALWI 276 (279)
Q Consensus 250 ~i~vwd~~~~~~~~~~~-~h~~~v~~v~ 276 (279)
.|++||+++++++..+. .+...+.++.
T Consensus 172 ~i~~wd~~~~~~~~~~~~~~~~~~~~~~ 199 (312)
T 4ery_A 172 LCRIWDTASGQCLKTLIDDDNPPVSFVK 199 (312)
T ss_dssp CEEEEETTTCCEEEEECCSSCCCEEEEE
T ss_pred cEEEEECCCCceeeEEeccCCCceEEEE
Confidence 99999999999888875 4555666554
No 22
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.92 E-value=7.6e-24 Score=192.45 Aligned_cols=186 Identities=19% Similarity=0.164 Sum_probs=144.2
Q ss_pred ccCCCCe--e--eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeee---
Q 023642 92 NYSGRGR--F--SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDIL--- 164 (279)
Q Consensus 92 ~~~~~~~--~--~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--- 164 (279)
.|++++. + .+.|+.+.+|+..+......+.+|.+.|.+++|+||+++|++|+.|++|++||+.++++......
T Consensus 154 ~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~ 233 (611)
T 1nr0_A 154 DFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSL 233 (611)
T ss_dssp EECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTS
T ss_pred EECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccc
Confidence 3566653 3 56788999998655544556889999999999999999999999999999999998876654211
Q ss_pred -ccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccc----eeEE-----------------eeC-
Q 023642 165 -AKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD----GLDF-----------------SAA- 221 (279)
Q Consensus 165 -~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~----~~~~-----------------~~~- 221 (279)
..+|.+.|.+++|+|++++|++++.|++|++||+.+++............ .+.+ ...
T Consensus 234 ~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~ 313 (611)
T 1nr0_A 234 KNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPEL 313 (611)
T ss_dssp SSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTT
T ss_pred cccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCC
Confidence 11789999999999999999999999999999999887643322111000 0000 000
Q ss_pred -----CCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEE-eCCCcceeEEEe
Q 023642 222 -----DDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI-LAHTVNIALWIT 277 (279)
Q Consensus 222 -----~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~-~~h~~~v~~v~~ 277 (279)
...+|...|.+++|+|+|++|++++.|++|++||+.++++...+ .+|...|.++..
T Consensus 314 ~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~ 375 (611)
T 1nr0_A 314 GSIDQVRYGHNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKT 375 (611)
T ss_dssp TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEE
T ss_pred CCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCCcEEEEECCCCceeeecccCCcceEEEEEE
Confidence 00357889999999999999999999999999999999887776 578888887653
No 23
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.92 E-value=1.1e-23 Score=178.95 Aligned_cols=180 Identities=16% Similarity=0.201 Sum_probs=148.3
Q ss_pred hhhhhccccCc-----cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc
Q 023642 82 TVKMLAGREGN-----YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDV 153 (279)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~ 153 (279)
....+.+|... +++++.+ .+.|+.+.+|+..+......+..|...|.+++|+|++.+|++|+.|+.+++|++
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 34556666653 5666654 577999999998777777778899999999999999999999999999999998
Q ss_pred CCCeE---EeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccE
Q 023642 154 ERGWK---IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGI 230 (279)
Q Consensus 154 ~~~~~---~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 230 (279)
..... ......+..|...|.+++|+|++..|++++.|++|++||+.+++.... +.+ |...|
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~-----------~~~-----h~~~v 199 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQS-----------FHG-----HGADV 199 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEE-----------EEC-----CSSCE
T ss_pred eccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEE-----------EcC-----CCCCe
Confidence 64311 011122457888999999999999999999999999999999876432 222 56689
Q ss_pred EEEEEec--CCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 231 FSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 231 ~~~~~sp--~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.+++|+| ++.+|++|+.|++|++||+++++++..+.+|...|+++..
T Consensus 200 ~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~ 248 (354)
T 2pbi_B 200 LCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRY 248 (354)
T ss_dssp EEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEE
Confidence 9999987 5789999999999999999999999999999999998865
No 24
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.92 E-value=1e-23 Score=191.66 Aligned_cols=171 Identities=15% Similarity=0.130 Sum_probs=129.9
Q ss_pred ccCCCCee--eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeee-------
Q 023642 92 NYSGRGRF--SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD------- 162 (279)
Q Consensus 92 ~~~~~~~~--~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~------- 162 (279)
.++|+|.+ .+.++.+.+|++........+.+|.+.|++++|+|||++|++|+.|++|+|||+.++......
T Consensus 25 ~~spdg~~l~~~~~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~ 104 (611)
T 1nr0_A 25 GNTPAGDKIQYCNGTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSG 104 (611)
T ss_dssp EECTTSSEEEEEETTEEEEEETTCSSCCEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSS
T ss_pred eeCCCCCEEEeCCCCEEEEecCCCcccCeEecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCC
Confidence 46777754 345678888988766777789999999999999999999999999999999998654221110
Q ss_pred ------------------------------------eeccCCCcceEEEEECCCCC-EEEEEeCCCeEEEEECCCCceee
Q 023642 163 ------------------------------------ILAKSLRWTVTDTSLSPDQR-HLVYASMSPIVHIVDVGSGTMES 205 (279)
Q Consensus 163 ------------------------------------~~~~~~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~~~ 205 (279)
..+.+|...|.+++|+|++. .|++++.|++|++||..+++...
T Consensus 105 ~v~~v~fs~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~ 184 (611)
T 1nr0_A 105 PVKDISWDSESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS 184 (611)
T ss_dssp CEEEEEECTTSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE
T ss_pred ceEEEEECCCCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEee
Confidence 01234555666666666654 36667777777777765544322
Q ss_pred eeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe-------CCCcceeEEEee
Q 023642 206 LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-------AHTVNIALWITC 278 (279)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~-------~h~~~v~~v~~~ 278 (279)
. + .+|...|.+++|+|+|++|++++.|++|++||+.+++++..+. +|...|+++..+
T Consensus 185 ~-----------l-----~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~s 248 (611)
T 1nr0_A 185 T-----------F-----GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWS 248 (611)
T ss_dssp E-----------E-----CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEEC
T ss_pred e-----------e-----ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEEC
Confidence 1 1 2377799999999999999999999999999999999999884 799999988753
No 25
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.92 E-value=2.7e-23 Score=173.01 Aligned_cols=141 Identities=22% Similarity=0.286 Sum_probs=126.2
Q ss_pred ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 023642 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (279)
Q Consensus 118 ~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d 197 (279)
..+.+|...|++++|+|++++|++|+.|+.|++|++.+++.... +.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~---~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd 93 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKT---ISGHKLGISDVAWSSDSNLLVSASDDKTLKIWD 93 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchh---hccCCCceEEEEEcCCCCEEEEECCCCEEEEEE
Confidence 34789999999999999999999999999999999998876554 468888999999999999999999999999999
Q ss_pred CCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
+.+++..... . +|...|.+++|+|++++|++++.|+.|++||+++++++..+.+|...|.++..
T Consensus 94 ~~~~~~~~~~-----------~-----~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 94 VSSGKCLKTL-----------K-----GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp TTTCCEEEEE-----------E-----CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CCCCcEEEEE-----------c-----CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEE
Confidence 9988764322 1 25668999999999999999999999999999999999999999999988764
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.92 E-value=5.3e-23 Score=173.85 Aligned_cols=160 Identities=13% Similarity=0.122 Sum_probs=134.0
Q ss_pred eccccceEeeeeecCCC-------CceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcce
Q 023642 100 SAADCCHMLSRYLPVNG-------PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTV 172 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~-------~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v 172 (279)
.+.|+.+.+|++..... ...+.+|...|.+++|+|++.+|++|+.|++|++||+.+++.+.. +.+|...|
T Consensus 45 gs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~---~~~h~~~v 121 (343)
T 2xzm_R 45 GSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKR---FVGHQSEV 121 (343)
T ss_dssp EETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEE---EECCCSCE
T ss_pred EcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEE---EcCCCCcE
Confidence 56789999999865432 234789999999999999999999999999999999999877654 46899999
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCC----------CEE
Q 023642 173 TDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG----------REL 242 (279)
Q Consensus 173 ~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g----------~~l 242 (279)
.+++|+|++++|++++.|+.|++||+.......... ..+|...|.+++|+|++ .+|
T Consensus 122 ~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~--------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l 187 (343)
T 2xzm_R 122 YSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAE--------------KENHSDWVSCVRYSPIMKSANKVQPFAPYF 187 (343)
T ss_dssp EEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCT--------------TTSCSSCEEEEEECCCCCSCSCCCSSCCEE
T ss_pred EEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeec--------------ccCCCceeeeeeeccccccccccCCCCCEE
Confidence 999999999999999999999999998433221110 11366789999999987 789
Q ss_pred EEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 243 VAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 243 ~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
++++.|++|++|| ..++....+.+|...|+++..
T Consensus 188 ~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~ 221 (343)
T 2xzm_R 188 ASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSI 221 (343)
T ss_dssp EEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEE
T ss_pred EEEcCCCEEEEEc-CCCceeEEEcCccccceEEEE
Confidence 9999999999999 457888899999999998865
No 27
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.92 E-value=2e-24 Score=184.29 Aligned_cols=186 Identities=10% Similarity=0.078 Sum_probs=136.8
Q ss_pred ccCCCCee---eccccceEeeeeecC--CCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPV--NGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK 166 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~--~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (279)
.+++++.+ .+.|+.+.+|++... .....+.+|...|.+++|+|++++|++++.|+.|++||+.++..........
T Consensus 18 ~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~ 97 (377)
T 3dwl_C 18 AFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLL 97 (377)
T ss_dssp EECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECC
T ss_pred EECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEec
Confidence 35555553 346888999999876 5566788999999999999999999999999999999999876222223356
Q ss_pred CCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce----eeeec-cccccceeEEeeCCC----------------C-
Q 023642 167 SLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM----ESLAN-VTEIHDGLDFSAADD----------------G- 224 (279)
Q Consensus 167 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~----~~~~~-~~~~~~~~~~~~~~~----------------~- 224 (279)
.|...|.+++|+|++++|++++.|+.|++||+.+++. ..+.. .......+.|.+++. .
T Consensus 98 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 98 RLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp CCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECC
T ss_pred ccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEe
Confidence 8899999999999999999999999999999988752 22211 111112222222221 0
Q ss_pred -------------------------CccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeE----EEEEeCCCcceeEE
Q 023642 225 -------------------------GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL----SLRILAHTVNIALW 275 (279)
Q Consensus 225 -------------------------~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~----~~~~~~h~~~v~~v 275 (279)
+|...|.+++|+|++++|++++.|++|++||+.+++. +..+.+|...|.++
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~ 257 (377)
T 3dwl_C 178 RDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSL 257 (377)
T ss_dssp SSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEE
T ss_pred cccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEE
Confidence 5778899999999999999999999999999999877 88999999999988
Q ss_pred Ee
Q 023642 276 IT 277 (279)
Q Consensus 276 ~~ 277 (279)
..
T Consensus 258 ~~ 259 (377)
T 3dwl_C 258 LW 259 (377)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 28
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.91 E-value=3.5e-23 Score=176.66 Aligned_cols=173 Identities=18% Similarity=0.218 Sum_probs=136.2
Q ss_pred CccCCCCee-----eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeec
Q 023642 91 GNYSGRGRF-----SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA 165 (279)
Q Consensus 91 ~~~~~~~~~-----~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 165 (279)
..|+|+|++ .+.|+.+.+|+.........+ .|...|.+++|+|||++|++++.+ .+++|+..++..+... ..
T Consensus 139 v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~~-~~ 215 (365)
T 4h5i_A 139 VYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIARK-TD 215 (365)
T ss_dssp EEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEEE-CC
T ss_pred EEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEe-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceeee-ec
Confidence 357888876 124778999987655444444 478889999999999999999854 6778887777655432 34
Q ss_pred cCCCcceEEEEECCCCCEEEEEeCCC----eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCE
Q 023642 166 KSLRWTVTDTSLSPDQRHLVYASMSP----IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRE 241 (279)
Q Consensus 166 ~~~~~~v~~~~~sp~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~ 241 (279)
..|...|.+++|+|+++++++++.|+ .+++||+........... .+.+ |...|++++|+|||++
T Consensus 216 ~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~-------~~~~-----~~~~V~~~~~Spdg~~ 283 (365)
T 4h5i_A 216 FDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSK-------QVTN-----RFKGITSMDVDMKGEL 283 (365)
T ss_dssp CCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEE-------EEES-----SCSCEEEEEECTTSCE
T ss_pred CCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeee-------eecC-----CCCCeEeEEECCCCCc
Confidence 57888999999999999999999887 688999887664322111 1222 5568999999999999
Q ss_pred EEEecCCCeEEEEECCCCeEEEEE-eCCCcceeEEEee
Q 023642 242 LVAGSSDDCIYVYDLEANKLSLRI-LAHTVNIALWITC 278 (279)
Q Consensus 242 l~t~s~d~~i~vwd~~~~~~~~~~-~~h~~~v~~v~~~ 278 (279)
||+|+.|++|+|||+++++++.++ .+|...|++|..+
T Consensus 284 lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fS 321 (365)
T 4h5i_A 284 AVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTIS 321 (365)
T ss_dssp EEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEEC
T ss_pred eEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEEC
Confidence 999999999999999999999986 6999999998753
No 29
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.91 E-value=4.9e-23 Score=176.52 Aligned_cols=166 Identities=17% Similarity=0.195 Sum_probs=135.0
Q ss_pred eccccceEeeeeecCCCCcee-----eCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCC-eEEeeeeeccCCCcce
Q 023642 100 SAADCCHMLSRYLPVNGPWPV-----DQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERG-WKIQKDILAKSLRWTV 172 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l-----~~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~~v 172 (279)
.+.|+.+.+|++........+ .+|...|.+++|+| ++.+|++|+.|++|++||+... ..+. .+.+|...|
T Consensus 176 ~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~---~~~~h~~~v 252 (380)
T 3iz6_a 176 GSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVR---TYHGHEGDI 252 (380)
T ss_dssp ECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCE---EECCCSSCC
T ss_pred ECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceE---EECCcCCCe
Confidence 567889999987665443333 68999999999987 8999999999999999999743 3333 356899999
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEE
Q 023642 173 TDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIY 252 (279)
Q Consensus 173 ~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~ 252 (279)
.+++|+|++++|++++.|++|++||++++.......... .....+...|.+++|+|+|++|++|+.|+.|+
T Consensus 253 ~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~ 323 (380)
T 3iz6_a 253 NSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREP---------DRNDNELPIVTSVAFSISGRLLFAGYSNGDCY 323 (380)
T ss_dssp CEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCC---------SSSCCSSCSCSEEEECSSSSEEEEECTTSCEE
T ss_pred EEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccc---------cccccccCceEEEEECCCCCEEEEEECCCCEE
Confidence 999999999999999999999999999987654322111 00011334689999999999999999999999
Q ss_pred EEECCCCeEEEEE----eCCCcceeEEEe
Q 023642 253 VYDLEANKLSLRI----LAHTVNIALWIT 277 (279)
Q Consensus 253 vwd~~~~~~~~~~----~~h~~~v~~v~~ 277 (279)
+||+.+++.+..+ .+|...|+++..
T Consensus 324 vwd~~~~~~~~~~~~~~~~h~~~v~~l~~ 352 (380)
T 3iz6_a 324 VWDTLLAEMVLNLGTLQNSHEGRISCLGL 352 (380)
T ss_dssp EEETTTCCEEEEECCSCSSCCCCCCEEEE
T ss_pred EEECCCCceEEEEecccCCCCCceEEEEE
Confidence 9999999998888 689999998865
No 30
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=1.2e-22 Score=175.07 Aligned_cols=163 Identities=13% Similarity=0.134 Sum_probs=133.2
Q ss_pred ccccceEeeeeecC----CCCceeeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEE----eeeeeccCCCcc
Q 023642 101 AADCCHMLSRYLPV----NGPWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKI----QKDILAKSLRWT 171 (279)
Q Consensus 101 ~~d~~~~~~~~~~~----~~~~~l~~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~~ 171 (279)
+.++.+.+|++... .....+.+|.+.|++++|+| ++++|++|+.|+.|++||+.++... .....+.+|...
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~ 133 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKR 133 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSC
T ss_pred cCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCe
Confidence 56788999987543 23345789999999999999 9999999999999999999887321 112235688999
Q ss_pred eEEEEECCCC-CEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCe
Q 023642 172 VTDTSLSPDQ-RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDC 250 (279)
Q Consensus 172 v~~~~~sp~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~ 250 (279)
|.+++|+|++ ++|++++.|+.|++||+.+++....... .+|...|.+++|+|++++|++++.|+.
T Consensus 134 v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--------------~~~~~~v~~~~~~~~~~~l~~~~~d~~ 199 (402)
T 2aq5_A 134 VGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGP--------------DVHPDTIYSVDWSRDGALICTSCRDKR 199 (402)
T ss_dssp EEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECT--------------TTCCSCEEEEEECTTSSCEEEEETTSE
T ss_pred EEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEec--------------CCCCCceEEEEECCCCCEEEEEecCCc
Confidence 9999999998 6999999999999999998876433210 026669999999999999999999999
Q ss_pred EEEEECCCCeEEEEE-eCCCcc-eeEEEe
Q 023642 251 IYVYDLEANKLSLRI-LAHTVN-IALWIT 277 (279)
Q Consensus 251 i~vwd~~~~~~~~~~-~~h~~~-v~~v~~ 277 (279)
|++||+++++.+..+ .+|... +.++..
T Consensus 200 i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 228 (402)
T 2aq5_A 200 VRVIEPRKGTVVAEKDRPHEGTRPVHAVF 228 (402)
T ss_dssp EEEEETTTTEEEEEEECSSCSSSCCEEEE
T ss_pred EEEEeCCCCceeeeeccCCCCCcceEEEE
Confidence 999999999999999 788775 665543
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.91 E-value=1.8e-22 Score=169.04 Aligned_cols=142 Identities=16% Similarity=0.169 Sum_probs=120.6
Q ss_pred eeeCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCe--EEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEE
Q 023642 119 PVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGW--KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (279)
Q Consensus 119 ~l~~h~~~V~~~~~spd~-~~l~s~~~d~~i~iwd~~~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i 195 (279)
.+.+|.+.|++++|+|++ ++|++|+.|++|++||+.... .......+.+|...|.+++|+|++++|++++.|++|++
T Consensus 12 ~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~ 91 (319)
T 3frx_A 12 TLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRL 91 (319)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEE
Confidence 578999999999999965 899999999999999986421 11222346789999999999999999999999999999
Q ss_pred EECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEE
Q 023642 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALW 275 (279)
Q Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v 275 (279)
||+.+++.... +. +|...|.+++|+|++.+|++++.|++|++||++ ++++.++.+|...|.++
T Consensus 92 wd~~~~~~~~~-----------~~-----~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~~v~~~ 154 (319)
T 3frx_A 92 WDVATGETYQR-----------FV-----GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK-GQCLATLLGHNDWVSQV 154 (319)
T ss_dssp EETTTTEEEEE-----------EE-----CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEE
T ss_pred EECCCCCeeEE-----------Ec-----cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCCcEEEE
Confidence 99999876432 22 266799999999999999999999999999996 67888999999998876
Q ss_pred Ee
Q 023642 276 IT 277 (279)
Q Consensus 276 ~~ 277 (279)
..
T Consensus 155 ~~ 156 (319)
T 3frx_A 155 RV 156 (319)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 32
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.91 E-value=1.6e-22 Score=186.33 Aligned_cols=162 Identities=17% Similarity=0.214 Sum_probs=138.1
Q ss_pred eccccceEeeeeecCCCC-----ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEE
Q 023642 100 SAADCCHMLSRYLPVNGP-----WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTD 174 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~-----~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~ 174 (279)
.+.|+.+.+|++...... ..+.+|...|.+++|+|++++|++|+.|++|++||+.++..... +.+|...|.+
T Consensus 401 ~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~---~~~h~~~v~~ 477 (694)
T 3dm0_A 401 ASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRR---FVGHTKDVLS 477 (694)
T ss_dssp EETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEE
T ss_pred EeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeE---EeCCCCCEEE
Confidence 567899999998754332 35789999999999999999999999999999999999977654 4689999999
Q ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCC--CEEEEecCCCeEE
Q 023642 175 TSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG--RELVAGSSDDCIY 252 (279)
Q Consensus 175 ~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g--~~l~t~s~d~~i~ 252 (279)
++|+|++++|++++.|++|++||+.......... ...+|...|.+++|+|++ ..|++++.|++|+
T Consensus 478 ~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~-------------~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~ 544 (694)
T 3dm0_A 478 VAFSLDNRQIVSASRDRTIKLWNTLGECKYTISE-------------GGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVK 544 (694)
T ss_dssp EEECTTSSCEEEEETTSCEEEECTTSCEEEEECS-------------STTSCSSCEEEEEECSCSSSCEEEEEETTSCEE
T ss_pred EEEeCCCCEEEEEeCCCEEEEEECCCCcceeecc-------------CCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEE
Confidence 9999999999999999999999987544322111 112377799999999986 5899999999999
Q ss_pred EEECCCCeEEEEEeCCCcceeEEEe
Q 023642 253 VYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 253 vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
+||+++++++..+.+|...|+++..
T Consensus 545 vwd~~~~~~~~~~~~h~~~v~~v~~ 569 (694)
T 3dm0_A 545 VWNLSNCKLRSTLAGHTGYVSTVAV 569 (694)
T ss_dssp EEETTTCCEEEEECCCSSCEEEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEE
Confidence 9999999999999999999998865
No 33
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.91 E-value=1.4e-22 Score=182.13 Aligned_cols=163 Identities=17% Similarity=0.222 Sum_probs=134.4
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCC
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (279)
.+++++.+ .+.|+.+.+|+. +......+.+|...|++++|+||+++|++++.|+.|++||... +.+.. +.+|
T Consensus 392 ~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~v~~w~~~~-~~~~~---~~~~ 466 (577)
T 2ymu_A 392 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKTVKLWNRNG-QLLQT---LTGH 466 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTS-CEEEE---EECC
T ss_pred EECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCEEEEEECCC-CEEEE---EcCC
Confidence 35677664 456778888873 3333455789999999999999999999999999999999754 34433 4688
Q ss_pred CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC
Q 023642 169 RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD 248 (279)
Q Consensus 169 ~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d 248 (279)
...|.+++|+|++++|++++.|+.|++||.. ++.... +. +|...|++++|+|+|++|++++.|
T Consensus 467 ~~~v~~~~~spd~~~las~~~d~~i~iw~~~-~~~~~~-----------~~-----~h~~~v~~l~~s~dg~~l~s~~~d 529 (577)
T 2ymu_A 467 SSSVRGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQT-----------LT-----GHSSSVRGVAFSPDGQTIASASDD 529 (577)
T ss_dssp SSCEEEEEECTTSCEEEEEETTSEEEEEETT-SCEEEE-----------EE-----CCSSCEEEEEECTTSSCEEEEETT
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC-CCEEEE-----------Ee-----CCCCCEEEEEEcCCCCEEEEEECc
Confidence 8899999999999999999999999999964 443221 22 266699999999999999999999
Q ss_pred CeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 249 DCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 249 ~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
+.|++||. +++++.++.+|...|+++..
T Consensus 530 g~v~lwd~-~~~~~~~~~~h~~~v~~~~f 557 (577)
T 2ymu_A 530 KTVKLWNR-NGQLLQTLTGHSSSVWGVAF 557 (577)
T ss_dssp SEEEEECT-TSCEEEEEECCSSCEEEEEE
T ss_pred CEEEEEeC-CCCEEEEEcCCCCCEEEEEE
Confidence 99999996 68999999999999998865
No 34
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.91 E-value=1.4e-22 Score=171.33 Aligned_cols=166 Identities=14% Similarity=0.081 Sum_probs=129.1
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
+++++.+ .+.|+.+.+|++........+.+|...|.+++|+|++++|++++.|++|++||+... ..........|.
T Consensus 84 ~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~~~~~~~~~~~ 162 (343)
T 2xzm_R 84 LSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE-CKFSSAEKENHS 162 (343)
T ss_dssp ECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC-EEEECCTTTSCS
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ceeeeecccCCC
Confidence 4566554 467899999998777666778999999999999999999999999999999999844 332322234788
Q ss_pred cceEEEEECCCC----------CEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCC
Q 023642 170 WTVTDTSLSPDQ----------RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239 (279)
Q Consensus 170 ~~v~~~~~sp~~----------~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 239 (279)
..|.+++|+|++ .+|++++.|+.|++||.. ..... .+.+ |...|.+++|+|+|
T Consensus 163 ~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~-~~~~~-----------~~~~-----h~~~v~~~~~s~~g 225 (343)
T 2xzm_R 163 DWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN-FQIRY-----------TFKA-----HESNVNHLSISPNG 225 (343)
T ss_dssp SCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT-TEEEE-----------EEEC-----CSSCEEEEEECTTS
T ss_pred ceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC-CceeE-----------EEcC-----ccccceEEEECCCC
Confidence 899999999987 789999999999999953 32211 1222 66699999999999
Q ss_pred CEEEEecCCCeEEEEECCC-CeEEEEEeCCCcceeEEEe
Q 023642 240 RELVAGSSDDCIYVYDLEA-NKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 240 ~~l~t~s~d~~i~vwd~~~-~~~~~~~~~h~~~v~~v~~ 277 (279)
++|++++.|+.|++||+.. ..+...+. +...|+++..
T Consensus 226 ~~l~sgs~dg~v~iwd~~~~~~~~~~~~-~~~~v~~v~~ 263 (343)
T 2xzm_R 226 KYIATGGKDKKLLIWDILNLTYPQREFD-AGSTINQIAF 263 (343)
T ss_dssp SEEEEEETTCEEEEEESSCCSSCSEEEE-CSSCEEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCcccceeec-CCCcEEEEEE
Confidence 9999999999999999943 44444443 3445666653
No 35
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.91 E-value=5.7e-23 Score=177.60 Aligned_cols=181 Identities=17% Similarity=0.109 Sum_probs=140.7
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
+++++.+ .+.++.+.+|++........+.+|...|++++|+|++++|++|+.|+.|++||+.+++.+.. +.+|.
T Consensus 105 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~---~~~h~ 181 (420)
T 3vl1_A 105 AKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRT---LIGHR 181 (420)
T ss_dssp ECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEE---EECCS
T ss_pred EecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceE---EcCCC
Confidence 3455543 45678899998765544455679999999999999999999999999999999998876554 46899
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccc---------------------------------ccee
Q 023642 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEI---------------------------------HDGL 216 (279)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---------------------------------~~~~ 216 (279)
..|.+++|+|++++|++++.|+.|++||+++++.......... ....
T Consensus 182 ~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 261 (420)
T 3vl1_A 182 ATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKY 261 (420)
T ss_dssp SCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEE
T ss_pred CcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCE
Confidence 9999999999999999999999999999998876544332100 0011
Q ss_pred EEeeCCC------------------CCccccEEEEEEecCCC-EEEEecCCCeEEEEECCCCe-EEEEEeC-CCcceeEE
Q 023642 217 DFSAADD------------------GGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEANK-LSLRILA-HTVNIALW 275 (279)
Q Consensus 217 ~~~~~~~------------------~~~~~~v~~~~~sp~g~-~l~t~s~d~~i~vwd~~~~~-~~~~~~~-h~~~v~~v 275 (279)
.+.+..+ .+|...|.+++|+|+++ +|++++.|+.|++||+++++ ++..+.+ |...|+++
T Consensus 262 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~ 341 (420)
T 3vl1_A 262 VIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV 341 (420)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE
T ss_pred EEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE
Confidence 1111111 34778999999999999 99999999999999999874 4778876 66677766
Q ss_pred E
Q 023642 276 I 276 (279)
Q Consensus 276 ~ 276 (279)
.
T Consensus 342 ~ 342 (420)
T 3vl1_A 342 Y 342 (420)
T ss_dssp E
T ss_pred E
Confidence 4
No 36
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.90 E-value=4.9e-22 Score=168.03 Aligned_cols=174 Identities=13% Similarity=0.021 Sum_probs=138.0
Q ss_pred eccccceEeeeeecCCCC--ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEE
Q 023642 100 SAADCCHMLSRYLPVNGP--WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~--~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (279)
.+.|+.+.+|++...... ..+.+|...|.+++|+|++++|++++.|+.|++||+.+++... ...|...|.+++|
T Consensus 60 ~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~----~~~~~~~v~~~~~ 135 (368)
T 3mmy_A 60 GSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQ----IAQHDAPVKTIHW 135 (368)
T ss_dssp EETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE----EEECSSCEEEEEE
T ss_pred ECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCcee----eccccCceEEEEE
Confidence 456889999998763333 4678999999999999999999999999999999999987654 3468889999999
Q ss_pred --CCCCCEEEEEeCCCeEEEEECCCCceeeeeccccc------------------------------------------c
Q 023642 178 --SPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEI------------------------------------------H 213 (279)
Q Consensus 178 --sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~------------------------------------------~ 213 (279)
+|++++|++++.|+.|++||+++++.......... .
T Consensus 136 ~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 215 (368)
T 3mmy_A 136 IKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQH 215 (368)
T ss_dssp EECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCE
T ss_pred EeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCC
Confidence 99999999999999999999988764322211000 0
Q ss_pred cee------------EEeeCCC--------------------CCccc------------cEEEEEEecCCCEEEEecCCC
Q 023642 214 DGL------------DFSAADD--------------------GGYSF------------GIFSLKFSTDGRELVAGSSDD 249 (279)
Q Consensus 214 ~~~------------~~~~~~~--------------------~~~~~------------~v~~~~~sp~g~~l~t~s~d~ 249 (279)
... ...+..+ .+|.. .|.+++|+|++++|++++.|+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg 295 (368)
T 3mmy_A 216 RCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG 295 (368)
T ss_dssp EEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS
T ss_pred ceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC
Confidence 000 0000000 12333 699999999999999999999
Q ss_pred eEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 250 CIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 250 ~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.|++||+.+++++..+.+|...|+++..
T Consensus 296 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 323 (368)
T 3mmy_A 296 RFSFWDKDARTKLKTSEQLDQPISACCF 323 (368)
T ss_dssp CEEEEETTTTEEEEECCCCSSCEEEEEE
T ss_pred eEEEEECCCCcEEEEecCCCCCceEEEE
Confidence 9999999999999999999999998875
No 37
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.90 E-value=7.7e-23 Score=174.51 Aligned_cols=152 Identities=14% Similarity=0.100 Sum_probs=121.2
Q ss_pred ccCCCCee--eccccceEeeeeecCCCC--ceeeCCCCCeEEEEECCCCCEEEEEeCCC----cEEEEEcCCCeEE-eee
Q 023642 92 NYSGRGRF--SAADCCHMLSRYLPVNGP--WPVDQTTSRAYVSQFSADGSLFVAGFQAS----QIRIYDVERGWKI-QKD 162 (279)
Q Consensus 92 ~~~~~~~~--~~~d~~~~~~~~~~~~~~--~~l~~h~~~V~~~~~spd~~~l~s~~~d~----~i~iwd~~~~~~~-~~~ 162 (279)
.|+++|.+ .+.++.+.+|........ ....+|...|.+++|+|+++++++++.|+ .+++|++..+... ...
T Consensus 183 ~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~ 262 (365)
T 4h5i_A 183 HFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRS 262 (365)
T ss_dssp EECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEE
T ss_pred EEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceee
Confidence 46788776 345666666665544332 23467899999999999999999999887 6889998776432 223
Q ss_pred eeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEE
Q 023642 163 ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL 242 (279)
Q Consensus 163 ~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 242 (279)
..+.+|...|++++|+|||++||+|+.|++|+|||+++++...... .+|...|++++|+|||++|
T Consensus 263 ~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~---------------~gH~~~V~~v~fSpdg~~l 327 (365)
T 4h5i_A 263 KQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFK---------------QAHSFAITEVTISPDSTYV 327 (365)
T ss_dssp EEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEET---------------TSSSSCEEEEEECTTSCEE
T ss_pred eeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEec---------------CcccCCEEEEEECCCCCEE
Confidence 3456888899999999999999999999999999999988643211 1377899999999999999
Q ss_pred EEecCCCeEEEEECCC
Q 023642 243 VAGSSDDCIYVYDLEA 258 (279)
Q Consensus 243 ~t~s~d~~i~vwd~~~ 258 (279)
+++|.|++|+|||++.
T Consensus 328 aS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 328 ASVSAANTIHIIKLPL 343 (365)
T ss_dssp EEEETTSEEEEEECCT
T ss_pred EEEeCCCeEEEEEcCC
Confidence 9999999999999964
No 38
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.90 E-value=2.5e-23 Score=174.00 Aligned_cols=171 Identities=11% Similarity=0.084 Sum_probs=134.7
Q ss_pred cCCCCee---eccccceEeeeeecCCC--CceeeCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEEcCCCeEEeeeeec
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNG--PWPVDQTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWKIQKDILA 165 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~--~~~l~~h~~~V~~~~~sp--d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 165 (279)
+++++.+ .+.|+.+.+|++..... ...+.+|.+.|.+++|+| ++++|++|+.|++|++||+.++.... ...+
T Consensus 21 ~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~-~~~~ 99 (316)
T 3bg1_A 21 MDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK-SHEH 99 (316)
T ss_dssp ECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE-EEEE
T ss_pred EcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE-EEEc
Confidence 4455543 46788999999875432 345789999999999986 48999999999999999998864211 1235
Q ss_pred cCCCcceEEEEECCC--CCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC-----
Q 023642 166 KSLRWTVTDTSLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD----- 238 (279)
Q Consensus 166 ~~~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~----- 238 (279)
.+|...|.+++|+|+ +.+|++++.|+.|++||++.+......... .+|...|.+++|+|+
T Consensus 100 ~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~-------------~~h~~~v~~~~~~~~~~~~~ 166 (316)
T 3bg1_A 100 AGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKIN-------------NAHTIGCNAVSWAPAVVPGS 166 (316)
T ss_dssp CCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBT-------------TSSSSCBCCCEECCCCCC--
T ss_pred cCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeee-------------ccccCCcceEEEccccCCcc
Confidence 689999999999998 789999999999999999876422111111 126668899999997
Q ss_pred ------------CCEEEEecCCCeEEEEECCCC---eEEEEEeCCCcceeEEEe
Q 023642 239 ------------GRELVAGSSDDCIYVYDLEAN---KLSLRILAHTVNIALWIT 277 (279)
Q Consensus 239 ------------g~~l~t~s~d~~i~vwd~~~~---~~~~~~~~h~~~v~~v~~ 277 (279)
+++|++|+.|++|++||++.+ +++..+.+|...|+++..
T Consensus 167 ~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~ 220 (316)
T 3bg1_A 167 LIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAW 220 (316)
T ss_dssp ----CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEEEEEC
T ss_pred ccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceEEEEe
Confidence 478999999999999999765 578889999999998864
No 39
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.90 E-value=5e-22 Score=178.60 Aligned_cols=180 Identities=18% Similarity=0.261 Sum_probs=141.3
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCC
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (279)
.++|+|++ .+.|+.+.+|+. ..+....+.+|...|++++|+||+++|++++.|++|++||+. ++.+.. +.+|
T Consensus 23 a~spdg~~las~~~d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i~vWd~~-~~~~~~---~~~~ 97 (577)
T 2ymu_A 23 AFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRN-GQLLQT---LTGH 97 (577)
T ss_dssp EECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEE---ECCC
T ss_pred EECCCCCEEEEEeCCCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEECC-CCEEEE---EECC
Confidence 36777765 456788999983 444556689999999999999999999999999999999965 445443 5689
Q ss_pred CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCC------------------------C
Q 023642 169 RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD------------------------G 224 (279)
Q Consensus 169 ~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------~ 224 (279)
...|.+++|+|++++|++++.|+.+++|+....................+.++.. .
T Consensus 98 ~~~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (577)
T 2ymu_A 98 SSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLT 177 (577)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEECTTSCEEEEEE
T ss_pred CCCEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecCCccceecccccceeccccceeeeeecc
Confidence 9999999999999999999999999999987655433222211111111111111 3
Q ss_pred CccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 225 GYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 225 ~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.|...|.++.|+|++++|++++.|+.|++||. +++.+..+.+|...|.++..
T Consensus 178 ~~~~~v~~~~~~~~~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~ 229 (577)
T 2ymu_A 178 GHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAF 229 (577)
T ss_dssp CCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEE
T ss_pred CCCcceeeeeecCCCCEEEEEcCCCEEEEEeC-CCcEEEEEecCCCCEEEEEE
Confidence 46678999999999999999999999999996 57889999999999998764
No 40
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.90 E-value=4.7e-22 Score=166.45 Aligned_cols=185 Identities=11% Similarity=0.071 Sum_probs=140.4
Q ss_pred cCCCCee---eccccceEeeeeecCCCC----ceeeCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEEcCCCeE-----
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGP----WPVDQTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWK----- 158 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~----~~l~~h~~~V~~~~~sp--d~~~l~s~~~d~~i~iwd~~~~~~----- 158 (279)
+++++.+ .+.|+.+.+|++...... ..+.+|...|++++|+| ++++|++|+.|+.|++||+.++..
T Consensus 19 ~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~ 98 (351)
T 3f3f_A 19 YDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGR 98 (351)
T ss_dssp ECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSC
T ss_pred EcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCccccccc
Confidence 4555543 456888999998765433 33579999999999999 699999999999999999987631
Q ss_pred -EeeeeeccCCCcceEEEEECCC--CCEEEEEeCCCeEEEEECCCCceeeeecc--------------ccccceeEEeeC
Q 023642 159 -IQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANV--------------TEIHDGLDFSAA 221 (279)
Q Consensus 159 -~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~--------------~~~~~~~~~~~~ 221 (279)
.........|...|.+++|+|+ +.+|++++.|+.|++||+++++....... ......+.+.+.
T Consensus 99 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 178 (351)
T 3f3f_A 99 RWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPS 178 (351)
T ss_dssp SEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCC
T ss_pred CcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccC
Confidence 1122335688899999999999 99999999999999999987764211110 000001111111
Q ss_pred ------------------------------CCCCccccEEEEEEecCC----CEEEEecCCCeEEEEECCCC--------
Q 023642 222 ------------------------------DDGGYSFGIFSLKFSTDG----RELVAGSSDDCIYVYDLEAN-------- 259 (279)
Q Consensus 222 ------------------------------~~~~~~~~v~~~~~sp~g----~~l~t~s~d~~i~vwd~~~~-------- 259 (279)
.-.+|...|.+++|+|++ ++|++++.|+.|++||++++
T Consensus 179 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~ 258 (351)
T 3f3f_A 179 RFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEE 258 (351)
T ss_dssp SSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-------
T ss_pred CCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCC
Confidence 013578899999999998 89999999999999999875
Q ss_pred --------------------------------------eEEEEEeCCCcceeEEEe
Q 023642 260 --------------------------------------KLSLRILAHTVNIALWIT 277 (279)
Q Consensus 260 --------------------------------------~~~~~~~~h~~~v~~v~~ 277 (279)
+++..+.+|...|+++..
T Consensus 259 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 314 (351)
T 3f3f_A 259 SLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSW 314 (351)
T ss_dssp --------------------------------CCSEEEEEEEEECTTSSCEEEEEE
T ss_pred cccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEE
Confidence 788889999999999875
No 41
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.90 E-value=7.6e-23 Score=178.38 Aligned_cols=170 Identities=14% Similarity=0.087 Sum_probs=130.4
Q ss_pred eccccceEeeeeecCCCCce--eeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEE
Q 023642 100 SAADCCHMLSRYLPVNGPWP--VDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS 176 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~--l~~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 176 (279)
++.|+.+.+|++........ +.+|.+.|++++|+| ++.+|++|+.|++|++||+.++.. ........+...+.+++
T Consensus 138 Gs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~-~~~~~~~~~~~~~~~~~ 216 (435)
T 4e54_B 138 GSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNIL-RVFASSDTINIWFCSLD 216 (435)
T ss_dssp EETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEE-EEEECCSSCSCCCCCEE
T ss_pred EeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCce-eEEeccCCCCccEEEEE
Confidence 56789999999876655443 468999999999998 789999999999999999987643 23233344555788999
Q ss_pred ECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCC-----------------------------CCcc
Q 023642 177 LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD-----------------------------GGYS 227 (279)
Q Consensus 177 ~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------------~~~~ 227 (279)
|+|++++|++|+.|+.|++||+++.....+.........+.|.+.+. .+|.
T Consensus 217 ~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~ 296 (435)
T 4e54_B 217 VSASSRMVVTGDNVGNVILLNMDGKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHR 296 (435)
T ss_dssp EETTTTEEEEECSSSBEEEEESSSCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCS
T ss_pred ECCCCCEEEEEeCCCcEeeeccCcceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeecc
Confidence 99999999999999999999997654322222111111222221111 3578
Q ss_pred ccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCc
Q 023642 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTV 270 (279)
Q Consensus 228 ~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~ 270 (279)
..|++++|+|+|++|++++.|++|++||+.++.+...+.+|..
T Consensus 297 ~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~~ 339 (435)
T 4e54_B 297 HPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLIPHPH 339 (435)
T ss_dssp SCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEECCCCC
T ss_pred ccccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEecccc
Confidence 8999999999999999999999999999999988888877653
No 42
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.90 E-value=2.8e-22 Score=170.48 Aligned_cols=187 Identities=9% Similarity=0.042 Sum_probs=130.6
Q ss_pred CccCCCCeee---cc------ccceEeeeeecCCCC----ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCe
Q 023642 91 GNYSGRGRFS---AA------DCCHMLSRYLPVNGP----WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW 157 (279)
Q Consensus 91 ~~~~~~~~~~---~~------d~~~~~~~~~~~~~~----~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~ 157 (279)
..|+|+|.+. +. |..+.+|+....... ....+|...|++++|+|++. +++++.|++|+|||+.+++
T Consensus 48 v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~l~~s~dg~v~lWd~~~~~ 126 (357)
T 4g56_B 48 VRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-ILVASDSGAVELWEILEKE 126 (357)
T ss_dssp EEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-EEEEETTSCEEEC------
T ss_pred EEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-EEEEECCCEEEEeeccccc
Confidence 3577887762 22 344555554433322 22467999999999999976 5567889999999998876
Q ss_pred EEeee-eeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeecc-ccccceeEEeeCCC------------
Q 023642 158 KIQKD-ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV-TEIHDGLDFSAADD------------ 223 (279)
Q Consensus 158 ~~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~------------ 223 (279)
..... ....+|...|.+++|+|++++|++++.|+.|++||+.+++....... ......+.|.+.+.
T Consensus 127 ~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v 206 (357)
T 4g56_B 127 SLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRI 206 (357)
T ss_dssp --CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCE
T ss_pred eeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCce
Confidence 54321 23457899999999999999999999999999999998876443321 11111222222211
Q ss_pred ----------------CCccccEEEEEEecC-CCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEee
Q 023642 224 ----------------GGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWITC 278 (279)
Q Consensus 224 ----------------~~~~~~v~~~~~sp~-g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~~ 278 (279)
..|...+.+++|+|+ +.+|++|+.|+.|++||+++++++.++.+|...|+++..+
T Consensus 207 ~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~s 278 (357)
T 4g56_B 207 LLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHSQNITGLAYS 278 (357)
T ss_dssp EECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCSSCEEEEEEC
T ss_pred EEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccceeEEEEEEc
Confidence 235667999999998 5688899999999999999999999999999999998753
No 43
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.90 E-value=2.7e-22 Score=166.23 Aligned_cols=142 Identities=18% Similarity=0.125 Sum_probs=117.1
Q ss_pred eeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCC--eEEeeeeeccCCCcceEEEEECCC--CCEEEEEeCCCeEE
Q 023642 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERG--WKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIVH 194 (279)
Q Consensus 119 ~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~--~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~i~ 194 (279)
++.+|.+.|++++|+|+|++|++|+.|++|+|||+... +.+. .+.+|.++|.+++|+|+ +++|++++.|++|+
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~---~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLID---TLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCE---EECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEE---EEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 46789999999999999999999999999999999753 2222 35789999999999864 89999999999999
Q ss_pred EEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC--CCEEEEecCCCeEEEEECCCCe--EEEEEeCCCc
Q 023642 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK--LSLRILAHTV 270 (279)
Q Consensus 195 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--g~~l~t~s~d~~i~vwd~~~~~--~~~~~~~h~~ 270 (279)
+||+.+++...... +. +|...|.+++|+|+ +.+|++++.|++|++||++++. ....+.+|..
T Consensus 81 iWd~~~~~~~~~~~---------~~-----~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~ 146 (297)
T 2pm7_B 81 IWKEENGRWSQIAV---------HA-----VHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 146 (297)
T ss_dssp EEEBSSSCBCCCEE---------EC-----CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS
T ss_pred EEEcCCCceEEEEE---------ee-----cCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC
Confidence 99998875322111 11 26669999999998 8999999999999999998763 2467789999
Q ss_pred ceeEEEe
Q 023642 271 NIALWIT 277 (279)
Q Consensus 271 ~v~~v~~ 277 (279)
.|+++..
T Consensus 147 ~v~~~~~ 153 (297)
T 2pm7_B 147 GVNSASW 153 (297)
T ss_dssp CEEEEEE
T ss_pred ccceEee
Confidence 9888754
No 44
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.90 E-value=2.8e-21 Score=161.57 Aligned_cols=181 Identities=12% Similarity=0.096 Sum_probs=144.6
Q ss_pred cCCCCee---eccccceEeeeeecCC--CCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS 167 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~--~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 167 (279)
+++++.+ .+.++.+.+|++.... ....+..|...|.+++|+|++++|++++.|+.|++||+.+++.... +..
T Consensus 105 ~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~---~~~ 181 (337)
T 1gxr_A 105 LLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQ---FQG 181 (337)
T ss_dssp ECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEE---ECC
T ss_pred EcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeee---eec
Confidence 4556543 4567889999887655 2345788999999999999999999999999999999999876654 457
Q ss_pred CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCC------------------------
Q 023642 168 LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD------------------------ 223 (279)
Q Consensus 168 ~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------ 223 (279)
|...|.+++|+|++++|++++.|+.|++||+++++.............+.|.+++.
T Consensus 182 ~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~ 261 (337)
T 1gxr_A 182 HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQL 261 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEE
T ss_pred ccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEE
Confidence 88899999999999999999999999999999887754443333333333333322
Q ss_pred CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 224 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 224 ~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
..|...|.+++|+|++++|++++.|+.|++||+.+++.+... .|...|.++..
T Consensus 262 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~ 314 (337)
T 1gxr_A 262 HLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDI 314 (337)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEE
T ss_pred cCCccceeEEEECCCCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEE
Confidence 457889999999999999999999999999999999888554 47788887754
No 45
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.90 E-value=2.4e-21 Score=162.47 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=120.1
Q ss_pred eeeCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCCCeEE--eeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEE
Q 023642 119 PVDQTTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGWKI--QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (279)
Q Consensus 119 ~l~~h~~~V~~~~~spd-~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i 195 (279)
+|.||.+.|++++|+|+ +++|+||+.|++|+|||+.+.+.. .....+.+|...|.+++|+|++++|++++.|+.|++
T Consensus 33 tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~ 112 (340)
T 4aow_A 33 TLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRL 112 (340)
T ss_dssp EECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEE
T ss_pred EECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceE
Confidence 58899999999999997 689999999999999999865321 122235789999999999999999999999999999
Q ss_pred EECCCCceeeeecccccc--------------------------------------------ceeEEeeCC---------
Q 023642 196 VDVGSGTMESLANVTEIH--------------------------------------------DGLDFSAAD--------- 222 (279)
Q Consensus 196 ~d~~~~~~~~~~~~~~~~--------------------------------------------~~~~~~~~~--------- 222 (279)
|+................ ....|....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~ 192 (340)
T 4aow_A 113 WDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCG 192 (340)
T ss_dssp EETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred EeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEc
Confidence 988765542221110000 000011000
Q ss_pred -C-----------------CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEE
Q 023642 223 -D-----------------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 223 -~-----------------~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~ 276 (279)
+ .+|...|++++|+|++++|++++.|++|++||+++++++..+.++ ..|.++.
T Consensus 193 ~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~ 263 (340)
T 4aow_A 193 WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLDGG-DIINALC 263 (340)
T ss_dssp TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECS-SCEEEEE
T ss_pred CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeeecCC-ceEEeee
Confidence 0 568889999999999999999999999999999999999999865 4566554
No 46
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.90 E-value=2.3e-22 Score=172.42 Aligned_cols=148 Identities=18% Similarity=0.142 Sum_probs=120.9
Q ss_pred eccccceEeeeeec-CCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeec----cCCCcceEE
Q 023642 100 SAADCCHMLSRYLP-VNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA----KSLRWTVTD 174 (279)
Q Consensus 100 ~~~d~~~~~~~~~~-~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~----~~~~~~v~~ 174 (279)
.+.|+.+.+|++.. ......+.+|.+.|++++|+|++++|++|+.|++|++||+.++..+...... ..+...|++
T Consensus 224 gs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~ 303 (380)
T 3iz6_a 224 GSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTS 303 (380)
T ss_dssp EETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSE
T ss_pred EECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecccccccccccCceEE
Confidence 46788999999864 3455678999999999999999999999999999999999999776543211 112235899
Q ss_pred EEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEE
Q 023642 175 TSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVY 254 (279)
Q Consensus 175 ~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vw 254 (279)
++|+|+|++|++++.|+.|++||+..++........ ..+|...|.+++|+|+|++|++|+.|++|++|
T Consensus 304 ~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~------------~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW 371 (380)
T 3iz6_a 304 VAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTL------------QNSHEGRISCLGLSSDGSALCTGSWDKNLKIW 371 (380)
T ss_dssp EEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCS------------CSSCCCCCCEEEECSSSSEEEEECTTSCEEEE
T ss_pred EEECCCCCEEEEEECCCCEEEEECCCCceEEEEecc------------cCCCCCceEEEEECCCCCEEEEeeCCCCEEEE
Confidence 999999999999999999999999887764322110 11377799999999999999999999999999
Q ss_pred ECCCC
Q 023642 255 DLEAN 259 (279)
Q Consensus 255 d~~~~ 259 (279)
++...
T Consensus 372 ~~~~~ 376 (380)
T 3iz6_a 372 AFSGH 376 (380)
T ss_dssp ECCSS
T ss_pred ecCCC
Confidence 98764
No 47
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.90 E-value=3.3e-22 Score=184.19 Aligned_cols=168 Identities=19% Similarity=0.173 Sum_probs=138.7
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
+++++.+ .+.|+.+.+|++........+.+|...|.+++|+|++++|++|+.|++|++||..............+|.
T Consensus 438 ~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~ 517 (694)
T 3dm0_A 438 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHR 517 (694)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCS
T ss_pred ECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCC
Confidence 5677665 4678899999987666666789999999999999999999999999999999987654333222335788
Q ss_pred cceEEEEECCCC--CEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC
Q 023642 170 WTVTDTSLSPDQ--RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247 (279)
Q Consensus 170 ~~v~~~~~sp~~--~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~ 247 (279)
..|.+++|+|++ ..|++++.|++|++||+++++..... . +|...|++++|+|++++|++++.
T Consensus 518 ~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~-----------~-----~h~~~v~~v~~spdg~~l~sg~~ 581 (694)
T 3dm0_A 518 DWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTL-----------A-----GHTGYVSTVAVSPDGSLCASGGK 581 (694)
T ss_dssp SCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEE-----------C-----CCSSCEEEEEECTTSSEEEEEET
T ss_pred CcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEE-----------c-----CCCCCEEEEEEeCCCCEEEEEeC
Confidence 899999999987 57999999999999999987764322 1 26779999999999999999999
Q ss_pred CCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 248 DDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 248 d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
|++|++||+++++++..+..+ ..|.++..
T Consensus 582 Dg~i~iwd~~~~~~~~~~~~~-~~v~~~~~ 610 (694)
T 3dm0_A 582 DGVVLLWDLAEGKKLYSLEAN-SVIHALCF 610 (694)
T ss_dssp TSBCEEEETTTTEEEECCBCS-SCEEEEEE
T ss_pred CCeEEEEECCCCceEEEecCC-CcEEEEEE
Confidence 999999999999998888754 45666543
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.89 E-value=1.1e-21 Score=166.61 Aligned_cols=172 Identities=8% Similarity=0.023 Sum_probs=140.5
Q ss_pred cCCCCee---eccccceEeeeeecCC--CCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVN--GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS 167 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~--~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 167 (279)
+++++.+ .+.++.+.+|++.... ....+.+|...|.+++|+|++++|++++.|+.|++||+.+++.... .....
T Consensus 16 ~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~-~~~~~ 94 (372)
T 1k8k_C 16 WNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT-LVILR 94 (372)
T ss_dssp ECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE-EECCC
T ss_pred ECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee-EEeec
Confidence 3445443 4468889999987665 5566889999999999999999999999999999999988864433 23467
Q ss_pred CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC
Q 023642 168 LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247 (279)
Q Consensus 168 ~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~ 247 (279)
|...|.+++|+|++++|++++.|+.|++||+..+......... ..+|...|.+++|+|++++|++++.
T Consensus 95 ~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~------------~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 95 INRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI------------KKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp CSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE------------CTTCCSCEEEEEECTTSSEEEEEET
T ss_pred CCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee------------ecccCCCeeEEEEcCCCCEEEEEcC
Confidence 8889999999999999999999999999999887632111110 0125669999999999999999999
Q ss_pred CCeEEEEEC------------------CCCeEEEEEeCCCcceeEEEe
Q 023642 248 DDCIYVYDL------------------EANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 248 d~~i~vwd~------------------~~~~~~~~~~~h~~~v~~v~~ 277 (279)
|+.|++||+ ..++++..+.+|...|+++..
T Consensus 163 dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 210 (372)
T 1k8k_C 163 DFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCF 210 (372)
T ss_dssp TSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEE
T ss_pred CCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEE
Confidence 999999995 478899999999999998865
No 49
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.89 E-value=3.9e-22 Score=171.92 Aligned_cols=185 Identities=15% Similarity=0.113 Sum_probs=144.7
Q ss_pred cCCCCee---eccccceEeeeeecC----CCCceeeCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCCCe------E
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPV----NGPWPVDQTTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGW------K 158 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~----~~~~~l~~h~~~V~~~~~spd-~~~l~s~~~d~~i~iwd~~~~~------~ 158 (279)
+++++.+ .+.|+.+.+|++... .....+.+|...|.+++|+|+ +++|++++.|+.|++||+.++. .
T Consensus 75 ~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~ 154 (416)
T 2pm9_A 75 WSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYT 154 (416)
T ss_dssp ECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCC
T ss_pred ECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCcccccccc
Confidence 4555543 456889999998762 233457899999999999998 8999999999999999999875 3
Q ss_pred EeeeeeccCCCcceEEEEECCC-CCEEEEEeCCCeEEEEECCCCceeeeeccc-------cccceeEEeeCC--------
Q 023642 159 IQKDILAKSLRWTVTDTSLSPD-QRHLVYASMSPIVHIVDVGSGTMESLANVT-------EIHDGLDFSAAD-------- 222 (279)
Q Consensus 159 ~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-------~~~~~~~~~~~~-------- 222 (279)
.........|...|.+++|+|+ +.+|++++.|+.|++||+++++........ .....+.|.+.+
T Consensus 155 ~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 234 (416)
T 2pm9_A 155 PLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATAT 234 (416)
T ss_dssp CBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEE
T ss_pred ccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEE
Confidence 3222234578889999999999 789999999999999999987764333221 111112222111
Q ss_pred ------C----------------C-CccccEEEEEEec-CCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 223 ------D----------------G-GYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 223 ------~----------------~-~~~~~v~~~~~sp-~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
. . +|...|.+++|+| ++++|++++.|+.|++||+++++++..+.+|...|+++..
T Consensus 235 ~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~ 313 (416)
T 2pm9_A 235 GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKF 313 (416)
T ss_dssp CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEE
T ss_pred CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEE
Confidence 1 3 6888999999999 8999999999999999999999999999999999988765
No 50
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.89 E-value=2.9e-21 Score=169.28 Aligned_cols=174 Identities=17% Similarity=0.241 Sum_probs=140.3
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEEC-
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS- 178 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s- 178 (279)
++.|+.+.+|++........+.+|.+.|.+++|+|++ +|++|+.|++|++||+.+++++.. +.+|...|.+++|+
T Consensus 138 gs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~---~~~h~~~v~~l~~~~ 213 (464)
T 3v7d_B 138 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHV---FEGHNSTVRCLDIVE 213 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEEEE
T ss_pred EcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEE---ECCCCCccEEEEEec
Confidence 4678899999987776667788999999999999988 999999999999999999976654 46899999999998
Q ss_pred -CCCCEEEEEeCCCeEEEEECCCCceeeeec--------------------ccccc----------ceeEEeeCCC----
Q 023642 179 -PDQRHLVYASMSPIVHIVDVGSGTMESLAN--------------------VTEIH----------DGLDFSAADD---- 223 (279)
Q Consensus 179 -p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~--------------------~~~~~----------~~~~~~~~~~---- 223 (279)
|++.+|++++.|+.|++||+.++....... ....+ ....+.+..+
T Consensus 214 ~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~ 293 (464)
T 3v7d_B 214 YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLI 293 (464)
T ss_dssp SSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEE
T ss_pred CCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEE
Confidence 578899999999999999998765321100 00000 0011111111
Q ss_pred -------------CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 224 -------------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 224 -------------~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.+|...|.+++|+|++++|++++.|+.|++||+++++++.++.+|...|.++..
T Consensus 294 vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~ 360 (464)
T 3v7d_B 294 VWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL 360 (464)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEE
Confidence 458889999999999999999999999999999999999999999999988754
No 51
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.89 E-value=1.3e-21 Score=166.26 Aligned_cols=170 Identities=14% Similarity=0.147 Sum_probs=137.0
Q ss_pred cCCCCee---eccccceEeeeeec--CCCCceeeCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEcCCCeEEeeeeec
Q 023642 93 YSGRGRF---SAADCCHMLSRYLP--VNGPWPVDQTTSRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILA 165 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~--~~~~~~l~~h~~~V~~~~~spd--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 165 (279)
+++++.+ .+.|+.+.+|++.. ......+.+|...|++++|+|+ +++|++|+.|+.|++||+.++..... ...
T Consensus 19 ~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~-~~~ 97 (379)
T 3jrp_A 19 LDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQI-AVH 97 (379)
T ss_dssp ECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEEE-EEE
T ss_pred EcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeEe-eee
Confidence 4555543 45688999999873 3334557899999999999987 99999999999999999998863222 234
Q ss_pred cCCCcceEEEEECCC--CCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEec------
Q 023642 166 KSLRWTVTDTSLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST------ 237 (279)
Q Consensus 166 ~~~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp------ 237 (279)
..|...|.+++|+|+ +.+|++++.|+.|++||+.++....... +. +|...|.+++|+|
T Consensus 98 ~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---------~~-----~~~~~v~~~~~~~~~~~~~ 163 (379)
T 3jrp_A 98 AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII---------ID-----AHAIGVNSASWAPATIEED 163 (379)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE---------EE-----CCTTCEEEEEECCCC----
T ss_pred cCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE---------ec-----CCCCceEEEEEcCcccccc
Confidence 678889999999999 9999999999999999999875422211 11 1556899999999
Q ss_pred -------CCCEEEEecCCCeEEEEECCCCe----EEEEEeCCCcceeEEEe
Q 023642 238 -------DGRELVAGSSDDCIYVYDLEANK----LSLRILAHTVNIALWIT 277 (279)
Q Consensus 238 -------~g~~l~t~s~d~~i~vwd~~~~~----~~~~~~~h~~~v~~v~~ 277 (279)
++.+|++++.|+.|++||++++. ++..+.+|...|+++..
T Consensus 164 ~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 164 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp ------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred ccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 69999999999999999998653 66788899999998865
No 52
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.89 E-value=7.1e-22 Score=165.19 Aligned_cols=144 Identities=16% Similarity=0.137 Sum_probs=120.5
Q ss_pred eeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeee--ccCCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 023642 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDIL--AKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (279)
Q Consensus 119 ~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~ 196 (279)
...+|...|++++|+|++++|++++ |+.|++||+.++........ ...|...|.+++|+|++++|++++.|+.|++|
T Consensus 46 ~~~~h~~~v~~~~~~~~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~ 124 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIW 124 (337)
T ss_dssp EEECCSSCCCEEEECSSSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEE
T ss_pred eeccCCCceEEEEEecCCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEE
Confidence 3568999999999999999999999 99999999987643322222 23788899999999999999999999999999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEE
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~ 276 (279)
|+.+++...... +.. |...|.+++|+|++++|++++.|+.|++||+++++.+..+.+|...|.++.
T Consensus 125 d~~~~~~~~~~~---------~~~-----~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~ 190 (337)
T 1gxr_A 125 DLAAPTPRIKAE---------LTS-----SAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTDGASCID 190 (337)
T ss_dssp ECCCC--EEEEE---------EEC-----SSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEE
T ss_pred ECCCCCcceeee---------ccc-----CCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccCceEEEE
Confidence 999876422211 111 555899999999999999999999999999999999999999999998876
Q ss_pred e
Q 023642 277 T 277 (279)
Q Consensus 277 ~ 277 (279)
.
T Consensus 191 ~ 191 (337)
T 1gxr_A 191 I 191 (337)
T ss_dssp E
T ss_pred E
Confidence 5
No 53
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.89 E-value=1.6e-21 Score=168.46 Aligned_cols=165 Identities=13% Similarity=0.156 Sum_probs=134.4
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCC
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (279)
.+++++.+ .+.|+.+.+|+.........+..| ..+....|+|++++|++|+.|+.|++||+.++..... +..|
T Consensus 63 ~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~h 138 (420)
T 3vl1_A 63 TFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREI---DQAH 138 (420)
T ss_dssp EEEEEETTEEEEEETTEEEEEECCSEETTTTSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEE---TTSS
T ss_pred eeeecCCeEEEEEcCCcEEEEEecccceeeEEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeee---cccc
Confidence 34554443 456888999998776666666666 5566668999999999999999999999998866543 4689
Q ss_pred CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC
Q 023642 169 RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD 248 (279)
Q Consensus 169 ~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d 248 (279)
...|.+++|+|++++|++++.|+.|++||+.+++.... +. +|...|.+++|+|++++|++++.|
T Consensus 139 ~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~-----------~~-----~h~~~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 139 VSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRT-----------LI-----GHRATVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp SSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEE-----------EE-----CCSSCEEEEEEETTTTEEEEEETT
T ss_pred cCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceE-----------Ec-----CCCCcEEEEEEcCCCCEEEEEcCC
Confidence 99999999999999999999999999999998775432 21 266799999999999999999999
Q ss_pred CeEEEEECCCCeEEEEEeC---CCcceeEEE
Q 023642 249 DCIYVYDLEANKLSLRILA---HTVNIALWI 276 (279)
Q Consensus 249 ~~i~vwd~~~~~~~~~~~~---h~~~v~~v~ 276 (279)
++|++||+++++++..+.. |...|.++.
T Consensus 203 ~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 233 (420)
T 3vl1_A 203 GTIRLWECGTGTTIHTFNRKENPHDGVNSIA 233 (420)
T ss_dssp SCEEEEETTTTEEEEEECBTTBTTCCEEEEE
T ss_pred CcEEEeECCCCceeEEeecCCCCCCCccEEE
Confidence 9999999999999999985 444555443
No 54
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=9e-22 Score=185.89 Aligned_cols=172 Identities=12% Similarity=0.098 Sum_probs=134.2
Q ss_pred cCCCCee---eccccceEeeeeecCCCC--cee---------eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeE
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGP--WPV---------DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK 158 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~--~~l---------~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~ 158 (279)
+++++.+ .+.|+++.+|++...... ..+ .+|...|++++|+||+++||+|+.|++|+|||+.+++.
T Consensus 443 ~spdg~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~lwd~~~~~~ 522 (902)
T 2oaj_A 443 PAEYGTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVLFKYEVNQF 522 (902)
T ss_dssp CCSEEEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEEEEEEECCC
T ss_pred ccccCcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEEEEecCccc
Confidence 4566665 568999999998665321 112 18999999999999999999999999999999986621
Q ss_pred ------------------------------------------EeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 023642 159 ------------------------------------------IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (279)
Q Consensus 159 ------------------------------------------~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~ 196 (279)
......+.+|.+.|++++|+||| +||+|+.|++|+||
T Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lw 601 (902)
T 2oaj_A 523 YSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLI 601 (902)
T ss_dssp ---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEE
T ss_pred cCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEE
Confidence 01123456799999999999999 99999999999999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEe-----cCC---CEEEEecCCCeEEEEEC---CCCeEEEEE
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS-----TDG---RELVAGSSDDCIYVYDL---EANKLSLRI 265 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-----p~g---~~l~t~s~d~~i~vwd~---~~~~~~~~~ 265 (279)
|++++........ .. +. .+|...|++++|+ ||| ++|++|+.|++|++||+ .+|+++.++
T Consensus 602 d~~~~~~~~~~~~-~~-----~~----~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~ 671 (902)
T 2oaj_A 602 DRRGPAIIYMENI-RE-----IS----GAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQL 671 (902)
T ss_dssp ETTTTEEEEEEEG-GG-----TC----SSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEE
T ss_pred ECCCCeEEEEeeh-hH-----hc----cccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEe
Confidence 9987765321111 00 00 1377799999999 886 89999999999999999 789999999
Q ss_pred eCCC-----cceeEE
Q 023642 266 LAHT-----VNIALW 275 (279)
Q Consensus 266 ~~h~-----~~v~~v 275 (279)
.+|. ++|.++
T Consensus 672 ~~~~~~~~~~~v~~i 686 (902)
T 2oaj_A 672 MDITNVTSKGPIHKI 686 (902)
T ss_dssp EEEEECCSSCCCCEE
T ss_pred cCceecCCCCceEEE
Confidence 8885 556554
No 55
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.89 E-value=2e-22 Score=168.54 Aligned_cols=144 Identities=19% Similarity=0.120 Sum_probs=112.0
Q ss_pred eeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC--CCCEEEEEeCCCeEEEE
Q 023642 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP--DQRHLVYASMSPIVHIV 196 (279)
Q Consensus 119 ~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~i~i~ 196 (279)
.+.+|.+.|++++|+|+|++|++|+.|++|++||+.++.... ...+.+|...|.+++|+| ++++|++++.|++|++|
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~-~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iW 86 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQIL-IADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEE-EEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEE
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEE-EEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEE
Confidence 467899999999999999999999999999999998874321 223578999999999986 48999999999999999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC--CCEEEEecCCCeEEEEECCCCe---EEEEEeCCCcc
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK---LSLRILAHTVN 271 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--g~~l~t~s~d~~i~vwd~~~~~---~~~~~~~h~~~ 271 (279)
|++++....... +. +|...|.+++|+|+ +.+|++++.|++|++||++++. ....+.+|...
T Consensus 87 d~~~~~~~~~~~---------~~-----~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~ 152 (316)
T 3bg1_A 87 REENGTWEKSHE---------HA-----GHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG 152 (316)
T ss_dssp CCSSSCCCEEEE---------EC-----CCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSC
T ss_pred ECCCCcceEEEE---------cc-----CCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCC
Confidence 998865322211 11 26679999999998 8899999999999999998753 23556688888
Q ss_pred eeEEEe
Q 023642 272 IALWIT 277 (279)
Q Consensus 272 v~~v~~ 277 (279)
|+++..
T Consensus 153 v~~~~~ 158 (316)
T 3bg1_A 153 CNAVSW 158 (316)
T ss_dssp BCCCEE
T ss_pred cceEEE
Confidence 776643
No 56
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.89 E-value=2.7e-21 Score=165.40 Aligned_cols=159 Identities=11% Similarity=0.026 Sum_probs=130.4
Q ss_pred eccccceEeeeeecCCCCceee--CCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEE
Q 023642 100 SAADCCHMLSRYLPVNGPWPVD--QTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTS 176 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~--~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~ 176 (279)
.+.|+.+.+|++........+. +|...|.+++|+| ++++|++++.|+.|++||+... ..........|...|.+++
T Consensus 92 ~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~-~~~~~~~~~~~~~~v~~~~ 170 (383)
T 3ei3_B 92 GSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGS-VIQVFAKTDSWDYWYCCVD 170 (383)
T ss_dssp EEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSC-EEEEEECCCCSSCCEEEEE
T ss_pred EcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCC-ceEEEeccCCCCCCeEEEE
Confidence 4568899999987665555544 7999999999999 7899999999999999999964 4444333445667899999
Q ss_pred ECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCC-EEEEecCCCeEEEEE
Q 023642 177 LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYD 255 (279)
Q Consensus 177 ~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~t~s~d~~i~vwd 255 (279)
|+|++++|++++.|+.|++||++. +.... +. +|...|.+++|+|+++ +|++++.|+.|++||
T Consensus 171 ~~~~~~~l~~~~~d~~i~i~d~~~-~~~~~-----------~~-----~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd 233 (383)
T 3ei3_B 171 VSVSRQMLATGDSTGRLLLLGLDG-HEIFK-----------EK-----LHKAKVTHAEFNPRCDWLMATSSVDATVKLWD 233 (383)
T ss_dssp EETTTTEEEEEETTSEEEEEETTS-CEEEE-----------EE-----CSSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred ECCCCCEEEEECCCCCEEEEECCC-CEEEE-----------ec-----cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEe
Confidence 999999999999999999999953 32211 11 1566999999999999 899999999999999
Q ss_pred CCC----CeEEEEEeCCCcceeEEEe
Q 023642 256 LEA----NKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 256 ~~~----~~~~~~~~~h~~~v~~v~~ 277 (279)
+++ +.++..+ +|...|+++..
T Consensus 234 ~~~~~~~~~~~~~~-~~~~~v~~~~~ 258 (383)
T 3ei3_B 234 LRNIKDKNSYIAEM-PHEKPVNAAYF 258 (383)
T ss_dssp GGGCCSTTCEEEEE-ECSSCEEEEEE
T ss_pred CCCCCcccceEEEe-cCCCceEEEEE
Confidence 998 6777777 69999998865
No 57
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.88 E-value=1e-20 Score=157.10 Aligned_cols=184 Identities=14% Similarity=0.167 Sum_probs=136.8
Q ss_pred CCCCee-eccccceEeeeeecCCCCcee--eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeee-------
Q 023642 94 SGRGRF-SAADCCHMLSRYLPVNGPWPV--DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI------- 163 (279)
Q Consensus 94 ~~~~~~-~~~d~~~~~~~~~~~~~~~~l--~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~------- 163 (279)
++++.+ .+.|+++.+|+....+....+ .+|...|++++|+|++++|++|+.|++|++||+.+++++....
T Consensus 34 S~~~~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~ 113 (318)
T 4ggc_A 34 SSGNVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVG 113 (318)
T ss_dssp CTTSEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEE
T ss_pred CCCCEEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEE
Confidence 444433 456889999998766554444 4788899999999999999999999999999999886554321
Q ss_pred -------------------------------eccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeec----
Q 023642 164 -------------------------------LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN---- 208 (279)
Q Consensus 164 -------------------------------~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~---- 208 (279)
...+|...+..+.+++++++|++++.|+.|++||+++++......
T Consensus 114 ~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 193 (318)
T 4ggc_A 114 SLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFT 193 (318)
T ss_dssp EEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEEC
T ss_pred EeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeec
Confidence 123667789999999999999999999999999998765321110
Q ss_pred -cccccceeEEee-----------CCC----------------CCccccEEEEEEecCCCEEEEec--CCCeEEEEECCC
Q 023642 209 -VTEIHDGLDFSA-----------ADD----------------GGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEA 258 (279)
Q Consensus 209 -~~~~~~~~~~~~-----------~~~----------------~~~~~~v~~~~~sp~g~~l~t~s--~d~~i~vwd~~~ 258 (279)
.........+.+ ... ..+...+..+.|+|++..+++++ .|+.|++||+++
T Consensus 194 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~ 273 (318)
T 4ggc_A 194 QHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT 273 (318)
T ss_dssp CCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT
T ss_pred ccCCceEEEEecCCCCcEEEEEecCCCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCEEEEEECCC
Confidence 000000011111 000 12456788999999999887654 799999999999
Q ss_pred CeEEEEEeCCCcceeEEEe
Q 023642 259 NKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 259 ~~~~~~~~~h~~~v~~v~~ 277 (279)
++++.++.+|.+.|+++..
T Consensus 274 ~~~~~~l~gH~~~V~~l~~ 292 (318)
T 4ggc_A 274 MAKVAELKGHTSRVLSLTM 292 (318)
T ss_dssp CCEEEEECCCSSCEEEEEE
T ss_pred CcEEEEEcCCCCCEEEEEE
Confidence 9999999999999999875
No 58
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=4.9e-22 Score=174.90 Aligned_cols=155 Identities=12% Similarity=0.079 Sum_probs=118.9
Q ss_pred ceEeeeeecCCCCceee-CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCc-----ceEEEEEC
Q 023642 105 CHMLSRYLPVNGPWPVD-QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-----TVTDTSLS 178 (279)
Q Consensus 105 ~~~~~~~~~~~~~~~l~-~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----~v~~~~~s 178 (279)
....|+++..+....+. +|.+.|.+++|||||.+||+++.||.|++||... .+.. +. |.. .|.+++||
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~---l~-~~~~~~~~sv~svafS 138 (588)
T 2j04_A 65 FENKLDFELAQQNGLLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTN---LD-SKGNLSSRTYHCFEWN 138 (588)
T ss_dssp CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEE---CC-CSSCSTTTCEEEEEEC
T ss_pred CcceEEEEeCCCceEeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeee---cc-CCCccccccEEEEEEc
Confidence 44556666655555554 6789999999999999999999999999999554 3322 23 443 49999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCcee-----eeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEE
Q 023642 179 PDQRHLVYASMSPIVHIVDVGSGTME-----SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYV 253 (279)
Q Consensus 179 p~~~~l~~~~~d~~i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~v 253 (279)
|||++|++|+.||+|+|||+.++... .+. .+..+. .+|..+|.+++|+||| +++++.|++|++
T Consensus 139 PDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~---------ti~~~~-~gh~~~V~sVawSPdg--Laass~D~tVrl 206 (588)
T 2j04_A 139 PIESSIVVGNEDGELQFFSIRKNSENTPEFYFES---------SIRLSD-AGSKDWVTHIVWYEDV--LVAALSNNSVFS 206 (588)
T ss_dssp SSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEE---------EEECSC-TTCCCCEEEEEEETTE--EEEEETTCCEEE
T ss_pred CCCCEEEEEcCCCEEEEEECCCCccccccceeee---------eeeccc-ccccccEEEEEEcCCc--EEEEeCCCeEEE
Confidence 99999999999999999999987530 111 121111 2367799999999999 788888999999
Q ss_pred EECCCCe---EEEEEe-CCCcceeEEEe
Q 023642 254 YDLEANK---LSLRIL-AHTVNIALWIT 277 (279)
Q Consensus 254 wd~~~~~---~~~~~~-~h~~~v~~v~~ 277 (279)
||+.+++ ..+++. +|...|.++..
T Consensus 207 Wd~~~~~~~~~~~tL~~~h~~~V~svaF 234 (588)
T 2j04_A 207 MTVSASSHQPVSRMIQNASRRKITDLKI 234 (588)
T ss_dssp ECCCSSSSCCCEEEEECCCSSCCCCEEE
T ss_pred EECCCCccccceeeecccccCcEEEEEE
Confidence 9998877 346774 88888888764
No 59
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.88 E-value=4e-21 Score=163.02 Aligned_cols=180 Identities=13% Similarity=0.053 Sum_probs=136.1
Q ss_pred cCCCCee---eccccceEeeeeecCCCC--ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEee-eeecc
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGP--WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQK-DILAK 166 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~--~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~ 166 (279)
+++++.+ .+.|+.+.+|++...... ..+..|...|.+++|+|++++|++++.|+.|++||+..+..... .....
T Consensus 60 ~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~ 139 (372)
T 1k8k_C 60 WAPDSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKK 139 (372)
T ss_dssp EETTTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECT
T ss_pred EeCCCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeec
Confidence 3444443 456888999998655422 23477999999999999999999999999999999987752111 12235
Q ss_pred CCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeec-------cccccceeEEeeCCCCCccccEEEEEEecCC
Q 023642 167 SLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN-------VTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239 (279)
Q Consensus 167 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 239 (279)
.|...|.+++|+|++++|++++.|+.|++||++......... ......-..+. +|...|.+++|+|++
T Consensus 140 ~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~~ 214 (372)
T 1k8k_C 140 PIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-----SSCGWVHGVCFSANG 214 (372)
T ss_dssp TCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-----CCSSCEEEEEECSSS
T ss_pred ccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-----CCCCeEEEEEECCCC
Confidence 788899999999999999999999999999975322100000 00000000111 266699999999999
Q ss_pred CEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 240 ~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
++|++++.|+.|++||+++++++..+.+|...|+++..
T Consensus 215 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 252 (372)
T 1k8k_C 215 SRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTF 252 (372)
T ss_dssp SEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEE
T ss_pred CEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEE
Confidence 99999999999999999999999999999999988764
No 60
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.88 E-value=5.3e-21 Score=164.73 Aligned_cols=183 Identities=16% Similarity=0.206 Sum_probs=138.2
Q ss_pred ccCCCCe-e---eccccceEeeee----ecCCC------CceeeC----------CCCCeEEEEECCCCCEEEEEeCCCc
Q 023642 92 NYSGRGR-F---SAADCCHMLSRY----LPVNG------PWPVDQ----------TTSRAYVSQFSADGSLFVAGFQASQ 147 (279)
Q Consensus 92 ~~~~~~~-~---~~~d~~~~~~~~----~~~~~------~~~l~~----------h~~~V~~~~~spd~~~l~s~~~d~~ 147 (279)
.+++++. + .+.|+.+.+|++ ..... ...+.. |.+.|++++|+|++++|++|+.|+.
T Consensus 52 ~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~ 131 (425)
T 1r5m_A 52 TWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGE 131 (425)
T ss_dssp EECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSC
T ss_pred EECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCe
Confidence 4566655 3 456788999998 44441 222333 6889999999999999999999999
Q ss_pred EEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccc---------------
Q 023642 148 IRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEI--------------- 212 (279)
Q Consensus 148 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~--------------- 212 (279)
|++|| .++..+.. +..|...|.+++|+|++++|++++.|+.|++||+.+++..........
T Consensus 132 i~i~~-~~~~~~~~---~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (425)
T 1r5m_A 132 LRLWN-KTGALLNV---LNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGS 207 (425)
T ss_dssp EEEEE-TTSCEEEE---ECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---------------CC
T ss_pred EEEEe-CCCCeeee---ccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcc
Confidence 99999 44544443 467888999999999999999999999999999998876443322211
Q ss_pred -cceeEEeeCCC------------------------CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 213 -HDGLDFSAADD------------------------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 213 -~~~~~~~~~~~------------------------~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
...+.+.+.+. .+|...|.+++|+|++++|++++.|+.|++||+++++++..+.+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~ 287 (425)
T 1r5m_A 208 LGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNCFYG 287 (425)
T ss_dssp CBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEEECC
T ss_pred eeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceEecC
Confidence 11111111110 34778999999999999999999999999999999999999999
Q ss_pred CCcceeEEEee
Q 023642 268 HTVNIALWITC 278 (279)
Q Consensus 268 h~~~v~~v~~~ 278 (279)
|...|.++..+
T Consensus 288 ~~~~i~~~~~~ 298 (425)
T 1r5m_A 288 HSQSIVSASWV 298 (425)
T ss_dssp CSSCEEEEEEE
T ss_pred CCccEEEEEEC
Confidence 99999888653
No 61
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.88 E-value=7.1e-21 Score=163.12 Aligned_cols=175 Identities=14% Similarity=0.113 Sum_probs=136.9
Q ss_pred eccccceEeeeeec------CCCCc-----ee-------eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEee
Q 023642 100 SAADCCHMLSRYLP------VNGPW-----PV-------DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQK 161 (279)
Q Consensus 100 ~~~d~~~~~~~~~~------~~~~~-----~l-------~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~ 161 (279)
.+.++.+.+|++.. ..... .+ ..|...|.+++|+|++ +|++++.|+.|++||+.+++.+..
T Consensus 144 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~ 222 (397)
T 1sq9_A 144 TDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYN 222 (397)
T ss_dssp EETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEE
T ss_pred EeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEE
Confidence 35688899999987 55554 56 4589999999999999 999999999999999999877665
Q ss_pred eeeccCC---CcceEEEEECCCCCEEEEEeCC---CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEE
Q 023642 162 DILAKSL---RWTVTDTSLSPDQRHLVYASMS---PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF 235 (279)
Q Consensus 162 ~~~~~~~---~~~v~~~~~sp~~~~l~~~~~d---~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 235 (279)
.....+| ...|.+++|+|++++|++++.| +.|++||+++++............. .... ...|...|.+++|
T Consensus 223 ~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~v~~~~~ 299 (397)
T 1sq9_A 223 FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQ-ASLG--EFAHSSWVMSLSF 299 (397)
T ss_dssp EECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC---------C--CBSBSSCEEEEEE
T ss_pred EeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCccccc-cccc--ccccCCcEEEEEE
Confidence 3221227 8899999999999999999999 9999999998876433221000000 0000 0015568999999
Q ss_pred ecCCCEEEEecCCCeEEEEECCCCeEEEEEe------CC---------------CcceeEEEee
Q 023642 236 STDGRELVAGSSDDCIYVYDLEANKLSLRIL------AH---------------TVNIALWITC 278 (279)
Q Consensus 236 sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~------~h---------------~~~v~~v~~~ 278 (279)
+|++++|++++.|+.|++||+++++++..+. +| ...|+++...
T Consensus 300 ~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~ 363 (397)
T 1sq9_A 300 NDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFL 363 (397)
T ss_dssp CSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEE
T ss_pred CCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEec
Confidence 9999999999999999999999999999999 88 8999888653
No 62
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.88 E-value=7e-21 Score=160.98 Aligned_cols=176 Identities=16% Similarity=0.121 Sum_probs=141.9
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
+++++.+ .+.|+.+.+|++........+.+|...|.+++|+|++++|++++.|+.|++||+.+++.+... .+.
T Consensus 40 ~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~----~~~ 115 (369)
T 3zwl_B 40 YNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATW----KSP 115 (369)
T ss_dssp ECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEE----ECS
T ss_pred EcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe----ecC
Confidence 5666654 456888999998777666778999999999999999999999999999999999999776653 267
Q ss_pred cceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccc--cEEEEEEecCCCEE
Q 023642 170 WTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSF--GIFSLKFSTDGREL 242 (279)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~sp~g~~l 242 (279)
..|.+++|+|++++|++++.+ +.|++||+...................+.. |.. .+.+++|+|++++|
T Consensus 116 ~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~l 190 (369)
T 3zwl_B 116 VPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIIT-----HEGLDAATVAGWSTKGKYI 190 (369)
T ss_dssp SCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEEC-----CTTCCCEEEEEECGGGCEE
T ss_pred CCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccC-----CcCccceeEEEEcCCCCEE
Confidence 789999999999999999999 999999998765422111111111111111 233 89999999999999
Q ss_pred EEecCCCeEEEEECCC-CeEEEEEeCCCcceeEEEe
Q 023642 243 VAGSSDDCIYVYDLEA-NKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 243 ~t~s~d~~i~vwd~~~-~~~~~~~~~h~~~v~~v~~ 277 (279)
++++.|+.|++||+++ ++.+..+.+|...|.++..
T Consensus 191 ~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~ 226 (369)
T 3zwl_B 191 IAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQF 226 (369)
T ss_dssp EEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEE
T ss_pred EEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEE
Confidence 9999999999999998 8999999999999998865
No 63
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=4.7e-22 Score=177.03 Aligned_cols=162 Identities=6% Similarity=-0.017 Sum_probs=130.1
Q ss_pred eccccceEeeeeecCCC-----------CceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCC
Q 023642 100 SAADCCHMLSRYLPVNG-----------PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL 168 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~-----------~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (279)
.+.|+.+.+|++..... ...+.+|...|++++|+|++ .|++|+.||+|++||+.++.... ..+..|
T Consensus 231 ~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~--~~~~~H 307 (524)
T 2j04_B 231 VSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPS--FYDQVH 307 (524)
T ss_dssp EETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCS--EEEECS
T ss_pred EecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCce--EEeecc
Confidence 46788999999864321 13578899999999999864 89999999999999998764322 124689
Q ss_pred CcceEEE--EECCCC-CEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEe
Q 023642 169 RWTVTDT--SLSPDQ-RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG 245 (279)
Q Consensus 169 ~~~v~~~--~~sp~~-~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~ 245 (279)
...|.++ +|+|++ .+|++++.|++|+|||+++++.... +.++. ....|.+++|+|+++.|+++
T Consensus 308 ~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~-----------~~~~~---~~~~v~~v~fsp~~~~l~s~ 373 (524)
T 2j04_B 308 DSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKT-----------TVSRF---RGSNLVPVVYCPQIYSYIYS 373 (524)
T ss_dssp SSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCE-----------EEEEC---SCCSCCCEEEETTTTEEEEE
T ss_pred cccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccc-----------ccccc---ccCcccceEeCCCcCeEEEe
Confidence 9999999 578888 8999999999999999988664221 11111 00147889999999999999
Q ss_pred cCCCeEEEEECCCCeEEEEEeCCCcceeEEEee
Q 023642 246 SSDDCIYVYDLEANKLSLRILAHTVNIALWITC 278 (279)
Q Consensus 246 s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~~ 278 (279)
+.|++|++||++++.++.++.+|...|++|..+
T Consensus 374 ~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~S 406 (524)
T 2j04_B 374 DGASSLRAVPSRAAFAVHPLVSRETTITAIGVS 406 (524)
T ss_dssp CSSSEEEEEETTCTTCCEEEEECSSCEEEEECC
T ss_pred CCCCcEEEEECcccccceeeecCCCceEEEEeC
Confidence 999999999999999989999999999998753
No 64
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.88 E-value=6.6e-21 Score=164.27 Aligned_cols=159 Identities=19% Similarity=0.229 Sum_probs=134.5
Q ss_pred eccccceEeeeeecCCCCceeeC-CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEEC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQ-TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~-h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (279)
.+.++.+.+|+.........+.. |...|.+++|+|++++|++|+.|+.|++||+.+++.+.. +..|...|.+++|
T Consensus 109 ~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~---~~~~~~~v~~~~~- 184 (401)
T 4aez_A 109 VALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRT---MAGHQARVGCLSW- 184 (401)
T ss_dssp EEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEE-
T ss_pred EECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEE---ecCCCCceEEEEE-
Confidence 56788899999876655555544 899999999999999999999999999999999876654 4588899999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCC
Q 023642 179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA 258 (279)
Q Consensus 179 p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~ 258 (279)
++.+|++++.|+.|++||++....... .+. +|...|.+++|+|++++|++++.|+.|++||+++
T Consensus 185 -~~~~l~~~~~dg~i~i~d~~~~~~~~~----------~~~-----~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 185 -NRHVLSSGSRSGAIHHHDVRIANHQIG----------TLQ-----GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp -ETTEEEEEETTSEEEEEETTSSSCEEE----------EEE-----CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred -CCCEEEEEcCCCCEEEEecccCcceee----------EEc-----CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence 567999999999999999985432111 111 2666999999999999999999999999999999
Q ss_pred CeEEEEEeCCCcceeEEEee
Q 023642 259 NKLSLRILAHTVNIALWITC 278 (279)
Q Consensus 259 ~~~~~~~~~h~~~v~~v~~~ 278 (279)
++++..+.+|...|.++..+
T Consensus 249 ~~~~~~~~~~~~~v~~~~~~ 268 (401)
T 4aez_A 249 SIPKFTKTNHNAAVKAVAWC 268 (401)
T ss_dssp SSEEEEECCCSSCCCEEEEC
T ss_pred CCccEEecCCcceEEEEEEC
Confidence 99999999999999988754
No 65
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.88 E-value=6.5e-22 Score=172.47 Aligned_cols=143 Identities=15% Similarity=0.178 Sum_probs=118.2
Q ss_pred eeeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC-CCCEEEEEeCCCeEEEE
Q 023642 119 PVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIV 196 (279)
Q Consensus 119 ~l~~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~ 196 (279)
....|...|++++|+| ++++||+|+.||.|+|||+.++..... ..+.+|.+.|++++|+| ++.+|++++.|++|++|
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~-~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iw 192 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTF-IKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQ 192 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEE-ECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEE
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeE-EEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEe
Confidence 4577899999999999 677999999999999999987754322 33568999999999998 68999999999999999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEE
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~ 276 (279)
|++++........ . .+...+.+++|+|++++|++|+.|+.|++||++ ++.+.++.+|...|+++.
T Consensus 193 d~~~~~~~~~~~~------------~--~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~ 257 (435)
T 4e54_B 193 DFKGNILRVFASS------------D--TINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVA 257 (435)
T ss_dssp ETTSCEEEEEECC------------S--SCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEE
T ss_pred eccCCceeEEecc------------C--CCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeee
Confidence 9987654322211 0 133467899999999999999999999999996 567788999999999886
Q ss_pred e
Q 023642 277 T 277 (279)
Q Consensus 277 ~ 277 (279)
.
T Consensus 258 ~ 258 (435)
T 4e54_B 258 L 258 (435)
T ss_dssp E
T ss_pred e
Confidence 4
No 66
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.88 E-value=2.1e-21 Score=162.72 Aligned_cols=149 Identities=19% Similarity=0.186 Sum_probs=116.8
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
.+.|..+.+|++........+.+|.+.|++++|+|++++|++|+.|+.|++||+.+.+.+... .+...|..+.|+|
T Consensus 191 ~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~----~~~~~v~~~~~~~ 266 (340)
T 4aow_A 191 CGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL----DGGDIINALCFSP 266 (340)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE----ECSSCEEEEEECS
T ss_pred EcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee----cCCceEEeeecCC
Confidence 456778888888766666678899999999999999999999999999999999998776542 3345799999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
++.++ +++.|+.|++||++++........... .....+|...|++++|+|+|++|++|+.|+.|+|||+++|
T Consensus 267 ~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~-------~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tG 338 (340)
T 4aow_A 267 NRYWL-CAATGPSIKIWDLEGKIIVDELKQEVI-------STSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIG 338 (340)
T ss_dssp SSSEE-EEEETTEEEEEETTTTEEEEEECCC--------------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC-
T ss_pred CCcee-eccCCCEEEEEECCCCeEEEeccccce-------eeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCc
Confidence 87655 556789999999998776432221110 0011236779999999999999999999999999999988
Q ss_pred e
Q 023642 260 K 260 (279)
Q Consensus 260 ~ 260 (279)
+
T Consensus 339 t 339 (340)
T 4aow_A 339 T 339 (340)
T ss_dssp -
T ss_pred C
Confidence 5
No 67
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.88 E-value=1.6e-21 Score=164.87 Aligned_cols=178 Identities=14% Similarity=0.118 Sum_probs=138.4
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEEC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (279)
.+.|+.+.+|++........+.+|...|.+++|+| ++.+|++++.|+.|++||+.+++..........|...|.+++|+
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 170 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYD 170 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEEC
T ss_pred ecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEEC
Confidence 46788899998877666667889999999999999 99999999999999999999997766543336889999999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceeeeec-----------------------------cccccce------eEEeeCCC
Q 023642 179 PDQRHLVYASMSPIVHIVDVGSGTMESLAN-----------------------------VTEIHDG------LDFSAADD 223 (279)
Q Consensus 179 p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----------------------------~~~~~~~------~~~~~~~~ 223 (279)
|++++|++++.|+.|++||+++++...... ....... ..+.+..+
T Consensus 171 ~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 250 (366)
T 3k26_A 171 LLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLILSKSCE 250 (366)
T ss_dssp TTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEEEEECSS
T ss_pred CCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEEEEEecC
Confidence 999999999999999999998764321110 0000000 00001000
Q ss_pred -------------------------------CCccccEEEEEEecC--CCEEEEecCCCeEEEEECCCCe----EEEEEe
Q 023642 224 -------------------------------GGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANK----LSLRIL 266 (279)
Q Consensus 224 -------------------------------~~~~~~v~~~~~sp~--g~~l~t~s~d~~i~vwd~~~~~----~~~~~~ 266 (279)
.+|...|.+++|+|+ +++|++++.|+.|++||+.+++ ....+.
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~ 330 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLT 330 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEEC
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEc
Confidence 225567888999999 9999999999999999999875 556888
Q ss_pred CC--CcceeEEEe
Q 023642 267 AH--TVNIALWIT 277 (279)
Q Consensus 267 ~h--~~~v~~v~~ 277 (279)
+| ...|+++..
T Consensus 331 ~~~~~~~v~~~~~ 343 (366)
T 3k26_A 331 HHKCGAAIRQTSF 343 (366)
T ss_dssp CTTCCSCEEEEEE
T ss_pred ccccCCceEEEEe
Confidence 88 788888865
No 68
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.87 E-value=4.9e-21 Score=166.55 Aligned_cols=158 Identities=14% Similarity=0.171 Sum_probs=120.7
Q ss_pred ee-eCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCC---CeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeE
Q 023642 119 PV-DQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVER---GWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIV 193 (279)
Q Consensus 119 ~l-~~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i 193 (279)
.+ .+|.+.|++++|+| ++++|++|+.|++|++||+.+ +....... ...|...|.+++|+|++.+|++++.|+.|
T Consensus 57 ~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~-~~~h~~~v~~~~~~~~~~~l~s~s~dg~i 135 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSL-TYDCSSTVTQITMIPNFDAFAVSSKDGQI 135 (437)
T ss_dssp EECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSE-EEECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceee-eccCCCCEEEEEEeCCCCEEEEEeCCCEE
Confidence 35 78999999999999 999999999999999999976 43221111 12588899999999999999999999999
Q ss_pred EEEECC---CCceeeeeccc--------c---------------ccceeEEeeCCC-----------------CC--ccc
Q 023642 194 HIVDVG---SGTMESLANVT--------E---------------IHDGLDFSAADD-----------------GG--YSF 228 (279)
Q Consensus 194 ~i~d~~---~~~~~~~~~~~--------~---------------~~~~~~~~~~~~-----------------~~--~~~ 228 (279)
++||+. .++........ . ......+.+..+ .+ |..
T Consensus 136 ~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~ 215 (437)
T 3gre_A 136 IVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG 215 (437)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC
T ss_pred EEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC
Confidence 999994 33332111100 0 000111111111 22 778
Q ss_pred cEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe-CCCcceeEEEe
Q 023642 229 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL-AHTVNIALWIT 277 (279)
Q Consensus 229 ~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~-~h~~~v~~v~~ 277 (279)
.|.+++|+|++++|++++.|++|++||+++++++.++. +|...|+++..
T Consensus 216 ~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~ 265 (437)
T 3gre_A 216 AVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEV 265 (437)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEE
T ss_pred ceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEe
Confidence 99999999999999999999999999999999999987 78888888754
No 69
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.87 E-value=1.1e-20 Score=162.82 Aligned_cols=169 Identities=13% Similarity=0.121 Sum_probs=133.2
Q ss_pred cCC-CCee---eccccceEeeeeecC-------CCCceeeCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCeEEe
Q 023642 93 YSG-RGRF---SAADCCHMLSRYLPV-------NGPWPVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQ 160 (279)
Q Consensus 93 ~~~-~~~~---~~~d~~~~~~~~~~~-------~~~~~l~~h~~~V~~~~~spd~-~~l~s~~~d~~i~iwd~~~~~~~~ 160 (279)
+++ ++.+ .+.|+.+.+|++... .....+.+|...|.+++|+|++ .+|++++.|+.|++||+.+++.+.
T Consensus 89 ~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~ 168 (402)
T 2aq5_A 89 WCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVL 168 (402)
T ss_dssp ECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred eCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccE
Confidence 455 4443 456889999998776 3456689999999999999998 699999999999999999997665
Q ss_pred eeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccc-cEEEEEEecCC
Q 023642 161 KDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSF-GIFSLKFSTDG 239 (279)
Q Consensus 161 ~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~sp~g 239 (279)
.. ....|...|.+++|+|++++|++++.|+.|++||+++++...... .+ |.+ .+.++.|+|++
T Consensus 169 ~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~----------~~-----~~~~~~~~~~~~~~~ 232 (402)
T 2aq5_A 169 TL-GPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKD----------RP-----HEGTRPVHAVFVSEG 232 (402)
T ss_dssp EE-CTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEE----------CS-----SCSSSCCEEEECSTT
T ss_pred EE-ecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeec----------cC-----CCCCcceEEEEcCCC
Confidence 42 115788899999999999999999999999999999987643221 01 333 38899999999
Q ss_pred CEEEEe---cCCCeEEEEECCCCeE-EEEEe-CCCcceeEEEe
Q 023642 240 RELVAG---SSDDCIYVYDLEANKL-SLRIL-AHTVNIALWIT 277 (279)
Q Consensus 240 ~~l~t~---s~d~~i~vwd~~~~~~-~~~~~-~h~~~v~~v~~ 277 (279)
++|++| +.|+.|++||+++++. +.... .|...|.++..
T Consensus 233 ~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~ 275 (402)
T 2aq5_A 233 KILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFF 275 (402)
T ss_dssp EEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEE
T ss_pred cEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEE
Confidence 999999 7899999999988653 33333 46666666543
No 70
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.87 E-value=3.9e-21 Score=160.86 Aligned_cols=141 Identities=11% Similarity=0.056 Sum_probs=110.1
Q ss_pred ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEE-eeeeeccCCCcceEEEEECC--CCCEEEEEeCCCeEE
Q 023642 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI-QKDILAKSLRWTVTDTSLSP--DQRHLVYASMSPIVH 194 (279)
Q Consensus 118 ~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~sp--~~~~l~~~~~d~~i~ 194 (279)
..+.+|.+.|++++|+|++++|++|+.|+.|++||+.++... .....+.+|...|.+++|+| ++++|++++.|+.|+
T Consensus 5 ~~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~ 84 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVK 84 (351)
T ss_dssp CEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred ccCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEE
Confidence 457899999999999999999999999999999999876321 12223568999999999999 699999999999999
Q ss_pred EEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC--CCEEEEecCCCeEEEEECCCCeEEEEE
Q 023642 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEANKLSLRI 265 (279)
Q Consensus 195 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--g~~l~t~s~d~~i~vwd~~~~~~~~~~ 265 (279)
+||+.++........ ......+. +|...|.+++|+|+ +.+|++++.|+.|++||+++++.+..+
T Consensus 85 vwd~~~~~~~~~~~~--~~~~~~~~-----~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 150 (351)
T 3f3f_A 85 LWEEDPDQEECSGRR--WNKLCTLN-----DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSW 150 (351)
T ss_dssp EEEECTTSCTTSSCS--EEEEEEEC-----CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCC
T ss_pred EEecCCCcccccccC--cceeeeec-----ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccc
Confidence 999988753110000 00000111 26669999999999 999999999999999999887654433
No 71
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.87 E-value=6.9e-21 Score=161.74 Aligned_cols=146 Identities=16% Similarity=0.076 Sum_probs=120.8
Q ss_pred CceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCC--CCEEEEEeCCCeEE
Q 023642 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIVH 194 (279)
Q Consensus 117 ~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~i~ 194 (279)
...+.+|.+.|++++|+|++++|++|+.|+.|++||+..+... ....+..|...|++++|+|+ +++|++++.|+.|+
T Consensus 4 ~~~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~-~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~ 82 (379)
T 3jrp_A 4 VVIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK-LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 82 (379)
T ss_dssp -CCEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE-EEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEE
T ss_pred cEEecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcce-eeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEE
Confidence 3468899999999999999999999999999999999844221 22235689999999999987 99999999999999
Q ss_pred EEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC--CCEEEEecCCCeEEEEECCCC--eEEEEEeCCCc
Q 023642 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEAN--KLSLRILAHTV 270 (279)
Q Consensus 195 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--g~~l~t~s~d~~i~vwd~~~~--~~~~~~~~h~~ 270 (279)
+||+.+++....... . +|...|.+++|+|+ +.+|++++.|+.|++||++++ .....+.+|..
T Consensus 83 iwd~~~~~~~~~~~~---------~-----~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~ 148 (379)
T 3jrp_A 83 IWKEENGRWSQIAVH---------A-----VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI 148 (379)
T ss_dssp EEEEETTEEEEEEEE---------C-----CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT
T ss_pred EEEcCCCceeEeeee---------c-----CCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC
Confidence 999998863222211 1 15569999999999 999999999999999999887 35567788999
Q ss_pred ceeEEEe
Q 023642 271 NIALWIT 277 (279)
Q Consensus 271 ~v~~v~~ 277 (279)
.|+++..
T Consensus 149 ~v~~~~~ 155 (379)
T 3jrp_A 149 GVNSASW 155 (379)
T ss_dssp CEEEEEE
T ss_pred ceEEEEE
Confidence 9988865
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.87 E-value=6.3e-21 Score=165.98 Aligned_cols=176 Identities=13% Similarity=0.133 Sum_probs=132.9
Q ss_pred ccCCCCee---eccccceEeeeeecCCC-----------CceeeCCC------------CCeEEEEECCCC--CEEEEEe
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNG-----------PWPVDQTT------------SRAYVSQFSADG--SLFVAGF 143 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~-----------~~~l~~h~------------~~V~~~~~spd~--~~l~s~~ 143 (279)
.+++++.+ ++.|+.+.+|++..... ...+.+|. +.|++++|+|++ .+|++++
T Consensus 35 ~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s 114 (447)
T 3dw8_B 35 EFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLST 114 (447)
T ss_dssp EECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeC
Confidence 35666654 45788999999876552 34578998 889999999998 8999999
Q ss_pred CCCcEEEEEcCCCeEEe-------------------------------------eeeeccCCCcceEEEEECCCCCEEEE
Q 023642 144 QASQIRIYDVERGWKIQ-------------------------------------KDILAKSLRWTVTDTSLSPDQRHLVY 186 (279)
Q Consensus 144 ~d~~i~iwd~~~~~~~~-------------------------------------~~~~~~~~~~~v~~~~~sp~~~~l~~ 186 (279)
.|+.|++||+.++.... ......+|...|.+++|+|++++|++
T Consensus 115 ~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 194 (447)
T 3dw8_B 115 NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLS 194 (447)
T ss_dssp CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEE
T ss_pred CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEE
Confidence 99999999997653311 00123578999999999999999999
Q ss_pred EeCCCeEEEEECCCCc-eeeeeccccccceeEEeeCCCCCccccEEEEEEecCC-CEEEEecCCCeEEEEECCCCeE---
Q 023642 187 ASMSPIVHIVDVGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKL--- 261 (279)
Q Consensus 187 ~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g-~~l~t~s~d~~i~vwd~~~~~~--- 261 (279)
+ .|+.|++||+.... ......... ..-.+|...|.+++|+|++ .+|++++.|+.|++||+++++.
T Consensus 195 ~-~d~~i~iwd~~~~~~~~~~~~~~~---------~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~ 264 (447)
T 3dw8_B 195 A-DDLRINLWHLEITDRSFNIVDIKP---------ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDR 264 (447)
T ss_dssp E-CSSEEEEEETTEEEEEEEEEECCC---------SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCT
T ss_pred e-CCCeEEEEECCCCCceeeeeeccc---------ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccc
Confidence 8 79999999998433 222111000 0011266799999999998 9999999999999999999887
Q ss_pred -EEEEeCCCc------------ceeEEEe
Q 023642 262 -SLRILAHTV------------NIALWIT 277 (279)
Q Consensus 262 -~~~~~~h~~------------~v~~v~~ 277 (279)
+..+.+|.. .|+++..
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 293 (447)
T 3dw8_B 265 HSKLFEEPEDPSNRSFFSEIISSISDVKF 293 (447)
T ss_dssp TCEEECCC-----CCHHHHHTTCEEEEEE
T ss_pred eeeEeccCCCccccccccccCceEEEEEE
Confidence 788998886 7887764
No 73
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.87 E-value=9.9e-22 Score=169.22 Aligned_cols=173 Identities=10% Similarity=0.032 Sum_probs=115.3
Q ss_pred eccccceEeeeeecCCCC-----ceeeCCCCCeEEEEECC--------CCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc
Q 023642 100 SAADCCHMLSRYLPVNGP-----WPVDQTTSRAYVSQFSA--------DGSLFVAGFQASQIRIYDVERGWKIQKDILAK 166 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~-----~~l~~h~~~V~~~~~sp--------d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (279)
.+.|+++.+|+....... ..+.+|.+.|++++|+| |+++|++|+.|++|+|||+.++.+... ..
T Consensus 107 ~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~---~~ 183 (393)
T 4gq1_A 107 VCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILA---GY 183 (393)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEE---EE
T ss_pred EeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeee---ec
Confidence 567899999998765322 23689999999999998 889999999999999999988766544 34
Q ss_pred CCCcceEEEEECCCCC-EEEEEeCCCeEEEEECCCCceeeeecc-ccccceeEEeeC--------CCCCccccEEEEEEe
Q 023642 167 SLRWTVTDTSLSPDQR-HLVYASMSPIVHIVDVGSGTMESLANV-TEIHDGLDFSAA--------DDGGYSFGIFSLKFS 236 (279)
Q Consensus 167 ~~~~~v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~--------~~~~~~~~v~~~~~s 236 (279)
.|..+|.+++|+|++. +|++++.|++|++||+++++....... ........+... ...+|...+.++.|+
T Consensus 184 ~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~ 263 (393)
T 4gq1_A 184 PLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWI 263 (393)
T ss_dssp ECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEE
T ss_pred CCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeee
Confidence 6777899999999874 799999999999999998765322111 000000001100 113577789999997
Q ss_pred -cCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEE
Q 023642 237 -TDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALW 275 (279)
Q Consensus 237 -p~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v 275 (279)
|+++.|++++.|+++++||+.+++....+..|...+..+
T Consensus 264 ~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~ 303 (393)
T 4gq1_A 264 GSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPK 303 (393)
T ss_dssp TTTTCEEEEECTTSEEEEEEC-------------------
T ss_pred cCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccE
Confidence 799999999999999999999998888888877665543
No 74
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.87 E-value=1.3e-20 Score=163.96 Aligned_cols=165 Identities=13% Similarity=0.119 Sum_probs=133.2
Q ss_pred eccccceEeeeeec----------CCCCceeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeE----Eeeeee
Q 023642 100 SAADCCHMLSRYLP----------VNGPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWK----IQKDIL 164 (279)
Q Consensus 100 ~~~d~~~~~~~~~~----------~~~~~~l~~h~~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~~----~~~~~~ 164 (279)
.+.++.+.+|++.. ......+.+|...|++++|+|++. +|++|+.||.|++||+..+.. +.....
T Consensus 147 ~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~ 226 (430)
T 2xyi_A 147 KTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNI 226 (430)
T ss_dssp ECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEE
T ss_pred ECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceecccee
Confidence 45678899999876 344556889999999999999988 999999999999999987422 222234
Q ss_pred ccCCCcceEEEEECC-CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCC-EE
Q 023642 165 AKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-EL 242 (279)
Q Consensus 165 ~~~~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l 242 (279)
+..|...|.+++|+| ++.+|++++.|+.|++||++++....... .+.. |...|++++|+|+++ +|
T Consensus 227 ~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~--------~~~~-----~~~~v~~i~~~p~~~~~l 293 (430)
T 2xyi_A 227 FTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSH--------TVDA-----HTAEVNCLSFNPYSEFIL 293 (430)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSE--------EEEC-----CSSCEEEEEECSSCTTEE
T ss_pred ecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCccee--------Eeec-----CCCCeEEEEeCCCCCCEE
Confidence 568888999999999 67889999999999999999864111100 1111 556899999999987 68
Q ss_pred EEecCCCeEEEEECCC-CeEEEEEeCCCcceeEEEe
Q 023642 243 VAGSSDDCIYVYDLEA-NKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 243 ~t~s~d~~i~vwd~~~-~~~~~~~~~h~~~v~~v~~ 277 (279)
++|+.|+.|++||+++ +.++..+.+|...|.++..
T Consensus 294 ~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~ 329 (430)
T 2xyi_A 294 ATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQW 329 (430)
T ss_dssp EEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEE
T ss_pred EEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEE
Confidence 8999999999999998 6788999999999998865
No 75
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.87 E-value=8.6e-21 Score=157.52 Aligned_cols=159 Identities=10% Similarity=0.005 Sum_probs=115.9
Q ss_pred ccceEeeeeecC-CCCceeeCCCCCeEEEEECC---CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEEC
Q 023642 103 DCCHMLSRYLPV-NGPWPVDQTTSRAYVSQFSA---DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (279)
Q Consensus 103 d~~~~~~~~~~~-~~~~~l~~h~~~V~~~~~sp---d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (279)
++.+.+|.+.+. +....+.+|...++.++|+| ++.+|++|+.|++|+|||+.+++++..+.....+...+.+++|+
T Consensus 156 d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafS 235 (356)
T 2w18_A 156 DQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYS 235 (356)
T ss_dssp TCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEE
T ss_pred CCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEEC
Confidence 778888887553 33344678888888888888 77899999999999999999998877643212223467888999
Q ss_pred CCCCEE------------EEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec
Q 023642 179 PDQRHL------------VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (279)
Q Consensus 179 p~~~~l------------~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s 246 (279)
|+|.++ ++|+.|+++++||..+++........ + ..+|...+.+..++ +.++++++
T Consensus 236 pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~-------~----p~Gh~~~~lsg~~s--g~~lASgS 302 (356)
T 2w18_A 236 EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYC-------L----PPGQAGRFLEGDVK--DHCAAAIL 302 (356)
T ss_dssp ETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEEC-------C----CTTCCCCEEEEEEE--TTEEEEEE
T ss_pred CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEee-------c----cCCCcceeEccccC--CCEEEEEc
Confidence 999886 56788999999999998865422110 1 11244445444444 88999999
Q ss_pred CCCeEEEEECCCCeEEEEEeCCCcceeE
Q 023642 247 SDDCIYVYDLEANKLSLRILAHTVNIAL 274 (279)
Q Consensus 247 ~d~~i~vwd~~~~~~~~~~~~h~~~v~~ 274 (279)
.|++|+|||+.++++++++.+|...+.+
T Consensus 303 ~DgTIkIWDl~tGk~l~tL~gH~~~vvs 330 (356)
T 2w18_A 303 TSGTIAIWDLLLGQCTALLPPVSDQHWS 330 (356)
T ss_dssp TTSCEEEEETTTCSEEEEECCC--CCCC
T ss_pred CCCcEEEEECCCCcEEEEecCCCCCeEE
Confidence 9999999999999999999999887654
No 76
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.87 E-value=1.6e-20 Score=160.50 Aligned_cols=143 Identities=13% Similarity=0.173 Sum_probs=121.5
Q ss_pred eeeCCCCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC-CCCEEEEEeCCCeEEEE
Q 023642 119 PVDQTTSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVHIV 196 (279)
Q Consensus 119 ~l~~h~~~V~~~~~spd~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~ 196 (279)
.+.+|...|++++|+|++ ++|++|+.|+.|++||+.++..... ....+|...|.+++|+| ++++|++++.|+.|++|
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iw 146 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSF-IQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLR 146 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEE-ECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEE
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCccccee-eecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEE
Confidence 468899999999999999 9999999999999999998765543 22347899999999999 78999999999999999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEE
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~ 276 (279)
|+.+........ +. +|...|.+++|+|++++|++++.|+.|++||+ +++++..+.+|...|.++.
T Consensus 147 d~~~~~~~~~~~------------~~--~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~ 211 (383)
T 3ei3_B 147 DFSGSVIQVFAK------------TD--SWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAE 211 (383)
T ss_dssp ETTSCEEEEEEC------------CC--CSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEE
T ss_pred ECCCCceEEEec------------cC--CCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEE
Confidence 999644322211 11 14568999999999999999999999999999 5889999999999999886
Q ss_pred e
Q 023642 277 T 277 (279)
Q Consensus 277 ~ 277 (279)
.
T Consensus 212 ~ 212 (383)
T 3ei3_B 212 F 212 (383)
T ss_dssp E
T ss_pred E
Confidence 5
No 77
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.87 E-value=1.7e-21 Score=169.41 Aligned_cols=165 Identities=10% Similarity=0.054 Sum_probs=129.5
Q ss_pred eccccceEeeeeecCCCCceeeC--CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEE
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQ--TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~--h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (279)
.+.|+.+.+|++........+.+ |.+.|++++|+|++++|++|+.|+.|++||+.+++++.... ..|..+|.+++|
T Consensus 188 ~~~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~--~~~~~~v~~~~~ 265 (437)
T 3gre_A 188 LTNLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWS--FGDHAPITHVEV 265 (437)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEB--CTTCEEEEEEEE
T ss_pred EeCCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEe--cCCCCceEEEEe
Confidence 46678899999877666667777 89999999999999999999999999999999987766421 266778999966
Q ss_pred C----CCCCEEEEEeCCCeEEEEECCCCceeeeeccc-cccceeEEeeCC-------CC--CccccEEEEEEecCCCEEE
Q 023642 178 S----PDQRHLVYASMSPIVHIVDVGSGTMESLANVT-EIHDGLDFSAAD-------DG--GYSFGIFSLKFSTDGRELV 243 (279)
Q Consensus 178 s----p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~-------~~--~~~~~v~~~~~sp~g~~l~ 243 (279)
+ |++.+|++++.|+.|++||+++++........ .......|.+.+ -. .|...|.+++|+ ++++|+
T Consensus 266 ~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~ 344 (437)
T 3gre_A 266 CQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILL 344 (437)
T ss_dssp CTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEE
T ss_pred ccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEE
Confidence 5 46789999999999999999988864333211 111111122221 01 277889999999 789999
Q ss_pred EecCCCeEEEEECCCCeEEEEEeC
Q 023642 244 AGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 244 t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
+++.|+.|++||+.+++++..+.+
T Consensus 345 s~~~d~~i~~wd~~~~~~~~~~~~ 368 (437)
T 3gre_A 345 TDEATSSIVMFSLNELSSSKAVIS 368 (437)
T ss_dssp EEGGGTEEEEEETTCGGGCEEEEC
T ss_pred ecCCCCeEEEEECCCcccceEEec
Confidence 999999999999999998888887
No 78
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.87 E-value=1.4e-21 Score=165.33 Aligned_cols=151 Identities=12% Similarity=0.153 Sum_probs=123.6
Q ss_pred eccccceEeeeeecCCCCceee-----CCCCCeEEEEECCC----CCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCc
Q 023642 100 SAADCCHMLSRYLPVNGPWPVD-----QTTSRAYVSQFSAD----GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW 170 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~-----~h~~~V~~~~~spd----~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 170 (279)
.+.++.+.+|++........+. .|...|++++|+|+ +++|++|+.|+.|++||+.+++.+.. +..|..
T Consensus 40 ~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~---~~~~~~ 116 (366)
T 3k26_A 40 TVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKH---YVGHGN 116 (366)
T ss_dssp EEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEE---EESCCS
T ss_pred ECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeee---ecCCCC
Confidence 4556688999987665544443 26688999999998 67999999999999999999877654 457889
Q ss_pred ceEEEEECC-CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC
Q 023642 171 TVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249 (279)
Q Consensus 171 ~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~ 249 (279)
.|.+++|+| ++.+|++++.|+.|++||+++++........ .+|...|.+++|+|++++|++++.|+
T Consensus 117 ~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-------------~~~~~~v~~~~~~~~~~~l~~~~~dg 183 (366)
T 3k26_A 117 AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGV-------------EGHRDEVLSADYDLLGEKIMSCGMDH 183 (366)
T ss_dssp CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECST-------------TSCSSCEEEEEECTTSSEEEEEETTS
T ss_pred cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEeccc-------------ccccCceeEEEECCCCCEEEEecCCC
Confidence 999999999 9999999999999999999988764432110 12667999999999999999999999
Q ss_pred eEEEEECCCCeEEEEEe
Q 023642 250 CIYVYDLEANKLSLRIL 266 (279)
Q Consensus 250 ~i~vwd~~~~~~~~~~~ 266 (279)
.|++||+++++.+..+.
T Consensus 184 ~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 184 SLKLWRINSKRMMNAIK 200 (366)
T ss_dssp CEEEEESCSHHHHHHHH
T ss_pred CEEEEECCCCccccccc
Confidence 99999999876554443
No 79
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.87 E-value=9.2e-21 Score=163.24 Aligned_cols=158 Identities=16% Similarity=0.139 Sum_probs=137.5
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
.+.++.+.+|++........+.+|...|.+++|+|++++|++++.|+.|++||+.+++.... +..|...|.+++|+|
T Consensus 223 ~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~---~~~~~~~i~~~~~~~ 299 (425)
T 1r5m_A 223 PGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNC---FYGHSQSIVSASWVG 299 (425)
T ss_dssp ECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEE---ECCCSSCEEEEEEET
T ss_pred EcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceE---ecCCCccEEEEEECC
Confidence 45677888998877766777889999999999999999999999999999999998765544 357888999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
++ ++++++.|+.|++||+.+++...... . |...|.+++|+|++++|++++.|+.|++||+.++
T Consensus 300 ~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-----------~-----~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~ 362 (425)
T 1r5m_A 300 DD-KVISCSMDGSVRLWSLKQNTLLALSI-----------V-----DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKL 362 (425)
T ss_dssp TT-EEEEEETTSEEEEEETTTTEEEEEEE-----------C-----TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHH
T ss_pred CC-EEEEEeCCCcEEEEECCCCcEeEecc-----------c-----CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCC
Confidence 99 99999999999999999887644322 1 4558999999999999999999999999999988
Q ss_pred e--------------------EEEEEeCCCc--ceeEEEe
Q 023642 260 K--------------------LSLRILAHTV--NIALWIT 277 (279)
Q Consensus 260 ~--------------------~~~~~~~h~~--~v~~v~~ 277 (279)
+ ++..+.+|.. .|+++..
T Consensus 363 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 402 (425)
T 1r5m_A 363 NSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSW 402 (425)
T ss_dssp HC--------------CEECCEEEEECCTTCCCCEEEEEE
T ss_pred ccceeeeecccccccCcccchhhhhhcCcccCCceEEEEc
Confidence 8 8999999976 8888865
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.87 E-value=2.3e-20 Score=157.33 Aligned_cols=178 Identities=8% Similarity=0.066 Sum_probs=138.8
Q ss_pred eccccceEeeeeecCC-CCceeeCCCCCeEEEE------ECCCCCEEEEEeCCCcEEEEEcCCCe-EEeeeeeccCC-Cc
Q 023642 100 SAADCCHMLSRYLPVN-GPWPVDQTTSRAYVSQ------FSADGSLFVAGFQASQIRIYDVERGW-KIQKDILAKSL-RW 170 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~-~~~~l~~h~~~V~~~~------~spd~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~-~~ 170 (279)
.+.++.+.+|++.... ....+.+|...|.+++ |+|++++|++++.|+.|++||+.++. .........++ ..
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~ 165 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKR 165 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCC
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCC
Confidence 4568899999988766 5667899999999995 57899999999999999999999875 33332111221 33
Q ss_pred ceEEEE----ECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEee---CCC--------------------
Q 023642 171 TVTDTS----LSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSA---ADD-------------------- 223 (279)
Q Consensus 171 ~v~~~~----~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~---~~~-------------------- 223 (279)
.+.+++ |+|++++|++++.|+.|++||+++++.............+.|.+ .+.
T Consensus 166 ~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~ 245 (357)
T 3i2n_A 166 DCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQH 245 (357)
T ss_dssp CEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEE
T ss_pred ceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCC
Confidence 788888 78999999999999999999999988754443333333444444 222
Q ss_pred -----C-----CccccEEEEEEecCCC-EEEEecCCCeEEEEECCCC-------------------eEEEEEeCCCccee
Q 023642 224 -----G-----GYSFGIFSLKFSTDGR-ELVAGSSDDCIYVYDLEAN-------------------KLSLRILAHTVNIA 273 (279)
Q Consensus 224 -----~-----~~~~~v~~~~~sp~g~-~l~t~s~d~~i~vwd~~~~-------------------~~~~~~~~h~~~v~ 273 (279)
. +|...|.+++|+|+++ +|++++.|+.|++||++++ +++..+.+|...|+
T Consensus 246 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~ 325 (357)
T 3i2n_A 246 PTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPIS 325 (357)
T ss_dssp TTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEE
T ss_pred cccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCee
Confidence 1 7889999999999998 8999999999999999753 57889999999999
Q ss_pred EEEe
Q 023642 274 LWIT 277 (279)
Q Consensus 274 ~v~~ 277 (279)
++..
T Consensus 326 ~~~~ 329 (357)
T 3i2n_A 326 SLDW 329 (357)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8865
No 81
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.87 E-value=9.5e-21 Score=160.10 Aligned_cols=139 Identities=18% Similarity=0.227 Sum_probs=119.0
Q ss_pred ecCCCCceeeCCCCCeEEEEECCC---CCEEEEEeCCCcEEEEEcCC-CeEEeeeeeccCCCcceEEEEECCCCCEEEEE
Q 023642 112 LPVNGPWPVDQTTSRAYVSQFSAD---GSLFVAGFQASQIRIYDVER-GWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA 187 (279)
Q Consensus 112 ~~~~~~~~l~~h~~~V~~~~~spd---~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 187 (279)
.+......+.+|.+.|++++|+|+ |++|++|+.|+.|++||+.+ +..+.. .+..|...|.+++|+|++++|+++
T Consensus 27 ~~~~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~l~s~ 104 (368)
T 3mmy_A 27 NPMKDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPK--AQQMHTGPVLDVCWSDDGSKVFTA 104 (368)
T ss_dssp CTTCCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEE--EEEECSSCEEEEEECTTSSEEEEE
T ss_pred CCcceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEE--EeccccCCEEEEEECcCCCEEEEE
Confidence 344444567899999999999999 69999999999999999997 544422 246788999999999999999999
Q ss_pred eCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEE--ecCCCEEEEecCCCeEEEEECCCCeEEEEE
Q 023642 188 SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF--STDGRELVAGSSDDCIYVYDLEANKLSLRI 265 (279)
Q Consensus 188 ~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~ 265 (279)
+.|+.|++||+.+++...... |...|.+++| +|++.+|++++.|+.|++||+++++++..+
T Consensus 105 ~~dg~v~iwd~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 167 (368)
T 3mmy_A 105 SCDKTAKMWDLSSNQAIQIAQ-----------------HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVL 167 (368)
T ss_dssp ETTSEEEEEETTTTEEEEEEE-----------------CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEE
T ss_pred cCCCcEEEEEcCCCCceeecc-----------------ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEE
Confidence 999999999999887643221 5568999999 899999999999999999999999999998
Q ss_pred eCCC
Q 023642 266 LAHT 269 (279)
Q Consensus 266 ~~h~ 269 (279)
..|.
T Consensus 168 ~~~~ 171 (368)
T 3mmy_A 168 QLPE 171 (368)
T ss_dssp ECSS
T ss_pred ecCC
Confidence 8765
No 82
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.2e-20 Score=162.54 Aligned_cols=161 Identities=12% Similarity=0.154 Sum_probs=131.6
Q ss_pred ccccceEeeeeecCCC--CceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC---C-eEEeeeeeccCCCcceEE
Q 023642 101 AADCCHMLSRYLPVNG--PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER---G-WKIQKDILAKSLRWTVTD 174 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~~--~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~---~-~~~~~~~~~~~~~~~v~~ 174 (279)
+.|+.+.+|++..... ......|...|.+++|+|++++|++|+.|+.|++||+.. + .... .+..|...|.+
T Consensus 42 ~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~---~~~~h~~~v~~ 118 (416)
T 2pm9_A 42 STDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMA---RFSNHSSSVKT 118 (416)
T ss_dssp CCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEE---ECCCSSSCCCE
T ss_pred CCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchh---hccCCccceEE
Confidence 4677899999876542 333457899999999999999999999999999999987 2 2333 35689999999
Q ss_pred EEECCC-CCEEEEEeCCCeEEEEECCCCc------eeeeeccccccceeEEeeCCCCCccccEEEEEEecC-CCEEEEec
Q 023642 175 TSLSPD-QRHLVYASMSPIVHIVDVGSGT------MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGS 246 (279)
Q Consensus 175 ~~~sp~-~~~l~~~~~d~~i~i~d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~t~s 246 (279)
++|+|+ +++|++++.|+.|++||+.+++ ...... ...+|...|.+++|+|+ +.+|++++
T Consensus 119 ~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-------------~~~~~~~~v~~~~~~~~~~~~l~~~~ 185 (416)
T 2pm9_A 119 VKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG-------------QSMSSVDEVISLAWNQSLAHVFASAG 185 (416)
T ss_dssp EEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC-------------CSCCSSCCCCEEEECSSCTTEEEEES
T ss_pred EEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccc-------------cccCCCCCeeEEEeCCCCCcEEEEEc
Confidence 999998 8999999999999999999876 211110 01136679999999999 78999999
Q ss_pred CCCeEEEEECCCCeEEEEEeCC------CcceeEEEe
Q 023642 247 SDDCIYVYDLEANKLSLRILAH------TVNIALWIT 277 (279)
Q Consensus 247 ~d~~i~vwd~~~~~~~~~~~~h------~~~v~~v~~ 277 (279)
.|+.|++||+++++++..+..| ...|+++..
T Consensus 186 ~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 222 (416)
T 2pm9_A 186 SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEW 222 (416)
T ss_dssp SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEE
T ss_pred CCCCEEEEECCCCCcceEEeccccccccCCceEEEEE
Confidence 9999999999999999999877 677887764
No 83
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.86 E-value=1.3e-20 Score=175.91 Aligned_cols=142 Identities=11% Similarity=0.115 Sum_probs=126.5
Q ss_pred CceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 023642 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (279)
Q Consensus 117 ~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~ 196 (279)
...+.+|.+.|.+++|+|++++|++|+.||.|++||+.++..+.. +..|..+|.+++|+|++++|++++.|+.|++|
T Consensus 6 ~~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~---~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw 82 (814)
T 3mkq_A 6 KKTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRS---IQVTETPVRAGKFIARKNWIIVGSDDFRIRVF 82 (814)
T ss_dssp EEEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEE---EECCSSCEEEEEEEGGGTEEEEEETTSEEEEE
T ss_pred ceeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEE---EecCCCcEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 356889999999999999999999999999999999999877665 45788899999999999999999999999999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC-eEEEEEeCCCcceeEE
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN-KLSLRILAHTVNIALW 275 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~-~~~~~~~~h~~~v~~v 275 (279)
|+.+++...... +|...|.+++|+|++++|++++.|+.|++||+.++ .....+.+|...|.++
T Consensus 83 ~~~~~~~~~~~~----------------~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 83 NYNTGEKVVDFE----------------AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCV 146 (814)
T ss_dssp ETTTCCEEEEEE----------------CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEE
T ss_pred ECCCCcEEEEEe----------------cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEE
Confidence 999887643221 15669999999999999999999999999999987 7888999999999988
Q ss_pred Ee
Q 023642 276 IT 277 (279)
Q Consensus 276 ~~ 277 (279)
..
T Consensus 147 ~~ 148 (814)
T 3mkq_A 147 AF 148 (814)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 84
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=2.2e-20 Score=163.43 Aligned_cols=161 Identities=11% Similarity=0.012 Sum_probs=131.4
Q ss_pred ccCCCCee----eccccceEeeeee--cCCCCceee--CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEe-ee
Q 023642 92 NYSGRGRF----SAADCCHMLSRYL--PVNGPWPVD--QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQ-KD 162 (279)
Q Consensus 92 ~~~~~~~~----~~~d~~~~~~~~~--~~~~~~~l~--~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~-~~ 162 (279)
.+++++.+ .+.|+.+.+|++. .......+. .|...|++++|+|++++|++|+.|+.|++|++.++.... ..
T Consensus 109 ~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~ 188 (450)
T 2vdu_B 109 RLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQ 188 (450)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSCCC
T ss_pred EEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccccc
Confidence 45666654 3468899999997 444444454 678999999999999999999999999999998875432 11
Q ss_pred eeccCCCcceEEEEECCC---CCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCC
Q 023642 163 ILAKSLRWTVTDTSLSPD---QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239 (279)
Q Consensus 163 ~~~~~~~~~v~~~~~sp~---~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 239 (279)
..+.+|...|.+++|+|+ +++|++++.|+.|++||+.++....... .+|...|.+++|+ ++
T Consensus 189 ~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~---------------~~h~~~v~~~~~s-d~ 252 (450)
T 2vdu_B 189 EPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL---------------FGHKHFVSSICCG-KD 252 (450)
T ss_dssp CCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC---------------CCCSSCEEEEEEC-ST
T ss_pred eeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee---------------cCCCCceEEEEEC-CC
Confidence 234678889999999999 9999999999999999999877543211 1266799999999 99
Q ss_pred CEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 240 RELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 240 ~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
++|++++.|++|++||+.+++++..+..+
T Consensus 253 ~~l~s~~~d~~v~vwd~~~~~~~~~~~~~ 281 (450)
T 2vdu_B 253 YLLLSAGGDDKIFAWDWKTGKNLSTFDYN 281 (450)
T ss_dssp TEEEEEESSSEEEEEETTTCCEEEEEECH
T ss_pred CEEEEEeCCCeEEEEECCCCcEeeeecch
Confidence 99999999999999999999999998743
No 85
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.86 E-value=1.6e-20 Score=175.31 Aligned_cols=182 Identities=13% Similarity=0.170 Sum_probs=145.0
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
+++++.+ .+.++.+.+|++........+.+|...|.+++|+|++++|++|+.|+.|++||+.+++.+.. +..|.
T Consensus 21 ~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~---~~~~~ 97 (814)
T 3mkq_A 21 FHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVD---FEAHP 97 (814)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEE---EECCS
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEE---EecCC
Confidence 4555543 45678899998876666667889999999999999999999999999999999999877654 45788
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCce-eeee-ccccccceeEEee-CC--------C---------------
Q 023642 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM-ESLA-NVTEIHDGLDFSA-AD--------D--------------- 223 (279)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~-~~~~-~~~~~~~~~~~~~-~~--------~--------------- 223 (279)
..|++++|+|++++|++++.|+.|++||+.++.. .... ........+.|.+ ++ +
T Consensus 98 ~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 98 DYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp SCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred CCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccee
Confidence 8999999999999999999999999999987632 2111 1111111222322 11 1
Q ss_pred ---CCccccEEEEEEec--CCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 224 ---GGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 224 ---~~~~~~v~~~~~sp--~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
..+...+.+++|+| ++++|++++.|+.|++||+.+++++..+.+|...|.++..
T Consensus 178 ~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~ 236 (814)
T 3mkq_A 178 TLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVF 236 (814)
T ss_dssp EEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTTTEEEEEEECCSSCEEEEEE
T ss_pred EEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 23447899999999 9999999999999999999999999999999999988765
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.5e-20 Score=174.65 Aligned_cols=171 Identities=13% Similarity=0.141 Sum_probs=138.7
Q ss_pred cCCCCee---eccccceEeeeeec--CCCCceeeCCCCCeEEEEECCC--CCEEEEEeCCCcEEEEEcCCCeEEeeeeec
Q 023642 93 YSGRGRF---SAADCCHMLSRYLP--VNGPWPVDQTTSRAYVSQFSAD--GSLFVAGFQASQIRIYDVERGWKIQKDILA 165 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~--~~~~~~l~~h~~~V~~~~~spd--~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 165 (279)
+++++.+ ++.|+.+.+|++.. ......+.+|.+.|++++|+|+ +++|++|+.||.|++||+.++.... ....
T Consensus 17 ~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~-~~~~ 95 (753)
T 3jro_A 17 LDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ-IAVH 95 (753)
T ss_dssp CCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEE-EEEE
T ss_pred ECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccc-cccc
Confidence 4444443 45688999999873 3334557899999999999998 9999999999999999999885222 2235
Q ss_pred cCCCcceEEEEECCC--CCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEec------
Q 023642 166 KSLRWTVTDTSLSPD--QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST------ 237 (279)
Q Consensus 166 ~~~~~~v~~~~~sp~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp------ 237 (279)
..|...|.+++|+|+ +.++++++.|+.|++||++++....... +. +|...|.+++|+|
T Consensus 96 ~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~---------~~-----~~~~~v~~l~~~p~~~~~~ 161 (753)
T 3jro_A 96 AVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII---------ID-----AHAIGVNSASWAPATIEED 161 (753)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE---------EE-----CCSSCEEEEEECCCC----
T ss_pred cCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE---------ee-----cCCCceEEEEecCcccccc
Confidence 678899999999999 9999999999999999999874422211 11 2566999999999
Q ss_pred -------CCCEEEEecCCCeEEEEECCCC----eEEEEEeCCCcceeEEEee
Q 023642 238 -------DGRELVAGSSDDCIYVYDLEAN----KLSLRILAHTVNIALWITC 278 (279)
Q Consensus 238 -------~g~~l~t~s~d~~i~vwd~~~~----~~~~~~~~h~~~v~~v~~~ 278 (279)
++.+|++|+.|+.|++||++++ .++..+.+|...|+++..+
T Consensus 162 ~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~s 213 (753)
T 3jro_A 162 GEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWS 213 (753)
T ss_dssp -----CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEEC
T ss_pred cccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEec
Confidence 5899999999999999999876 6778899999999988753
No 87
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.86 E-value=1.4e-21 Score=166.53 Aligned_cols=157 Identities=15% Similarity=0.129 Sum_probs=118.1
Q ss_pred eeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEEC
Q 023642 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (279)
Q Consensus 119 ~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~ 198 (279)
....+.++|++++|+|++++|++|+.|+.|++||+.++... ....+.+|...|.+++|+|++++|++++.|+.|++||+
T Consensus 6 ~~~~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~-~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~ 84 (377)
T 3dwl_C 6 VLHILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWK-HARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEK 84 (377)
T ss_dssp EEEECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEE-ECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC--
T ss_pred eEecCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceE-EEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEc
Confidence 34557789999999999999999999999999999987311 12235689999999999999999999999999999999
Q ss_pred CCCc----eeeeeccccccceeEEeeCCC----------------------------CC-ccccEEEEEEecCCCEEEEe
Q 023642 199 GSGT----MESLANVTEIHDGLDFSAADD----------------------------GG-YSFGIFSLKFSTDGRELVAG 245 (279)
Q Consensus 199 ~~~~----~~~~~~~~~~~~~~~~~~~~~----------------------------~~-~~~~v~~~~~sp~g~~l~t~ 245 (279)
.++. .............+.|.+++. .+ |...|.+++|+|++++|+++
T Consensus 85 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~ 164 (377)
T 3dwl_C 85 RPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAG 164 (377)
T ss_dssp ----CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEE
T ss_pred CCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEE
Confidence 9876 222212222222222322221 22 88899999999999999999
Q ss_pred cCCCeEEEEECC------------------CCeEEEEEeCCCcceeEEEe
Q 023642 246 SSDDCIYVYDLE------------------ANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 246 s~d~~i~vwd~~------------------~~~~~~~~~~h~~~v~~v~~ 277 (279)
+.|++|++||+. .++++..+ +|...|+++..
T Consensus 165 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~ 213 (377)
T 3dwl_C 165 CADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGF 213 (377)
T ss_dssp ESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEE
T ss_pred eCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEE
Confidence 999999999984 46677788 89999998865
No 88
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.86 E-value=4.7e-21 Score=161.83 Aligned_cols=150 Identities=14% Similarity=0.053 Sum_probs=117.3
Q ss_pred eccccceEeeeee------cCCCCce----eeCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccC
Q 023642 100 SAADCCHMLSRYL------PVNGPWP----VDQTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWKIQKDILAKS 167 (279)
Q Consensus 100 ~~~d~~~~~~~~~------~~~~~~~----l~~h~~~V~~~~~sp--d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~ 167 (279)
.+.|+.+.+|+.. ....... ..+|.+.|.+++|+| ++++|++++.|++|++||+.+++.... ....
T Consensus 91 ~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~--~~~~ 168 (343)
T 3lrv_A 91 RGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIV--HSAK 168 (343)
T ss_dssp ECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEE--ECCC
T ss_pred ecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEE--EecC
Confidence 5678888888543 2222222 236778999999999 999999999999999999999877443 1234
Q ss_pred CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCcee-eeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec
Q 023642 168 LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME-SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (279)
Q Consensus 168 ~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s 246 (279)
+...|.+++|+|++.+|++|+.|+.|++||+++++.. .. +.. +|...|.+++|+|+|.+|++++
T Consensus 169 ~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~-----------~~~----~h~~~v~~l~fs~~g~~l~s~~ 233 (343)
T 3lrv_A 169 SDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSR-----------FPV----DEEAKIKEVKFADNGYWMVVEC 233 (343)
T ss_dssp SSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEE-----------CCC----CTTSCEEEEEECTTSSEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccE-----------Eec----cCCCCEEEEEEeCCCCEEEEEe
Confidence 5667999999999999999999999999999998754 11 111 1667999999999999999999
Q ss_pred CCCeEEEEECCCCeEEEEEeC
Q 023642 247 SDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 247 ~d~~i~vwd~~~~~~~~~~~~ 267 (279)
|+.|++||+++++++..+..
T Consensus 234 -~~~v~iwd~~~~~~~~~~~~ 253 (343)
T 3lrv_A 234 -DQTVVCFDLRKDVGTLAYPT 253 (343)
T ss_dssp -SSBEEEEETTSSTTCBSSCC
T ss_pred -CCeEEEEEcCCCCcceeecc
Confidence 45999999998876655443
No 89
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.6e-21 Score=170.08 Aligned_cols=161 Identities=9% Similarity=0.027 Sum_probs=123.4
Q ss_pred ccccceEeeeeecCCCC----ceeeCCCCCeEEEEECCC------CCEEEEEeCCCcEEEEEcCCCeEE--------eee
Q 023642 101 AADCCHMLSRYLPVNGP----WPVDQTTSRAYVSQFSAD------GSLFVAGFQASQIRIYDVERGWKI--------QKD 162 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~~~----~~l~~h~~~V~~~~~spd------~~~l~s~~~d~~i~iwd~~~~~~~--------~~~ 162 (279)
+.|+.+.+|++...... ..+.+|.+.|.+++|+|+ +.+||+++.|++|++||+..+... ...
T Consensus 180 s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~ 259 (524)
T 2j04_B 180 KHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPS 259 (524)
T ss_dssp --CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCS
T ss_pred CCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCce
Confidence 46778899998665432 236778899999999997 579999999999999999876321 011
Q ss_pred eeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEE--EEecCC-
Q 023642 163 ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSL--KFSTDG- 239 (279)
Q Consensus 163 ~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~sp~g- 239 (279)
..+.+|...|++++|+|++ .|++|+.||+|++||++++..... .+. +|...|.++ +|+|++
T Consensus 260 ~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~----------~~~-----~H~~~V~sv~~~~s~~g~ 323 (524)
T 2j04_B 260 LTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSF----------YDQ-----VHDSYILSVSTAYSDFED 323 (524)
T ss_dssp EEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSE----------EEE-----CSSSCEEEEEEECCTTSC
T ss_pred EEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceE----------Eee-----cccccEEEEEEEcCCCCC
Confidence 2356788999999999864 899999999999999987642110 111 266799999 578888
Q ss_pred CEEEEecCCCeEEEEECCCCeEEEEEeCCCc--ceeEEEe
Q 023642 240 RELVAGSSDDCIYVYDLEANKLSLRILAHTV--NIALWIT 277 (279)
Q Consensus 240 ~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~--~v~~v~~ 277 (279)
.+|+|++.|++|+|||+++++++.++.+|.. .|+++..
T Consensus 324 ~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~f 363 (524)
T 2j04_B 324 TVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVY 363 (524)
T ss_dssp CEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEE
T ss_pred eEEEEeccCCeEEEEECCCCCcccccccccccCcccceEe
Confidence 8999999999999999999888777777764 3555543
No 90
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.86 E-value=1.1e-19 Score=157.68 Aligned_cols=178 Identities=13% Similarity=0.170 Sum_probs=133.0
Q ss_pred eccccceEeeeeecCCCCcee--eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeee--------------
Q 023642 100 SAADCCHMLSRYLPVNGPWPV--DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI-------------- 163 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l--~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~-------------- 163 (279)
.+.|+++.+|+.........+ .+|...|++++|+|+|++|++|+.|+.|++||+.+++.+....
T Consensus 121 vgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~ 200 (420)
T 4gga_A 121 VALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY 200 (420)
T ss_dssp EEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred EEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCC
Confidence 456889999998766544444 5788899999999999999999999999999999876543321
Q ss_pred ------------------------eccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceee-----eeccccccc
Q 023642 164 ------------------------LAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMES-----LANVTEIHD 214 (279)
Q Consensus 164 ------------------------~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~-----~~~~~~~~~ 214 (279)
.+.+|...+..+.|+|+++++++++.|+.+++||..+++... .........
T Consensus 201 ~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~ 280 (420)
T 4gga_A 201 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK 280 (420)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEE
T ss_pred EEEEEeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCcee
Confidence 123567778899999999999999999999999998765311 111111111
Q ss_pred eeEEeeCC-----------C----------------CCccccEEEEEEecCCCEEEEec--CCCeEEEEECCCCeEEEEE
Q 023642 215 GLDFSAAD-----------D----------------GGYSFGIFSLKFSTDGRELVAGS--SDDCIYVYDLEANKLSLRI 265 (279)
Q Consensus 215 ~~~~~~~~-----------~----------------~~~~~~v~~~~~sp~g~~l~t~s--~d~~i~vwd~~~~~~~~~~ 265 (279)
.+.|.+.. + ..+...+.++.|+|+++.+++++ .|+.|+|||+.+++++.++
T Consensus 281 ~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l 360 (420)
T 4gga_A 281 AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAEL 360 (420)
T ss_dssp EEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEE
T ss_pred eeeeCCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEE
Confidence 11111111 1 01235688999999999888754 7899999999999999999
Q ss_pred eCCCcceeEEEe
Q 023642 266 LAHTVNIALWIT 277 (279)
Q Consensus 266 ~~h~~~v~~v~~ 277 (279)
.+|...|+++..
T Consensus 361 ~gH~~~V~~l~~ 372 (420)
T 4gga_A 361 KGHTSRVLSLTM 372 (420)
T ss_dssp CCCSSCEEEEEE
T ss_pred cCCCCCEEEEEE
Confidence 999999999875
No 91
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.86 E-value=5.9e-20 Score=158.34 Aligned_cols=156 Identities=15% Similarity=0.168 Sum_probs=124.4
Q ss_pred cccceEeeeeec-CCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCC
Q 023642 102 ADCCHMLSRYLP-VNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD 180 (279)
Q Consensus 102 ~d~~~~~~~~~~-~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 180 (279)
.++.+.+|++.. ......+.+|...|.+++|+|++++|++|+.|+.|++||+.++..... +..|...|.+++|+|+
T Consensus 194 ~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~---~~~~~~~v~~~~~~p~ 270 (401)
T 4aez_A 194 RSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFT---KTNHNAAVKAVAWCPW 270 (401)
T ss_dssp TTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEE---ECCCSSCCCEEEECTT
T ss_pred CCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEE---ecCCcceEEEEEECCC
Confidence 445555665542 222345789999999999999999999999999999999998876654 4578889999999997
Q ss_pred CC-EEEEEe--CCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEE--ecCCCeEEEEE
Q 023642 181 QR-HLVYAS--MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA--GSSDDCIYVYD 255 (279)
Q Consensus 181 ~~-~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t--~s~d~~i~vwd 255 (279)
+. ++++++ .|+.|++||+.+++...... +...|.+++|+|+++++++ |+.|+.|++||
T Consensus 271 ~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-----------------~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~ 333 (401)
T 4aez_A 271 QSNLLATGGGTMDKQIHFWNAATGARVNTVD-----------------AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWS 333 (401)
T ss_dssp STTEEEEECCTTTCEEEEEETTTCCEEEEEE-----------------CSSCEEEEEECSSSSEEEEEECTTTCEEEEEE
T ss_pred CCCEEEEecCCCCCEEEEEECCCCCEEEEEe-----------------CCCcEEEEEECCCCCeEEEEeecCCCcEEEEe
Confidence 75 455554 69999999999887644322 2347999999999999998 55899999999
Q ss_pred CCCCeEEE--EEeCCCcceeEEEe
Q 023642 256 LEANKLSL--RILAHTVNIALWIT 277 (279)
Q Consensus 256 ~~~~~~~~--~~~~h~~~v~~v~~ 277 (279)
+.+++... .+.+|...|.++..
T Consensus 334 ~~~~~~~~~~~~~~h~~~v~~~~~ 357 (401)
T 4aez_A 334 YSSSGLTKQVDIPAHDTRVLYSAL 357 (401)
T ss_dssp EETTEEEEEEEEECCSSCCCEEEE
T ss_pred cCCccceeEEEecCCCCCEEEEEE
Confidence 99966554 46799999988765
No 92
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.86 E-value=5.7e-20 Score=160.82 Aligned_cols=182 Identities=11% Similarity=0.043 Sum_probs=138.0
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCc----eeeCCCCCeEEEEECCC---CCEEEEEeCCCcEEEEEcCCCeEEee
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPW----PVDQTTSRAYVSQFSAD---GSLFVAGFQASQIRIYDVERGWKIQK 161 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~----~l~~h~~~V~~~~~spd---~~~l~s~~~d~~i~iwd~~~~~~~~~ 161 (279)
.+++++.+ .+.++.+.+|+++...... .+.+|...|++++|+|+ +++|++|+.|+.|++||+.++..+..
T Consensus 156 ~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~ 235 (450)
T 2vdu_B 156 SIAEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDK 235 (450)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEE
T ss_pred EEcCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeee
Confidence 35666654 3456778888877655443 67899999999999999 99999999999999999998876554
Q ss_pred eeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeecccccccee---------EEeeCCCCCccccEEE
Q 023642 162 DILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGL---------DFSAADDGGYSFGIFS 232 (279)
Q Consensus 162 ~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~v~~ 232 (279)
. ..+|...|.+++|+ ++++|++++.|+.|++||+.+++.............+ .|...........|.+
T Consensus 236 ~--~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 312 (450)
T 2vdu_B 236 W--LFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSK 312 (450)
T ss_dssp E--CCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEE
T ss_pred e--ecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEEE
Confidence 2 45788999999999 9999999999999999999998865443321110000 1111111123457999
Q ss_pred EEEecCCCEEEEec-CCCeEEEEEC--CCC---eEEEEEeCCCcceeEEEe
Q 023642 233 LKFSTDGRELVAGS-SDDCIYVYDL--EAN---KLSLRILAHTVNIALWIT 277 (279)
Q Consensus 233 ~~~sp~g~~l~t~s-~d~~i~vwd~--~~~---~~~~~~~~h~~~v~~v~~ 277 (279)
++|+|++++|++++ .|+.|++|++ .++ +.+..+.+| ..|.++..
T Consensus 313 i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~ 362 (450)
T 2vdu_B 313 IIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFP-YNVISLSA 362 (450)
T ss_dssp EEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECS-SCEEEEEE
T ss_pred EEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccC-CceEEEEe
Confidence 99999999999988 8999999999 666 788899988 77777654
No 93
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.86 E-value=5.6e-20 Score=166.03 Aligned_cols=168 Identities=13% Similarity=0.013 Sum_probs=125.5
Q ss_pred CccCCCCee--eccccceEeeeeecC----CCCceeeCCCCC-eEEEEECC--CCCEEEEEeCCCcEEEEEcCCC-----
Q 023642 91 GNYSGRGRF--SAADCCHMLSRYLPV----NGPWPVDQTTSR-AYVSQFSA--DGSLFVAGFQASQIRIYDVERG----- 156 (279)
Q Consensus 91 ~~~~~~~~~--~~~d~~~~~~~~~~~----~~~~~l~~h~~~-V~~~~~sp--d~~~l~s~~~d~~i~iwd~~~~----- 156 (279)
..+++++.+ .+.++.+.+|++... .....+.+|... |++++|+| ++++|++|+.|+.|++||+.++
T Consensus 24 ~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~ 103 (615)
T 1pgu_A 24 LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNS 103 (615)
T ss_dssp CEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTE
T ss_pred EEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccc
Confidence 345666653 345778999998866 566678999999 99999999 9999999999999999999754
Q ss_pred ---eEEeeeeeccCCCcceEEEEECCCCCEEEEEe---------------------------------------------
Q 023642 157 ---WKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS--------------------------------------------- 188 (279)
Q Consensus 157 ---~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--------------------------------------------- 188 (279)
.... .+..|...|.+++|+|++++|++++
T Consensus 104 ~~~~~~~---~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~ 180 (615)
T 1pgu_A 104 VEVNVKS---EFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVG 180 (615)
T ss_dssp EEEEEEE---EEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEE
T ss_pred ccccccc---hhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeeecCCccEEEEEECCCCCcEEEEEe
Confidence 2222 2334555566666666655555554
Q ss_pred CCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccc---cEEEEEEecC-CCEEEEecCCCeEEEEECCCCeEEEE
Q 023642 189 MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSF---GIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLR 264 (279)
Q Consensus 189 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~sp~-g~~l~t~s~d~~i~vwd~~~~~~~~~ 264 (279)
.|+.|++||+.+++..... .+|.. .|.+++|+|+ +++|++++.|+.|++||+.+++.+..
T Consensus 181 ~d~~v~vwd~~~~~~~~~~----------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~ 244 (615)
T 1pgu_A 181 DDGSVVFYQGPPFKFSASD----------------RTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKY 244 (615)
T ss_dssp TTTEEEEEETTTBEEEEEE----------------CSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEE
T ss_pred CCCcEEEEeCCCcceeeee----------------cccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEE
Confidence 4445555554443332111 23666 8999999999 99999999999999999999999999
Q ss_pred E-e---CCCcceeEEEe
Q 023642 265 I-L---AHTVNIALWIT 277 (279)
Q Consensus 265 ~-~---~h~~~v~~v~~ 277 (279)
+ . +|...|.++..
T Consensus 245 ~~~~~~~~~~~v~~~~~ 261 (615)
T 1pgu_A 245 IEDDQEPVQGGIFALSW 261 (615)
T ss_dssp CCBTTBCCCSCEEEEEE
T ss_pred ecccccccCCceEEEEE
Confidence 9 6 89999988765
No 94
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.85 E-value=7.9e-20 Score=178.07 Aligned_cols=141 Identities=21% Similarity=0.230 Sum_probs=126.0
Q ss_pred ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 023642 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (279)
Q Consensus 118 ~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d 197 (279)
..+.+|.+.|++++|+|++++|++|+.|++|++||+.+++.+.. +.+|...|.+++|+|++++|++++.|+.|++||
T Consensus 609 ~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~---~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd 685 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLD---IKAHEDEVLCCAFSSDDSYIATCSADKKVKIWD 685 (1249)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEE---ECCCSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred EEEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEE---eccCCCCEEEEEEecCCCEEEEEeCCCeEEEEE
Confidence 34789999999999999999999999999999999999977665 468999999999999999999999999999999
Q ss_pred CCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEec--CCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEE
Q 023642 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALW 275 (279)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v 275 (279)
+.+++..... . +|...|.+++|+| ++.++++++.|+.|++||+.+++++.++.+|...|+++
T Consensus 686 ~~~~~~~~~~-----------~-----~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~ 749 (1249)
T 3sfz_A 686 SATGKLVHTY-----------D-----EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHC 749 (1249)
T ss_dssp TTTCCEEEEE-----------E-----CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEE
T ss_pred CCCCceEEEE-----------c-----CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEE
Confidence 9998764322 2 2666999999999 55689999999999999999999999999999999988
Q ss_pred Ee
Q 023642 276 IT 277 (279)
Q Consensus 276 ~~ 277 (279)
..
T Consensus 750 ~~ 751 (1249)
T 3sfz_A 750 RF 751 (1249)
T ss_dssp EE
T ss_pred EE
Confidence 64
No 95
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.85 E-value=6.6e-20 Score=159.57 Aligned_cols=162 Identities=17% Similarity=0.133 Sum_probs=129.6
Q ss_pred eccccceEeeeeecCCC-------CceeeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcc
Q 023642 100 SAADCCHMLSRYLPVNG-------PWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWT 171 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~-------~~~l~~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 171 (279)
++.++.+.+|++..... ...+.+|...|.+++|+| ++.+|++++.|+.|++||++++...........|...
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 279 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAE 279 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSSC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCCC
Confidence 45688899998866322 344679999999999999 7889999999999999999976311122224578889
Q ss_pred eEEEEECCCCC-EEEEEeCCCeEEEEECCCCce-eeeeccccccceeEEeeCCCCCccccEEEEEEecCCC-EEEEecCC
Q 023642 172 VTDTSLSPDQR-HLVYASMSPIVHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGSSD 248 (279)
Q Consensus 172 v~~~~~sp~~~-~l~~~~~d~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~t~s~d 248 (279)
|.+++|+|++. +|++++.|+.|++||+++... .. .+.. |...|.+++|+|+++ +|++++.|
T Consensus 280 v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~-----------~~~~-----h~~~v~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 280 VNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLH-----------SFES-----HKDEIFQVQWSPHNETILASSGTD 343 (430)
T ss_dssp EEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSE-----------EEEC-----CSSCEEEEEECSSCTTEEEEEETT
T ss_pred eEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeE-----------Eeec-----CCCCEEEEEECCCCCCEEEEEeCC
Confidence 99999999987 688999999999999997432 11 1222 556999999999985 68899999
Q ss_pred CeEEEEECCC--------------CeEEEEEeCCCcceeEEEe
Q 023642 249 DCIYVYDLEA--------------NKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 249 ~~i~vwd~~~--------------~~~~~~~~~h~~~v~~v~~ 277 (279)
+.|++||+.. .+.+..+.+|...|+++..
T Consensus 344 ~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~ 386 (430)
T 2xyi_A 344 RRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSW 386 (430)
T ss_dssp SCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEE
T ss_pred CcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEE
Confidence 9999999986 3678888999999998865
No 96
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.85 E-value=8.5e-20 Score=177.87 Aligned_cols=183 Identities=17% Similarity=0.163 Sum_probs=148.8
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECC--CCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSA--DGSLFVAGFQASQIRIYDVERGWKIQKDILAK 166 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~sp--d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (279)
.+++++.+ .+.|+.+.+|++........+.+|...|.+++|+| ++.++++|+.|+.|++||+.++.+... +.
T Consensus 664 ~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~---~~ 740 (1249)
T 3sfz_A 664 AFSSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNT---MF 740 (1249)
T ss_dssp EECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEE---EC
T ss_pred EEecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhhe---ec
Confidence 36777765 45688999999887776677899999999999999 566899999999999999999977654 46
Q ss_pred CCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeecccc--------------ccceeEEeeCCC---------
Q 023642 167 SLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTE--------------IHDGLDFSAADD--------- 223 (279)
Q Consensus 167 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~--------------~~~~~~~~~~~~--------- 223 (279)
+|...|.+++|+|++++|++++.|+.|++||+.++.......... ....+.|.+++.
T Consensus 741 ~h~~~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~ 820 (1249)
T 3sfz_A 741 GHTNSVNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNK 820 (1249)
T ss_dssp CCSSCEEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTE
T ss_pred CCCCCEEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCc
Confidence 899999999999999999999999999999998876533222111 000111111111
Q ss_pred ----------------CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 224 ----------------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 224 ----------------~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.+|...|.+++|+|+++++++++.|+.|++||+.++..+..+.+|...|+++..
T Consensus 821 v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~ 890 (1249)
T 3sfz_A 821 VLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMF 890 (1249)
T ss_dssp EEEEETTTCCEEEEEECSSSSCCCEEEECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred EEEEEecCCCceeEEcCCCCCceEEEEEcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEE
Confidence 257789999999999999999999999999999999999999999999998865
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.85 E-value=1.1e-20 Score=162.11 Aligned_cols=162 Identities=14% Similarity=0.131 Sum_probs=134.3
Q ss_pred eeccccceEeeeeecCCCCceeeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeee----------ccC
Q 023642 99 FSAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDIL----------AKS 167 (279)
Q Consensus 99 ~~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~----------~~~ 167 (279)
+...+..+.+|++........+.+|.+.|++++|+| ++++|++|+.|+.|++||+.++........ ...
T Consensus 18 ~~~~~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
T 4a11_B 18 LRRAESTRRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDV 97 (408)
T ss_dssp HHHHHHHHHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTC
T ss_pred eeeccCcceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccccccccccc
Confidence 344556667787777777777899999999999999 999999999999999999998754332110 125
Q ss_pred CCcceEEEEECC-CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC---CCEEE
Q 023642 168 LRWTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELV 243 (279)
Q Consensus 168 ~~~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---g~~l~ 243 (279)
|...|.+++|+| ++.+|++++.|+.|++||+.+++...... +...+.++.|+|. +.+++
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~~~~~~ 160 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFN-----------------FEETVYSHHMSPVSTKHCLVA 160 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEE-----------------CSSCEEEEEECSSCSSCCEEE
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceecc-----------------CCCceeeeEeecCCCCCcEEE
Confidence 888999999999 77899999999999999999987654332 2337889999885 44999
Q ss_pred EecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 244 AGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 244 t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
+++.|+.|++||+++++++..+.+|...|.++..
T Consensus 161 ~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~ 194 (408)
T 4a11_B 161 VGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSW 194 (408)
T ss_dssp EEESSSSEEEEESSSSCCCEEECCCCSCEEEEEE
T ss_pred EEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEE
Confidence 9999999999999999999999999999998865
No 98
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.85 E-value=6e-19 Score=149.02 Aligned_cols=155 Identities=14% Similarity=0.110 Sum_probs=131.6
Q ss_pred cceEeeeeecCCC-----------CceeeCCCC--CeEEEEECCCCCEEEEEeCCCcEEEEEcCC-CeEEeeeeeccCCC
Q 023642 104 CCHMLSRYLPVNG-----------PWPVDQTTS--RAYVSQFSADGSLFVAGFQASQIRIYDVER-GWKIQKDILAKSLR 169 (279)
Q Consensus 104 ~~~~~~~~~~~~~-----------~~~l~~h~~--~V~~~~~spd~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~ 169 (279)
+.+.+|++..... ...+..|.. .+.+++|+|++++|++++.|+.|++||+.+ +..... ...|.
T Consensus 142 g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~---~~~~~ 218 (369)
T 3zwl_B 142 GSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDS---IDLHE 218 (369)
T ss_dssp CEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEE---EECCS
T ss_pred CEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEE---EecCC
Confidence 7888888876542 234566666 999999999999999999999999999998 444443 45788
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC
Q 023642 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249 (279)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~ 249 (279)
..|.+++|+|++++|++++.|+.|++||+.+++...... +...+.+++|+|+++++++++.++
T Consensus 219 ~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 219 KSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYE-----------------TDCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp SCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEE-----------------CSSCEEEEEECSSSSEEEEEECCC
T ss_pred CceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeec-----------------CCCCceeEEecCCCceEEEeecCC
Confidence 899999999999999999999999999999987654332 234799999999999999999888
Q ss_pred --------------eEEEEECCCCeEEEEEeCCCcceeEEEee
Q 023642 250 --------------CIYVYDLEANKLSLRILAHTVNIALWITC 278 (279)
Q Consensus 250 --------------~i~vwd~~~~~~~~~~~~h~~~v~~v~~~ 278 (279)
.+++||+.+++++..+.+|...|+++..+
T Consensus 282 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s 324 (369)
T 3zwl_B 282 AKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAIS 324 (369)
T ss_dssp -------------CEEEEEETTTCCEEEEEECCSSCEEEEEEC
T ss_pred CceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEEC
Confidence 89999999999999999999999988753
No 99
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.85 E-value=1.9e-19 Score=148.99 Aligned_cols=173 Identities=12% Similarity=0.005 Sum_probs=134.7
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
.+.|+.+.+|++........+..|...|.+++|+|++++|++++.|+.|++|++...........+..|...|.+++|
T Consensus 35 ~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~-- 112 (313)
T 3odt_A 35 VSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF-- 112 (313)
T ss_dssp EETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--
T ss_pred EEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--
Confidence 567888999998666556678899999999999999999999999999999999765322222335688899999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCcee-eeeccccccceeEEee-CCC-----------------------CC-ccccEEEE
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTME-SLANVTEIHDGLDFSA-ADD-----------------------GG-YSFGIFSL 233 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~-~~~~~~~~~~~~~~~~-~~~-----------------------~~-~~~~v~~~ 233 (279)
++++|++++.|+.|++|| .+... ...........+.+.+ .+. .. |...+.++
T Consensus 113 ~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~i~~~ 190 (313)
T 3odt_A 113 QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQNDKVIKTFSGIHNDVVRHL 190 (313)
T ss_dssp ETTEEEEEETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETTEEEEEECSSCSSCEEEE
T ss_pred cCCEEEEEeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecCceEEEEeccCcccEEEE
Confidence 678999999999999999 22222 1111111111222222 111 22 78899999
Q ss_pred EEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 234 KFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 234 ~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
+|+|++. +++++.|+.|++||+++++++..+.+|...|+++..
T Consensus 191 ~~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~ 233 (313)
T 3odt_A 191 AVVDDGH-FISCSNDGLIKLVDMHTGDVLRTYEGHESFVYCIKL 233 (313)
T ss_dssp EEEETTE-EEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEE
T ss_pred EEcCCCe-EEEccCCCeEEEEECCchhhhhhhhcCCceEEEEEE
Confidence 9999998 889999999999999999999999999999998865
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.84 E-value=2e-19 Score=148.83 Aligned_cols=154 Identities=12% Similarity=0.174 Sum_probs=128.3
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEEC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (279)
.+.++.+.+|+ .......+..|...|.+++|+| ++.+|++++.|+.|++||.. ...... ...|...|.+++|+
T Consensus 120 ~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~--~~~~~~--~~~~~~~i~~~~~~ 193 (313)
T 3odt_A 120 GSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQND--KVIKTF--SGIHNDVVRHLAVV 193 (313)
T ss_dssp EETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEETT--EEEEEE--CSSCSSCEEEEEEE
T ss_pred EeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEecC--ceEEEE--eccCcccEEEEEEc
Confidence 45678888888 3444456789999999999998 99999999999999999933 333321 23388899999999
Q ss_pred CCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCC
Q 023642 179 PDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA 258 (279)
Q Consensus 179 p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~ 258 (279)
|++. +++++.|+.|++||+++++...... +|...|.+++|+|++ .|++++.|+.|++||+++
T Consensus 194 ~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~----------------~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~ 255 (313)
T 3odt_A 194 DDGH-FISCSNDGLIKLVDMHTGDVLRTYE----------------GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN 255 (313)
T ss_dssp ETTE-EEEEETTSEEEEEETTTCCEEEEEE----------------CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTT
T ss_pred CCCe-EEEccCCCeEEEEECCchhhhhhhh----------------cCCceEEEEEEecCC-CEEEEecCCEEEEEECCC
Confidence 9998 9999999999999999887643221 156699999999999 588999999999999999
Q ss_pred CeEEEEEeCCCcceeEEEe
Q 023642 259 NKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 259 ~~~~~~~~~h~~~v~~v~~ 277 (279)
++++..+..|...|.++..
T Consensus 256 ~~~~~~~~~~~~~i~~~~~ 274 (313)
T 3odt_A 256 GSLKQVITLPAISIWSVDC 274 (313)
T ss_dssp CCEEEEEECSSSCEEEEEE
T ss_pred CceeEEEeccCceEEEEEE
Confidence 9999999999999988764
No 101
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.84 E-value=7.4e-20 Score=161.14 Aligned_cols=166 Identities=13% Similarity=0.043 Sum_probs=123.8
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCceeeCCCC-----CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeE-----
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTS-----RAYVSQFSADGSLFVAGFQASQIRIYDVERGWK----- 158 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~-----~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~----- 158 (279)
.++|+|.. .+.++.+.+|+... ....+. |.. .|.+++|||||++|++|+.||+|++||+.++..
T Consensus 92 awSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~ 168 (588)
T 2j04_A 92 KPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEF 168 (588)
T ss_dssp EECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCC
T ss_pred EECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCccccccc
Confidence 56888775 56788899998322 111234 554 499999999999999999999999999998742
Q ss_pred --Eeee-eeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEE
Q 023642 159 --IQKD-ILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF 235 (279)
Q Consensus 159 --~~~~-~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 235 (279)
+... ....+|...|.+++|+||| +++++.|+.+++||+.++....... .+.+ +|...|.+++|
T Consensus 169 i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~--------tL~~----~h~~~V~svaF 234 (588)
T 2j04_A 169 YFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSR--------MIQN----ASRRKITDLKI 234 (588)
T ss_dssp EEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEE--------EEEC----CCSSCCCCEEE
T ss_pred eeeeeeecccccccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccccee--------eecc----cccCcEEEEEE
Confidence 2221 0125688899999999999 8889999999999998876421000 0100 15568999999
Q ss_pred ecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 236 STDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 236 sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
+ |+.|++++ +++|++||+.+++......+|.+.|+.+..
T Consensus 235 s--g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~ 273 (588)
T 2j04_A 235 V--DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPL 273 (588)
T ss_dssp E--TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEE
T ss_pred E--CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEe
Confidence 9 68999887 699999999988774444489999887653
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.84 E-value=1.7e-19 Score=154.53 Aligned_cols=168 Identities=12% Similarity=0.069 Sum_probs=122.7
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeEEeeee-------------ec
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDI-------------LA 165 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~~~~~~~-------------~~ 165 (279)
.+.++.+.+|++........+.+|...|.+++|+|+++ +|++|+.|+.|++||+..+....... ..
T Consensus 162 ~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (408)
T 4a11_B 162 GTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESAN 241 (408)
T ss_dssp EESSSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSS
T ss_pred EcCCCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeecccc
Confidence 45678899999887777788999999999999999998 58999999999999998764211111 11
Q ss_pred cCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccc---c------------ceeEEeeCCC-------
Q 023642 166 KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEI---H------------DGLDFSAADD------- 223 (279)
Q Consensus 166 ~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---~------------~~~~~~~~~~------- 223 (279)
..|...|.+++|+|++++|++++.|+.|++||+.+++.......... . ..+.+.....
T Consensus 242 ~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~ 321 (408)
T 4a11_B 242 TAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTV 321 (408)
T ss_dssp CSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEET
T ss_pred ccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEEC
Confidence 46888999999999999999999999999999998765322110000 0 0000000000
Q ss_pred ---------CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 224 ---------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 224 ---------~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
.+|...|.+++|+|++++|++++.|+.|++||+.+++++.....
T Consensus 322 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~ 374 (408)
T 4a11_B 322 YSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDDDE 374 (408)
T ss_dssp TTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---------
T ss_pred cCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCCCc
Confidence 35778999999999999999999999999999999887766543
No 103
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.84 E-value=3.4e-20 Score=161.33 Aligned_cols=141 Identities=17% Similarity=0.255 Sum_probs=111.5
Q ss_pred eeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeee-----eccCCCcceEEEEECCCC-CEEEEEeCCCeE
Q 023642 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI-----LAKSLRWTVTDTSLSPDQ-RHLVYASMSPIV 193 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~-----~~~~~~~~v~~~~~sp~~-~~l~~~~~d~~i 193 (279)
+.+|...|.+++|+|++++|++| .|+.|++||+.++....... ....|...|.+++|+|++ ++|++++.|+.|
T Consensus 173 ~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i 251 (447)
T 3dw8_B 173 ANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI 251 (447)
T ss_dssp CSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE
T ss_pred ccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE
Confidence 46899999999999999999999 79999999998543322211 246888899999999998 999999999999
Q ss_pred EEEECCCCceeee-eccccccceeEEeeCCC-------CCccccEEEEEEecCCCEEEEecCCCeEEEEECCC-CeEEEE
Q 023642 194 HIVDVGSGTMESL-ANVTEIHDGLDFSAADD-------GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA-NKLSLR 264 (279)
Q Consensus 194 ~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~-------~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~-~~~~~~ 264 (279)
++||++++..... .. .+..+.. .+|...|.+++|+|+|++|++++. +.|++||+++ ++++..
T Consensus 252 ~iwd~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~ 322 (447)
T 3dw8_B 252 RLCDMRASALCDRHSK--------LFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVET 322 (447)
T ss_dssp EEEETTTCSSSCTTCE--------EECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCC
T ss_pred EEEECcCCccccceee--------EeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccce
Confidence 9999998774100 00 1111100 012348999999999999999998 9999999997 889999
Q ss_pred EeCCCc
Q 023642 265 ILAHTV 270 (279)
Q Consensus 265 ~~~h~~ 270 (279)
+.+|..
T Consensus 323 ~~~~~~ 328 (447)
T 3dw8_B 323 YQVHEY 328 (447)
T ss_dssp EESCGG
T ss_pred eecccc
Confidence 998864
No 104
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.84 E-value=1.2e-19 Score=152.26 Aligned_cols=162 Identities=14% Similarity=0.173 Sum_probs=130.1
Q ss_pred eccccceEeeeeec---------CCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-CeEEeeeeeccCCC
Q 023642 100 SAADCCHMLSRYLP---------VNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER-GWKIQKDILAKSLR 169 (279)
Q Consensus 100 ~~~d~~~~~~~~~~---------~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~ 169 (279)
.+.|+.+.+|++.. ......+. |...|.+++|+|++ +++++.|+.|++||+.+ +..... .....|.
T Consensus 118 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~~~ 193 (342)
T 1yfq_A 118 ASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGT-IEESGLK 193 (342)
T ss_dssp EETTSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCE-EEECSCS
T ss_pred EcCCCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccce-eeecCCC
Confidence 46788899998876 44444444 99999999999987 99999999999999988 543212 1234677
Q ss_pred cceEEEEECC-CCCEEEEEeCCCeEEEEECCCC------ceeeeeccccccceeEEeeCC----CCCccccEEEEEEecC
Q 023642 170 WTVTDTSLSP-DQRHLVYASMSPIVHIVDVGSG------TMESLANVTEIHDGLDFSAAD----DGGYSFGIFSLKFSTD 238 (279)
Q Consensus 170 ~~v~~~~~sp-~~~~l~~~~~d~~i~i~d~~~~------~~~~~~~~~~~~~~~~~~~~~----~~~~~~~v~~~~~sp~ 238 (279)
..|.+++|+| +++++++++.|+.+++||+... .... .+..+. ..+|...|.+++|+|+
T Consensus 194 ~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~i~~~~~s~~ 262 (342)
T 1yfq_A 194 YQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRF-----------AFRCHRLNLKDTNLAYPVNSIEFSPR 262 (342)
T ss_dssp SCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCE-----------EEECCCCCTTCCSSCCCEEEEEECTT
T ss_pred CceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccce-----------eeecccccccccccceeEEEEEEcCC
Confidence 8899999999 9999999999999999999876 2221 122111 1124569999999999
Q ss_pred CCEEEEecCCCeEEEEECCCCeEEEEEeCC-CcceeEEE
Q 023642 239 GRELVAGSSDDCIYVYDLEANKLSLRILAH-TVNIALWI 276 (279)
Q Consensus 239 g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h-~~~v~~v~ 276 (279)
+++|++++.|+.|++||+.+++++..+.+| ...|+++.
T Consensus 263 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~ 301 (342)
T 1yfq_A 263 HKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA 301 (342)
T ss_dssp TCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE
T ss_pred CCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec
Confidence 999999999999999999999999999998 99988764
No 105
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.84 E-value=2.1e-19 Score=156.45 Aligned_cols=155 Identities=17% Similarity=0.171 Sum_probs=131.6
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
++.|+.+.+|++........+.+|...|.+++|++ .+|++|+.|+.|++||+.++..........+|...|.+++|
T Consensus 189 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~-- 264 (435)
T 1p22_A 189 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF-- 264 (435)
T ss_dssp EETTSCEEEEESSSCCEEEEECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--
T ss_pred EcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--
Confidence 46788899999877776677889999999999975 59999999999999999887655433446788999999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
++++|++++.|+.|++||+++++..... . +|...|.++.|+ +.++++|+.|+.|++||++++
T Consensus 265 ~~~~l~s~~~dg~i~vwd~~~~~~~~~~-----------~-----~~~~~v~~~~~~--~~~l~~g~~dg~i~iwd~~~~ 326 (435)
T 1p22_A 265 DDKYIVSASGDRTIKVWNTSTCEFVRTL-----------N-----GHKRGIACLQYR--DRLVVSGSSDNTIRLWDIECG 326 (435)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEE-----------E-----CCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTC
T ss_pred CCCEEEEEeCCCeEEEEECCcCcEEEEE-----------c-----CCCCcEEEEEeC--CCEEEEEeCCCeEEEEECCCC
Confidence 7889999999999999999998764322 1 155689999984 789999999999999999999
Q ss_pred eEEEEEeCCCcceeEEE
Q 023642 260 KLSLRILAHTVNIALWI 276 (279)
Q Consensus 260 ~~~~~~~~h~~~v~~v~ 276 (279)
+++.++.+|...|.++.
T Consensus 327 ~~~~~~~~h~~~v~~~~ 343 (435)
T 1p22_A 327 ACLRVLEGHEELVRCIR 343 (435)
T ss_dssp CEEEEECCCSSCEEEEE
T ss_pred CEEEEEeCCcCcEEEEE
Confidence 99999999999998875
No 106
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.84 E-value=1.4e-19 Score=158.58 Aligned_cols=155 Identities=19% Similarity=0.157 Sum_probs=131.9
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
.+.|+.+.+|++........+.+|...|.+++|+|++++|++|+.|+.|++||+.+++++.. +.+|...|.+++|+
T Consensus 286 ~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~- 361 (464)
T 3v7d_B 286 GSYDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYT---LQGHTALVGLLRLS- 361 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEEC-
T ss_pred EeCCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEE---EeCCCCcEEEEEEc-
Confidence 45688899999876666667889999999999999999999999999999999999987665 46888999999997
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
+.+|++++.|+.|++||+.++....... +...+..++|+|++++|++++ |+.|++||++++
T Consensus 362 -~~~l~s~s~dg~v~vwd~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 362 -DKFLVSAAADGSIRGWDANDYSRKFSYH-----------------HTNLSAITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp -SSEEEEEETTSEEEEEETTTCCEEEEEE-----------------CTTCCCEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred -CCEEEEEeCCCcEEEEECCCCceeeeec-----------------CCCCccEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 5799999999999999999876532211 233677889999999999998 899999999999
Q ss_pred eEEEE-EeCCCcceeEEEe
Q 023642 260 KLSLR-ILAHTVNIALWIT 277 (279)
Q Consensus 260 ~~~~~-~~~h~~~v~~v~~ 277 (279)
+.+.. +.+|...|.++..
T Consensus 423 ~~~~~~~~~~~~~v~~v~~ 441 (464)
T 3v7d_B 423 KLVHANILKDADQIWSVNF 441 (464)
T ss_dssp CEEESCTTTTCSEEEEEEE
T ss_pred cEEehhhccCCCcEEEEEe
Confidence 99986 6678888888754
No 107
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.84 E-value=5.4e-20 Score=157.62 Aligned_cols=168 Identities=11% Similarity=0.033 Sum_probs=131.7
Q ss_pred eccccceEeeeeecCC------CCceeeCCCCCeEEEEECCC----C---CEEEEEeCCCcEEEEEcCCCeE-----Eee
Q 023642 100 SAADCCHMLSRYLPVN------GPWPVDQTTSRAYVSQFSAD----G---SLFVAGFQASQIRIYDVERGWK-----IQK 161 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~------~~~~l~~h~~~V~~~~~spd----~---~~l~s~~~d~~i~iwd~~~~~~-----~~~ 161 (279)
.+.|+.+.+|++.... ....+.+|...|.+++|+|+ + ++|++++.|+.|++||+.++.. ...
T Consensus 32 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~ 111 (397)
T 1sq9_A 32 CSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEK 111 (397)
T ss_dssp EETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEE
T ss_pred EcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccccccee
Confidence 4678899999988766 45568899999999999999 9 9999999999999999987754 333
Q ss_pred eeeccCC-----CcceEEEEEC----CCCCE-EEEEeCCCeEEEEECCC------CceeeeeccccccceeEEee--CCC
Q 023642 162 DILAKSL-----RWTVTDTSLS----PDQRH-LVYASMSPIVHIVDVGS------GTMESLANVTEIHDGLDFSA--ADD 223 (279)
Q Consensus 162 ~~~~~~~-----~~~v~~~~~s----p~~~~-l~~~~~d~~i~i~d~~~------~~~~~~~~~~~~~~~~~~~~--~~~ 223 (279)
...| ...|.+++|+ |++++ |++++.|+.|++||+.+ +....... ...+.+ ...
T Consensus 112 ---~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 182 (397)
T 1sq9_A 112 ---LDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSP------TLELQGTVESP 182 (397)
T ss_dssp ---ECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCC------EEEEEEEECCS
T ss_pred ---ecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccC------cceeeeeeccc
Confidence 3456 4789999999 99999 99999999999999987 44322100 001111 000
Q ss_pred CCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC---C---CcceeEEEe
Q 023642 224 GGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA---H---TVNIALWIT 277 (279)
Q Consensus 224 ~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~---h---~~~v~~v~~ 277 (279)
..|...|.+++|+|++ +|++++.|+.|++||+++++++..+.+ | ...|.++..
T Consensus 183 ~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 183 MTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKF 241 (397)
T ss_dssp SSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEE
T ss_pred cCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccccCCccceEEE
Confidence 1255689999999999 999999999999999999999999999 9 999988865
No 108
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.84 E-value=1.1e-19 Score=154.30 Aligned_cols=154 Identities=11% Similarity=0.076 Sum_probs=115.5
Q ss_pred ccccceEeeeeecCC----------------CCceeeCCCCCeEEEEECCCCCEEEEEeCCCc-EEEEEcCCCeEEeeee
Q 023642 101 AADCCHMLSRYLPVN----------------GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQ-IRIYDVERGWKIQKDI 163 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~----------------~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~-i~iwd~~~~~~~~~~~ 163 (279)
..++.+.+|++.... ....+.+|.+.|++++|+|++++|++|+.|++ |++||+.+++++..+.
T Consensus 156 ~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~ 235 (355)
T 3vu4_A 156 FNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFR 235 (355)
T ss_dssp SCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEE
T ss_pred CcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 467788899887543 14668999999999999999999999999998 9999999998776521
Q ss_pred eccC-CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccc---------cceeEEeeCCCCCccccEEEE
Q 023642 164 LAKS-LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEI---------HDGLDFSAADDGGYSFGIFSL 233 (279)
Q Consensus 164 ~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~v~~~ 233 (279)
.+ |...|.+++|+|++++|++++.|++|++||+..+........... ..-..+.-.. ........+
T Consensus 236 --~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~ 311 (355)
T 3vu4_A 236 --RGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSV--DKHVRGCKI 311 (355)
T ss_dssp --CTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCC--CTTCCCCEE
T ss_pred --cCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEecc--CCCCCceEE
Confidence 24 888999999999999999999999999999987643211111100 0000011000 111234668
Q ss_pred EEecCCCEEEEecCCCeEEEEECCC
Q 023642 234 KFSTDGRELVAGSSDDCIYVYDLEA 258 (279)
Q Consensus 234 ~~sp~g~~l~t~s~d~~i~vwd~~~ 258 (279)
+|++++++|++++.|+.+++|++..
T Consensus 312 a~~~d~~~l~~~~~dg~~~~~~~~~ 336 (355)
T 3vu4_A 312 AWISESSLVVVWPHTRMIETFKVVF 336 (355)
T ss_dssp EESSSSEEEEEETTTTEEEEEEEEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEEEEc
Confidence 9999999999999999999999865
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.84 E-value=4.8e-20 Score=155.61 Aligned_cols=157 Identities=8% Similarity=0.003 Sum_probs=126.3
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC---------CCeEEeeeeeccCCCc
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVE---------RGWKIQKDILAKSLRW 170 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~---------~~~~~~~~~~~~~~~~ 170 (279)
++.|+.+.+|++........+. ...|.++.|+|+ +++++.|++|++|+.. +++.+.. ...+|..
T Consensus 54 g~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~--~~~~~~~ 126 (343)
T 3lrv_A 54 RCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNKVLRE--IEVDSAN 126 (343)
T ss_dssp EEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCCEEEE--EECCCSS
T ss_pred ECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcceeEE--eecCCCC
Confidence 5678999999987665554454 567888889998 9999999999999766 3333332 1236667
Q ss_pred ceEEEEECC--CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC
Q 023642 171 TVTDTSLSP--DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD 248 (279)
Q Consensus 171 ~v~~~~~sp--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d 248 (279)
.|.+++|+| +++++++++.|+.|++||+++++....... .|...+.+++|+|+|.+|++|+.|
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~---------------~~~~~i~~~~~~pdg~~lasg~~d 191 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSA---------------KSDVEYSSGVLHKDSLLLALYSPD 191 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECC---------------CSSCCCCEEEECTTSCEEEEECTT
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEec---------------CCCCceEEEEECCCCCEEEEEcCC
Confidence 899999999 999999999999999999998886332211 133479999999999999999999
Q ss_pred CeEEEEECCCCeEE-EEEeC-CCcceeEEEee
Q 023642 249 DCIYVYDLEANKLS-LRILA-HTVNIALWITC 278 (279)
Q Consensus 249 ~~i~vwd~~~~~~~-~~~~~-h~~~v~~v~~~ 278 (279)
+.|++||+++++.+ ..+.+ |...|+++..+
T Consensus 192 g~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs 223 (343)
T 3lrv_A 192 GILDVYNLSSPDQASSRFPVDEEAKIKEVKFA 223 (343)
T ss_dssp SCEEEEESSCTTSCCEECCCCTTSCEEEEEEC
T ss_pred CEEEEEECCCCCCCccEEeccCCCCEEEEEEe
Confidence 99999999999888 88988 99999998753
No 110
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.84 E-value=5.6e-20 Score=159.47 Aligned_cols=171 Identities=13% Similarity=0.082 Sum_probs=121.8
Q ss_pred eccccceEeeeeecCCC-CceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEe-eeeeccCCCcceEEEEE
Q 023642 100 SAADCCHMLSRYLPVNG-PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQ-KDILAKSLRWTVTDTSL 177 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~-~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~ 177 (279)
.+.+..+.+|+...... ...+.+|...+..+.|+|+++++++++.|+.+++||..+++... .......|...|.+++|
T Consensus 205 gs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~ 284 (420)
T 4gga_A 205 GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 284 (420)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEE
T ss_pred EeCCCceeEeeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCCceeeeee
Confidence 34566677776554332 24578999999999999999999999999999999998764321 12234678889999999
Q ss_pred CCCCC-EEEEE--eCCCeEEEEECCCCceeeeeccccccceeEEeeCCC---------------------------CCcc
Q 023642 178 SPDQR-HLVYA--SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD---------------------------GGYS 227 (279)
Q Consensus 178 sp~~~-~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------~~~~ 227 (279)
+|++. .++++ +.|++|++||+.++..............+.+.+++. .+|.
T Consensus 285 ~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~ 364 (420)
T 4gga_A 285 CPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHT 364 (420)
T ss_dssp CTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCS
T ss_pred CCCcccEEEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCC
Confidence 99765 45543 479999999999988754443222222222221111 5799
Q ss_pred ccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCc
Q 023642 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTV 270 (279)
Q Consensus 228 ~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~ 270 (279)
..|++++|+|||++|+||+.|++|+|||+....+..+.+.+..
T Consensus 365 ~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~ 407 (420)
T 4gga_A 365 SRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRREREKA 407 (420)
T ss_dssp SCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC--------
T ss_pred CCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhhhccC
Confidence 9999999999999999999999999999987666666655544
No 111
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.83 E-value=4.4e-19 Score=154.47 Aligned_cols=155 Identities=19% Similarity=0.209 Sum_probs=132.4
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
++.|+.+.+|+.........+.+|...|.+++| ++++|++|+.||.|++||+.+++.+.. +..|...|.+++|++
T Consensus 149 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~l~~~~ 223 (435)
T 1p22_A 149 GLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNT---LIHHCEAVLHLRFNN 223 (435)
T ss_dssp EESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEE---ECCCCSCEEEEECCT
T ss_pred EeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEE---EcCCCCcEEEEEEcC
Confidence 567889999998777666778999999999999 789999999999999999999977655 467888999999974
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
.++++++.|+.|++||+.++........ +. +|...|.+++| ++++|++++.|+.|++||++++
T Consensus 224 --~~l~s~s~dg~i~vwd~~~~~~~~~~~~--------~~-----~~~~~v~~~~~--~~~~l~s~~~dg~i~vwd~~~~ 286 (435)
T 1p22_A 224 --GMMVTCSKDRSIAVWDMASPTDITLRRV--------LV-----GHRAAVNVVDF--DDKYIVSASGDRTIKVWNTSTC 286 (435)
T ss_dssp --TEEEEEETTSCEEEEECSSSSCCEEEEE--------EC-----CCSSCEEEEEE--ETTEEEEEETTSEEEEEETTTC
T ss_pred --CEEEEeeCCCcEEEEeCCCCCCceeeeE--------ec-----CCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCcC
Confidence 5999999999999999998765322111 11 26669999998 6889999999999999999999
Q ss_pred eEEEEEeCCCcceeEEE
Q 023642 260 KLSLRILAHTVNIALWI 276 (279)
Q Consensus 260 ~~~~~~~~h~~~v~~v~ 276 (279)
+++..+.+|...|.++.
T Consensus 287 ~~~~~~~~~~~~v~~~~ 303 (435)
T 1p22_A 287 EFVRTLNGHKRGIACLQ 303 (435)
T ss_dssp CEEEEEECCSSCEEEEE
T ss_pred cEEEEEcCCCCcEEEEE
Confidence 99999999999998875
No 112
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=5.2e-20 Score=160.50 Aligned_cols=131 Identities=15% Similarity=0.098 Sum_probs=106.9
Q ss_pred CCCCCeEEEEECCCCCEEE----EEeCCCcEEEEEcCCC--------eEEeeeeeccCCCcceEEEEECCC-CCEEEEEe
Q 023642 122 QTTSRAYVSQFSADGSLFV----AGFQASQIRIYDVERG--------WKIQKDILAKSLRWTVTDTSLSPD-QRHLVYAS 188 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~----s~~~d~~i~iwd~~~~--------~~~~~~~~~~~~~~~v~~~~~sp~-~~~l~~~~ 188 (279)
.+...|.+++|+|++++|+ +|+.|+.|++||+.++ +.+.......+|...|.+++|+|+ +.+|++++
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s 169 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCL 169 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEE
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEE
Confidence 4667899999999999999 7889999999998754 222223345678899999999998 78999999
Q ss_pred CCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 189 MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 189 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
.|++|++||++++...... . +|...|.+++|+|+|++|++|+.|++|++||++ ++....+..|
T Consensus 170 ~Dg~v~iwD~~~~~~~~~~-----------~-----~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~ 232 (434)
T 2oit_A 170 ADGSIAVLQVTETVKVCAT-----------L-----PSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCP 232 (434)
T ss_dssp TTSCEEEEEESSSEEEEEE-----------E-----CGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCC
T ss_pred CCCeEEEEEcCCCcceeec-----------c-----CCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCC
Confidence 9999999999987542111 1 155689999999999999999999999999998 6677777655
Q ss_pred C
Q 023642 269 T 269 (279)
Q Consensus 269 ~ 269 (279)
.
T Consensus 233 ~ 233 (434)
T 2oit_A 233 P 233 (434)
T ss_dssp T
T ss_pred c
Confidence 3
No 113
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.83 E-value=1.5e-19 Score=170.73 Aligned_cols=136 Identities=15% Similarity=0.122 Sum_probs=115.7
Q ss_pred eeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECC
Q 023642 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~ 199 (279)
..+|.+.|++++|+|++++||+|+.|+.|+|||....+.... ..|..+|.+++|+| +++|++++.|++|++||+.
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~----~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~ 87 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIK----LEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLY 87 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEE----CSSCCCEEEEEEET-TTEEEEEETTCEEEEEETT
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEE----cCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECC
Confidence 458999999999999999999999999999999988765432 35777899999999 8899999999999999999
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEE-----------EEEeCC
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS-----------LRILAH 268 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~-----------~~~~~h 268 (279)
+++...... |...|++++|+|++++|++|+.|++|++||++++++. ..+.+|
T Consensus 88 ~~~~~~~~~-----------------~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h 150 (902)
T 2oaj_A 88 SQKVLTTVF-----------------VPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAAR 150 (902)
T ss_dssp TCSEEEEEE-----------------CSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSC
T ss_pred CCcEEEEEc-----------------CCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccC
Confidence 987643221 3348999999999999999999999999999988764 234678
Q ss_pred CcceeEEEe
Q 023642 269 TVNIALWIT 277 (279)
Q Consensus 269 ~~~v~~v~~ 277 (279)
...|+++..
T Consensus 151 ~~~V~sl~~ 159 (902)
T 2oaj_A 151 LSPIVSIQW 159 (902)
T ss_dssp CCCCCEEEE
T ss_pred CCCeEEEEE
Confidence 888888764
No 114
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.83 E-value=2.1e-19 Score=166.97 Aligned_cols=145 Identities=17% Similarity=0.081 Sum_probs=117.7
Q ss_pred ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCC--CCEEEEEeCCCeEEE
Q 023642 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD--QRHLVYASMSPIVHI 195 (279)
Q Consensus 118 ~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~d~~i~i 195 (279)
.++.+|.+.|++++|+|++++|++|+.||.|++||+..+... ....+.+|.++|.+++|+|+ +++|++++.||.|++
T Consensus 3 ~~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~-~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~v 81 (753)
T 3jro_A 3 VIANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK-LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLI 81 (753)
T ss_dssp -----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEE-EEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEE
T ss_pred eecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCc-cceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEE
Confidence 357899999999999999999999999999999999854322 22345789999999999998 999999999999999
Q ss_pred EECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC--CCEEEEecCCCeEEEEECCCC--eEEEEEeCCCcc
Q 023642 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD--GRELVAGSSDDCIYVYDLEAN--KLSLRILAHTVN 271 (279)
Q Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--g~~l~t~s~d~~i~vwd~~~~--~~~~~~~~h~~~ 271 (279)
||+.++........ . +|...|.+++|+|+ +.++++++.|+.|++||++++ .....+.+|...
T Consensus 82 wd~~~~~~~~~~~~---------~-----~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~ 147 (753)
T 3jro_A 82 WKEENGRWSQIAVH---------A-----VHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIG 147 (753)
T ss_dssp EEEETTEEEEEEEE---------C-----CCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSC
T ss_pred EECCCCcccccccc---------c-----CCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCc
Confidence 99998763222211 1 26669999999999 999999999999999999887 355677889999
Q ss_pred eeEEEe
Q 023642 272 IALWIT 277 (279)
Q Consensus 272 v~~v~~ 277 (279)
|.++..
T Consensus 148 v~~l~~ 153 (753)
T 3jro_A 148 VNSASW 153 (753)
T ss_dssp EEEEEE
T ss_pred eEEEEe
Confidence 988865
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.83 E-value=1.5e-19 Score=150.14 Aligned_cols=139 Identities=14% Similarity=0.076 Sum_probs=104.2
Q ss_pred eccccceEeeeeecCCCCceeeCCC---CCeEEEEECCCCCEE------------EEEeCCCcEEEEEcCCCeEEeeeee
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTT---SRAYVSQFSADGSLF------------VAGFQASQIRIYDVERGWKIQKDIL 164 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~---~~V~~~~~spd~~~l------------~s~~~d~~i~iwd~~~~~~~~~~~~ 164 (279)
.+.|+.+.+|++...+...++.+|. ..|.+++|+|+|.++ ++|+.|++|++||..+++.+.....
T Consensus 199 gS~D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~ 278 (356)
T 2w18_A 199 TTIMNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLY 278 (356)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEE
T ss_pred ecCCCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEe
Confidence 4679999999998777667787654 467888999999986 5688899999999999977654221
Q ss_pred --ccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccE-EEEEEecCCCE
Q 023642 165 --AKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGI-FSLKFSTDGRE 241 (279)
Q Consensus 165 --~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~~~~~sp~g~~ 241 (279)
..+|...+.+..+ ++.++++++.|++|+|||+.++++..... +|...+ ..++|+|||++
T Consensus 279 ~~p~Gh~~~~lsg~~--sg~~lASgS~DgTIkIWDl~tGk~l~tL~----------------gH~~~vvs~vafSPDG~~ 340 (356)
T 2w18_A 279 CLPPGQAGRFLEGDV--KDHCAAAILTSGTIAIWDLLLGQCTALLP----------------PVSDQHWSFVKWSGTDSH 340 (356)
T ss_dssp CCCTTCCCCEEEEEE--ETTEEEEEETTSCEEEEETTTCSEEEEEC----------------CC--CCCCEEEECSSSSE
T ss_pred eccCCCcceeEcccc--CCCEEEEEcCCCcEEEEECCCCcEEEEec----------------CCCCCeEEEEEECCCCCE
Confidence 2356554443333 48899999999999999999998754321 143344 46899999999
Q ss_pred EEEecCCCeEEEEEC
Q 023642 242 LVAGSSDDCIYVYDL 256 (279)
Q Consensus 242 l~t~s~d~~i~vwd~ 256 (279)
|++|+.|++|+|||+
T Consensus 341 LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 341 LLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEECTTSCEEEEEE
T ss_pred EEEEECCCcEEEecC
Confidence 999999999999995
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.82 E-value=1.7e-19 Score=151.27 Aligned_cols=173 Identities=10% Similarity=0.044 Sum_probs=133.5
Q ss_pred eccccceEeeeeecCCC---CceeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEc-CCCeEEeeeeeccC--CCcce
Q 023642 100 SAADCCHMLSRYLPVNG---PWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDV-ERGWKIQKDILAKS--LRWTV 172 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~---~~~l~~h~~~V~~~~~spd~~-~l~s~~~d~~i~iwd~-~~~~~~~~~~~~~~--~~~~v 172 (279)
.+.|+.+.+|++..... ...+.+|...|.+++|+|+++ +|++|+.|+.|++||+ .++... .+.. |...|
T Consensus 29 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~----~~~~~~~~~~v 104 (342)
T 1yfq_A 29 TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQ----ALTNNEANLGI 104 (342)
T ss_dssp EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEE----ECBSCCCCSCE
T ss_pred EcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceE----eccccCCCCce
Confidence 45788899999876652 345679999999999999999 9999999999999999 877542 2456 89999
Q ss_pred EEEEECCCCCEEEEEeCCCeEEEEECCC---------CceeeeeccccccceeEE-----------------eeCC-C--
Q 023642 173 TDTSLSPDQRHLVYASMSPIVHIVDVGS---------GTMESLANVTEIHDGLDF-----------------SAAD-D-- 223 (279)
Q Consensus 173 ~~~~~sp~~~~l~~~~~d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~-----------------~~~~-~-- 223 (279)
.+++|+| +.+|++++.|+.|++||+++ ++.............+.+ .... .
T Consensus 105 ~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 183 (342)
T 1yfq_A 105 CRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDD 183 (342)
T ss_dssp EEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTC
T ss_pred EEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccc
Confidence 9999999 99999999999999999876 443211111111111111 1001 0
Q ss_pred ------CCccccEEEEEEec-CCCEEEEecCCCeEEEEECCCC------eEEEEEeCCCc---------ceeEEEe
Q 023642 224 ------GGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEAN------KLSLRILAHTV---------NIALWIT 277 (279)
Q Consensus 224 ------~~~~~~v~~~~~sp-~g~~l~t~s~d~~i~vwd~~~~------~~~~~~~~h~~---------~v~~v~~ 277 (279)
..|...+.+++|+| +++++++++.|+.|++|++..+ +....+.+|.. .|+++..
T Consensus 184 ~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 259 (342)
T 1yfq_A 184 NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEF 259 (342)
T ss_dssp CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEE
T ss_pred cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEE
Confidence 23567899999999 9999999999999999999887 78888988866 8887754
No 117
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.82 E-value=1.6e-18 Score=143.84 Aligned_cols=164 Identities=15% Similarity=0.175 Sum_probs=117.3
Q ss_pred eecCCCCceeeC--CCC--CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEE
Q 023642 111 YLPVNGPWPVDQ--TTS--RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY 186 (279)
Q Consensus 111 ~~~~~~~~~l~~--h~~--~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~ 186 (279)
+.|..+..+|.. ..+ .+++++||+++ +|++| .|++|+|||+.+++++.. ....+|...|.+++|+|++++|++
T Consensus 8 ~~p~~p~rvldap~~~~d~y~~~l~WS~~~-~lAvg-~D~tV~iWd~~tg~~~~~-~~~~~~~~~V~~v~~~~~~~~l~s 84 (318)
T 4ggc_A 8 YIPSLPDRILDAPEIRNDYYLNLVDWSSGN-VLAVA-LDNSVYLWSASSGDILQL-LQMEQPGEYISSVAWIKEGNYLAV 84 (318)
T ss_dssp CCCSSCSEEEECTTCCCCTTCBCEEECTTS-EEEEE-ETTEEEEEETTTCCEEEE-EECCSTTCCEEEEEECTTSSEEEE
T ss_pred ccCCCCCEEeeCCCCcccccceEEEECCCC-EEEEE-eCCEEEEEECCCCCEEEE-EEecCCCCeEEEEEECCCCCEEEE
Confidence 344444445532 222 35789999986 66665 489999999999977654 345678889999999999999999
Q ss_pred EeCCCeEEEEECCCCceeeeeccccc-ccee------EEeeCCC------------------CCccccEEEEEEecCCCE
Q 023642 187 ASMSPIVHIVDVGSGTMESLANVTEI-HDGL------DFSAADD------------------GGYSFGIFSLKFSTDGRE 241 (279)
Q Consensus 187 ~~~d~~i~i~d~~~~~~~~~~~~~~~-~~~~------~~~~~~~------------------~~~~~~v~~~~~sp~g~~ 241 (279)
|+.|++|++||+++++.......... .... ...+..+ .+|...+..+.|++++++
T Consensus 85 gs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (318)
T 4ggc_A 85 GTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH 164 (318)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred EECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCE
Confidence 99999999999999886433221110 0000 0000000 357788999999999999
Q ss_pred EEEecCCCeEEEEECCCCe----EEEEEeCCCcceeEEEe
Q 023642 242 LVAGSSDDCIYVYDLEANK----LSLRILAHTVNIALWIT 277 (279)
Q Consensus 242 l~t~s~d~~i~vwd~~~~~----~~~~~~~h~~~v~~v~~ 277 (279)
|++++.|++|++||+++++ .......|...|.++..
T Consensus 165 l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 204 (318)
T 4ggc_A 165 LASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAW 204 (318)
T ss_dssp EEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEE
T ss_pred EEEEecCcceeEEECCCCcccccceeeecccCCceEEEEe
Confidence 9999999999999998764 34555567777766543
No 118
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.82 E-value=1.5e-18 Score=156.63 Aligned_cols=147 Identities=15% Similarity=0.128 Sum_probs=122.9
Q ss_pred ceEeeeeecCCCCceeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCc---ceEEEEECCC
Q 023642 105 CHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRW---TVTDTSLSPD 180 (279)
Q Consensus 105 ~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~sp~ 180 (279)
.+.+|+ .......+.+|...|.+++|+|+++ +|++++.|+.|++||+.+++.+.. +..|.. .|.+++|+|+
T Consensus 143 ~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~---~~~~~~~~~~v~~~~~~~~ 217 (615)
T 1pgu_A 143 VFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSAS---DRTHHKQGSFVRDVEFSPD 217 (615)
T ss_dssp EEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEE---ECSSSCTTCCEEEEEECST
T ss_pred EEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeee---ecccCCCCceEEEEEECCC
Confidence 555555 3334455789999999999999998 899999999999999998876654 457887 8999999999
Q ss_pred -CCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 181 -QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 181 -~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
+++|++++.|+.|++||+.+++........ ..+|...|.+++|+ ++++|++++.|+.|++||++++
T Consensus 218 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~------------~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~ 284 (615)
T 1pgu_A 218 SGEFVITVGSDRKISCFDGKSGEFLKYIEDD------------QEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTS 284 (615)
T ss_dssp TCCEEEEEETTCCEEEEETTTCCEEEECCBT------------TBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTT
T ss_pred CCCEEEEEeCCCeEEEEECCCCCEeEEeccc------------ccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCC
Confidence 999999999999999999988764432000 00166699999999 9999999999999999999999
Q ss_pred eEEEEEeCCC
Q 023642 260 KLSLRILAHT 269 (279)
Q Consensus 260 ~~~~~~~~h~ 269 (279)
+++..+..+.
T Consensus 285 ~~~~~~~~~~ 294 (615)
T 1pgu_A 285 KCVQKWTLDK 294 (615)
T ss_dssp EEEEEEECCT
T ss_pred cEEEEEcCCC
Confidence 9999999873
No 119
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.82 E-value=5.1e-19 Score=149.08 Aligned_cols=159 Identities=11% Similarity=0.086 Sum_probs=124.3
Q ss_pred ccceEeeeeecCCCCce-eeCCCCCeEEEEECCC---CCEEEEEeCCCcEEEEEcCCCe-EEeeeeeccCCCcceEEEE-
Q 023642 103 DCCHMLSRYLPVNGPWP-VDQTTSRAYVSQFSAD---GSLFVAGFQASQIRIYDVERGW-KIQKDILAKSLRWTVTDTS- 176 (279)
Q Consensus 103 d~~~~~~~~~~~~~~~~-l~~h~~~V~~~~~spd---~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~v~~~~- 176 (279)
|+.+.+|++........ ..+|...|.+++|+|+ +.+|++|+.|+.|++||+.++. .... +..|...|.+++
T Consensus 43 d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~---~~~~~~~v~~~~~ 119 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYS---VKGHKEIINAIDG 119 (357)
T ss_dssp CEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEE---ECCCSSCEEEEEE
T ss_pred CcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEE---EEecccceEEEee
Confidence 78899999876554333 3489999999999998 6999999999999999999876 4333 568899999995
Q ss_pred -----ECCCCCEEEEEeCCCeEEEEECCCCc-eeeeeccccccceeEEeeCCCCCccccEEEEE----EecCCCEEEEec
Q 023642 177 -----LSPDQRHLVYASMSPIVHIVDVGSGT-MESLANVTEIHDGLDFSAADDGGYSFGIFSLK----FSTDGRELVAGS 246 (279)
Q Consensus 177 -----~sp~~~~l~~~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~----~sp~g~~l~t~s 246 (279)
|+|++++|++++.|+.|++||+.++. ....... +.. .+...+.+++ |+|++++|++++
T Consensus 120 ~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~-----------~~~-~~~~~v~~~~~~~~~~~~~~~l~~~~ 187 (357)
T 3i2n_A 120 IGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEP-----------VQG-ENKRDCWTVAFGNAYNQEERVVCAGY 187 (357)
T ss_dssp ESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECC-----------CTT-SCCCCEEEEEEECCCC-CCCEEEEEE
T ss_pred ccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccc-----------cCC-CCCCceEEEEEEeccCCCCCEEEEEc
Confidence 57899999999999999999999876 2221111 000 0233788888 788999999999
Q ss_pred CCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 247 SDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 247 ~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.|+.|++||+++++.... ..|...|.++..
T Consensus 188 ~d~~i~i~d~~~~~~~~~-~~~~~~v~~~~~ 217 (357)
T 3i2n_A 188 DNGDIKLFDLRNMALRWE-TNIKNGVCSLEF 217 (357)
T ss_dssp TTSEEEEEETTTTEEEEE-EECSSCEEEEEE
T ss_pred cCCeEEEEECccCceeee-cCCCCceEEEEc
Confidence 999999999999987544 568888888765
No 120
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.82 E-value=1.7e-18 Score=151.06 Aligned_cols=167 Identities=20% Similarity=0.254 Sum_probs=115.8
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
++.|+.+.+|++........+.+|...|.+++|+ +++|++|+.|+.|++||+.+++.... +.+|...|.+++|+
T Consensus 135 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~---~~~h~~~v~~~~~~- 208 (445)
T 2ovr_B 135 GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHT---LYGHTSTVRCMHLH- 208 (445)
T ss_dssp EETTSCEEEEETTTCCEEEECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEE---ECCCSSCEEEEEEE-
T ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEE---ECCCCCcEEEEEec-
Confidence 5678899999987776667789999999999997 57999999999999999999977654 46888899999995
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeecc-ccccceeEE------eeCCC-----------------CCccccEEEEEE
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLANV-TEIHDGLDF------SAADD-----------------GGYSFGIFSLKF 235 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~------~~~~~-----------------~~~~~~v~~~~~ 235 (279)
+..+++++.|+.|++||+.+++....... ......+.+ .+..+ .+|...|.++.|
T Consensus 209 -~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~ 287 (445)
T 2ovr_B 209 -EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF 287 (445)
T ss_dssp -TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE
T ss_pred -CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE
Confidence 57899999999999999998876433221 000000011 00000 335555555555
Q ss_pred ecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEE
Q 023642 236 STDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALW 275 (279)
Q Consensus 236 sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v 275 (279)
++.++++++.|+.|++||+++++++..+.+|...+.++
T Consensus 288 --~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~ 325 (445)
T 2ovr_B 288 --DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGM 325 (445)
T ss_dssp --CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEE
T ss_pred --CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEE
Confidence 55555555555555555555555555555555555443
No 121
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.81 E-value=3.1e-19 Score=153.57 Aligned_cols=178 Identities=10% Similarity=-0.002 Sum_probs=120.0
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeEEeee----------------
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKD---------------- 162 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~~~~~~---------------- 162 (279)
.+.|+++++|++........+.+|...|.+++|+|++. +|++|+.|++|++||+.+++.....
T Consensus 162 ~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~ 241 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNT 241 (393)
T ss_dssp EETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEES
T ss_pred EECCCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccc
Confidence 46799999999987766677889999999999999874 7999999999999999887443211
Q ss_pred ------eeccCCCcceEEEEEC-CCCCEEEEEeCCCeEEEEECCCCceeeeeccc-cccceeEEeeCCC--CCccccEEE
Q 023642 163 ------ILAKSLRWTVTDTSLS-PDQRHLVYASMSPIVHIVDVGSGTMESLANVT-EIHDGLDFSAADD--GGYSFGIFS 232 (279)
Q Consensus 163 ------~~~~~~~~~v~~~~~s-p~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~--~~~~~~v~~ 232 (279)
....+|...+.++.|+ ||++.|++++.|+++++||+..+......... .......+.+... ..+...+ .
T Consensus 242 ~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~-~ 320 (393)
T 4gq1_A 242 LPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLL-G 320 (393)
T ss_dssp GGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSSCCSS-C
T ss_pred ccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcce-e
Confidence 0123677788999986 79999999999999999999876642211100 0000000000000 0011122 3
Q ss_pred EEEec--CCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEee
Q 023642 233 LKFST--DGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWITC 278 (279)
Q Consensus 233 ~~~sp--~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~~ 278 (279)
..|+| ++.++++|+.|++|++||+.+++++..+.+|..+|+++.+.
T Consensus 321 ~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafs 368 (393)
T 4gq1_A 321 ACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWH 368 (393)
T ss_dssp CEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEEC
T ss_pred EEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEc
Confidence 34444 34467788899999999999999999999999999998753
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.80 E-value=2e-18 Score=146.58 Aligned_cols=147 Identities=16% Similarity=0.111 Sum_probs=107.4
Q ss_pred CCCCeeeccccceEeeeeecC-CCCceeeCCCCCeEEEEECCCCCEEEE--EeCCCcEEEEEcCCCeEE-----------
Q 023642 94 SGRGRFSAADCCHMLSRYLPV-NGPWPVDQTTSRAYVSQFSADGSLFVA--GFQASQIRIYDVERGWKI----------- 159 (279)
Q Consensus 94 ~~~~~~~~~d~~~~~~~~~~~-~~~~~l~~h~~~V~~~~~spd~~~l~s--~~~d~~i~iwd~~~~~~~----------- 159 (279)
++...+...++.+.+|++... .....+.. +...++++| .+++. |+.||.|++||+.++...
T Consensus 109 ~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~ 183 (355)
T 3vu4_A 109 SREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKA 183 (355)
T ss_dssp CSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET--TEEEEEESSCTTCEEEEECCC---------------
T ss_pred cCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccc
Confidence 344444556677777776654 33333333 455566666 56655 588999999999876410
Q ss_pred -ee-eeeccCCCcceEEEEECCCCCEEEEEeCCCe-EEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEe
Q 023642 160 -QK-DILAKSLRWTVTDTSLSPDQRHLVYASMSPI-VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS 236 (279)
Q Consensus 160 -~~-~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 236 (279)
.. ...+.+|...|.+++|+|+|++|++++.|++ |++||+++++....... + .|...|.+++|+
T Consensus 184 ~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~----------g----~h~~~v~~~~~s 249 (355)
T 3vu4_A 184 ILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRR----------G----LDRADVVDMKWS 249 (355)
T ss_dssp ---CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEEC----------T----TCCSCEEEEEEC
T ss_pred cCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEc----------C----CCCCcEEEEEEC
Confidence 00 2345789999999999999999999999998 99999999886532210 1 155699999999
Q ss_pred cCCCEEEEecCCCeEEEEECCCC
Q 023642 237 TDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 237 p~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
|+|++|++++.|++|++||++.+
T Consensus 250 ~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 250 TDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp TTSCEEEEEETTCEEEEEESSCC
T ss_pred CCCCEEEEEECCCEEEEEEccCC
Confidence 99999999999999999999764
No 123
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.79 E-value=6.8e-18 Score=147.25 Aligned_cols=166 Identities=16% Similarity=0.150 Sum_probs=128.1
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
.+.|+.+.+|++........+.+|...|.+++|+ +..+++|+.|+.|++||+.+++.+.. +..|...|.+++|
T Consensus 175 ~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~---~~~~~~~v~~~~~-- 247 (445)
T 2ovr_B 175 GSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHV---LMGHVAAVRCVQY-- 247 (445)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEE---EECCSSCEEEEEE--
T ss_pred EeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEE---EcCCcccEEEEEE--
Confidence 4678899999987766666788999999999995 57899999999999999999877654 4578889999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeec-cccccceeEE------eeCCC-----------------CCccccEEEEEE
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLAN-VTEIHDGLDF------SAADD-----------------GGYSFGIFSLKF 235 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~------~~~~~-----------------~~~~~~v~~~~~ 235 (279)
++.++++++.|+.|++||+++++...... .......+.+ .+..+ .+|...+.++.
T Consensus 248 ~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~- 326 (445)
T 2ovr_B 248 DGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGME- 326 (445)
T ss_dssp CSSCEEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEE-
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEE-
Confidence 78899999999999999998877543322 1111111111 11111 45777776654
Q ss_pred ecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeE
Q 023642 236 STDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIAL 274 (279)
Q Consensus 236 sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~ 274 (279)
+++.+|++++.|+.|++||+++++++..+.++...-..
T Consensus 327 -~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~ 364 (445)
T 2ovr_B 327 -LKDNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSA 364 (445)
T ss_dssp -EETTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSC
T ss_pred -EeCCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCC
Confidence 59999999999999999999999999999987765433
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.75 E-value=1.6e-16 Score=135.78 Aligned_cols=154 Identities=15% Similarity=0.140 Sum_probs=119.0
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEEC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLS 178 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s 178 (279)
.+.++.+.+|++........+..|. .+.+++|+|+++++ ++++.|+.|++||+.+++..... ..+ ..+.+++|+
T Consensus 8 ~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~---~~~-~~v~~~~~s 82 (391)
T 1l0q_A 8 NSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATV---PAG-SSPQGVAVS 82 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEE---ECS-SSEEEEEEC
T ss_pred cCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEE---ECC-CCccceEEC
Confidence 3467788888876554444566664 58999999999987 67779999999999999776542 222 279999999
Q ss_pred CCCCEEEEE-eCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEE-EEecCCCeEEEEEC
Q 023642 179 PDQRHLVYA-SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDL 256 (279)
Q Consensus 179 p~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~t~s~d~~i~vwd~ 256 (279)
|++++|+.+ +.++.|++||+.+++...... +...+.+++|+|++++| ++++.++.|++||+
T Consensus 83 pdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~-----------------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~ 145 (391)
T 1l0q_A 83 PDGKQVYVTNMASSTLSVIDTTSNTVAGTVK-----------------TGKSPLGLALSPDGKKLYVTNNGDKTVSVINT 145 (391)
T ss_dssp TTSSEEEEEETTTTEEEEEETTTTEEEEEEE-----------------CSSSEEEEEECTTSSEEEEEETTTTEEEEEET
T ss_pred CCCCEEEEEECCCCEEEEEECCCCeEEEEEe-----------------CCCCcceEEECCCCCEEEEEeCCCCEEEEEEC
Confidence 999988654 467999999999987644322 12268999999999977 68888999999999
Q ss_pred CCCeEEEEEeCCCcceeEEE
Q 023642 257 EANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 257 ~~~~~~~~~~~h~~~v~~v~ 276 (279)
.+++.+..+..|.. +.++.
T Consensus 146 ~~~~~~~~~~~~~~-~~~~~ 164 (391)
T 1l0q_A 146 VTKAVINTVSVGRS-PKGIA 164 (391)
T ss_dssp TTTEEEEEEECCSS-EEEEE
T ss_pred CCCcEEEEEecCCC-cceEE
Confidence 99999999887644 34443
No 125
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.75 E-value=2.1e-16 Score=136.98 Aligned_cols=150 Identities=17% Similarity=0.125 Sum_probs=116.2
Q ss_pred cceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCC---cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCC
Q 023642 104 CCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQAS---QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD 180 (279)
Q Consensus 104 ~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~---~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 180 (279)
..+.+|+.. ......+.+|...|.+++|+|||++|++++.++ .|++||+.+++... +..|...+.+++|+||
T Consensus 159 ~~i~i~d~~-g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~----l~~~~~~~~~~~~spd 233 (415)
T 2hqs_A 159 YELRVSDYD-GYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ----VASFPRHNGAPAFSPD 233 (415)
T ss_dssp EEEEEEETT-SCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE----EECCSSCEEEEEECTT
T ss_pred ceEEEEcCC-CCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE----eecCCCcccCEEEcCC
Confidence 577788764 445677889999999999999999999999875 99999999986543 3466778999999999
Q ss_pred CCEEE-EEeCCC--eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC-CC--eEEEE
Q 023642 181 QRHLV-YASMSP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DD--CIYVY 254 (279)
Q Consensus 181 ~~~l~-~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~-d~--~i~vw 254 (279)
|++|+ +++.++ .|++||+.+++...+.. |...+.+++|+|||++|++++. ++ .|++|
T Consensus 234 g~~la~~~~~~g~~~i~~~d~~~~~~~~l~~-----------------~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~ 296 (415)
T 2hqs_A 234 GSKLAFALSKTGSLNLYVMDLASGQIRQVTD-----------------GRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKV 296 (415)
T ss_dssp SSEEEEEECTTSSCEEEEEETTTCCEEECCC-----------------CSSCEEEEEECTTSSEEEEEECTTSSCEEEEE
T ss_pred CCEEEEEEecCCCceEEEEECCCCCEEeCcC-----------------CCCcccceEECCCCCEEEEEECCCCCcEEEEE
Confidence 99887 566555 49999999887643221 4457999999999999988775 44 78888
Q ss_pred ECCCCeEEEEEeCCCcceeEEE
Q 023642 255 DLEANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 255 d~~~~~~~~~~~~h~~~v~~v~ 276 (279)
|+.+++. ..+..|...+.++.
T Consensus 297 d~~~~~~-~~l~~~~~~~~~~~ 317 (415)
T 2hqs_A 297 NINGGAP-QRITWEGSQNQDAD 317 (415)
T ss_dssp ETTSSCC-EECCCSSSEEEEEE
T ss_pred ECCCCCE-EEEecCCCcccCeE
Confidence 9988764 44555655665554
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.74 E-value=5.6e-16 Score=132.47 Aligned_cols=178 Identities=15% Similarity=0.076 Sum_probs=127.6
Q ss_pred ccCCCCee----eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEE-EeCCCcEEEEEcCCCeEEeeeeecc
Q 023642 92 NYSGRGRF----SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVA-GFQASQIRIYDVERGWKIQKDILAK 166 (279)
Q Consensus 92 ~~~~~~~~----~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s-~~~d~~i~iwd~~~~~~~~~~~~~~ 166 (279)
.+++++.+ .+.++.+.+|++...+....+..+. .+.+++|+|++++|+. ++.++.|++||+.+++.+...
T Consensus 38 ~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~---- 112 (391)
T 1l0q_A 38 VISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTV---- 112 (391)
T ss_dssp EECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE----
T ss_pred EECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEE----
Confidence 45666652 2367888888875544444455444 9999999999998855 556799999999998766542
Q ss_pred CCCcceEEEEECCCCCEE-EEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCC----------------------
Q 023642 167 SLRWTVTDTSLSPDQRHL-VYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD---------------------- 223 (279)
Q Consensus 167 ~~~~~v~~~~~sp~~~~l-~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------- 223 (279)
.+...+.+++|+|++++| ++++.++.|++||+.+++.............+.|.+++.
T Consensus 113 ~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~ 192 (391)
T 1l0q_A 113 KTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSV 192 (391)
T ss_dssp ECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred eCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeE
Confidence 233468999999999987 677889999999999887654433222222222322221
Q ss_pred ---CCccccEEEEEEecCCCEEEEec---CCCeEEEEECCCCeEEEEEeCCCcceeEE
Q 023642 224 ---GGYSFGIFSLKFSTDGRELVAGS---SDDCIYVYDLEANKLSLRILAHTVNIALW 275 (279)
Q Consensus 224 ---~~~~~~v~~~~~sp~g~~l~t~s---~d~~i~vwd~~~~~~~~~~~~h~~~v~~v 275 (279)
-.+...+.+++|+|++++|++++ .++.|++||+.+++.+..+..|.. +.++
T Consensus 193 ~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~ 249 (391)
T 1l0q_A 193 IDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPD-PAGI 249 (391)
T ss_dssp EEEEECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSS-EEEE
T ss_pred EEEEecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCC-ccEE
Confidence 11345678999999999988887 689999999999999999987754 4444
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.73 E-value=5.6e-16 Score=134.23 Aligned_cols=180 Identities=16% Similarity=0.165 Sum_probs=129.0
Q ss_pred ccCCCCee---eccc---cceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEE-EEeCCC--cEEEEEcCCCeEEeee
Q 023642 92 NYSGRGRF---SAAD---CCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFV-AGFQAS--QIRIYDVERGWKIQKD 162 (279)
Q Consensus 92 ~~~~~~~~---~~~d---~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~-s~~~d~--~i~iwd~~~~~~~~~~ 162 (279)
.++++|+. .+.+ ..+.+|++.... ...+..|...+.+++|+|||++|+ +++.|+ .|++||+.+++..
T Consensus 185 ~~Spdg~~la~~s~~~~~~~i~~~d~~tg~-~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~--- 260 (415)
T 2hqs_A 185 AWSPDGSKLAYVTFESGRSALVIQTLANGA-VRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR--- 260 (415)
T ss_dssp EECTTSSEEEEEECTTSSCEEEEEETTTCC-EEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---
T ss_pred EEcCCCCEEEEEEecCCCcEEEEEECCCCc-EEEeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE---
Confidence 46788764 2333 367777765433 345788899999999999999887 666665 4999999988542
Q ss_pred eeccCCCcceEEEEECCCCCEEEEEeC-CC--eEEEEECCCCceeeeeccccccceeEEeeCCC----------------
Q 023642 163 ILAKSLRWTVTDTSLSPDQRHLVYASM-SP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADD---------------- 223 (279)
Q Consensus 163 ~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~---------------- 223 (279)
.+..|...+.+++|+|||++|++++. ++ .|++||+.+++...+...........|++++.
T Consensus 261 -~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~ 339 (415)
T 2hqs_A 261 -QVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAK 339 (415)
T ss_dssp -ECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred -eCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEE
Confidence 24567778999999999999988876 44 78888998876543322111111222222221
Q ss_pred -----------CCccccEEEEEEecCCCEEEEecCCC---eEEEEECCCCeEEEEEeCCCcceeEEEee
Q 023642 224 -----------GGYSFGIFSLKFSTDGRELVAGSSDD---CIYVYDLEANKLSLRILAHTVNIALWITC 278 (279)
Q Consensus 224 -----------~~~~~~v~~~~~sp~g~~l~t~s~d~---~i~vwd~~~~~~~~~~~~h~~~v~~v~~~ 278 (279)
..+ ..+.+++|+|+|++|++++.++ .|++||+. +.....+.+|.+.|+++.++
T Consensus 340 ~d~~~~~~~~l~~~-~~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l~~~~~~v~~~~~~ 406 (415)
T 2hqs_A 340 QDLATGGVQVLSST-FLDETPSLAPNGTMVIYSSSQGMGSVLNLVSTD-GRFKARLPATDGQVKFPAWS 406 (415)
T ss_dssp EETTTCCEEECCCS-SSCEEEEECTTSSEEEEEEEETTEEEEEEEETT-SCCEEECCCSSSEEEEEEEC
T ss_pred EECCCCCEEEecCC-CCcCCeEEcCCCCEEEEEEcCCCccEEEEEECC-CCcEEEeeCCCCCCcCCccc
Confidence 112 2688999999999999888766 79999987 66778899999999988764
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.73 E-value=2.3e-16 Score=136.69 Aligned_cols=164 Identities=13% Similarity=0.041 Sum_probs=124.7
Q ss_pred ccCCCCee---eccccceEeeeeecCCCCc-----eeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeee
Q 023642 92 NYSGRGRF---SAADCCHMLSRYLPVNGPW-----PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDI 163 (279)
Q Consensus 92 ~~~~~~~~---~~~d~~~~~~~~~~~~~~~-----~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~ 163 (279)
.+++.+.+ .+.++.+.+|+........ .+.+|...|.+++|+|+++++++++.|+.|++||+.+++....
T Consensus 129 ~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~-- 206 (433)
T 3bws_A 129 RFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKAT-- 206 (433)
T ss_dssp EESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEE--
T ss_pred EEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEE--
Confidence 34554443 2345678888865443333 3458999999999999999999999999999999998876654
Q ss_pred eccCCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEE
Q 023642 164 LAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL 242 (279)
Q Consensus 164 ~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 242 (279)
...|...+.+++|+|++++++++ +.|+.|++||+++++...... +...+.+++|+|+|++|
T Consensus 207 -~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~-----------------~~~~~~~~~~~~~g~~l 268 (433)
T 3bws_A 207 -VDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTD-----------------KIGLPRGLLLSKDGKEL 268 (433)
T ss_dssp -EECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECC-----------------CCSEEEEEEECTTSSEE
T ss_pred -EcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEec-----------------CCCCceEEEEcCCCCEE
Confidence 33677789999999999988554 479999999999887643221 11258999999999999
Q ss_pred EEec--------CCCeEEEEECCCCeEEEEEeCCCcceeEEE
Q 023642 243 VAGS--------SDDCIYVYDLEANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 243 ~t~s--------~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~ 276 (279)
++++ .|+.|++||+.+++.+..+. |...+.++.
T Consensus 269 ~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-~~~~~~~~~ 309 (433)
T 3bws_A 269 YIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-PPGNKRHIV 309 (433)
T ss_dssp EEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-EEECEEEEE
T ss_pred EEEECCCCccccCCCeEEEEECCCCcEEeecc-CCCCcceEE
Confidence 9887 48899999999998877663 444555443
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.72 E-value=1.3e-15 Score=131.96 Aligned_cols=163 Identities=13% Similarity=0.043 Sum_probs=125.9
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEEcCCCeEEeeeeeccCC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSL 168 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 168 (279)
+++++.+ .+.++.+.+|++........+..|...+.+++|+|++++++ +++.|+.|++||+.+++.+... .+
T Consensus 177 ~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~----~~ 252 (433)
T 3bws_A 177 IPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKT----DK 252 (433)
T ss_dssp EGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEC----CC
T ss_pred EcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEe----cC
Confidence 3445544 34567888888766555566788999999999999999885 4558999999999998765542 23
Q ss_pred CcceEEEEECCCCCEEEEEe--------CCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCC
Q 023642 169 RWTVTDTSLSPDQRHLVYAS--------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR 240 (279)
Q Consensus 169 ~~~v~~~~~sp~~~~l~~~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 240 (279)
...+.+++|+|++++|++++ .|+.|++||+.+++...... |...+.+++|+|+++
T Consensus 253 ~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~-----------------~~~~~~~~~~~~~g~ 315 (433)
T 3bws_A 253 IGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIG-----------------PPGNKRHIVSGNTEN 315 (433)
T ss_dssp CSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEE-----------------EEECEEEEEECSSTT
T ss_pred CCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeecc-----------------CCCCcceEEECCCCC
Confidence 34599999999999999888 58899999999887643321 233688999999997
Q ss_pred EE-EEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 241 EL-VAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 241 ~l-~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
.+ ++++.++.|++||+.+++.+..+. +...+.++..
T Consensus 316 ~l~~~~~~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~ 352 (433)
T 3bws_A 316 KIYVSDMCCSKIEVYDLKEKKVQKSIP-VFDKPNTIAL 352 (433)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEE-CSSSEEEEEE
T ss_pred EEEEEecCCCEEEEEECCCCcEEEEec-CCCCCCeEEE
Confidence 55 566889999999999999988887 5566666543
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.70 E-value=3.9e-16 Score=136.00 Aligned_cols=155 Identities=8% Similarity=-0.014 Sum_probs=113.1
Q ss_pred ccCCCCeee-------ccccceEeeeeecC-----CC------CceeeCCCCCeEEEEECCC-CCEEEEEeCCCcEEEEE
Q 023642 92 NYSGRGRFS-------AADCCHMLSRYLPV-----NG------PWPVDQTTSRAYVSQFSAD-GSLFVAGFQASQIRIYD 152 (279)
Q Consensus 92 ~~~~~~~~~-------~~d~~~~~~~~~~~-----~~------~~~l~~h~~~V~~~~~spd-~~~l~s~~~d~~i~iwd 152 (279)
.+++++.+. +.|+.+.+|++... .. ...+.+|...|.+++|+|+ +.+|++++.|++|++||
T Consensus 99 ~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD 178 (434)
T 2oit_A 99 ALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQ 178 (434)
T ss_dssp EECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCEEEEE
T ss_pred EEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeEEEEE
Confidence 456666542 24788899987653 11 1335679999999999997 89999999999999999
Q ss_pred cCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEE
Q 023642 153 VERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFS 232 (279)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 232 (279)
+.++..... ..+|...|.+++|+|+|++|++++.|+.|++||++ ++.......... ....|...|.+
T Consensus 179 ~~~~~~~~~---~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~---------~~~~~~~~v~~ 245 (434)
T 2oit_A 179 VTETVKVCA---TLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPF---------YESDHPVRVLD 245 (434)
T ss_dssp ESSSEEEEE---EECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTT---------CCTTSCEEEEE
T ss_pred cCCCcceee---ccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcc---------cCCCCceeEEE
Confidence 998855432 34677889999999999999999999999999998 443221111000 00114458999
Q ss_pred EEEecCCCEEEEec-CCC------eEEEEECCCC
Q 023642 233 LKFSTDGRELVAGS-SDD------CIYVYDLEAN 259 (279)
Q Consensus 233 ~~~sp~g~~l~t~s-~d~------~i~vwd~~~~ 259 (279)
++|++++.++++.+ .++ .+++|+++..
T Consensus 246 v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 246 VLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred EEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 99999988876432 332 4999999864
No 131
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.66 E-value=1.1e-15 Score=141.11 Aligned_cols=174 Identities=11% Similarity=0.103 Sum_probs=120.2
Q ss_pred CccCCCCee--eccccceEeeeeecCCCCceeeCCCC---CeEEEEECCCCCEEEEEeCC---------CcEEEEEcCCC
Q 023642 91 GNYSGRGRF--SAADCCHMLSRYLPVNGPWPVDQTTS---RAYVSQFSADGSLFVAGFQA---------SQIRIYDVERG 156 (279)
Q Consensus 91 ~~~~~~~~~--~~~d~~~~~~~~~~~~~~~~l~~h~~---~V~~~~~spd~~~l~s~~~d---------~~i~iwd~~~~ 156 (279)
..++++|.+ .+.++.+.+|+.........+..|.. .|.+++|||||++|++++.+ +.|.+||+.++
T Consensus 22 ~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~ 101 (723)
T 1xfd_A 22 AKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHG 101 (723)
T ss_dssp CCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSC
T ss_pred cEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCC
Confidence 345666654 34577888998877766666666665 49999999999999999875 77889999988
Q ss_pred eEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCC----CCccccEEE
Q 023642 157 WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADD----GGYSFGIFS 232 (279)
Q Consensus 157 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~ 232 (279)
+. ..+.....|...+..++|||||+.|++++. +.|++||+.+++...+.... .....+.+..+ ..-...+.+
T Consensus 102 ~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~--~~~~~~~g~~~~v~~ee~~~~~~~ 177 (723)
T 1xfd_A 102 DP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTG--KEGVIYNGLSDWLYEEEILKTHIA 177 (723)
T ss_dssp CC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCC--BTTTEEEEECCHHHHHTTSSSSEE
T ss_pred ce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCC--CCCceECcccceeEEEEeccCcce
Confidence 65 222223345555889999999999999886 79999999988765433211 00001111100 000012378
Q ss_pred EEEecCCCEEEEecCCC----------------------------------eEEEEECCCCeEEEEEeCC
Q 023642 233 LKFSTDGRELVAGSSDD----------------------------------CIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 233 ~~~sp~g~~l~t~s~d~----------------------------------~i~vwd~~~~~~~~~~~~h 268 (279)
++|||||++|++++.|+ .|++||+.+++....+..+
T Consensus 178 ~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~ 247 (723)
T 1xfd_A 178 HWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPP 247 (723)
T ss_dssp EEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCC
T ss_pred EEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCC
Confidence 99999999999887543 7999999988766666654
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.62 E-value=5.4e-14 Score=125.81 Aligned_cols=170 Identities=13% Similarity=0.069 Sum_probs=119.5
Q ss_pred cCCCCee---eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEc--CCCeEEeeeeeccC
Q 023642 93 YSGRGRF---SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDV--ERGWKIQKDILAKS 167 (279)
Q Consensus 93 ~~~~~~~---~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~--~~~~~~~~~~~~~~ 167 (279)
+++.+.+ ...++.+.+|+....+....+..+.. +..++|+|||++|++++.|++|.+||+ .+++.+..+.
T Consensus 145 ~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~---- 219 (543)
T 1nir_A 145 LDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK---- 219 (543)
T ss_dssp CCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE----
T ss_pred cCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe----
Confidence 4444443 34567788887655544455653333 899999999999999999999999999 7777665432
Q ss_pred CCcceEEEEECC----CCCEEEEEe-CCCeEEEEECCCCceeeeecccc------------ccceeEEeeCCC-------
Q 023642 168 LRWTVTDTSLSP----DQRHLVYAS-MSPIVHIVDVGSGTMESLANVTE------------IHDGLDFSAADD------- 223 (279)
Q Consensus 168 ~~~~v~~~~~sp----~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~------------~~~~~~~~~~~~------- 223 (279)
+...+..++|+| ||++|++++ .+++|.+||..+++......... ....+.+++.+.
T Consensus 220 ~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~ 299 (543)
T 1nir_A 220 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVK 299 (543)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEEC
Confidence 334589999999 999999888 58999999999887654433210 011122222111
Q ss_pred -----------C---------CccccEEEEEEecCCCEEEEe-cCCCeEEEEECCCCeEEEEEeC
Q 023642 224 -----------G---------GYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 224 -----------~---------~~~~~v~~~~~sp~g~~l~t~-s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
. .+...+..+.|+|+|++|+++ ..+++|.+||+.+++++.++..
T Consensus 300 ~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~~ 364 (543)
T 1nir_A 300 ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVDV 364 (543)
T ss_dssp TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeecc
Confidence 0 012245578999999987655 4688999999999999999885
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=1e-13 Score=113.05 Aligned_cols=154 Identities=12% Similarity=0.096 Sum_probs=109.4
Q ss_pred ccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-CeEEeeeeeccCC-CcceEEEEEC
Q 023642 101 AADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER-GWKIQKDILAKSL-RWTVTDTSLS 178 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~-~~~v~~~~~s 178 (279)
+.+..+.+|++.... ...+..|...|.+++|+|++++|++++ ++.|++||+.+ ++.... ...+ ...+.+++|+
T Consensus 19 ~~~~~i~~~d~~~~~-~~~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~s 93 (297)
T 2ojh_A 19 SMRSSIEIFNIRTRK-MRVVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKV---DTGFATICNNDHGIS 93 (297)
T ss_dssp CCCEEEEEEETTTTE-EEEEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEEC---CCTTCCCBCSCCEEC
T ss_pred CcceeEEEEeCCCCc-eeeeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEe---ccccccccccceEEC
Confidence 356677777764332 334677899999999999999999987 78999999998 755432 2233 3678999999
Q ss_pred CCCCEEEEEeC--C--CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEE-EecCCCeEEE
Q 023642 179 PDQRHLVYASM--S--PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYV 253 (279)
Q Consensus 179 p~~~~l~~~~~--d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~-t~s~d~~i~v 253 (279)
|++++|++++. + ..|.+|+..++....+. +...+..++|+|++++|+ +++.++.+.+
T Consensus 94 pdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~------------------~~~~~~~~~~spdg~~l~~~~~~~~~~~l 155 (297)
T 2ojh_A 94 PDGALYAISDKVEFGKSAIYLLPSTGGTPRLMT------------------KNLPSYWHGWSPDGKSFTYCGIRDQVFDI 155 (297)
T ss_dssp TTSSEEEEEECTTTSSCEEEEEETTCCCCEECC------------------SSSSEEEEEECTTSSEEEEEEEETTEEEE
T ss_pred CCCCEEEEEEeCCCCcceEEEEECCCCceEEee------------------cCCCccceEECCCCCEEEEEECCCCceEE
Confidence 99999999983 3 44555565655532221 112478899999999887 6778898899
Q ss_pred EECCC-CeEEEEEeCCCcceeEEEe
Q 023642 254 YDLEA-NKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 254 wd~~~-~~~~~~~~~h~~~v~~v~~ 277 (279)
|++.. +.....+..|...+.++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (297)
T 2ojh_A 156 YSMDIDSGVETRLTHGEGRNDGPDY 180 (297)
T ss_dssp EEEETTTCCEEECCCSSSCEEEEEE
T ss_pred EEEECCCCcceEcccCCCccccceE
Confidence 98532 3344566667777776654
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.57 E-value=1.7e-13 Score=111.67 Aligned_cols=166 Identities=17% Similarity=0.185 Sum_probs=112.0
Q ss_pred CccCCCCee---ec--cccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEE-EEeCCCcEEEEEcC--CCeEEeee
Q 023642 91 GNYSGRGRF---SA--ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFV-AGFQASQIRIYDVE--RGWKIQKD 162 (279)
Q Consensus 91 ~~~~~~~~~---~~--~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~-s~~~d~~i~iwd~~--~~~~~~~~ 162 (279)
..+++++.+ .. .+....+|.+...........+...+..++|+||+++|+ +++.++.++||+++ ++.. .
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~-- 166 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-T-- 166 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-E--
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-e--
Confidence 345666654 12 223556666654333333333334599999999999887 78889999999864 4432 2
Q ss_pred eeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEECC-CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCC
Q 023642 163 ILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVG-SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR 240 (279)
Q Consensus 163 ~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 240 (279)
....+...+.+++|+|++++|+.++ .++.+++|++. .+....... .|...+..++|+|+|+
T Consensus 167 -~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~----------------~~~~~~~~~~~s~dg~ 229 (297)
T 2ojh_A 167 -RLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSSVERIT----------------DSAYGDWFPHPSPSGD 229 (297)
T ss_dssp -ECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCEEECC----------------CCSEEEEEEEECTTSS
T ss_pred -EcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCCcEEEe----------------cCCcccCCeEECCCCC
Confidence 2346667899999999999888766 58889999875 222211111 1334788999999999
Q ss_pred EEEEecCC-----------CeEEEEECCCCeE--EEEEeCCCcceeEEE
Q 023642 241 ELVAGSSD-----------DCIYVYDLEANKL--SLRILAHTVNIALWI 276 (279)
Q Consensus 241 ~l~t~s~d-----------~~i~vwd~~~~~~--~~~~~~h~~~v~~v~ 276 (279)
+|++++.+ ..|++||+.+++. +..+.+|...+.++.
T Consensus 230 ~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 278 (297)
T 2ojh_A 230 KVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPN 278 (297)
T ss_dssp EEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCC
T ss_pred EEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccce
Confidence 99887765 5699999988754 455557777666543
No 135
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.56 E-value=4.2e-14 Score=130.86 Aligned_cols=141 Identities=14% Similarity=0.090 Sum_probs=98.0
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCC---eEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 023642 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERG---WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (279)
Q Consensus 126 ~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~ 202 (279)
.|.+++|||||++|++++. +.|++||+.++ .... +..+...+..++|+|||++|++++. +.|++||+.+++
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~----l~~~~~~~~~~~~SPDG~~la~~~~-~~i~~~d~~~g~ 183 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQ----LTHGEGFATDAKLSPKGGFVSFIRG-RNLWVIDLASGR 183 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCCB----CCCSSSCEEEEEECTTSSEEEEEET-TEEEEEETTTTE
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEEE----cccCCcccccccCCCCCCEEEEEeC-CcEEEEecCCCC
Confidence 3789999999999999987 89999999987 4322 3466678999999999999999874 589999999887
Q ss_pred eeeeeccccccceeEEeeCCC---CCccccEEEEEEecCCCEEEEecCCC------------------------------
Q 023642 203 MESLANVTEIHDGLDFSAADD---GGYSFGIFSLKFSTDGRELVAGSSDD------------------------------ 249 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~g~~l~t~s~d~------------------------------ 249 (279)
...+...... . .+.+..+ ......+..++|||||++|++++.|+
T Consensus 184 ~~~~~~~~~~--~-~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~ 260 (741)
T 2ecf_A 184 QMQLTADGST--T-IGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDAN 260 (741)
T ss_dssp EEECCCCCCS--S-EEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCC
T ss_pred EEEeccCCcc--c-eeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCC
Confidence 6543221100 0 0000000 00001247799999999999887665
Q ss_pred ---eEEEEECCC-CeEEEEEe--CCCcceeEE
Q 023642 250 ---CIYVYDLEA-NKLSLRIL--AHTVNIALW 275 (279)
Q Consensus 250 ---~i~vwd~~~-~~~~~~~~--~h~~~v~~v 275 (279)
.|++||+.+ ++...... .|...+.++
T Consensus 261 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~ 292 (741)
T 2ecf_A 261 VQVKLGVISPAEQAQTQWIDLGKEQDIYLARV 292 (741)
T ss_dssp CEEEEEEECSSTTCCCEEECCCSCSSEEEEEE
T ss_pred CeeEEEEEECCCCCceEEecCCCCcceEEEEE
Confidence 899999998 77654433 355555444
No 136
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.56 E-value=4.3e-15 Score=137.09 Aligned_cols=150 Identities=15% Similarity=0.103 Sum_probs=98.0
Q ss_pred ccCCCCee--eccccceEeeeeecCCCCceeeCCCC---CeEEEEECCCCCEEEEEeC---------CCcEEEEEcCCCe
Q 023642 92 NYSGRGRF--SAADCCHMLSRYLPVNGPWPVDQTTS---RAYVSQFSADGSLFVAGFQ---------ASQIRIYDVERGW 157 (279)
Q Consensus 92 ~~~~~~~~--~~~d~~~~~~~~~~~~~~~~l~~h~~---~V~~~~~spd~~~l~s~~~---------d~~i~iwd~~~~~ 157 (279)
.+++++.+ .+.++.+.+|+.........+..|.. .+.+++|||||++|++++. ++.|++||+.+++
T Consensus 22 ~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~ 101 (719)
T 1z68_A 22 NWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGE 101 (719)
T ss_dssp EESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTE
T ss_pred EECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCc
Confidence 34555554 33567788887765544434444433 4899999999999998876 7899999999986
Q ss_pred EEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCC----ccccEEEE
Q 023642 158 KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGG----YSFGIFSL 233 (279)
Q Consensus 158 ~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~v~~~ 233 (279)
.+.. ......+..++|||||+.|+++. ++.|++||+.+++...+... ......+.++.+-- ......++
T Consensus 102 ~~~~----~~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~--~~~~~v~~g~~~~v~~ee~~~~~~~~ 174 (719)
T 1z68_A 102 FVRG----NELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFN--GRENKIFNGIPDWVYEEEMLATKYAL 174 (719)
T ss_dssp ECCS----SCCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCC--CBTTTEEESSCCHHHHHHTTCSSCCE
T ss_pred cccc----eecCcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecC--CCcCCeEcccccceeeeecccCcccE
Confidence 5211 11123588999999999999886 67999999998876433211 11111111111100 00112589
Q ss_pred EEecCCCEEEEecCC
Q 023642 234 KFSTDGRELVAGSSD 248 (279)
Q Consensus 234 ~~sp~g~~l~t~s~d 248 (279)
+|||||++|++++.|
T Consensus 175 ~wSPDG~~la~~~~d 189 (719)
T 1z68_A 175 WWSPNGKFLAYAEFN 189 (719)
T ss_dssp EECTTSSEEEEEEEE
T ss_pred EECCCCCEEEEEEEC
Confidence 999999999988754
No 137
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.55 E-value=9.6e-13 Score=111.34 Aligned_cols=172 Identities=14% Similarity=0.054 Sum_probs=113.6
Q ss_pred CccCCCCee--e--ccccceEeeeeecCCC----C---------ceeeCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEE
Q 023642 91 GNYSGRGRF--S--AADCCHMLSRYLPVNG----P---------WPVDQTTSRAYVSQFSADGSLFVAGF-QASQIRIYD 152 (279)
Q Consensus 91 ~~~~~~~~~--~--~~d~~~~~~~~~~~~~----~---------~~l~~h~~~V~~~~~spd~~~l~s~~-~d~~i~iwd 152 (279)
..++++|++ . ..++.+.+|++..... . .....+......++|+|||+++++++ .++.|.+||
T Consensus 160 ~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~~ 239 (361)
T 3scy_A 160 VRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTVIAFR 239 (361)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeEEEEE
Confidence 457788763 2 2356777887765443 1 11234456688999999999887776 689999999
Q ss_pred cCCCeEE--eeeeeccCCCcceEEEEECCCCCEEEEEeCC--CeEEEEECC--CCceeeeeccccccceeEEeeCCCCCc
Q 023642 153 VERGWKI--QKDILAKSLRWTVTDTSLSPDQRHLVYASMS--PIVHIVDVG--SGTMESLANVTEIHDGLDFSAADDGGY 226 (279)
Q Consensus 153 ~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--~~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (279)
+.++... ........+......++|+|||++|+++..+ +.|.+|++. ++........ .. +
T Consensus 240 ~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~---------~~-g---- 305 (361)
T 3scy_A 240 YADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ---------LT-G---- 305 (361)
T ss_dssp EETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE---------EC-S----
T ss_pred ecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe---------cC-C----
Confidence 9877432 2222223333457899999999998776654 899999985 4553322211 11 1
Q ss_pred cccEEEEEEecCCCEEEEec-CCCeEEEE--ECCCCeEEEEEe-CCCcceeEEEe
Q 023642 227 SFGIFSLKFSTDGRELVAGS-SDDCIYVY--DLEANKLSLRIL-AHTVNIALWIT 277 (279)
Q Consensus 227 ~~~v~~~~~sp~g~~l~t~s-~d~~i~vw--d~~~~~~~~~~~-~h~~~v~~v~~ 277 (279)
..+..++|+|||++|++++ .++.|.+| |..+++...... .+...+.|+..
T Consensus 306 -~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~ 359 (361)
T 3scy_A 306 -IHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKF 359 (361)
T ss_dssp -SCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEE
T ss_pred -CCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEE
Confidence 1567899999999888877 57889996 555676654432 24455666653
No 138
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.53 E-value=2e-13 Score=125.66 Aligned_cols=171 Identities=16% Similarity=0.122 Sum_probs=121.0
Q ss_pred CccCCCCee--eccccceEeeeeec-----CCCCceeeCCCCC--------------eEEEEECCCCCEEEEEe------
Q 023642 91 GNYSGRGRF--SAADCCHMLSRYLP-----VNGPWPVDQTTSR--------------AYVSQFSADGSLFVAGF------ 143 (279)
Q Consensus 91 ~~~~~~~~~--~~~d~~~~~~~~~~-----~~~~~~l~~h~~~--------------V~~~~~spd~~~l~s~~------ 143 (279)
..++++|+. ...+..+.+|++.. .........+... +.+++|||||++|++++
T Consensus 126 ~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~ 205 (706)
T 2z3z_A 126 LDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMV 205 (706)
T ss_dssp CEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTS
T ss_pred CcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCC
Confidence 356787764 34677788888765 3333323333332 48899999999999987
Q ss_pred ---------------------------CCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCC-----
Q 023642 144 ---------------------------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP----- 191 (279)
Q Consensus 144 ---------------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----- 191 (279)
.+..|++||+.+++.... .....|...+..++|+|||++|++++.++
T Consensus 206 ~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~ 284 (706)
T 2z3z_A 206 KPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYL-QTGEPKEKFLTNLSWSPDENILYVAEVNRAQNEC 284 (706)
T ss_dssp CCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEEC-CCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEE
T ss_pred ceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEee-ccCCCCceeEeeEEEECCCCEEEEEEeCCCCCee
Confidence 446899999998865432 12235667899999999999999888775
Q ss_pred eEEEEECCCC-ceeeeeccccccceeEEeeCCCCCccccEEEEEEec--CCCEEEEecCCCeEEEEECC-CCeEEEEEeC
Q 023642 192 IVHIVDVGSG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST--DGRELVAGSSDDCIYVYDLE-ANKLSLRILA 267 (279)
Q Consensus 192 ~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--~g~~l~t~s~d~~i~vwd~~-~~~~~~~~~~ 267 (279)
.|++||+.++ ....+... ... .....+..++|+| ||+++++++.|+.+++|++. +++.+..+..
T Consensus 285 ~v~~~d~~~g~~~~~~~~~----------~~~--~~~~~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~ 352 (706)
T 2z3z_A 285 KVNAYDAETGRFVRTLFVE----------TDK--HYVEPLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTK 352 (706)
T ss_dssp EEEEEETTTCCEEEEEEEE----------ECS--SCCCCCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCC
T ss_pred EEEEEECCCCceeeEEEEc----------cCC--CeECccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCC
Confidence 8999999998 43322110 000 0111245789999 99999999999989999876 6778888888
Q ss_pred CCcceeE
Q 023642 268 HTVNIAL 274 (279)
Q Consensus 268 h~~~v~~ 274 (279)
|...+.+
T Consensus 353 ~~~~v~~ 359 (706)
T 2z3z_A 353 GEWEVTN 359 (706)
T ss_dssp SSSCEEE
T ss_pred CCeEEEe
Confidence 8777765
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.52 E-value=2e-12 Score=107.94 Aligned_cols=174 Identities=13% Similarity=0.137 Sum_probs=110.2
Q ss_pred ccCCCCee---ec-cccceEeeeeec---CCCCceeeCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCC-CeEEeee
Q 023642 92 NYSGRGRF---SA-ADCCHMLSRYLP---VNGPWPVDQTTSRAYVSQFSADGSLFVAGF-QASQIRIYDVER-GWKIQKD 162 (279)
Q Consensus 92 ~~~~~~~~---~~-~d~~~~~~~~~~---~~~~~~l~~h~~~V~~~~~spd~~~l~s~~-~d~~i~iwd~~~-~~~~~~~ 162 (279)
.+++++.+ .+ .++.+.+|++.. ......+ .....+.+++|+|+++++++++ .++.|.+||+.+ ++.....
T Consensus 90 ~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 168 (343)
T 1ri6_A 90 STDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVV-EGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQD 168 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEE-CCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEE
T ss_pred EEcCCCCEEEEEecCCCeEEEEECCCCccccccccc-cCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeec
Confidence 35666653 22 356688888741 1111222 3345689999999999888877 889999999987 5432211
Q ss_pred --eeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCC--CceeeeeccccccceeEEeeCCCCCccccEEEEEEec
Q 023642 163 --ILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGS--GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST 237 (279)
Q Consensus 163 --~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 237 (279)
.........+..++|+|+++++++++ .++.+.+||+.. +.............+ ......+..++|+|
T Consensus 169 ~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~--------~~~~~~~~~i~~s~ 240 (343)
T 1ri6_A 169 PAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPEN--------FSDTRWAADIHITP 240 (343)
T ss_dssp EEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTT--------CCSCCCEEEEEECT
T ss_pred ccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCcc--------ccccCCccceEECC
Confidence 11122334688999999999876555 889999999954 433211111100000 00123677899999
Q ss_pred CCCEEE-EecCCCeEEEEECC----CCeEEEEEeCCCcceeEE
Q 023642 238 DGRELV-AGSSDDCIYVYDLE----ANKLSLRILAHTVNIALW 275 (279)
Q Consensus 238 ~g~~l~-t~s~d~~i~vwd~~----~~~~~~~~~~h~~~v~~v 275 (279)
+|++|+ +...++.|.+||+. +.+.+..+..+.. +..+
T Consensus 241 dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~ 282 (343)
T 1ri6_A 241 DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGF 282 (343)
T ss_dssp TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCE
T ss_pred CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceE
Confidence 999877 45578999999998 3456666665444 4443
No 140
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.52 E-value=3.8e-13 Score=124.40 Aligned_cols=126 Identities=17% Similarity=0.111 Sum_probs=98.7
Q ss_pred CCCeEEEEECCCCCEEEEEeC-CC-----cEEEEEcCCCeEEeeeeeccCCC----------------------cceEEE
Q 023642 124 TSRAYVSQFSADGSLFVAGFQ-AS-----QIRIYDVERGWKIQKDILAKSLR----------------------WTVTDT 175 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~-d~-----~i~iwd~~~~~~~~~~~~~~~~~----------------------~~v~~~ 175 (279)
...+.+++|||||++|++++. |+ .|++||+.+++..... ....+. ..+.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLV-DSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEE-CGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEcc-chhhcccccccccchhhhhhhhhhhccccCccee
Confidence 457899999999999999998 88 8999999998654432 122222 347899
Q ss_pred EECCCCCEEEEEeCCCeEEEEECCCC---ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEE
Q 023642 176 SLSPDQRHLVYASMSPIVHIVDVGSG---TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIY 252 (279)
Q Consensus 176 ~~sp~~~~l~~~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~ 252 (279)
+|+|||++|++++. +.|++||+.++ ....+.. |...+..++|||||++|++++ ++.|+
T Consensus 115 ~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~-----------------~~~~~~~~~~SPDG~~la~~~-~~~i~ 175 (741)
T 2ecf_A 115 QWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTH-----------------GEGFATDAKLSPKGGFVSFIR-GRNLW 175 (741)
T ss_dssp EECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCC-----------------SSSCEEEEEECTTSSEEEEEE-TTEEE
T ss_pred EECCCCCEEEEEeC-CcEEEEECCCCCcceEEEccc-----------------CCcccccccCCCCCCEEEEEe-CCcEE
Confidence 99999999999887 89999999987 4432211 334799999999999999887 46899
Q ss_pred EEECCCCeEEEEEeCCC
Q 023642 253 VYDLEANKLSLRILAHT 269 (279)
Q Consensus 253 vwd~~~~~~~~~~~~h~ 269 (279)
+||+.+++.......+.
T Consensus 176 ~~d~~~g~~~~~~~~~~ 192 (741)
T 2ecf_A 176 VIDLASGRQMQLTADGS 192 (741)
T ss_dssp EEETTTTEEEECCCCCC
T ss_pred EEecCCCCEEEeccCCc
Confidence 99999988776555443
No 141
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.51 E-value=9.9e-13 Score=109.77 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=101.8
Q ss_pred ccccceEeeeeecCCCC--ceeeCCCCCeEEEEECCCCCEEEEEeCC-CcEEEEEcC--CCeEEeeeeeccCCCcceEEE
Q 023642 101 AADCCHMLSRYLPVNGP--WPVDQTTSRAYVSQFSADGSLFVAGFQA-SQIRIYDVE--RGWKIQKDILAKSLRWTVTDT 175 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~~~--~~l~~h~~~V~~~~~spd~~~l~s~~~d-~~i~iwd~~--~~~~~~~~~~~~~~~~~v~~~ 175 (279)
+.++.+.+|++...... .....|...+.+++|+|++++|++++.+ +.|.+|+++ ++..... .....+. .+..+
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~-~~~~~~~-~~~~~ 89 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFA-AESALPG-SLTHI 89 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEE-EEEECSS-CCSEE
T ss_pred CCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeec-cccccCC-CCcEE
Confidence 45778888887542221 2234577889999999999999888876 899999998 5543211 1122222 68999
Q ss_pred EECCCCCEEEEEeC-CCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec-CCCeEEE
Q 023642 176 SLSPDQRHLVYASM-SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYV 253 (279)
Q Consensus 176 ~~sp~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s-~d~~i~v 253 (279)
+|+|++++|++++. ++.|.+||+..+........ +. ....+.+++|+|+|+++++++ .++.|++
T Consensus 90 ~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~--------~~------~~~~~~~~~~s~dg~~l~~~~~~~~~v~~ 155 (343)
T 1ri6_A 90 STDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDV--------VE------GLDGCHSANISPDNRTLWVPALKQDRICL 155 (343)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEE--------EC------CCTTBCCCEECTTSSEEEEEEGGGTEEEE
T ss_pred EEcCCCCEEEEEecCCCeEEEEECCCCcccccccc--------cc------CCCCceEEEECCCCCEEEEecCCCCEEEE
Confidence 99999998877664 88999999953332111111 00 112578899999999888776 7899999
Q ss_pred EECCC-CeE
Q 023642 254 YDLEA-NKL 261 (279)
Q Consensus 254 wd~~~-~~~ 261 (279)
||+.+ ++.
T Consensus 156 ~d~~~~~~~ 164 (343)
T 1ri6_A 156 FTVSDDGHL 164 (343)
T ss_dssp EEECTTSCE
T ss_pred EEecCCCce
Confidence 99987 654
No 142
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.51 E-value=2.4e-13 Score=130.56 Aligned_cols=162 Identities=16% Similarity=0.100 Sum_probs=121.6
Q ss_pred cC-CCCee--eccccceEeeeeecCCCCceeeCCCC-CeEEEEECCCCCEEEEEeCCCcEE-EEEcCCCeEEeeeeeccC
Q 023642 93 YS-GRGRF--SAADCCHMLSRYLPVNGPWPVDQTTS-RAYVSQFSADGSLFVAGFQASQIR-IYDVERGWKIQKDILAKS 167 (279)
Q Consensus 93 ~~-~~~~~--~~~d~~~~~~~~~~~~~~~~l~~h~~-~V~~~~~spd~~~l~s~~~d~~i~-iwd~~~~~~~~~~~~~~~ 167 (279)
++ ++|.. ...+..+.+|+.... ....+..|.. .+..++|+ ||+.|++++.+..+. +||+.++.... +..
T Consensus 303 ~S~pdG~~la~~~~~~i~~~~~~~~-~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~~----l~~ 376 (1045)
T 1k32_A 303 FSPLDGDLIAFVSRGQAFIQDVSGT-YVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAEK----FEE 376 (1045)
T ss_dssp EEECGGGCEEEEETTEEEEECTTSS-BEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEEE----CCC
T ss_pred ecCCCCCEEEEEEcCEEEEEcCCCC-ceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCceE----ecC
Confidence 45 66543 222444555544322 2233567777 89999999 999999999888898 99998875432 236
Q ss_pred CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC
Q 023642 168 LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247 (279)
Q Consensus 168 ~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~ 247 (279)
|...+..++|+|||++|++++.++.+++||+.+++...+... |...+.+++|+|||++|++++.
T Consensus 377 ~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~----------------~~~~v~~~~~SpDG~~la~~~~ 440 (1045)
T 1k32_A 377 NLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERS----------------REAMITDFTISDNSRFIAYGFP 440 (1045)
T ss_dssp CCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC----------------SSSCCCCEEECTTSCEEEEEEE
T ss_pred CccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccC----------------CCCCccceEECCCCCeEEEEec
Confidence 667899999999999999999999999999999886543311 4457889999999999988776
Q ss_pred CC----------eEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 248 DD----------CIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 248 d~----------~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
++ .|++||+.+++ +..+..|...+.++..
T Consensus 441 ~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~ 479 (1045)
T 1k32_A 441 LKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAF 479 (1045)
T ss_dssp ECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEE
T ss_pred CccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceE
Confidence 43 89999999887 6777778777666543
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.50 E-value=2.8e-12 Score=107.60 Aligned_cols=151 Identities=10% Similarity=-0.008 Sum_probs=110.3
Q ss_pred ccceEeeeeecCCCCceeeCCCC---------CeEEEEECCCCCEEEEEe--CCCcEEEEEcCCCeEEeeeeeccCCCcc
Q 023642 103 DCCHMLSRYLPVNGPWPVDQTTS---------RAYVSQFSADGSLFVAGF--QASQIRIYDVERGWKIQKDILAKSLRWT 171 (279)
Q Consensus 103 d~~~~~~~~~~~~~~~~l~~h~~---------~V~~~~~spd~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~ 171 (279)
+..+.+|+.........+..+.. .+.+++|+|+++++++++ .++.|.+||+.+++..... ..+...
T Consensus 110 ~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~ 186 (353)
T 3vgz_A 110 NSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI---QNTGKM 186 (353)
T ss_dssp TTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE---CCCCTT
T ss_pred CCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe---cCCCCc
Confidence 45666666544433334444332 278999999999887765 4789999999998766542 223445
Q ss_pred eEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC-CCe
Q 023642 172 VTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDC 250 (279)
Q Consensus 172 v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~-d~~ 250 (279)
+..++|+|++++|++++.++.+.+||+.+++........ ..++...+..++|+|+|++++.++. ++.
T Consensus 187 ~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~------------~~~~~~~~~~~~~s~dg~~l~~~~~~~~~ 254 (353)
T 3vgz_A 187 STGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLL------------DDGKEHFFINISLDTARQRAFITDSKAAE 254 (353)
T ss_dssp CCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECC------------CSSSCCCEEEEEEETTTTEEEEEESSSSE
T ss_pred cceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcC------------CCCCCcccceEEECCCCCEEEEEeCCCCE
Confidence 788999999999999999999999999998765432221 0113346888999999997776654 589
Q ss_pred EEEEECCCCeEEEEEeCC
Q 023642 251 IYVYDLEANKLSLRILAH 268 (279)
Q Consensus 251 i~vwd~~~~~~~~~~~~h 268 (279)
|.+||+.+++.+..+...
T Consensus 255 v~~~d~~~~~~~~~~~~~ 272 (353)
T 3vgz_A 255 VLVVDTRNGNILAKVAAP 272 (353)
T ss_dssp EEEEETTTCCEEEEEECS
T ss_pred EEEEECCCCcEEEEEEcC
Confidence 999999999988888753
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.50 E-value=2.3e-12 Score=107.39 Aligned_cols=164 Identities=10% Similarity=0.008 Sum_probs=111.1
Q ss_pred ccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcCCCeE-EeeeeeccCCCcceEEEEEC
Q 023642 101 AADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWK-IQKDILAKSLRWTVTDTSLS 178 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~-d~~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~s 178 (279)
+.++.+.+|+.........+..+...+ .++|+|+++++++++. ++.|.+||+.+++. ... ...+..+..+++|+
T Consensus 17 ~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~s 92 (331)
T 3u4y_A 17 QHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVA---IQEGQSSMADVDIT 92 (331)
T ss_dssp GGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEE---EEECSSCCCCEEEC
T ss_pred cCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEe---cccCCCCccceEEC
Confidence 456677788765554444556666667 9999999997766655 88999999998865 332 23344445559999
Q ss_pred CCCCEEEEEeCCC---eEEEEECCCCceeeeeccccccceeEEeeCCC---------CC---------------------
Q 023642 179 PDQRHLVYASMSP---IVHIVDVGSGTMESLANVTEIHDGLDFSAADD---------GG--------------------- 225 (279)
Q Consensus 179 p~~~~l~~~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~--------------------- 225 (279)
|+|++|+++..++ .|.+||+.+++.............+.|.+++. ..
T Consensus 93 ~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~ 172 (331)
T 3u4y_A 93 PDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI 172 (331)
T ss_dssp TTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE
T ss_pred CCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc
Confidence 9999999555553 89999999887654433322222333333322 00
Q ss_pred -ccccEEEEEEecCCCEEE-EecCCCeEEEEECCCCeE---EEEEeCC
Q 023642 226 -YSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLEANKL---SLRILAH 268 (279)
Q Consensus 226 -~~~~v~~~~~sp~g~~l~-t~s~d~~i~vwd~~~~~~---~~~~~~h 268 (279)
....+..++|+|+|++++ ++..++.|++||+.+++. +..+..+
T Consensus 173 ~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~ 220 (331)
T 3u4y_A 173 SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTN 220 (331)
T ss_dssp CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECS
T ss_pred cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCC
Confidence 013457889999998655 445688999999998887 7777754
No 145
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.50 E-value=8.9e-13 Score=109.77 Aligned_cols=145 Identities=14% Similarity=0.140 Sum_probs=104.9
Q ss_pred ccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc----------------
Q 023642 103 DCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK---------------- 166 (279)
Q Consensus 103 d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---------------- 166 (279)
+..+.+|+.........+.. ...+..++|+||+++|+++ ++.|.+||+.+++.........
T Consensus 114 ~~~i~v~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~ 190 (337)
T 1pby_B 114 PTRVALYDAETLSRRKAFEA-PRQITMLAWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWN 190 (337)
T ss_dssp CCEEEEEETTTTEEEEEEEC-CSSCCCEEECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCC
T ss_pred CceEEEEECCCCcEEEEEeC-CCCcceeEECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEee
Confidence 46677776543322223333 4567889999999988887 6889999998886543221100
Q ss_pred -----------------------------------------------CCCcceEEEEECCCCCEEEEEeCCCeEEEEECC
Q 023642 167 -----------------------------------------------SLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (279)
Q Consensus 167 -----------------------------------------------~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~ 199 (279)
.+...+.+++|+||+++++++ ++.|.+||+.
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~ 268 (337)
T 1pby_B 191 QHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLE 268 (337)
T ss_dssp CCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETT
T ss_pred eccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECC
Confidence 111234568999999999888 6899999999
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCC
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT 269 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~ 269 (279)
+++....... ...+.+++|+|+|++|++++.++.|++||+.+++.+..++.+.
T Consensus 269 ~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 269 KNASIKRVPL-----------------PHSYYSVNVSTDGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp TTEEEEEEEC-----------------SSCCCEEEECTTSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred CCcCcceecC-----------------CCceeeEEECCCCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 8876433221 1256789999999999988889999999999999999998654
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.50 E-value=2.1e-12 Score=108.38 Aligned_cols=154 Identities=10% Similarity=0.069 Sum_probs=112.2
Q ss_pred ccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeec-cCCCcceEEEEECCCC
Q 023642 103 DCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA-KSLRWTVTDTSLSPDQ 181 (279)
Q Consensus 103 d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~ 181 (279)
+..+.+|+.........+..+...+..++|+|++++|++++.++.|.+||+.+++........ .++...+..++|+|++
T Consensus 163 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 242 (353)
T 3vgz_A 163 ESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTAR 242 (353)
T ss_dssp SCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTT
T ss_pred CceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCC
Confidence 455666665433333344446666889999999999999999999999999999776553321 1245568899999999
Q ss_pred CEEEEEeC-CCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEe-cCCCeEEEEECCCC
Q 023642 182 RHLVYASM-SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEAN 259 (279)
Q Consensus 182 ~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~-s~d~~i~vwd~~~~ 259 (279)
++++.++. ++.|.+||..+++........ ....++|+|+|++++.+ ..++.|.+||+.++
T Consensus 243 ~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~------------------~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~ 304 (353)
T 3vgz_A 243 QRAFITDSKAAEVLVVDTRNGNILAKVAAP------------------ESLAVLFNPARNEAYVTHRQAGKVSVIDAKSY 304 (353)
T ss_dssp TEEEEEESSSSEEEEEETTTCCEEEEEECS------------------SCCCEEEETTTTEEEEEETTTTEEEEEETTTT
T ss_pred CEEEEEeCCCCEEEEEECCCCcEEEEEEcC------------------CCceEEECCCCCEEEEEECCCCeEEEEECCCC
Confidence 98776664 589999999988864433210 12468999999966554 46899999999999
Q ss_pred eEEEEEeCCCcceeEE
Q 023642 260 KLSLRILAHTVNIALW 275 (279)
Q Consensus 260 ~~~~~~~~h~~~v~~v 275 (279)
+.+..+..+. .+.++
T Consensus 305 ~~~~~~~~~~-~~~~~ 319 (353)
T 3vgz_A 305 KVVKTFDTPT-HPNSL 319 (353)
T ss_dssp EEEEEEECCS-EEEEE
T ss_pred eEEEEEecCC-CCCeE
Confidence 9998887544 33443
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.50 E-value=1.3e-13 Score=124.20 Aligned_cols=136 Identities=14% Similarity=0.007 Sum_probs=101.7
Q ss_pred cccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCC----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEE
Q 023642 102 ADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQA----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSL 177 (279)
Q Consensus 102 ~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 177 (279)
.++...+|++..... ..+..+.. .+++|||||++|++++.+ ..|++||+.+++... +..|...+..++|
T Consensus 130 ~~~~~~l~d~~~g~~-~~l~~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~~~----l~~~~~~~~~~~~ 202 (582)
T 3o4h_A 130 TEDRVALYALDGGGL-RELARLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGLRV----FDSGEGSFSSASI 202 (582)
T ss_dssp CSSCEEEEEEETTEE-EEEEEESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCCEE----ECCSSCEEEEEEE
T ss_pred CCCCceEEEccCCcE-EEeecCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCceE----eecCCCccccceE
Confidence 444555776654432 23333333 889999999999988877 789999999886432 3577778999999
Q ss_pred CCCCCEEEEEeCCC--eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEE--------EecCCCEEEEecC
Q 023642 178 SPDQRHLVYASMSP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLK--------FSTDGRELVAGSS 247 (279)
Q Consensus 178 sp~~~~l~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~--------~sp~g~~l~t~s~ 247 (279)
+|||+.|+++..++ .|++||+.+++.. .... |...+..++ |+|||.++++++.
T Consensus 203 SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~----------------~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 265 (582)
T 3o4h_A 203 SPGMKVTAGLETAREARLVTVDPRDGSVE-DLEL----------------PSKDFSSYRPTAITWLGYLPDGRLAVVARR 265 (582)
T ss_dssp CTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCC----------------SCSHHHHHCCSEEEEEEECTTSCEEEEEEE
T ss_pred CCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccC----------------CCcChhhhhhccccceeEcCCCcEEEEEEc
Confidence 99999999888888 8999999988765 2211 222333344 9999988889999
Q ss_pred CCeEEEEECCCCeEEE
Q 023642 248 DDCIYVYDLEANKLSL 263 (279)
Q Consensus 248 d~~i~vwd~~~~~~~~ 263 (279)
++++++|++ |+.+.
T Consensus 266 ~g~~~l~~~--g~~~~ 279 (582)
T 3o4h_A 266 EGRSAVFID--GERVE 279 (582)
T ss_dssp TTEEEEEET--TEEEC
T ss_pred CCcEEEEEE--CCeec
Confidence 999999999 66554
No 148
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.49 E-value=3.3e-13 Score=124.23 Aligned_cols=155 Identities=16% Similarity=0.066 Sum_probs=110.4
Q ss_pred ccCCCCee-eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC-----CeEEeeeeec
Q 023642 92 NYSGRGRF-SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVER-----GWKIQKDILA 165 (279)
Q Consensus 92 ~~~~~~~~-~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~~~ 165 (279)
.+++++.+ .+.++.+.+|++... ....+..+...+.+++|||||++|+++ .|+.|++||+.+ ++.....
T Consensus 88 ~~spd~~~~~~~~~~i~~~d~~~~-~~~~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~--- 162 (706)
T 2z3z_A 88 LDAGRGLVVLFTQGGLVGFDMLAR-KVTYLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVT--- 162 (706)
T ss_dssp EETTTTEEEEEETTEEEEEETTTT-EEEEEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESC---
T ss_pred EECCCCeEEEEECCEEEEEECCCC-ceEEccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEec---
Confidence 35555333 345677777876432 233466777889999999999999985 679999999998 7544321
Q ss_pred cCCCc--------------ceEEEEECCCCCEEEEEe---------------------------------CCCeEEEEEC
Q 023642 166 KSLRW--------------TVTDTSLSPDQRHLVYAS---------------------------------MSPIVHIVDV 198 (279)
Q Consensus 166 ~~~~~--------------~v~~~~~sp~~~~l~~~~---------------------------------~d~~i~i~d~ 198 (279)
..+.. .+.+++|+|||++|++++ .+..|++||+
T Consensus 163 ~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~ 242 (706)
T 2z3z_A 163 IDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHL 242 (706)
T ss_dssp SCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEET
T ss_pred cCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEEC
Confidence 12222 158899999999999987 4467999999
Q ss_pred CCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC-----eEEEEECCCCeEEEEE
Q 023642 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD-----CIYVYDLEANKLSLRI 265 (279)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~-----~i~vwd~~~~~~~~~~ 265 (279)
.+++...+... ..|...+.+++|+|||++|++++.++ .|++||+.+++....+
T Consensus 243 ~~~~~~~~~~~--------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~ 300 (706)
T 2z3z_A 243 ATGKTVYLQTG--------------EPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTL 300 (706)
T ss_dssp TTTEEEECCCC--------------SCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEE
T ss_pred CCCceEeeccC--------------CCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEE
Confidence 98875433211 01344789999999999999877665 8999999998433333
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.48 E-value=7e-12 Score=105.34 Aligned_cols=177 Identities=14% Similarity=0.172 Sum_probs=110.0
Q ss_pred ccCCCCee--e-c-cccceEeeeeecCCCCcee---eC---------CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC-
Q 023642 92 NYSGRGRF--S-A-ADCCHMLSRYLPVNGPWPV---DQ---------TTSRAYVSQFSADGSLFVAGFQASQIRIYDVE- 154 (279)
Q Consensus 92 ~~~~~~~~--~-~-~d~~~~~~~~~~~~~~~~l---~~---------h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~- 154 (279)
.++++|++ . + .++.+.+|++........+ .. +...+.+++|+|||+++++...++.|.+|++.
T Consensus 92 a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 92 AVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred EECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 34666653 2 2 4567778887542222111 11 22358899999999966777778899999998
Q ss_pred CCeEEeeeeeccCCCcceEEEEECCCCCEEEE-EeCCCeEEEEECCC--CceeeeeccccccceeEEeeCCCCCccccEE
Q 023642 155 RGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGS--GTMESLANVTEIHDGLDFSAADDGGYSFGIF 231 (279)
Q Consensus 155 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~i~d~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 231 (279)
++...............+..++|+|||+++++ ...++.+.+|++.. ++............+ + .....+.
T Consensus 172 ~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~--~------~~~~~~~ 243 (347)
T 3hfq_A 172 AGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPAD--Y------TAHNGAA 243 (347)
T ss_dssp TSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTT--C------CSCCEEE
T ss_pred CCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCC--C------CCCCcce
Confidence 55332211111122335788999999997665 55788999999874 443222111110000 0 0113588
Q ss_pred EEEEecCCCEEE-EecCCCeEEEEECC---CCeEEEEEeCCCcceeEEE
Q 023642 232 SLKFSTDGRELV-AGSSDDCIYVYDLE---ANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 232 ~~~~sp~g~~l~-t~s~d~~i~vwd~~---~~~~~~~~~~h~~~v~~v~ 276 (279)
.++|+|||++|+ +...++.|.+|++. +.+.+..+..+...+..+.
T Consensus 244 ~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~ 292 (347)
T 3hfq_A 244 AIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFD 292 (347)
T ss_dssp EEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEE
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEE
Confidence 999999999874 55568999999997 3356677776655555554
No 150
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.46 E-value=1.9e-12 Score=115.75 Aligned_cols=116 Identities=16% Similarity=0.092 Sum_probs=96.2
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEEC--CCCceeeeec
Q 023642 131 QFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV--GSGTMESLAN 208 (279)
Q Consensus 131 ~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~--~~~~~~~~~~ 208 (279)
+|+|++.++++++.|++|.+||..+++.+..+. .++ .+..++|+|||++|++++.|+.|++||+ .+++......
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~--~g~--~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVID--TGY--AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK 219 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEE--CST--TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEe--cCc--ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEe
Confidence 388999999999999999999999998776532 133 2889999999999999999999999999 6766533221
Q ss_pred cccccceeEEeeCCCCCccccEEEEEEec----CCCEEEEecC-CCeEEEEECCCCeEEEEEeC
Q 023642 209 VTEIHDGLDFSAADDGGYSFGIFSLKFST----DGRELVAGSS-DDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp----~g~~l~t~s~-d~~i~vwd~~~~~~~~~~~~ 267 (279)
+...+..++|+| ||++|++++. +++|.+||..++++++++..
T Consensus 220 -----------------~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~ 266 (543)
T 1nir_A 220 -----------------IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVST 266 (543)
T ss_dssp -----------------CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEEC
T ss_pred -----------------cCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecc
Confidence 112578999999 9999998884 89999999999999999875
No 151
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.44 E-value=2.5e-12 Score=107.07 Aligned_cols=149 Identities=15% Similarity=0.093 Sum_probs=105.3
Q ss_pred ccccceEeeeeecCCCCceee-CCCC-CeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCeEEeeeeeccC---CCcceEE
Q 023642 101 AADCCHMLSRYLPVNGPWPVD-QTTS-RAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKS---LRWTVTD 174 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~~~~~l~-~h~~-~V~~~~~spd~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~v~~ 174 (279)
+.++.+.+|+.........+. ++.. .+..++|+|+++++ +++..++.|.+||+.+++.+..... .. +...+..
T Consensus 8 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~-~~~~~~~~~~~~ 86 (337)
T 1pby_B 8 ARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDL-STPEERVKSLFG 86 (337)
T ss_dssp ETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEEC-CBTTEEEECTTC
T ss_pred CCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEc-CCcccccccccc
Confidence 345666677654333222333 2221 57889999999876 4556678999999999876654321 11 1225778
Q ss_pred EEECCCCCEEEEEe------------CCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEE
Q 023642 175 TSLSPDQRHLVYAS------------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL 242 (279)
Q Consensus 175 ~~~sp~~~~l~~~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 242 (279)
++|+|+|++|++++ .++.|.+||+.+++....... ...+.+++|+|+|++|
T Consensus 87 ~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l 149 (337)
T 1pby_B 87 AALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEA-----------------PRQITMLAWARDGSKL 149 (337)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEEC-----------------CSSCCCEEECTTSSCE
T ss_pred eEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeC-----------------CCCcceeEECCCCCEE
Confidence 99999999998886 579999999998776432211 1146778999999988
Q ss_pred EEecCCCeEEEEECCCCeEEEEEeCCC
Q 023642 243 VAGSSDDCIYVYDLEANKLSLRILAHT 269 (279)
Q Consensus 243 ~t~s~d~~i~vwd~~~~~~~~~~~~h~ 269 (279)
+++ ++.|++||+.+++.+..+..+.
T Consensus 150 ~~~--~~~i~~~d~~~~~~~~~~~~~~ 174 (337)
T 1pby_B 150 YGL--GRDLHVMDPEAGTLVEDKPIQS 174 (337)
T ss_dssp EEE--SSSEEEEETTTTEEEEEECSTT
T ss_pred EEe--CCeEEEEECCCCcEeeeeeccc
Confidence 887 5789999999999888887543
No 152
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.43 E-value=1.1e-12 Score=121.71 Aligned_cols=148 Identities=13% Similarity=0.094 Sum_probs=98.5
Q ss_pred ccCCCCee-eccccceEeeeeecCCCCceeeCCCCC-----eEEEEECCCCCEEEEEeCC---------CcEEEEEcCCC
Q 023642 92 NYSGRGRF-SAADCCHMLSRYLPVNGPWPVDQTTSR-----AYVSQFSADGSLFVAGFQA---------SQIRIYDVERG 156 (279)
Q Consensus 92 ~~~~~~~~-~~~d~~~~~~~~~~~~~~~~l~~h~~~-----V~~~~~spd~~~l~s~~~d---------~~i~iwd~~~~ 156 (279)
.+++++.+ .+.++.+.+|+.........+.+|... ...++|||||++|+.++.+ +.+.+||+.++
T Consensus 23 ~w~~dg~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~ 102 (740)
T 4a5s_A 23 RWISDHEYLYKQENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKR 102 (740)
T ss_dssp EECSSSEEEEEETTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTT
T ss_pred EECCCCcEEEEcCCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCC
Confidence 34555554 233778888887666655556666533 2447899999999998876 56679999999
Q ss_pred eEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCc----cccEEE
Q 023642 157 WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGY----SFGIFS 232 (279)
Q Consensus 157 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~ 232 (279)
+... +..+...+..++|||||+.||.+. ++.|++||+.++....+.. .......+.+..+--+ -+....
T Consensus 103 ~~~~----l~~~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~--~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 103 QLIT----EERIPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITW--TGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp EECC----SSCCCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCS--CCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred cEEE----cccCCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcC--CCCccceecCcccccccchhcCCCcc
Confidence 6432 456667899999999999999885 6799999999887644322 1111111211110000 012235
Q ss_pred EEEecCCCEEEEec
Q 023642 233 LKFSTDGRELVAGS 246 (279)
Q Consensus 233 ~~~sp~g~~l~t~s 246 (279)
+.|||||++|+.++
T Consensus 176 ~~wSpDg~~la~~~ 189 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQ 189 (740)
T ss_dssp EEECTTSSEEEEEE
T ss_pred eEECCCCCEEEEEE
Confidence 89999999998865
No 153
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.43 E-value=1.6e-13 Score=126.48 Aligned_cols=127 Identities=12% Similarity=0.113 Sum_probs=97.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCc---ceEEEEECCCCCEEEEEeCC---------Ce
Q 023642 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW---TVTDTSLSPDQRHLVYASMS---------PI 192 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~d---------~~ 192 (279)
..+.+++|+|||+++++ +.|+.|++||+.+++.... ...|.. .|.+++|||||++|++++.+ +.
T Consensus 17 ~~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~~---~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~ 92 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTVL---IEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGY 92 (723)
T ss_dssp CCCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEEE---ECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSE
T ss_pred ccccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEEE---eccccccccccceEEECCCCCEEEEEecCccceeecceee
Confidence 34677899999997766 7899999999999865433 234443 48999999999999998864 78
Q ss_pred EEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCc
Q 023642 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTV 270 (279)
Q Consensus 193 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~ 270 (279)
+++||+.+++...+... .+|...+..++|||||++|++++. +.|++||+.+++..+....+..
T Consensus 93 i~~~d~~~~~~~~l~~~--------------~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~ 155 (723)
T 1xfd_A 93 YVLSKIPHGDPQSLDPP--------------EVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKE 155 (723)
T ss_dssp EEEEESSSCCCEECCCT--------------TCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBT
T ss_pred EEEEECCCCceEeccCC--------------ccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCC
Confidence 88999998876332211 013345788999999999998885 7899999999888776665444
No 154
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.43 E-value=1.3e-12 Score=125.60 Aligned_cols=132 Identities=17% Similarity=0.160 Sum_probs=109.0
Q ss_pred CCCCeEEEEEC-CCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCc-ceEEEEECCCCCEEEEEeCCCeEE-EEECC
Q 023642 123 TTSRAYVSQFS-ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-TVTDTSLSPDQRHLVYASMSPIVH-IVDVG 199 (279)
Q Consensus 123 h~~~V~~~~~s-pd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-~v~~~~~sp~~~~l~~~~~d~~i~-i~d~~ 199 (279)
|...+.+++|| |||++|++++ ++.|.+|++..+.... ...|.. .+..++|+ ||+.|++++.+..+. +||+.
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~ 367 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK----VPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYR 367 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE----CSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETT
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE----ccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECC
Confidence 34479999999 9999999888 7899999998875432 345666 79999999 999999999888898 99998
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
++....+. +|...+..++|+|||++|++++.++.|++||+.+++....+.+|...+.++..
T Consensus 368 ~~~~~~l~-----------------~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~ 428 (1045)
T 1k32_A 368 TGKAEKFE-----------------ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTI 428 (1045)
T ss_dssp TCCEEECC-----------------CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEE
T ss_pred CCCceEec-----------------CCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEE
Confidence 87654322 13447899999999999999999999999999999988888888888776654
No 155
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.43 E-value=1.2e-11 Score=103.46 Aligned_cols=143 Identities=15% Similarity=0.081 Sum_probs=101.6
Q ss_pred cceEeeeeecCCCC--ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc---------------
Q 023642 104 CCHMLSRYLPVNGP--WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK--------------- 166 (279)
Q Consensus 104 ~~~~~~~~~~~~~~--~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--------------- 166 (279)
..+.+|++...... .....+...+.+++|+|||+ +++++. .|.+||+.+++.........
T Consensus 125 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 201 (349)
T 1jmx_B 125 PRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFW 201 (349)
T ss_dssp CEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCC
T ss_pred CeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--cEEEEeCCCCceeccccccccCCccccCccceeee
Confidence 67777776552211 12223445688999999999 555544 49999999886554321110
Q ss_pred --------------------------------------------------CCCcceEEEEECC-CCCEEEEEeCCCeEEE
Q 023642 167 --------------------------------------------------SLRWTVTDTSLSP-DQRHLVYASMSPIVHI 195 (279)
Q Consensus 167 --------------------------------------------------~~~~~v~~~~~sp-~~~~l~~~~~d~~i~i 195 (279)
.+...+..++|+| ++++++++ ++.|.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~ 279 (349)
T 1jmx_B 202 PHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAK 279 (349)
T ss_dssp CCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEE
T ss_pred cCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEE
Confidence 0011356778889 99999888 889999
Q ss_pred EECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
||+.+++....... ...+.+++|+|+|++|++++.++.|++||+.+++.+..++..
T Consensus 280 ~d~~~~~~~~~~~~-----------------~~~~~~~~~s~dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 280 YDLKQRKLIKAANL-----------------DHTYYCVAFDKKGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp EETTTTEEEEEEEC-----------------SSCCCEEEECSSSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EECccCeEEEEEcC-----------------CCCccceEECCCCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 99998876433221 114678999999998888888899999999999999998765
No 156
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.41 E-value=2e-11 Score=101.66 Aligned_cols=158 Identities=10% Similarity=0.042 Sum_probs=103.1
Q ss_pred ccCCCCee--ecccc----ceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEE-EEeCCCc-EEEEEcCCCeEEeee-
Q 023642 92 NYSGRGRF--SAADC----CHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFV-AGFQASQ-IRIYDVERGWKIQKD- 162 (279)
Q Consensus 92 ~~~~~~~~--~~~d~----~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~-s~~~d~~-i~iwd~~~~~~~~~~- 162 (279)
.+++++.+ .+.+. .+.+|+.........+. +.....+++|+|||++|+ +...++. |.+|++.....+...
T Consensus 90 ~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~-~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~ 168 (331)
T 3u4y_A 90 DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP-IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTG 168 (331)
T ss_dssp EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE-CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE
T ss_pred EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE-CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecC
Confidence 45666653 22223 67777654433323333 345569999999998655 4456688 999999864322111
Q ss_pred eeccCCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCCce---eeeeccccccceeEEeeCCCCCccccEEEEEEecC
Q 023642 163 ILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSGTM---ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD 238 (279)
Q Consensus 163 ~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 238 (279)
.........+..++|+|+|++++.+ ..++.|.+||+.+++. ..... ....+..++|+||
T Consensus 169 ~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~-----------------~~~~~~~~~~spd 231 (331)
T 3u4y_A 169 QEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVG-----------------TNNLPGTIVVSRD 231 (331)
T ss_dssp EEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEE-----------------CSSCCCCEEECTT
T ss_pred CccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeecc-----------------CCCCCceEEECCC
Confidence 1111333458999999999976554 4689999999998775 22111 1125678999999
Q ss_pred CCEEEEec-CCCeEEEEECCCCeE--EEEEeC
Q 023642 239 GRELVAGS-SDDCIYVYDLEANKL--SLRILA 267 (279)
Q Consensus 239 g~~l~t~s-~d~~i~vwd~~~~~~--~~~~~~ 267 (279)
|++|+.++ .++.|.+||+.+++. +..+..
T Consensus 232 g~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~ 263 (331)
T 3u4y_A 232 GSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH 263 (331)
T ss_dssp SSEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred CCEEEEEEcCCCEEEEEECCCCceeeeccccc
Confidence 99776554 577899999999887 555543
No 157
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.41 E-value=3.7e-11 Score=100.93 Aligned_cols=153 Identities=16% Similarity=0.106 Sum_probs=100.4
Q ss_pred ccCCCCeee-c----cccceEeeeeecCCCC--ceeeCCCCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCC-CeE--Ee
Q 023642 92 NYSGRGRFS-A----ADCCHMLSRYLPVNGP--WPVDQTTSRAYVSQFSADGSLFVAGF-QASQIRIYDVER-GWK--IQ 160 (279)
Q Consensus 92 ~~~~~~~~~-~----~d~~~~~~~~~~~~~~--~~l~~h~~~V~~~~~spd~~~l~s~~-~d~~i~iwd~~~-~~~--~~ 160 (279)
.++++|++. . .++.+.+|++...... ..+..+...+..++|+|||++|++++ .++.|.+|++.. +.. +.
T Consensus 46 a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~ 125 (347)
T 3hfq_A 46 ALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTD 125 (347)
T ss_dssp EECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEE
T ss_pred EEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecc
Confidence 356666542 1 1467778887433211 12345778889999999999988887 778999999963 322 21
Q ss_pred eeeeccC-------CCcceEEEEECCCCCEEEEEeCCCeEEEEECC-CCceeeeeccccccceeEEeeCCCCCccccEEE
Q 023642 161 KDILAKS-------LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG-SGTMESLANVTEIHDGLDFSAADDGGYSFGIFS 232 (279)
Q Consensus 161 ~~~~~~~-------~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 232 (279)
.. ...+ ....+.+++|+|||+++++...++.|++||+. ++.......... . ....+..
T Consensus 126 ~~-~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~--------~-----~g~~p~~ 191 (347)
T 3hfq_A 126 TV-QHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTM--------E-----AGFGPRH 191 (347)
T ss_dssp EE-ECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEEC--------C-----TTCCEEE
T ss_pred ee-ecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEc--------C-----CCCCCce
Confidence 11 1111 12348899999999966666678899999998 454432211100 0 1125678
Q ss_pred EEEecCCCEEEE-ecCCCeEEEEECCC
Q 023642 233 LKFSTDGRELVA-GSSDDCIYVYDLEA 258 (279)
Q Consensus 233 ~~~sp~g~~l~t-~s~d~~i~vwd~~~ 258 (279)
++|+|||+++++ ...++.|.+|++..
T Consensus 192 ~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 192 LVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 999999996665 56688999999874
No 158
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.40 E-value=5.3e-12 Score=113.71 Aligned_cols=125 Identities=8% Similarity=0.013 Sum_probs=93.3
Q ss_pred CeEEEEECCCCCE-EEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC----CeEEEEECCC
Q 023642 126 RAYVSQFSADGSL-FVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS----PIVHIVDVGS 200 (279)
Q Consensus 126 ~V~~~~~spd~~~-l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~i~i~d~~~ 200 (279)
.+...+|+||++. +++++.++.+.+||+.+++..... .+.. .+++|+|||++|++++.+ ..|++||+.+
T Consensus 111 ~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~----~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~ 184 (582)
T 3o4h_A 111 PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA----RLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSS 184 (582)
T ss_dssp SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE----EESS--CEEEEEEETTEEEEEEEEETTEEEEEEEETTT
T ss_pred CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee----cCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCC
Confidence 3456788888863 333344455669999988654321 2222 789999999999988876 7899999998
Q ss_pred CceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC--eEEEEECCCCeEEEEEeCCCcceeE
Q 023642 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD--CIYVYDLEANKLSLRILAHTVNIAL 274 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~--~i~vwd~~~~~~~~~~~~h~~~v~~ 274 (279)
++...+.. |...+..++|||||++|+++..++ .|++||+.+++.. .+.+|...+..
T Consensus 185 g~~~~l~~-----------------~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~ 242 (582)
T 3o4h_A 185 GGLRVFDS-----------------GEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSS 242 (582)
T ss_dssp CCCEEECC-----------------SSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHH
T ss_pred CCceEeec-----------------CCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhh
Confidence 88653321 445789999999999999888888 8999999999887 77777765544
No 159
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.39 E-value=6.1e-11 Score=100.20 Aligned_cols=133 Identities=13% Similarity=0.175 Sum_probs=90.2
Q ss_pred CCCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCeE------Eee----eeeccCCCcceEEEEECCCCCEEEEEe-CCC
Q 023642 124 TSRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWK------IQK----DILAKSLRWTVTDTSLSPDQRHLVYAS-MSP 191 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~-~d~~i~iwd~~~~~~------~~~----~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~ 191 (279)
...+.+++|+|||++|++++ .++.|.+|+++.... +.. ..........+..++|+|||+++++++ .++
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 34568899999999776555 578999999875431 110 111223344578999999999887777 689
Q ss_pred eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC--CCeEEEEECC--CCe--EEEEE
Q 023642 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLE--ANK--LSLRI 265 (279)
Q Consensus 192 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~--d~~i~vwd~~--~~~--~~~~~ 265 (279)
.|.+||+.++............ .+......++|+|||++|+++.. ++.|.+|++. +++ .+..+
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~-----------~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADT-----------VNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCS-----------SCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE
T ss_pred eEEEEEecCCceEEeEEEecCC-----------CCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe
Confidence 9999999877653332211100 02235689999999999876665 4899999995 444 45555
Q ss_pred eC
Q 023642 266 LA 267 (279)
Q Consensus 266 ~~ 267 (279)
..
T Consensus 303 ~~ 304 (361)
T 3scy_A 303 LT 304 (361)
T ss_dssp EC
T ss_pred cC
Confidence 54
No 160
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.39 E-value=5.6e-12 Score=105.51 Aligned_cols=150 Identities=11% Similarity=0.094 Sum_probs=103.0
Q ss_pred ccccceEeeeeecCCCCceeeCCC-CCeEEEEECCCCCEEE-EEeCCCcEEEEEcCCCeEEeeeeeccCC----CcceEE
Q 023642 101 AADCCHMLSRYLPVNGPWPVDQTT-SRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSL----RWTVTD 174 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~~~~~l~~h~-~~V~~~~~spd~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~----~~~v~~ 174 (279)
+.+..+.+|+.........+..+. ..+..++|+|++++++ ++..++.|.+||+.+++...... .... ...+..
T Consensus 18 ~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~-~~~~~~~~~~~~~~ 96 (349)
T 1jmx_B 18 NYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN-LSSVPGEVGRSMYS 96 (349)
T ss_dssp ETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE-SCCSTTEEEECSSC
T ss_pred CCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE-cccccccccccccc
Confidence 456677777764433333344332 2578899999998664 55578999999999987655432 1111 223788
Q ss_pred EEECCCCCEEEEEeCC------------CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEE
Q 023642 175 TSLSPDQRHLVYASMS------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL 242 (279)
Q Consensus 175 ~~~sp~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 242 (279)
++|+|||++|++++.+ +.|.+||+.+++....... +. +...+.+++|+|+|+ +
T Consensus 97 ~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~--------~~------~~~~~~~~~~s~dg~-l 161 (349)
T 1jmx_B 97 FAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRT--------FP------MPRQVYLMRAADDGS-L 161 (349)
T ss_dssp EEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEE--------EE------CCSSCCCEEECTTSC-E
T ss_pred eEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeee--------cc------CCCcccceeECCCCc-E
Confidence 9999999999988865 8999999987653221111 10 112578899999999 5
Q ss_pred EEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 243 VAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 243 ~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
+.++. .|++||+.+++.+..+..+
T Consensus 162 ~~~~~--~i~~~d~~~~~~~~~~~~~ 185 (349)
T 1jmx_B 162 YVAGP--DIYKMDVKTGKYTVALPLR 185 (349)
T ss_dssp EEESS--SEEEECTTTCCEEEEECST
T ss_pred EEccC--cEEEEeCCCCceecccccc
Confidence 55543 3999999999988888754
No 161
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.39 E-value=6.7e-12 Score=114.64 Aligned_cols=133 Identities=15% Similarity=0.105 Sum_probs=97.4
Q ss_pred CCCceeeC-----CCCCeEEEEECCCCCEEEEEeCC----------CcEEEEEcCC------CeEEeeeeecc-CCCcce
Q 023642 115 NGPWPVDQ-----TTSRAYVSQFSADGSLFVAGFQA----------SQIRIYDVER------GWKIQKDILAK-SLRWTV 172 (279)
Q Consensus 115 ~~~~~l~~-----h~~~V~~~~~spd~~~l~s~~~d----------~~i~iwd~~~------~~~~~~~~~~~-~~~~~v 172 (279)
.....+.. |...+..++|||||+.|++++.| ..|++||+.+ +... . +. .+...+
T Consensus 115 ~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~---l~~~~~~~~ 190 (662)
T 3azo_A 115 AVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-E---LSDDAHRFV 190 (662)
T ss_dssp CCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-E---SSCSCSSEE
T ss_pred CCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-E---EEecCCCcc
Confidence 34445665 67789999999999999998876 5899999988 5432 2 23 444578
Q ss_pred EEEEECCCCCEEEEEeCC--------CeEEEEECC-CC---ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCC
Q 023642 173 TDTSLSPDQRHLVYASMS--------PIVHIVDVG-SG---TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR 240 (279)
Q Consensus 173 ~~~~~sp~~~~l~~~~~d--------~~i~i~d~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 240 (279)
..++|+|||++|+.++.+ ..|++||+. ++ +...+.. . +...+..+.|+|||+
T Consensus 191 ~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~-----------~-----~~~~~~~~~~spdg~ 254 (662)
T 3azo_A 191 TGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLG-----------G-----PEEAIAQAEWAPDGS 254 (662)
T ss_dssp CCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEE-----------E-----TTBCEEEEEECTTSC
T ss_pred cCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCC-----------C-----CCceEcceEECCCCe
Confidence 889999999999987754 379999998 56 2222211 1 234789999999999
Q ss_pred EEEEecCCC--eEEEEECCCCeEEEEEeC
Q 023642 241 ELVAGSSDD--CIYVYDLEANKLSLRILA 267 (279)
Q Consensus 241 ~l~t~s~d~--~i~vwd~~~~~~~~~~~~ 267 (279)
+++++..++ .|++||+.+++....+.+
T Consensus 255 l~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 255 LIVATDRTGWWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EEEEECTTSSCEEEEECTTTCCEEESSCC
T ss_pred EEEEECCCCCeEEEEEECCCCceeecccc
Confidence 888888787 777888777766544443
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.38 E-value=1.3e-10 Score=98.61 Aligned_cols=154 Identities=9% Similarity=-0.073 Sum_probs=99.0
Q ss_pred cccceEeeeeecCCC-Cceee----CCCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcC-CCeEEeee-eeccCCCcceE
Q 023642 102 ADCCHMLSRYLPVNG-PWPVD----QTTSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVE-RGWKIQKD-ILAKSLRWTVT 173 (279)
Q Consensus 102 ~d~~~~~~~~~~~~~-~~~l~----~h~~~V~~~~~spd~~~l~s~~~-d~~i~iwd~~-~~~~~~~~-~~~~~~~~~v~ 173 (279)
.++.+.+|++..... ...+. .+...+.+++|+|||++|+++.. ++.|++||+. +++..... .....+...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 356677787753221 11222 35678999999999998887764 6799999998 67542211 11112345689
Q ss_pred EEEECCCCCEEEEEeC-CCeEEEEECC--CCceee-eeccccccceeEEeeCCCCCccc------cEEEEE-EecCCCEE
Q 023642 174 DTSLSPDQRHLVYASM-SPIVHIVDVG--SGTMES-LANVTEIHDGLDFSAADDGGYSF------GIFSLK-FSTDGREL 242 (279)
Q Consensus 174 ~~~~sp~~~~l~~~~~-d~~i~i~d~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~v~~~~-~sp~g~~l 242 (279)
.++|+|||++|++++. ++.+.+|++. +++... ....... +....+|.. .+..++ |+|||++|
T Consensus 197 ~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~i~~~spdG~~l 269 (365)
T 1jof_A 197 WVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLI-------PPGIPDRDPETGKGLYRADVCALTFSGKYM 269 (365)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESS-------CTTCCCBCTTTSSBSEEEEEEEECTTSSEE
T ss_pred EeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcC-------CCCcCCcccccccccccccEEEECCCCCEE
Confidence 9999999999888774 7899999865 454321 0000000 000011222 478999 99999998
Q ss_pred EEecCC-C-----eEEEEECC-CCeEE
Q 023642 243 VAGSSD-D-----CIYVYDLE-ANKLS 262 (279)
Q Consensus 243 ~t~s~d-~-----~i~vwd~~-~~~~~ 262 (279)
+++..+ . +|.+|++. +++..
T Consensus 270 ~v~~~~~~~~~~~~i~v~~~~~~g~~~ 296 (365)
T 1jof_A 270 FASSRANKFELQGYIAGFKLRDCGSIE 296 (365)
T ss_dssp EEEEEESSTTSCCEEEEEEECTTSCEE
T ss_pred EEECCCCCCCCCCeEEEEEECCCCCEE
Confidence 876543 2 89999996 56654
No 163
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.33 E-value=6.7e-11 Score=100.63 Aligned_cols=147 Identities=10% Similarity=0.065 Sum_probs=107.8
Q ss_pred eccccceEeeeeecCC----------CCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 100 SAADCCHMLSRYLPVN----------GPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~----------~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
.+....+++|+..... .+.....+.. |+.++| |+++|+++ .++.|++||+.+-..... ...|.
T Consensus 54 a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~~---~~~~~ 126 (388)
T 1xip_A 54 AASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFRT---VTSFE 126 (388)
T ss_dssp EEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEEE---EEECS
T ss_pred EeCCCEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccCc---cceee
Confidence 4444566667654332 2223445777 999999 99999999 889999999987643332 23455
Q ss_pred cceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC
Q 023642 170 WTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249 (279)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~ 249 (279)
.++.++.+.+. .++++..||.+.+||+.++..... ...|.+++|||+| ++.|..|+
T Consensus 127 ~~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~--------------------~~~Vs~v~WSpkG--~~vg~~dg 182 (388)
T 1xip_A 127 KPVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL--------------------AQNVTSFDVTNSQ--LAVLLKDR 182 (388)
T ss_dssp SCEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE--------------------EESEEEEEECSSE--EEEEETTS
T ss_pred cceeeEEecCC--CEEEEECCCCEEEEEccCCccccc--------------------cCCceEEEEcCCc--eEEEEcCC
Confidence 67888777654 388899999999999998776431 1279999999999 67788899
Q ss_pred eEEEEECCCCeE--EEEE------e---CCCcceeEEEe
Q 023642 250 CIYVYDLEANKL--SLRI------L---AHTVNIALWIT 277 (279)
Q Consensus 250 ~i~vwd~~~~~~--~~~~------~---~h~~~v~~v~~ 277 (279)
++++|+...++. ..++ . +|...|.++.+
T Consensus 183 ~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~w 221 (388)
T 1xip_A 183 SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTI 221 (388)
T ss_dssp CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEE
T ss_pred cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEE
Confidence 999999988775 6667 2 36667777654
No 164
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.32 E-value=3.2e-11 Score=110.18 Aligned_cols=147 Identities=16% Similarity=0.108 Sum_probs=100.8
Q ss_pred Cceee-CCCCCeEEEEECCCCCEEEEEeCC--------CcEEEEEcC-CCe--EEeeeeeccCCCcceEEEEECCCCCEE
Q 023642 117 PWPVD-QTTSRAYVSQFSADGSLFVAGFQA--------SQIRIYDVE-RGW--KIQKDILAKSLRWTVTDTSLSPDQRHL 184 (279)
Q Consensus 117 ~~~l~-~h~~~V~~~~~spd~~~l~s~~~d--------~~i~iwd~~-~~~--~~~~~~~~~~~~~~v~~~~~sp~~~~l 184 (279)
...+. .+...+..++|||||++|+.++.+ ..|++||+. ++. .... ....+...+..++|+|||+++
T Consensus 179 ~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~--l~~~~~~~~~~~~~spdg~l~ 256 (662)
T 3azo_A 179 VRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRT--LLGGPEEAIAQAEWAPDGSLI 256 (662)
T ss_dssp SEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEE--EEEETTBCEEEEEECTTSCEE
T ss_pred eeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEE--eCCCCCceEcceEECCCCeEE
Confidence 34455 667788899999999999887755 379999999 562 2222 223456679999999999988
Q ss_pred EEEeCCC--eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEE--ECCCCe
Q 023642 185 VYASMSP--IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVY--DLEANK 260 (279)
Q Consensus 185 ~~~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vw--d~~~~~ 260 (279)
++++.++ .|.+||+.+++...+...........+ ...+..++|+|+++++++++. +.+++| |+.+++
T Consensus 257 ~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w--------~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 257 VATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLW--------TPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCC--------STTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred EEECCCCCeEEEEEECCCCceeecccccccccCccc--------cccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 8888888 677777767765433321110000000 011456899999999999988 888888 666565
Q ss_pred EEEEEeCCCcceeEE
Q 023642 261 LSLRILAHTVNIALW 275 (279)
Q Consensus 261 ~~~~~~~h~~~v~~v 275 (279)
+..+..|...+..+
T Consensus 328 -~~~l~~~~~~~~~~ 341 (662)
T 3azo_A 328 -LVDAAGPWTEWAAT 341 (662)
T ss_dssp -EEECCSSCCEEEEE
T ss_pred -EEEecCCCCeEEEE
Confidence 67787777666554
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.29 E-value=1.7e-11 Score=113.73 Aligned_cols=116 Identities=16% Similarity=0.158 Sum_probs=89.7
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCc-----ceEEEEECCCCCEEEEEeCC---------
Q 023642 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW-----TVTDTSLSPDQRHLVYASMS--------- 190 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~-----~v~~~~~sp~~~~l~~~~~d--------- 190 (279)
....+++|+||+++++++ |+.|++||+.++++... +..|.. ...+++|||||++|+.++.+
T Consensus 17 ~~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~ 91 (740)
T 4a5s_A 17 LKLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVF---LENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYT 91 (740)
T ss_dssp CCCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEE---ECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEE
T ss_pred ccccccEECCCCcEEEEc--CCcEEEEECCCCceEEE---EechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccc
Confidence 345679999999988886 89999999999976432 233332 23458999999999998876
Q ss_pred CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEE
Q 023642 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSL 263 (279)
Q Consensus 191 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~ 263 (279)
+.+.+||+.+++...+.. |...+..++|||||+.||.+. ++.|++||+.+++..+
T Consensus 92 ~~~~~~d~~~~~~~~l~~-----------------~~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~ 146 (740)
T 4a5s_A 92 ASYDIYDLNKRQLITEER-----------------IPNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYR 146 (740)
T ss_dssp EEEEEEETTTTEECCSSC-----------------CCTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEE
T ss_pred eEEEEEECCCCcEEEccc-----------------CCCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEE
Confidence 567799999988643221 334789999999999999875 6899999999887554
No 166
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.29 E-value=6.6e-12 Score=115.80 Aligned_cols=114 Identities=17% Similarity=0.189 Sum_probs=86.9
Q ss_pred EEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCc---ceEEEEECCCCCEEEEEeC---------CCeEEEE
Q 023642 129 VSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRW---TVTDTSLSPDQRHLVYASM---------SPIVHIV 196 (279)
Q Consensus 129 ~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~---~v~~~~~sp~~~~l~~~~~---------d~~i~i~ 196 (279)
+++|+||+++++ .+.|+.|++||+.+++.... ...+.. .+.+++|||||++|++++. ++.|++|
T Consensus 20 ~~~~s~dg~~~~-~~~d~~i~~~~~~~g~~~~~---~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~ 95 (719)
T 1z68_A 20 FPNWISGQEYLH-QSADNNIVLYNIETGQSYTI---LSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIY 95 (719)
T ss_dssp CCEESSSSEEEE-ECTTSCEEEEESSSCCEEEE---ECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEE
T ss_pred ccEECCCCeEEE-EcCCCCEEEEEcCCCcEEEE---EccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEE
Confidence 679999996554 45699999999999876443 222222 3899999999999998876 7899999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEE
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLR 264 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~ 264 (279)
|+.+++....... ...+..++|||||++|+++. ++.|++||+.+++..+.
T Consensus 96 d~~~g~~~~~~~l-----------------~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l 145 (719)
T 1z68_A 96 DLSNGEFVRGNEL-----------------PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQI 145 (719)
T ss_dssp ETTTTEECCSSCC-----------------CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEEC
T ss_pred ECCCCccccceec-----------------CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEE
Confidence 9999876211111 01577899999999999886 78999999998876543
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.26 E-value=2.3e-10 Score=97.36 Aligned_cols=139 Identities=17% Similarity=0.063 Sum_probs=96.5
Q ss_pred ceeeCCCCCeEE-----EEECCCCCEEEEEeC-CC--cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC
Q 023642 118 WPVDQTTSRAYV-----SQFSADGSLFVAGFQ-AS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM 189 (279)
Q Consensus 118 ~~l~~h~~~V~~-----~~~spd~~~l~s~~~-d~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 189 (279)
..+..|...... .+|||||++|+.++. ++ .|.+||+.+++.... ...+...+..+.|+|||+.|+.++.
T Consensus 24 ~~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~l---t~~~~~~~~~~~~spdg~~l~~~~~ 100 (388)
T 3pe7_A 24 TRLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQL---TEGRGDNTFGGFLSPDDDALFYVKD 100 (388)
T ss_dssp EECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEEC---CCSSCBCSSSCEECTTSSEEEEEET
T ss_pred EEecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEe---eeCCCCCccceEEcCCCCEEEEEeC
Confidence 345566665665 889999999998887 66 488899998865442 2344444556789999999999999
Q ss_pred CCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEE--EEecCCCEEEEe----------------------
Q 023642 190 SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSL--KFSTDGRELVAG---------------------- 245 (279)
Q Consensus 190 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~sp~g~~l~t~---------------------- 245 (279)
++.+++||+.+++...+... +...+... .++|++++++..
T Consensus 101 ~~~l~~~d~~~g~~~~~~~~----------------~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (388)
T 3pe7_A 101 GRNLMRVDLATLEENVVYQV----------------PAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFT 164 (388)
T ss_dssp TTEEEEEETTTCCEEEEEEC----------------CTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGG
T ss_pred CCeEEEEECCCCcceeeeec----------------hhhcccccceeECCCCCeeccccccCcccccccccchhhhhhcc
Confidence 99999999999886544322 11133223 348999988742
Q ss_pred cCCCeEEEEECCCCeEEEEEeCCCcceeEEE
Q 023642 246 SSDDCIYVYDLEANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 246 s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~ 276 (279)
..+..|++||+.+++.... ..+...+..+.
T Consensus 165 ~~~~~l~~~d~~~g~~~~l-~~~~~~~~~~~ 194 (388)
T 3pe7_A 165 KPCCRLMRVDLKTGESTVI-LQENQWLGHPI 194 (388)
T ss_dssp CCCEEEEEEETTTCCEEEE-EEESSCEEEEE
T ss_pred CCcceEEEEECCCCceEEe-ecCCccccccE
Confidence 2446899999998865443 33444454443
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.26 E-value=3.5e-10 Score=95.88 Aligned_cols=155 Identities=13% Similarity=0.079 Sum_probs=99.8
Q ss_pred ccCCCCee--ec--cccceEeeeeec-CCCC--ceee--CCCCCeEEEEECCCCCEEEEEeC-CCcEEEEEcC--CCeEE
Q 023642 92 NYSGRGRF--SA--ADCCHMLSRYLP-VNGP--WPVD--QTTSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVE--RGWKI 159 (279)
Q Consensus 92 ~~~~~~~~--~~--~d~~~~~~~~~~-~~~~--~~l~--~h~~~V~~~~~spd~~~l~s~~~-d~~i~iwd~~--~~~~~ 159 (279)
.++++|++ .+ .++.+.+|++.+ .... ..+. .|...+..++|+|||++|++++. ++.|.+|+++ +++..
T Consensus 151 ~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~ 230 (365)
T 1jof_A 151 VFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPV 230 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEE
T ss_pred EECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEE
Confidence 46788763 22 245677787763 2211 1122 24677999999999999988775 6899999875 45432
Q ss_pred e---eeeecc----CCCc------ceEEEE-ECCCCCEEEEEeCC-C-----eEEEEECC-CCceeeeeccccccceeEE
Q 023642 160 Q---KDILAK----SLRW------TVTDTS-LSPDQRHLVYASMS-P-----IVHIVDVG-SGTMESLANVTEIHDGLDF 218 (279)
Q Consensus 160 ~---~~~~~~----~~~~------~v~~~~-~sp~~~~l~~~~~d-~-----~i~i~d~~-~~~~~~~~~~~~~~~~~~~ 218 (279)
. ...... ++.. .+..++ |+|||++|++++.+ . .|.+|++. +++....... .
T Consensus 231 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~--------~ 302 (365)
T 1jof_A 231 YTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFL--------S 302 (365)
T ss_dssp EEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEE--------E
T ss_pred EccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeee--------e
Confidence 1 111111 2222 488999 99999998876643 2 89999996 5554321110 0
Q ss_pred eeCCCCCccccEEEEEEec---CCCEEEEecCC-CeEEEEECCCC
Q 023642 219 SAADDGGYSFGIFSLKFST---DGRELVAGSSD-DCIYVYDLEAN 259 (279)
Q Consensus 219 ~~~~~~~~~~~v~~~~~sp---~g~~l~t~s~d-~~i~vwd~~~~ 259 (279)
.. +...+..++|+| ||++|++++.+ +.|.+|++...
T Consensus 303 ~~-----~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 303 PT-----PTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EC-----SSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred ec-----CCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 00 111345688999 89999988864 89999998765
No 169
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.23 E-value=2.3e-10 Score=105.49 Aligned_cols=137 Identities=15% Similarity=0.180 Sum_probs=96.5
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCC-----cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCe----
Q 023642 122 QTTSRAYVSQFSADGSLFVAGFQAS-----QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI---- 192 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~---- 192 (279)
+|...+..++|||||++|+.+..++ .|++||+.+++...... ... .+..++|+|||+.|+.++.++.
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~--~~~--~~~~~~wspDg~~l~~~~~~~~~~~~ 197 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVL--ERV--KFSCMAWTHDGKGMFYNAYPQQDGKS 197 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEE--EEE--CSCCEEECTTSSEEEEEECCCCSSCC
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccc--cCc--ccceEEEEeCCCEEEEEEECCccccc
Confidence 3445688999999999998775543 89999999997655322 111 2677999999999999887765
Q ss_pred ------------EEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC-----CCeEEEEE
Q 023642 193 ------------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-----DDCIYVYD 255 (279)
Q Consensus 193 ------------i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~-----d~~i~vwd 255 (279)
|++|++.++...... .+... .|...+..+.|+|||++|+..+. +..|++||
T Consensus 198 ~~~~~~~~~~~~v~~~~l~t~~~~~~~---------v~~~~---~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d 265 (710)
T 2xdw_A 198 DGTETSTNLHQKLYYHVLGTDQSEDIL---------CAEFP---DEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCD 265 (710)
T ss_dssp SSSCCCCCCCCEEEEEETTSCGGGCEE---------EECCT---TCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEE
T ss_pred cccccccCCCCEEEEEECCCCcccceE---------EeccC---CCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEE
Confidence 999999877632111 01110 13336788999999999887654 56899999
Q ss_pred CCC------Ce-EEEEEeCCCcceeE
Q 023642 256 LEA------NK-LSLRILAHTVNIAL 274 (279)
Q Consensus 256 ~~~------~~-~~~~~~~h~~~v~~ 274 (279)
+.+ +. ....+..+...+..
T Consensus 266 ~~~~~~~~~~~~~~~~l~~~~~~~~~ 291 (710)
T 2xdw_A 266 LQQESNGITGILKWVKLIDNFEGEYD 291 (710)
T ss_dssp GGGSSSSSCSSCCCEEEECSSSSCEE
T ss_pred CcccccccCCccceEEeeCCCCcEEE
Confidence 986 43 45666666555443
No 170
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.16 E-value=2.5e-10 Score=105.04 Aligned_cols=136 Identities=13% Similarity=0.091 Sum_probs=92.6
Q ss_pred CCCCCeEEEEECCCCCEEEE-----EeCCCcEEEEEcCCCeEE-eeeeeccCCCcceEEEEECCCCCEEEEEeCCCe---
Q 023642 122 QTTSRAYVSQFSADGSLFVA-----GFQASQIRIYDVERGWKI-QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI--- 192 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s-----~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~--- 192 (279)
+|...+..++|||||++|+. |+.+..|++||+.+++.+ .. ..... ....++|+|||+.|+.++.|..
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~--~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~ 193 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD--VIEGG--KYATPKWTPDSKGFYYEWLPTDPSI 193 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC--CBSCC--TTCCCEECTTSSEEEEEECCCCTTS
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc--ccCcc--cccceEEecCCCEEEEEEecCCCCC
Confidence 45667999999999999983 444568999999998654 11 11111 1267899999999999988776
Q ss_pred ----------EEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC----eEEEEECCC
Q 023642 193 ----------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD----CIYVYDLEA 258 (279)
Q Consensus 193 ----------i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~----~i~vwd~~~ 258 (279)
|++|++.++...... .+.. ..+...+..+.|||||++|+..+.++ .|++||..+
T Consensus 194 ~~~~~~~~~~v~~~~l~t~~~~~~l---------v~~~---~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~ 261 (695)
T 2bkl_A 194 KVDERPGYTTIRYHTLGTEPSKDTV---------VHER---TGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGE 261 (695)
T ss_dssp CGGGGGGGCEEEEEETTSCGGGCEE---------EECC---CCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTC
T ss_pred ccccCCCCCEEEEEECCCCchhceE---------EEec---CCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCC
Confidence 999999887632110 0111 01334788999999999998777555 788887766
Q ss_pred CeEEEEEeCCCcceeE
Q 023642 259 NKLSLRILAHTVNIAL 274 (279)
Q Consensus 259 ~~~~~~~~~h~~~v~~ 274 (279)
++. ..+..+...+..
T Consensus 262 ~~~-~~l~~~~~~~~~ 276 (695)
T 2bkl_A 262 KDF-RLLVKGVGAKYE 276 (695)
T ss_dssp SSC-EEEEECSSCCEE
T ss_pred Cce-EEeecCCCceEE
Confidence 543 344444444333
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.16 E-value=1.2e-09 Score=92.89 Aligned_cols=151 Identities=9% Similarity=-0.033 Sum_probs=99.1
Q ss_pred CccCCCCee---ecc-ccceEeeeeec--CCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeee
Q 023642 91 GNYSGRGRF---SAA-DCCHMLSRYLP--VNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDIL 164 (279)
Q Consensus 91 ~~~~~~~~~---~~~-d~~~~~~~~~~--~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 164 (279)
..++++|+. .+. ++...+|.+.. ........++...+..++|+|||+.|+.++.++.|++||+.+++....
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~--- 117 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVV--- 117 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEE---
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcceee---
Confidence 356777763 233 44333443332 222223445555556788999999999999999999999999865432
Q ss_pred ccCCCcceEEE--EECCCCCEEEEEe----------------------CCCeEEEEECCCCceeeeeccccccceeEEee
Q 023642 165 AKSLRWTVTDT--SLSPDQRHLVYAS----------------------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSA 220 (279)
Q Consensus 165 ~~~~~~~v~~~--~~sp~~~~l~~~~----------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 220 (279)
...+...+... .++|++++++... .+..|++||+.+++...+..
T Consensus 118 ~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~------------ 185 (388)
T 3pe7_A 118 YQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ------------ 185 (388)
T ss_dssp EECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE------------
T ss_pred eechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeec------------
Confidence 12333334333 4589999987432 34689999999987654322
Q ss_pred CCCCCccccEEEEEEec-CCCEEEEecCC------CeEEEEECCCCeE
Q 023642 221 ADDGGYSFGIFSLKFST-DGRELVAGSSD------DCIYVYDLEANKL 261 (279)
Q Consensus 221 ~~~~~~~~~v~~~~~sp-~g~~l~t~s~d------~~i~vwd~~~~~~ 261 (279)
+...+..+.|+| ||+.|+..+.+ ..|.++|+.++..
T Consensus 186 -----~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~ 228 (388)
T 3pe7_A 186 -----ENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM 228 (388)
T ss_dssp -----ESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC
T ss_pred -----CCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce
Confidence 223688999999 99988876643 3788889875543
No 172
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.10 E-value=7.4e-09 Score=87.75 Aligned_cols=101 Identities=15% Similarity=0.050 Sum_probs=71.6
Q ss_pred ccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEe----------CCCcEEEEEcCCCeEEeeeeeccC---CC
Q 023642 103 DCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILAKS---LR 169 (279)
Q Consensus 103 d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~~---~~ 169 (279)
++.+.+|+.........+..+..+ .++|+||+++++++. .++.|.+||+.+.+.+..+..... +.
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 456666664333323335555444 899999999998886 367899999998877665433211 22
Q ss_pred cceEEEEECCCCCEEEEEeC--CCeEEEEECCCCceee
Q 023642 170 WTVTDTSLSPDQRHLVYASM--SPIVHIVDVGSGTMES 205 (279)
Q Consensus 170 ~~v~~~~~sp~~~~l~~~~~--d~~i~i~d~~~~~~~~ 205 (279)
.....++|+|||++|++++. ++.|.+||+.+++...
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~ 145 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVE 145 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEE
Confidence 35678999999999998874 5799999999887644
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.08 E-value=9e-09 Score=83.85 Aligned_cols=120 Identities=13% Similarity=0.171 Sum_probs=86.4
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCC-eEEEEECCC
Q 023642 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP-IVHIVDVGS 200 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~-~i~i~d~~~ 200 (279)
++...+..++++|+|+++++...++.|++||... ..+... ...++...+..++++|+|+++++...++ .|.+||..
T Consensus 161 ~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g-~~~~~~-~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~- 237 (286)
T 1q7f_A 161 KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEG-QYLRQI-GGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD- 237 (286)
T ss_dssp TTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTC-CEEEEE-SCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT-
T ss_pred CccCCcEEEEECCCCCEEEEECCCCEEEEEcCCC-CEEEEE-ccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC-
Confidence 4556789999999999888888889999999854 343332 1122335689999999999888888776 99999965
Q ss_pred CceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
++...... ... ....+.+++++|+|+++++ +.+++|++|++...
T Consensus 238 g~~~~~~~-----------~~~---~~~~~~~i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 238 GQLISALE-----------SKV---KHAQCFDVALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp SCEEEEEE-----------ESS---CCSCEEEEEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred CCEEEEEc-----------ccC---CCCcceeEEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 33322111 110 1124789999999987777 56899999998654
No 174
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.06 E-value=2.3e-08 Score=83.50 Aligned_cols=138 Identities=13% Similarity=0.048 Sum_probs=95.5
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCe-EEeeeeec------cCCCcceEEEEECC-CCCEEEEEe-CCCe
Q 023642 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW-KIQKDILA------KSLRWTVTDTSLSP-DQRHLVYAS-MSPI 192 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~------~~~~~~v~~~~~sp-~~~~l~~~~-~d~~ 192 (279)
++......++++|+|+++++...+++|++||..... .+..+... ..+......++++| ++.++++.+ .++.
T Consensus 88 ~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~ 167 (329)
T 3fvz_A 88 NLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSR 167 (329)
T ss_dssp TTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCE
T ss_pred CccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCe
Confidence 455678999999999988988889999999986542 22221100 23334688999999 788888876 6899
Q ss_pred EEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC-CCEEEEecCCCeEEEEECCCCeEEEEEe
Q 023642 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 193 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
|++||. ++............ .....++-.....++++|+ +.++++...++.|++||..+|+.+.++.
T Consensus 168 I~~~~~-~g~~~~~~~~~g~~------~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~ 235 (329)
T 3fvz_A 168 IVQFSP-SGKFVTQWGEESSG------SSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIK 235 (329)
T ss_dssp EEEECT-TSCEEEEECEECCS------SSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred EEEEcC-CCCEEEEeccCCCC------CCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEe
Confidence 999994 45443221110000 0000012235889999999 7777787888999999999899988884
No 175
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.05 E-value=2.1e-08 Score=83.67 Aligned_cols=140 Identities=9% Similarity=0.066 Sum_probs=96.7
Q ss_pred CCCCCeEEEEECC-CCCEEEEEe-CCCcEEEEEcCCCeEEeeeeecc-------CCCcceEEEEECCC-CCEEEEEeCCC
Q 023642 122 QTTSRAYVSQFSA-DGSLFVAGF-QASQIRIYDVERGWKIQKDILAK-------SLRWTVTDTSLSPD-QRHLVYASMSP 191 (279)
Q Consensus 122 ~h~~~V~~~~~sp-d~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~-------~~~~~v~~~~~sp~-~~~l~~~~~d~ 191 (279)
++......++++| ++.++++.+ .++.|++||. .+..+....... .+-.....++++|+ ++++++...++
T Consensus 140 ~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~ 218 (329)
T 3fvz_A 140 NHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENG 218 (329)
T ss_dssp TCCSSEEEEEECTTTCCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTT
T ss_pred cccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCC
Confidence 4556789999999 888888886 6899999994 454444321110 12234889999998 67777777889
Q ss_pred eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEec------CCCEEEEecCCCeEEEEECCCCeEEEEE
Q 023642 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST------DGRELVAGSSDDCIYVYDLEANKLSLRI 265 (279)
Q Consensus 192 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp------~g~~l~t~s~d~~i~vwd~~~~~~~~~~ 265 (279)
.|++||..+++........ .+...+..++|+| +|+.+++...+..|++||..+++.+..+
T Consensus 219 ~I~~~~~~~G~~~~~~~~~--------------~~~~~~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~ 284 (329)
T 3fvz_A 219 RIQCFKTDTKEFVREIKHA--------------SFGRNVFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVF 284 (329)
T ss_dssp EEEEEETTTCCEEEEECCT--------------TTTTCEEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEE
T ss_pred EEEEEECCCCcEEEEEecc--------------ccCCCcceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEE
Confidence 9999999877764332111 1233678889998 4443333344568999999999999888
Q ss_pred e---CCCcceeEEE
Q 023642 266 L---AHTVNIALWI 276 (279)
Q Consensus 266 ~---~h~~~v~~v~ 276 (279)
. ++...+..+.
T Consensus 285 ~~~~~~~~~p~~ia 298 (329)
T 3fvz_A 285 KPVRKHFDMPHDIV 298 (329)
T ss_dssp CCSSSCCSSEEEEE
T ss_pred cCCCCccCCeeEEE
Confidence 4 5555555554
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.04 E-value=3.2e-08 Score=80.57 Aligned_cols=129 Identities=10% Similarity=0.153 Sum_probs=94.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 023642 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~ 202 (279)
+...+..++++|+|+++++...++.|.+||.. +...... ....+...+.+++++|+|+++++...++.|++||.....
T Consensus 119 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~-~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~g~~ 196 (286)
T 1q7f_A 119 ILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKF-GCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYEGQY 196 (286)
T ss_dssp TCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEE-ECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETTCCE
T ss_pred cCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEe-CCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCCCCE
Confidence 45678999999999988888888999999965 4333332 112344468999999999988887889999999985432
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC-eEEEEECCCCeEEEEEeCCC
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD-CIYVYDLEANKLSLRILAHT 269 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~-~i~vwd~~~~~~~~~~~~h~ 269 (279)
...+. .. ++...+..++++|+|+++++...++ .|.+||. +++.+..+..+.
T Consensus 197 ~~~~~------------~~---g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~ 248 (286)
T 1q7f_A 197 LRQIG------------GE---GITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKV 248 (286)
T ss_dssp EEEES------------CT---TTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESS
T ss_pred EEEEc------------cC---CccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccC
Confidence 22111 00 1223688999999999888887776 9999995 577777776554
No 177
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.03 E-value=1.8e-08 Score=82.54 Aligned_cols=127 Identities=15% Similarity=0.086 Sum_probs=88.2
Q ss_pred CceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccC-CCcceEEEEECCCCCEEEEEe-------
Q 023642 117 PWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS-LRWTVTDTSLSPDQRHLVYAS------- 188 (279)
Q Consensus 117 ~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~------- 188 (279)
...+..+...+.+++++|+|+++++...++.|.+||..+++.......... ....+.+++++|+|+++++.+
T Consensus 61 ~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~ 140 (296)
T 3e5z_A 61 LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKP 140 (296)
T ss_dssp EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCG
T ss_pred eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccc
Confidence 444666778899999999999888877788999999987754322111111 122467899999999888732
Q ss_pred ----------CCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECC-
Q 023642 189 ----------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE- 257 (279)
Q Consensus 189 ----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~- 257 (279)
..+.|..++.. ++...... +......++|+|+|+.|++.+.++.|++||+.
T Consensus 141 ~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-----------------~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~ 202 (296)
T 3e5z_A 141 EEGYGGEMELPGRWVFRLAPD-GTLSAPIR-----------------DRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNA 202 (296)
T ss_dssp GGSSCCCCCSSSCEEEEECTT-SCEEEEEC-----------------CCSSEEEEEECTTSCEEEEETTTTEEEEEEECS
T ss_pred cccccccccCCCcEEEEECCC-CCEEEeec-----------------CCCCCccEEECCCCCEEEEeCCCCeEEEEEECC
Confidence 13456666655 44322111 22367889999999998777888999999997
Q ss_pred CCeE
Q 023642 258 ANKL 261 (279)
Q Consensus 258 ~~~~ 261 (279)
+++.
T Consensus 203 ~g~~ 206 (296)
T 3e5z_A 203 RGET 206 (296)
T ss_dssp SSCE
T ss_pred CCcC
Confidence 4544
No 178
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.03 E-value=9.4e-09 Score=94.80 Aligned_cols=149 Identities=11% Similarity=-0.041 Sum_probs=96.6
Q ss_pred eEEEEECCCCCEEEEEeCCCc----------------EEEEEcCCCeEEe-eeeeccCCCcceEEEEECCCCCEEEEEeC
Q 023642 127 AYVSQFSADGSLFVAGFQASQ----------------IRIYDVERGWKIQ-KDILAKSLRWTVTDTSLSPDQRHLVYASM 189 (279)
Q Consensus 127 V~~~~~spd~~~l~s~~~d~~----------------i~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~ 189 (279)
+..++|+|||+.|+.++.++. |++|++.++.... .......+...+..+.|+|||++|+..+.
T Consensus 173 ~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~ 252 (710)
T 2xdw_A 173 FSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIR 252 (710)
T ss_dssp SCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEE
T ss_pred cceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEE
Confidence 678999999999999888765 9999998875211 11122334556889999999999887764
Q ss_pred -----CCeEEEEECCC------C--ceeeeeccccccc--------eeEEeeCCC------------C----------Cc
Q 023642 190 -----SPIVHIVDVGS------G--TMESLANVTEIHD--------GLDFSAADD------------G----------GY 226 (279)
Q Consensus 190 -----d~~i~i~d~~~------~--~~~~~~~~~~~~~--------~~~~~~~~~------------~----------~~ 226 (279)
+..+++||+.+ + ....+........ .+.+....+ . .|
T Consensus 253 ~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~ 332 (710)
T 2xdw_A 253 EGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPE 332 (710)
T ss_dssp CSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECC
T ss_pred ccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCC
Confidence 56899999976 4 2222221111100 011111100 0 11
Q ss_pred c--ccEEEEEEecCCCEEEEecCCC--eEEEEECCCCeEEEEEeCCCcceeEE
Q 023642 227 S--FGIFSLKFSTDGRELVAGSSDD--CIYVYDLEANKLSLRILAHTVNIALW 275 (279)
Q Consensus 227 ~--~~v~~~~~sp~g~~l~t~s~d~--~i~vwd~~~~~~~~~~~~h~~~v~~v 275 (279)
. ..+..++|++++.++++...++ .|++||+.+|+.+..+..+...|..+
T Consensus 333 ~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~ 385 (710)
T 2xdw_A 333 HEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGY 385 (710)
T ss_dssp CSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEE
T ss_pred CCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEE
Confidence 1 2567788987777888888787 47778887788888888776555544
No 179
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.02 E-value=1.9e-08 Score=82.01 Aligned_cols=151 Identities=9% Similarity=-0.004 Sum_probs=107.1
Q ss_pred ccccceEeeeeecCCCCceeeCCC-CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 101 AADCCHMLSRYLPVNGPWPVDQTT-SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~~~~~l~~h~-~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
+.+..+.+|+..+.+..+.+..+. ..+.+++++|+|++|+ +.++.|..||. +++.+..... .....+.++.+.|
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~--~~~~~~~~~~~~~ 86 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAA--PAGCEMQTARILP 86 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEEC--CTTCEEEEEEECT
T ss_pred CCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcC--CCCccccccEECC
Confidence 345666666654555555666655 5788999999999988 45678999999 7877766432 2234688999999
Q ss_pred CCCEEEEEeC-CCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCC
Q 023642 180 DQRHLVYASM-SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA 258 (279)
Q Consensus 180 ~~~~l~~~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~ 258 (279)
+|+++++.+. ++.+..+|. +|+........... .++......+++.++|+++++...++.|..||..
T Consensus 87 dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~----------~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~- 154 (276)
T 3no2_A 87 DGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGI----------ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN- 154 (276)
T ss_dssp TSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSC----------SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCC----------CcccccccCceECCCCCEEEEecCCCEEEEECCC-
Confidence 9999999887 778888886 55543222211000 0111234556789999999999999999999998
Q ss_pred CeEEEEEeCC
Q 023642 259 NKLSLRILAH 268 (279)
Q Consensus 259 ~~~~~~~~~h 268 (279)
|+.+-++..+
T Consensus 155 G~~~w~~~~~ 164 (276)
T 3no2_A 155 GQLLNSVKLS 164 (276)
T ss_dssp SCEEEEEECS
T ss_pred CCEEEEEECC
Confidence 9999888764
No 180
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.00 E-value=3.1e-08 Score=82.44 Aligned_cols=126 Identities=11% Similarity=0.071 Sum_probs=92.5
Q ss_pred eeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC----CeEE
Q 023642 119 PVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS----PIVH 194 (279)
Q Consensus 119 ~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d----~~i~ 194 (279)
.+..+...+.+++|+|++++++++..++.|.+||..+++..... ..+...+.+++++|+|+++++...+ +.|.
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~ 115 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPF---VSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIF 115 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEE---ECSSSSEEEEEECTTSCEEEEECTTSSSCCEEE
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEe---eCCCCCcceEEECCCCcEEEEeCCCCCCCceEE
Confidence 45667778899999999998888888999999999887543321 1344579999999999988887766 6899
Q ss_pred EEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC------CCeEEEEECCCCeE
Q 023642 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKL 261 (279)
Q Consensus 195 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~------d~~i~vwd~~~~~~ 261 (279)
+||..++.......... ....+.+++++|+|+++++... .+.|..+|..+++.
T Consensus 116 ~~d~~~~~~~~~~~~~~--------------~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~ 174 (333)
T 2dg1_A 116 AATENGDNLQDIIEDLS--------------TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTV 174 (333)
T ss_dssp EECTTSCSCEEEECSSS--------------SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCE
T ss_pred EEeCCCCEEEEEEccCc--------------cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEE
Confidence 99998876542211000 1236889999999998877654 35677777665544
No 181
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.00 E-value=3.7e-09 Score=97.96 Aligned_cols=135 Identities=15% Similarity=0.150 Sum_probs=90.0
Q ss_pred CCCCeEEEEECCCCCEEEEEeCC-----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCe-----
Q 023642 123 TTSRAYVSQFSADGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI----- 192 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~----- 192 (279)
|...+..++|||||++|+.+..+ ..|++||+.+++.+.... +...+..++|+|| +.|+.++.++.
T Consensus 161 ~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~----~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 161 GATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL----KWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp --EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE----EEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred CCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC----CCceeccEEEECC-CEEEEEEecCcccccc
Confidence 44468899999999999877554 369999999997654311 1112357899999 99988886553
Q ss_pred ---------EEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC-----CeEEEEECCC
Q 023642 193 ---------VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEA 258 (279)
Q Consensus 193 ---------i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d-----~~i~vwd~~~ 258 (279)
|++|++.++...... .+... .+...+..+.|||||++|+..+.+ ..|++||+.+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~l---------v~~~~---~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~ 303 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQP---------VFATP---ELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTN 303 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEE---------EECCT---TCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEET
T ss_pred cccCCCCCEEEEEECCCCchhCEE---------EeccC---CCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCC
Confidence 889998776531111 11111 122357899999999998876643 3899999987
Q ss_pred C--eEEEEEeCCCcceeE
Q 023642 259 N--KLSLRILAHTVNIAL 274 (279)
Q Consensus 259 ~--~~~~~~~~h~~~v~~ 274 (279)
+ ++...+..+...+..
T Consensus 304 ~~~~~~~~l~~~~~~~~~ 321 (741)
T 1yr2_A 304 GKIGPVTALIPDLKAQWD 321 (741)
T ss_dssp TEECCCEEEECSSSSCEE
T ss_pred CCCcccEEecCCCCceEE
Confidence 7 314556555544433
No 182
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.97 E-value=1.1e-08 Score=85.68 Aligned_cols=99 Identities=17% Similarity=0.151 Sum_probs=71.7
Q ss_pred CCeEEEEECCCCCEEEEEeCC---C--cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC---------
Q 023642 125 SRAYVSQFSADGSLFVAGFQA---S--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS--------- 190 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d---~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--------- 190 (279)
..+..++|||||++|+.++.+ + .|.+||+.+++.... ..+.. +..++|+|||+.|+.++.+
T Consensus 59 ~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l----~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~ 133 (347)
T 2gop_A 59 ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKI----LEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIF 133 (347)
T ss_dssp ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEE----EEESE-EEEEEECTTSSEEEEEEECCCC------
T ss_pred ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEE----EcCCC-ccceeECCCCCEEEEEEccCCCcCCcEE
Confidence 568889999999999887654 2 488889988865432 12223 8999999999998887632
Q ss_pred ------------------CeEEEEECCCCce-eeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC
Q 023642 191 ------------------PIVHIVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD 248 (279)
Q Consensus 191 ------------------~~i~i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d 248 (279)
..|++||+.+++. ..+.. . .+..+.|+||| +++++..+
T Consensus 134 ~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~-----------~--------~~~~~~~spdg-~~~~~~~~ 190 (347)
T 2gop_A 134 EDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK-----------P--------RFSSGIWHRDK-IVVNVPHR 190 (347)
T ss_dssp ---CCCC---------CEEEEEEEETTTTEEEEEEEE-----------E--------TTCEEEEETTE-EEEEEECC
T ss_pred EcccceeecCcccccCccceEEEEECCCCeEEeeecC-----------C--------CcccccCCCCe-EEEEEecc
Confidence 5789999988875 32211 0 35678999999 77777543
No 183
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.97 E-value=2.1e-08 Score=83.90 Aligned_cols=115 Identities=15% Similarity=0.207 Sum_probs=83.6
Q ss_pred CCeEEEEECCCCCEEEEEe---------CCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC---C-
Q 023642 125 SRAYVSQFSADGSLFVAGF---------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS---P- 191 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~---------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d---~- 191 (279)
..+..+++ ||++++... .++.|.+||+.+++... + ..+..++|+|||++|+..+.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~----l----~~~~~~~~SpDg~~la~~~~~~~~~~ 84 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRF----I----ENATMPRISPDGKKIAFMRANEEKKV 84 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEE----E----ESCEEEEECTTSSEEEEEEEETTTTE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEE----c----ccCCCeEECCCCCEEEEEEeccCCCc
Confidence 45677778 888887642 25689999999885422 1 358899999999999887753 3
Q ss_pred -eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC----------------------
Q 023642 192 -IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD---------------------- 248 (279)
Q Consensus 192 -~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d---------------------- 248 (279)
.|.+||+.+++...+.. +.. +..++|+|||+.|+.++.+
T Consensus 85 ~~l~~~~~~~g~~~~l~~-----------------~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 146 (347)
T 2gop_A 85 SEIWVADLETLSSKKILE-----------------AKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGF 146 (347)
T ss_dssp EEEEEEETTTTEEEEEEE-----------------ESE-EEEEEECTTSSEEEEEEECCCC---------CCCC------
T ss_pred ceEEEEECCCCceEEEEc-----------------CCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCccc
Confidence 48888998877644322 112 7889999999998887632
Q ss_pred -----CeEEEEECCCCeEEEEEeC
Q 023642 249 -----DCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 249 -----~~i~vwd~~~~~~~~~~~~ 267 (279)
..|++||+.+++.+..+..
T Consensus 147 ~~~~~~~l~~~d~~~~~~~~~l~~ 170 (347)
T 2gop_A 147 FDGEKTTFWIFDTESEEVIEEFEK 170 (347)
T ss_dssp ---CEEEEEEEETTTTEEEEEEEE
T ss_pred ccCccceEEEEECCCCeEEeeecC
Confidence 5799999999887455543
No 184
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.96 E-value=1.2e-07 Score=84.97 Aligned_cols=160 Identities=12% Similarity=0.020 Sum_probs=103.7
Q ss_pred ccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcC--CCeEEeeeeeccCCCcceEEEEEC--
Q 023642 103 DCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVE--RGWKIQKDILAKSLRWTVTDTSLS-- 178 (279)
Q Consensus 103 d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~--~~~~~~~~~~~~~~~~~v~~~~~s-- 178 (279)
+..+.+++.........+. ....+..+.|+|||+++++++.|+.|.+||+. +++.+..+.. ......++|+
T Consensus 176 ~~~V~viD~~t~~v~~~i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~----G~~P~~ia~s~~ 250 (567)
T 1qks_A 176 AGQIALIDGSTYEIKTVLD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI----GSEARSIETSKM 250 (567)
T ss_dssp TTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC----CSEEEEEEECCS
T ss_pred CCeEEEEECCCCeEEEEEe-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec----CCCCceeEEccc
Confidence 4455555543332222233 23356789999999999999999999999996 6655554321 2246789999
Q ss_pred --CCCCEEEEEe-CCCeEEEEECCCCceeeeeccccc------------cceeEEeeCCC--------CC----------
Q 023642 179 --PDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEI------------HDGLDFSAADD--------GG---------- 225 (279)
Q Consensus 179 --p~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~------------~~~~~~~~~~~--------~~---------- 225 (279)
|||+++++++ .++++.++|..+.+.......... ...+..+.... .+
T Consensus 251 ~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~ 330 (567)
T 1qks_A 251 EGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDL 330 (567)
T ss_dssp TTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCS
T ss_pred cCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCC
Confidence 7999987766 558999999988876544332110 00011110000 00
Q ss_pred ---------ccccEEEEEEecCCCEEEEec-CCCeEEEEECCCCeEEEEEeC
Q 023642 226 ---------YSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 226 ---------~~~~v~~~~~sp~g~~l~t~s-~d~~i~vwd~~~~~~~~~~~~ 267 (279)
.......+.|+|+|++|+++. .++.|.++|+.+++.+..+..
T Consensus 331 ~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~v 382 (567)
T 1qks_A 331 NNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDT 382 (567)
T ss_dssp SEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEEC
T ss_pred ccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEec
Confidence 011344678999999987655 578999999999998887764
No 185
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.96 E-value=1.5e-09 Score=92.36 Aligned_cols=140 Identities=14% Similarity=0.072 Sum_probs=87.9
Q ss_pred eEEEEECCCCCEEEEEeCC---CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 023642 127 AYVSQFSADGSLFVAGFQA---SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (279)
Q Consensus 127 V~~~~~spd~~~l~s~~~d---~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~ 203 (279)
+..++|||||++|+....+ ..|.+||+.+++.... ...+......+.|+|||++|+..+.++.+++||+.+++.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l---~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~ 114 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQL---TEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEE 114 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEEC---CCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCE
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEe---ecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCc
Confidence 6778999999998877543 4788899998864332 122222233478999999999999999999999998876
Q ss_pred eeeeccccccceeEEeeCCC------CCcc--ccEEEEEEecCCCEEEEe-----cCCCeEEEEECCCCeEEEEEeCCCc
Q 023642 204 ESLANVTEIHDGLDFSAADD------GGYS--FGIFSLKFSTDGRELVAG-----SSDDCIYVYDLEANKLSLRILAHTV 270 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~------~~~~--~~v~~~~~sp~g~~l~t~-----s~d~~i~vwd~~~~~~~~~~~~h~~ 270 (279)
..+...... +.+.+. .... .....+.|+|+++.++.. ..+..|++||+.+++...... +..
T Consensus 115 ~~~~~~~~~-----~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~-~~~ 188 (396)
T 3c5m_A 115 QVIYTVDEE-----WKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQ-DTA 188 (396)
T ss_dssp EEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEE-ESS
T ss_pred EEEEecccc-----cCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeecc-CCc
Confidence 544332111 100000 0000 000013578888877654 356689999999887655443 444
Q ss_pred ceeEE
Q 023642 271 NIALW 275 (279)
Q Consensus 271 ~v~~v 275 (279)
.+..+
T Consensus 189 ~~~~~ 193 (396)
T 3c5m_A 189 WLGHP 193 (396)
T ss_dssp CEEEE
T ss_pred ccccc
Confidence 44443
No 186
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.95 E-value=2.4e-07 Score=77.00 Aligned_cols=145 Identities=16% Similarity=0.097 Sum_probs=91.0
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCC----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC------CC
Q 023642 122 QTTSRAYVSQFSADGSLFVAGFQA----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM------SP 191 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~------d~ 191 (279)
.+...+.+++|+|+++++++...+ +.|.+||..++..... .........+.+++++|+|+++++... .+
T Consensus 84 ~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 162 (333)
T 2dg1_A 84 SHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDI-IEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLG 162 (333)
T ss_dssp CSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEE-ECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCE
T ss_pred CCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEE-EccCccCCcccceEECCCCCEEEEeccccccCCCc
Confidence 567889999999999988887766 6899999987754321 111123456899999999988877654 35
Q ss_pred eEEEEECCCCceeeeeccccccceeEEeeCCC-------------------CCc---------------cccEEEEEEec
Q 023642 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADD-------------------GGY---------------SFGIFSLKFST 237 (279)
Q Consensus 192 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~~---------------~~~v~~~~~sp 237 (279)
.|..+|..+++...+........++.+.+++. .+. ...+..+++++
T Consensus 163 ~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~ 242 (333)
T 2dg1_A 163 GVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDS 242 (333)
T ss_dssp EEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBT
T ss_pred eEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECC
Confidence 67777766554432211000000111111000 000 02466788888
Q ss_pred CCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 238 DGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 238 ~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
+|+++++...++.|.+||. .++.+..+..+
T Consensus 243 ~G~l~v~~~~~~~v~~~d~-~g~~~~~~~~~ 272 (333)
T 2dg1_A 243 DDNLYVAMYGQGRVLVFNK-RGYPIGQILIP 272 (333)
T ss_dssp TCCEEEEEETTTEEEEECT-TSCEEEEEECT
T ss_pred CCCEEEEEcCCCEEEEECC-CCCEEEEEEcC
Confidence 8888777767788999988 46677777644
No 187
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.95 E-value=7.1e-08 Score=78.58 Aligned_cols=156 Identities=17% Similarity=0.180 Sum_probs=107.4
Q ss_pred cCCCCee-eccccceEeeeeecCCCCceeeCC-CCCeEEEEECCCCCEEEEEeC-CCcEEEEEcCCCeEEeeeeecc---
Q 023642 93 YSGRGRF-SAADCCHMLSRYLPVNGPWPVDQT-TSRAYVSQFSADGSLFVAGFQ-ASQIRIYDVERGWKIQKDILAK--- 166 (279)
Q Consensus 93 ~~~~~~~-~~~d~~~~~~~~~~~~~~~~l~~h-~~~V~~~~~spd~~~l~s~~~-d~~i~iwd~~~~~~~~~~~~~~--- 166 (279)
+.++|.+ .+.+..+..++. .....+.+..+ ...+.++.+.|+|+.+++.+. +++|..+|. +|+.+.......
T Consensus 44 ~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~ 121 (276)
T 3no2_A 44 ATKAGEILFSYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE 121 (276)
T ss_dssp ECTTSCEEEECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCS
T ss_pred ECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC
Confidence 3444443 233334444443 33333445544 357889999999999999887 778888876 565555432211
Q ss_pred CCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec
Q 023642 167 SLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (279)
Q Consensus 167 ~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s 246 (279)
.+......+++.++|+++++...++.|..||.. |+........ ..+.++.+.++|..+++++
T Consensus 122 ~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-----------------~~~~~~~~~~~g~~~v~~~ 183 (276)
T 3no2_A 122 RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLS-----------------GTPFSSAFLDNGDCLVACG 183 (276)
T ss_dssp SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECS-----------------SCCCEEEECTTSCEEEECB
T ss_pred cccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECC-----------------CCccceeEcCCCCEEEEeC
Confidence 122345667889999999999999999999998 7764332211 1455677889999999988
Q ss_pred CCCeEEEEECCCCeEEEEEeCC
Q 023642 247 SDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 247 ~d~~i~vwd~~~~~~~~~~~~h 268 (279)
.++.|..+|..+|+.+-++..+
T Consensus 184 ~~~~v~~~d~~tG~~~w~~~~~ 205 (276)
T 3no2_A 184 DAHCFVQLNLESNRIVRRVNAN 205 (276)
T ss_dssp TTSEEEEECTTTCCEEEEEEGG
T ss_pred CCCeEEEEeCcCCcEEEEecCC
Confidence 8889999999999999888743
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.95 E-value=2.7e-08 Score=91.58 Aligned_cols=149 Identities=12% Similarity=-0.006 Sum_probs=93.6
Q ss_pred ccCCCCeeec--------cccceEeeeeecCCCCceeeCCCCCe--EEEEECCCCCEEEEEeCCCc-------------E
Q 023642 92 NYSGRGRFSA--------ADCCHMLSRYLPVNGPWPVDQTTSRA--YVSQFSADGSLFVAGFQASQ-------------I 148 (279)
Q Consensus 92 ~~~~~~~~~~--------~d~~~~~~~~~~~~~~~~l~~h~~~V--~~~~~spd~~~l~s~~~d~~-------------i 148 (279)
.++++|++.. .+..+.+|++...... ...+...+ ..++|+|||+.|+.++.|.. |
T Consensus 127 ~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~--~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v 204 (695)
T 2bkl_A 127 AVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWS--KVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTI 204 (695)
T ss_dssp EECTTSSEEEEEEEETTCSCCEEEEEETTTCCBC--SSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEE
T ss_pred EECCCCCEEEEEECCCCCceEEEEEEECCCCCCc--CCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEE
Confidence 4678877522 1245666665443321 02222223 68999999999999988776 9
Q ss_pred EEEEcCCCeEE-eeeeeccCCCcceEEEEECCCCCEEEEEeCCC----eEEEEECCCCceeeeeccccccceeEEeeCCC
Q 023642 149 RIYDVERGWKI-QKDILAKSLRWTVTDTSLSPDQRHLVYASMSP----IVHIVDVGSGTMESLANVTEIHDGLDFSAADD 223 (279)
Q Consensus 149 ~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (279)
++|++.++... ..+.....+...+..+.|+|||++|+..+.++ .|++||..++....+..
T Consensus 205 ~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~--------------- 269 (695)
T 2bkl_A 205 RYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVK--------------- 269 (695)
T ss_dssp EEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEE---------------
T ss_pred EEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeec---------------
Confidence 99999987521 11122334555788999999999998877665 67777765555433221
Q ss_pred CCccccEEEEEEecCCCEEEEec---CCCeEEEEECCCCe
Q 023642 224 GGYSFGIFSLKFSTDGRELVAGS---SDDCIYVYDLEANK 260 (279)
Q Consensus 224 ~~~~~~v~~~~~sp~g~~l~t~s---~d~~i~vwd~~~~~ 260 (279)
+...+....+ ++|.+++... .++.|.+||+.+++
T Consensus 270 --~~~~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 270 --GVGAKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp --CSSCCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred --CCCceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 1113445555 5666444443 25789999998765
No 189
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.92 E-value=5e-08 Score=82.61 Aligned_cols=126 Identities=9% Similarity=-0.070 Sum_probs=86.8
Q ss_pred EECCCCCEEEEEeCCCcEEEEEcCCCeEE-eeeeeccC-----C---CcceEEEEECCCCCEEEEEeC-----------C
Q 023642 131 QFSADGSLFVAGFQASQIRIYDVERGWKI-QKDILAKS-----L---RWTVTDTSLSPDQRHLVYASM-----------S 190 (279)
Q Consensus 131 ~~spd~~~l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~-----~---~~~v~~~~~sp~~~~l~~~~~-----------d 190 (279)
.++|++..++..+.++.|.++|+...... ........ . ......++|+|+++.++.+.. .
T Consensus 206 ~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~ 285 (361)
T 2oiz_A 206 APALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPA 285 (361)
T ss_dssp CCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCC
T ss_pred EecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCC
Confidence 34577777877888899999998754321 11100000 0 011223789999888776543 3
Q ss_pred CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC--eEEEEEeCC
Q 023642 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN--KLSLRILAH 268 (279)
Q Consensus 191 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~--~~~~~~~~h 268 (279)
..|.+||+.+++....... +. +.+++|+|||++|++++. ++|.+||..++ +.+.++..+
T Consensus 286 ~~v~viD~~t~~~v~~i~~----------------~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i~~~ 346 (361)
T 2oiz_A 286 AEIWVMDTKTKQRVARIPG----------------RD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTIEGA 346 (361)
T ss_dssp SEEEEEETTTTEEEEEEEC----------------TT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEETTS
T ss_pred ceEEEEECCCCcEEEEEec----------------CC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEeccC
Confidence 5899999999887543321 22 788999999999998887 99999999999 999998655
Q ss_pred CcceeEE
Q 023642 269 TVNIALW 275 (279)
Q Consensus 269 ~~~v~~v 275 (279)
....+.+
T Consensus 347 G~~P~~~ 353 (361)
T 2oiz_A 347 AEASLQV 353 (361)
T ss_dssp CSSEEEE
T ss_pred CCCcEEE
Confidence 4444444
No 190
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.92 E-value=6.4e-08 Score=79.28 Aligned_cols=140 Identities=8% Similarity=0.017 Sum_probs=96.7
Q ss_pred ceeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEE
Q 023642 118 WPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIV 196 (279)
Q Consensus 118 ~~l~~h~~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~ 196 (279)
..+..+.....+++|+|+++ +++++..++.|..||..++ ... +..+...+.+++++|+|+++++...++.|.+|
T Consensus 21 ~~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~--~~~---~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~ 95 (296)
T 3e5z_A 21 RRLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ--LSP---EMHPSHHQNGHCLNKQGHLIACSHGLRRLERQ 95 (296)
T ss_dssp EEEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC--EEE---EESSCSSEEEEEECTTCCEEEEETTTTEEEEE
T ss_pred EEEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC--eEE---EECCCCCcceeeECCCCcEEEEecCCCeEEEE
Confidence 44666677889999999998 7788888999999999987 222 22345578999999999988887778899999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEE----ec-------------CCCeEEEEECCCC
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA----GS-------------SDDCIYVYDLEAN 259 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t----~s-------------~d~~i~vwd~~~~ 259 (279)
|..+++...+....... ....+..++++|+|+++++ ++ ..+.|..++.. +
T Consensus 96 d~~~g~~~~~~~~~~~~------------~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g 162 (296)
T 3e5z_A 96 REPGGEWESIADSFEGK------------KLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-G 162 (296)
T ss_dssp CSTTCCEEEEECEETTE------------ECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-S
T ss_pred cCCCCcEEEEeeccCCC------------CCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-C
Confidence 99888764332211000 1124678999999998887 33 13456666655 4
Q ss_pred eEEEEEeCCCcceeEEE
Q 023642 260 KLSLRILAHTVNIALWI 276 (279)
Q Consensus 260 ~~~~~~~~h~~~v~~v~ 276 (279)
+ +..+..+....+.+.
T Consensus 163 ~-~~~~~~~~~~~~gi~ 178 (296)
T 3e5z_A 163 T-LSAPIRDRVKPNGLA 178 (296)
T ss_dssp C-EEEEECCCSSEEEEE
T ss_pred C-EEEeecCCCCCccEE
Confidence 4 334444444445443
No 191
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.90 E-value=1.8e-08 Score=85.51 Aligned_cols=141 Identities=13% Similarity=0.094 Sum_probs=92.3
Q ss_pred ceEeeeeecCCCCceeeCCCCCeEEEEECC-CCCEEEEEeCC------CcEEEEEcCCCeEEeeeeeccCC-CcceEEEE
Q 023642 105 CHMLSRYLPVNGPWPVDQTTSRAYVSQFSA-DGSLFVAGFQA------SQIRIYDVERGWKIQKDILAKSL-RWTVTDTS 176 (279)
Q Consensus 105 ~~~~~~~~~~~~~~~l~~h~~~V~~~~~sp-d~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~-~~~v~~~~ 176 (279)
.+.+|++... ....+..+...+..+.|+| +++.|+..+.+ ..|.+||+..+..... .... ...+..++
T Consensus 169 ~l~~~d~~~g-~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~~~~~~~~~~~~~ 244 (396)
T 3c5m_A 169 RLIKVDIETG-ELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKI---KEHAEGESCTHEF 244 (396)
T ss_dssp EEEEEETTTC-CEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEES---SCCCTTEEEEEEE
T ss_pred eEEEEECCCC-cEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEe---eccCCCccccceE
Confidence 4444444322 2233556778899999999 88877766543 4688899876643221 1111 33588899
Q ss_pred ECCCCCEEEEEeCC-----CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEec-CCCEEEEec----
Q 023642 177 LSPDQRHLVYASMS-----PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGS---- 246 (279)
Q Consensus 177 ~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~t~s---- 246 (279)
|+|||++|+..+.+ +.|++||+.+++...+.... ... +.|+| ||+++++++
T Consensus 245 ~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~------------------~~~-~~~s~~dg~~l~~~~~~~p 305 (396)
T 3c5m_A 245 WIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMP------------------PCS-HLMSNFDGSLMVGDGCDAP 305 (396)
T ss_dssp ECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECC------------------SEE-EEEECSSSSEEEEEECCC-
T ss_pred ECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCC------------------CCC-CCccCCCCceEEEecCCcc
Confidence 99999988776543 45999999988764332110 122 88999 999888754
Q ss_pred ------------CCCeEEEEECCCCeEEEEEeCCC
Q 023642 247 ------------SDDCIYVYDLEANKLSLRILAHT 269 (279)
Q Consensus 247 ------------~d~~i~vwd~~~~~~~~~~~~h~ 269 (279)
.+..|++||+.+++. ..+..+.
T Consensus 306 ~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~ 339 (396)
T 3c5m_A 306 VDVADADSYNIENDPFLYVLNTKAKSA-QKLCKHS 339 (396)
T ss_dssp ---------CCCCCCEEEEEETTTTBC-CEEEECC
T ss_pred eeeccccccccCCCCcEEEEecccCce-EEccCCC
Confidence 346899999988764 3444443
No 192
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.84 E-value=2.4e-06 Score=70.06 Aligned_cols=155 Identities=9% Similarity=0.017 Sum_probs=94.7
Q ss_pred eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc-CCCcceEEEEECCCCCEEEEEeCC---------
Q 023642 121 DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-SLRWTVTDTSLSPDQRHLVYASMS--------- 190 (279)
Q Consensus 121 ~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d--------- 190 (279)
......+.+++++|+|+++++. +..|.+||..+++......... .....+.+++++|+|+++++....
T Consensus 50 ~~~~~~~~~i~~~~dG~l~v~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~ 127 (297)
T 3g4e_A 50 VTMDAPVSSVALRQSGGYVATI--GTKFCALNWKEQSAVVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLER 127 (297)
T ss_dssp EECSSCEEEEEEBTTSSEEEEE--TTEEEEEETTTTEEEEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCT
T ss_pred EeCCCceEEEEECCCCCEEEEE--CCeEEEEECCCCcEEEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccC
Confidence 3456789999999999965554 5689999998875432211111 122358899999999977754321
Q ss_pred CeEEEEECCC-CceeeeeccccccceeEEeeCCC--------------------C-------------CccccEEEEEEe
Q 023642 191 PIVHIVDVGS-GTMESLANVTEIHDGLDFSAADD--------------------G-------------GYSFGIFSLKFS 236 (279)
Q Consensus 191 ~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~--------------------~-------------~~~~~v~~~~~s 236 (279)
....||.+.. +.............++.+.+++. . .+......++++
T Consensus 128 ~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d 207 (297)
T 3g4e_A 128 HQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCID 207 (297)
T ss_dssp TCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEB
T ss_pred CCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEEC
Confidence 2234444332 23221111111112222222211 0 012346778889
Q ss_pred cCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEEe
Q 023642 237 TDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWIT 277 (279)
Q Consensus 237 p~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~~ 277 (279)
++|++.++...++.|..||..+++.+..+..+...++++..
T Consensus 208 ~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f 248 (297)
T 3g4e_A 208 AEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCF 248 (297)
T ss_dssp TTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEE
T ss_pred CCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEE
Confidence 99988777777788999999999999999877666776653
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.82 E-value=1e-07 Score=85.44 Aligned_cols=112 Identities=17% Similarity=0.007 Sum_probs=86.7
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECC--CCceeeeecccc
Q 023642 134 ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG--SGTMESLANVTE 211 (279)
Q Consensus 134 pd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~--~~~~~~~~~~~~ 211 (279)
|.+.++++...+++|.++|..+++.+..+. ....+..+.|+|||+++++++.|+.|.+||+. +++.......
T Consensus 165 ~~~~~~V~~~~~~~V~viD~~t~~v~~~i~----~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~-- 238 (567)
T 1qks_A 165 LENLFSVTLRDAGQIALIDGSTYEIKTVLD----TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKI-- 238 (567)
T ss_dssp GGGEEEEEETTTTEEEEEETTTCCEEEEEE----CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEEC--
T ss_pred CCceEEEEeCCCCeEEEEECCCCeEEEEEe----CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEec--
Confidence 445567777889999999999997766532 22246789999999999999999999999996 5554322111
Q ss_pred ccceeEEeeCCCCCccccEEEEEEe----cCCCEEEEecC-CCeEEEEECCCCeEEEEEe
Q 023642 212 IHDGLDFSAADDGGYSFGIFSLKFS----TDGRELVAGSS-DDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 212 ~~~~~~~~~~~~~~~~~~v~~~~~s----p~g~~l~t~s~-d~~i~vwd~~~~~~~~~~~ 266 (279)
. .....++|+ |||++++++.. +++|.|+|..+.+.++++.
T Consensus 239 G---------------~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~ 283 (567)
T 1qks_A 239 G---------------SEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQS 283 (567)
T ss_dssp C---------------SEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEE
T ss_pred C---------------CCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEe
Confidence 0 145789999 79999887775 6899999999999998876
No 194
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.81 E-value=1.2e-07 Score=79.04 Aligned_cols=123 Identities=11% Similarity=0.057 Sum_probs=88.9
Q ss_pred CeEEEEECCCCCEEEEEeCC----------CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEE
Q 023642 126 RAYVSQFSADGSLFVAGFQA----------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHI 195 (279)
Q Consensus 126 ~V~~~~~spd~~~l~s~~~d----------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i 195 (279)
....++++|+|++++++..+ +.|.+||..+++...... . ........++|+|+++.|+.+.. .|.+
T Consensus 173 ~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~-~-~~g~~p~~la~~~d~~~lyv~~~--~v~~ 248 (328)
T 3dsm_A 173 QPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK-F-KLGDWPSEVQLNGTRDTLYWINN--DIWR 248 (328)
T ss_dssp CBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE-C-CTTCCCEEEEECTTSCEEEEESS--SEEE
T ss_pred CccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe-c-CCCCCceeEEEecCCCEEEEEcc--EEEE
Confidence 35678999999987777654 789999999886554422 1 11235889999999999888765 8999
Q ss_pred EECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEec-CCCEEEEe----cCCCeEEEEECCCCeEEEEEeC
Q 023642 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAG----SSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~t~----s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
||..+++......... .......++++| ++..+++. ..++.|.+||.. ++.+.+++.
T Consensus 249 ~d~~t~~~~~~~~~~~--------------~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~~ 310 (328)
T 3dsm_A 249 MPVEADRVPVRPFLEF--------------RDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFYV 310 (328)
T ss_dssp EETTCSSCCSSCSBCC--------------CSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEEE
T ss_pred EECCCCceeeeeeecC--------------CCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEEe
Confidence 9998877531110000 012678999999 56666666 568899999998 898888864
No 195
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.80 E-value=6.7e-08 Score=82.20 Aligned_cols=126 Identities=11% Similarity=0.006 Sum_probs=92.5
Q ss_pred eccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECC
Q 023642 100 SAADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSP 179 (279)
Q Consensus 100 ~~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp 179 (279)
.+.++.+.+|+.........+..|...+.++.+.+.. ++++..||.|.+||+..+.... +...|++++|+|
T Consensus 102 v~~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~--~av~~~dG~L~v~dl~~~~~~~-------~~~~Vs~v~WSp 172 (388)
T 1xip_A 102 VSTRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNT--LVILNSVNDLSALDLRTKSTKQ-------LAQNVTSFDVTN 172 (388)
T ss_dssp EEESSEEEEEESSSTTCEEEEEECSSCEEEEEECSSE--EEEEETTSEEEEEETTTCCEEE-------EEESEEEEEECS
T ss_pred EEcCCcEEEEEchhhhccCccceeecceeeEEecCCC--EEEEECCCCEEEEEccCCcccc-------ccCCceEEEEcC
Confidence 3466778888877666556677888889988877643 8889999999999999875432 223699999999
Q ss_pred CCCEEEEEeCCCeEEEEECCCCce--eeee-ccccccceeEEeeCCCCCccccEEEEEEecCCCEEEE
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTM--ESLA-NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA 244 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t 244 (279)
+| ++.+..||.+++|+..++.. .... ..... . ...+|...|.++.|.+++.++++
T Consensus 173 kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~------~--~~~~~~~~V~sI~wl~~~~flv~ 230 (388)
T 1xip_A 173 SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSEL------E--ELPVEEYSPLSVTILSPQDFLAV 230 (388)
T ss_dssp SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHH------H--TSCTTTSEEEEEEESSSSEEEEE
T ss_pred Cc--eEEEEcCCcEEEEcCCCccccccceecCCccc------c--cccCCCeeEEEEEEecCCeEEEE
Confidence 99 77899999999999887774 2111 11000 0 00014468999999999999886
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.78 E-value=2.1e-07 Score=74.76 Aligned_cols=118 Identities=11% Similarity=0.015 Sum_probs=88.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~ 203 (279)
...+.+++++|+|+++++...++.|.+||......... .......+.+++++|+|.++++...++.|.+||..+...
T Consensus 149 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~---~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 149 LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVL---PFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEEC---CCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred CCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEee---cccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 35678899999999878777788999999887643322 112224688999999998777777788999999876543
Q ss_pred eeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCe
Q 023642 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK 260 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~ 260 (279)
..... .+...+.+++++|+|+.+++...++.|+++++...+
T Consensus 226 ~~~~~----------------~~~~~p~~i~~~~~g~l~v~~~~~~~v~~~~~~~~~ 266 (270)
T 1rwi_B 226 TVLPF----------------TGLNTPLAVAVDSDRTVYVADRGNDRVVKLTSLEHH 266 (270)
T ss_dssp EECCC----------------CSCSCEEEEEECTTCCEEEEEGGGTEEEEECCCGGG
T ss_pred eeecc----------------CCCCCceeEEECCCCCEEEEECCCCEEEEEcCCCcc
Confidence 22110 011368899999999988888889999999987543
No 197
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.75 E-value=5.4e-07 Score=72.38 Aligned_cols=119 Identities=8% Similarity=-0.030 Sum_probs=87.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~ 203 (279)
...+..++++|+|+++++...++.|.+|+..+...... .......+.+++++|+|+++++...++.|.+||..+...
T Consensus 107 ~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~---~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~ 183 (270)
T 1rwi_B 107 LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVL---PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQ 183 (270)
T ss_dssp CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEEC---CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCE
T ss_pred cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEee---ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCce
Confidence 36789999999999888877788999997655432211 112223578899999999777777788999999887654
Q ss_pred eeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeE
Q 023642 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~ 261 (279)
...... +...+.+++++++|..+++...++.|.+||..+...
T Consensus 184 ~~~~~~----------------~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~ 225 (270)
T 1rwi_B 184 VVLPFT----------------DITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS 225 (270)
T ss_dssp EECCCS----------------SCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCC
T ss_pred Eeeccc----------------CCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCcc
Confidence 321110 113678999999998887777788999999876543
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.73 E-value=7.7e-07 Score=74.19 Aligned_cols=144 Identities=8% Similarity=-0.044 Sum_probs=94.6
Q ss_pred cceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc--CCCcceEEEEECCCC
Q 023642 104 CCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK--SLRWTVTDTSLSPDQ 181 (279)
Q Consensus 104 ~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~ 181 (279)
+.+.+++.........+. .......++++|+++.+++...++.|.+||..+++......... +.......+++ ++
T Consensus 64 ~~v~viD~~t~~~~~~i~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~--~~ 140 (328)
T 3dsm_A 64 HVIFAIDINTFKEVGRIT-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ--YG 140 (328)
T ss_dssp TEEEEEETTTCCEEEEEE-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--ET
T ss_pred CEEEEEECcccEEEEEcC-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--EC
Confidence 445555544333323343 34678899999998555555488999999999987654432211 01113556777 44
Q ss_pred CEEEEEe--CCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC----------C
Q 023642 182 RHLVYAS--MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD----------D 249 (279)
Q Consensus 182 ~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d----------~ 249 (279)
..|+.++ .++.|.++|..+++........ .....++++|+|++++++..+ +
T Consensus 141 ~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g-----------------~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~ 203 (328)
T 3dsm_A 141 KYVYVNCWSYQNRILKIDTETDKVVDELTIG-----------------IQPTSLVMDKYNKMWTITDGGYEGSPYGYEAP 203 (328)
T ss_dssp TEEEEEECTTCCEEEEEETTTTEEEEEEECS-----------------SCBCCCEECTTSEEEEEBCCBCTTCSSCBCCC
T ss_pred CEEEEEcCCCCCEEEEEECCCCeEEEEEEcC-----------------CCccceEEcCCCCEEEEECCCccCCccccCCc
Confidence 5555444 4889999999998764432211 134568899999988776654 7
Q ss_pred eEEEEECCCCeEEEEEeC
Q 023642 250 CIYVYDLEANKLSLRILA 267 (279)
Q Consensus 250 ~i~vwd~~~~~~~~~~~~ 267 (279)
.|.++|..+++...++..
T Consensus 204 ~v~~id~~t~~v~~~~~~ 221 (328)
T 3dsm_A 204 SLYRIDAETFTVEKQFKF 221 (328)
T ss_dssp EEEEEETTTTEEEEEEEC
T ss_pred eEEEEECCCCeEEEEEec
Confidence 899999999998877753
No 199
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.70 E-value=1.3e-07 Score=86.94 Aligned_cols=135 Identities=19% Similarity=0.243 Sum_probs=88.8
Q ss_pred CCCCCeEEEEECCCCCEEEEEe-----CCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCC-----
Q 023642 122 QTTSRAYVSQFSADGSLFVAGF-----QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP----- 191 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~-----~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~----- 191 (279)
+|...+..++|||||++|+.+. ....|++||+.+++.+.... ... ....++|+ |++.|+.++.+.
T Consensus 126 ~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~--~~~--k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 126 DGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETPL--KDV--KFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEE--EEE--ESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCcccc--CCc--eeccEEEe-CCCEEEEEEecCccccc
Confidence 4566789999999999988542 23579999999997654311 111 13567899 999999888774
Q ss_pred --------eEEEEECCCCceeeeeccccccceeEEeeCCCCC-ccccEEEEEEecCCCEEEEec----CCCeEEEEECCC
Q 023642 192 --------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGG-YSFGIFSLKFSTDGRELVAGS----SDDCIYVYDLEA 258 (279)
Q Consensus 192 --------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~g~~l~t~s----~d~~i~vwd~~~ 258 (279)
.|++|++.++....... +... . |......+.|+|||++|+... .+..|+++|+.+
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v---------~~~~---~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~ 268 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLV---------FGAI---PAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQ 268 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEE---------ESCS---GGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTS
T ss_pred ccccCCCcEEEEEECCCCcccceEE---------EecC---CCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCC
Confidence 49999988765311110 1000 0 122567899999999886432 235899999977
Q ss_pred Ce-EEEEEeCCCccee
Q 023642 259 NK-LSLRILAHTVNIA 273 (279)
Q Consensus 259 ~~-~~~~~~~h~~~v~ 273 (279)
+. ....+..+.....
T Consensus 269 ~~~~~~~l~~~~~~~~ 284 (693)
T 3iuj_A 269 ENAPLLTVQGDLDADV 284 (693)
T ss_dssp TTCCCEEEECSSSSCE
T ss_pred CCCceEEEeCCCCceE
Confidence 63 4455555554443
No 200
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.70 E-value=8.8e-07 Score=82.04 Aligned_cols=128 Identities=16% Similarity=0.100 Sum_probs=82.7
Q ss_pred EEEEECCCCCEEEEEeCCCc--------------EEEEEcCCCeEEe-eeeeccCCCcceEEEEECCCCCEEEEEeCCC-
Q 023642 128 YVSQFSADGSLFVAGFQASQ--------------IRIYDVERGWKIQ-KDILAKSLRWTVTDTSLSPDQRHLVYASMSP- 191 (279)
Q Consensus 128 ~~~~~spd~~~l~s~~~d~~--------------i~iwd~~~~~~~~-~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~- 191 (279)
..++|+|| +.|+.++.++. |++|++.++.... .+.....+...+..+.|+|||++|+..+.++
T Consensus 212 ~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 212 SGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp CCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTT
T ss_pred ccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccC
Confidence 57899999 99988876654 8999998764211 1112233334588999999999988777543
Q ss_pred ----eEEEEECCCC--c-eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC----CCeEEEEECCCC-
Q 023642 192 ----IVHIVDVGSG--T-MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS----DDCIYVYDLEAN- 259 (279)
Q Consensus 192 ----~i~i~d~~~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~----d~~i~vwd~~~~- 259 (279)
.|++||+.++ + ...+.. +...+... ++|+|+.|+..+. +..|.+||+.++
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~~l~~-----------------~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 352 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVTALIP-----------------DLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGST 352 (741)
T ss_dssp CSCCEEEEEEEETTEECCCEEEEC-----------------SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSS
T ss_pred CCcceEEEEECCCCCCcccEEecC-----------------CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCc
Confidence 8999999876 3 222211 11123333 3488988887664 346999999874
Q ss_pred -eEEEEEeCCCcceeE
Q 023642 260 -KLSLRILAHTVNIAL 274 (279)
Q Consensus 260 -~~~~~~~~h~~~v~~ 274 (279)
+....++.+...+..
T Consensus 353 ~~~~~l~~~~~~~l~~ 368 (741)
T 1yr2_A 353 PRFDTVVPESKDNLES 368 (741)
T ss_dssp CEEEEEECCCSSEEEE
T ss_pred cccEEEecCCCCeEEE
Confidence 444445555444433
No 201
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.69 E-value=6.4e-07 Score=75.98 Aligned_cols=123 Identities=15% Similarity=0.064 Sum_probs=88.3
Q ss_pred EECCCCCEEEEEeC-----CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe----------CCCeEEE
Q 023642 131 QFSADGSLFVAGFQ-----ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHI 195 (279)
Q Consensus 131 ~~spd~~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~d~~i~i 195 (279)
...|+++.++.... ++.|.++|..+++.+..+.... .+ .++++|||++++.++ .++.|.+
T Consensus 39 ~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~---~P--~va~spDG~~lyVan~~~~r~~~G~~~~~Vsv 113 (386)
T 3sjl_D 39 APAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGF---LP--NPVVADDGSFIAHASTVFSRIARGERTDYVEV 113 (386)
T ss_dssp CCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECS---SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEE
T ss_pred ccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCC---CC--cEEECCCCCEEEEEcccccccccCCCCCEEEE
Confidence 44688988887765 6799999999998776643322 23 399999999987765 3678999
Q ss_pred EECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC--CCeEEEEECCCCeEEEEEeC
Q 023642 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~--d~~i~vwd~~~~~~~~~~~~ 267 (279)
||..+.+............ .. .-.....+.|+|||++++.+.. ++.|.++|+.+++.+.+++.
T Consensus 114 iD~~t~~v~~~I~v~~g~r---~~------~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 114 FDPVTLLPTADIELPDAPR---FL------VGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp ECTTTCCEEEEEEETTCCC---CC------BSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred EECCCCeEEEEEECCCccc---cc------cCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 9999988754332211000 00 0013456899999999887764 68999999999999998863
No 202
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.60 E-value=3.6e-06 Score=68.98 Aligned_cols=121 Identities=8% Similarity=0.036 Sum_probs=84.3
Q ss_pred CCCCCeEEEEEC----CCCCEEEEE-eCCCcEEEEEcC-CCeEEe--eeeeccCCC-cceEEEEECCCCCEEEEEeCCCe
Q 023642 122 QTTSRAYVSQFS----ADGSLFVAG-FQASQIRIYDVE-RGWKIQ--KDILAKSLR-WTVTDTSLSPDQRHLVYASMSPI 192 (279)
Q Consensus 122 ~h~~~V~~~~~s----pd~~~l~s~-~~d~~i~iwd~~-~~~~~~--~~~~~~~~~-~~v~~~~~sp~~~~l~~~~~d~~ 192 (279)
.+......++|+ |+++.|+.+ ..++.|.+||+. .+.... .......+. ..+..++++++|+++++...++.
T Consensus 169 ~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~ 248 (314)
T 1pjx_A 169 TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSH 248 (314)
T ss_dssp EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTE
T ss_pred cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCE
Confidence 344557889999 999766544 567899999986 453211 111223333 56889999999999888888899
Q ss_pred EEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEE-EEecCCCeEEEEECCC
Q 023642 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEA 258 (279)
Q Consensus 193 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~t~s~d~~i~vwd~~~ 258 (279)
|.+||..+++....... +...+.+++|+|+|+.| ++...++.|..|++..
T Consensus 249 i~~~d~~~g~~~~~~~~----------------~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~ 299 (314)
T 1pjx_A 249 IEVFGPDGGQPKMRIRC----------------PFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQR 299 (314)
T ss_dssp EEEECTTCBSCSEEEEC----------------SSSCEEEEEECTTSSEEEEEETTTTEEEEEECSS
T ss_pred EEEEcCCCCcEeEEEeC----------------CCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCC
Confidence 99999986654222111 12378999999999955 4555678899999874
No 203
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.60 E-value=1e-05 Score=65.60 Aligned_cols=122 Identities=11% Similarity=0.115 Sum_probs=88.7
Q ss_pred eCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCC
Q 023642 121 DQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGS 200 (279)
Q Consensus 121 ~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~ 200 (279)
..+...+.+++++|+|+++++...++.|.+||.. +..... ........+.+++++|+|.++++...++.|..||..
T Consensus 11 ~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~--~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~- 86 (299)
T 2z2n_A 11 TNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEY--PLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK- 86 (299)
T ss_dssp CSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEE--ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-
T ss_pred CCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEe--cCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-
Confidence 3455789999999999988877778899999988 543221 122234568999999999988887778899999986
Q ss_pred CceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEE
Q 023642 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS 262 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~ 262 (279)
+...... .. . ....+..+++.|+|.++++...++.|.+||. +++..
T Consensus 87 g~~~~~~-~~---------~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~ 132 (299)
T 2z2n_A 87 GIIKEYT-LP---------N-----PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR 132 (299)
T ss_dssp SCEEEEE-CS---------S-----TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred CcEEEEe-CC---------C-----cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE
Confidence 3332111 00 0 1126889999999998888777889999998 55443
No 204
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.58 E-value=1.2e-05 Score=65.21 Aligned_cols=133 Identities=8% Similarity=-0.058 Sum_probs=93.0
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCC
Q 023642 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~ 201 (279)
.....+..++++|++.++++...++.|..||. +++.... ........+.+++++|+|+++++...++.|.+||. ++
T Consensus 138 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~--~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g 213 (299)
T 2z2n_A 138 NKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITEF--KIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SG 213 (299)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE--ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TC
T ss_pred CCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEEe--eCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CC
Confidence 34567899999999988887777889999998 6644321 12233446889999999997777767889999999 66
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEE--eCCCcceeEE
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRI--LAHTVNIALW 275 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~--~~h~~~v~~v 275 (279)
........ .+...+.+++++++|+.+++...++.|..||. +++. ..+ ..+...+.++
T Consensus 214 ~~~~~~~~---------------~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~-~~~~~~~~~~~~~~i 272 (299)
T 2z2n_A 214 EITEFKIP---------------TPNARPHAITAGAGIDLWFTEWGANKIGRLTS-NNII-EEYPIQIKSAEPHGI 272 (299)
T ss_dssp CEEEEECS---------------STTCCEEEEEECSTTCEEEEETTTTEEEEEET-TTEE-EEEECSSSSCCEEEE
T ss_pred cEEEEECC---------------CCCCCceeEEECCCCCEEEeccCCceEEEECC-CCce-EEEeCCCCCCccceE
Confidence 54322110 02236889999999997777667789999998 4543 333 3344455544
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.56 E-value=6.4e-06 Score=67.50 Aligned_cols=151 Identities=15% Similarity=0.129 Sum_probs=91.5
Q ss_pred CCCCeEEEEECCC-CCEEEEEeCCCcEEEEEcCCCeEEee-eeeccC-CCcceEEEEECCCCCEEEEEeCC---------
Q 023642 123 TTSRAYVSQFSAD-GSLFVAGFQASQIRIYDVERGWKIQK-DILAKS-LRWTVTDTSLSPDQRHLVYASMS--------- 190 (279)
Q Consensus 123 h~~~V~~~~~spd-~~~l~s~~~d~~i~iwd~~~~~~~~~-~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d--------- 190 (279)
+...+.+++++|+ ++++++.. ...|.+||.. ++.... ...... ....+.+++++|+|+++++...+
T Consensus 69 ~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~ 146 (314)
T 1pjx_A 69 YGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTR 146 (314)
T ss_dssp EECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCB
T ss_pred CCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccc
Confidence 4567899999999 66555544 4589999998 654321 111111 12358899999999988776654
Q ss_pred ------CeEEEEECCCCceeeeeccccccceeEEe----eCC---------C-----------------------CCcc-
Q 023642 191 ------PIVHIVDVGSGTMESLANVTEIHDGLDFS----AAD---------D-----------------------GGYS- 227 (279)
Q Consensus 191 ------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~----~~~---------~-----------------------~~~~- 227 (279)
+.|..||.. ++............++.+. +++ . .++.
T Consensus 147 ~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~ 225 (314)
T 1pjx_A 147 SMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHE 225 (314)
T ss_dssp TTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSS
T ss_pred cccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCC
Confidence 567777765 4332211100000111111 000 0 0111
Q ss_pred ccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEEE
Q 023642 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALWI 276 (279)
Q Consensus 228 ~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v~ 276 (279)
..+..++++++|+++++...++.|.+||..+++.+..+..+...+.++.
T Consensus 226 ~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~ 274 (314)
T 1pjx_A 226 GGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLH 274 (314)
T ss_dssp CEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEE
T ss_pred CCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEE
Confidence 3467788899998888777788999999987777777766655565554
No 206
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.55 E-value=2.9e-06 Score=69.82 Aligned_cols=124 Identities=13% Similarity=-0.028 Sum_probs=83.7
Q ss_pred ceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccC-CCcceEEEEECCCCCEEEE----EeC---
Q 023642 118 WPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS-LRWTVTDTSLSPDQRHLVY----ASM--- 189 (279)
Q Consensus 118 ~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~----~~~--- 189 (279)
..+..+...+..++++|+|+++++...++.|.+|+.+ +..........+ ....+.+++++|+|+++++ +..
T Consensus 79 ~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~ 157 (305)
T 3dr2_A 79 DVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPS 157 (305)
T ss_dssp EEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGG
T ss_pred EEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccc
Confidence 4455667789999999999977776667899999986 533221111111 1124678999999998886 321
Q ss_pred ----------CCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC------CeEEE
Q 023642 190 ----------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD------DCIYV 253 (279)
Q Consensus 190 ----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d------~~i~v 253 (279)
.+.|..||..+++...+. .. .....++|+||++.|+.+... +.|++
T Consensus 158 ~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~-----------------~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~ 219 (305)
T 3dr2_A 158 QGCPADPELAHHSVYRLPPDGSPLQRMA-DL-----------------DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITA 219 (305)
T ss_dssp GSCCCCCSSSCEEEEEECSSSCCCEEEE-EE-----------------SSEEEEEECTTSSEEEEEECCC---CCCEEEE
T ss_pred cccccccccCCCeEEEEcCCCCcEEEEe-cC-----------------CCCcceEEcCCCCEEEEEecCCcCCCCCEEEE
Confidence 246777887666654322 00 146789999999987776554 68999
Q ss_pred EECCCCe
Q 023642 254 YDLEANK 260 (279)
Q Consensus 254 wd~~~~~ 260 (279)
|++..+.
T Consensus 220 ~~~~~~~ 226 (305)
T 3dr2_A 220 FAWRDGA 226 (305)
T ss_dssp EEEETTE
T ss_pred EEecCCC
Confidence 9987654
No 207
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.53 E-value=5e-06 Score=68.10 Aligned_cols=123 Identities=11% Similarity=0.005 Sum_probs=81.8
Q ss_pred EeeeeecCCCCceeeCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEc--CCCeEEe--eeeeccCCCcceEEEEECCCC
Q 023642 107 MLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDV--ERGWKIQ--KDILAKSLRWTVTDTSLSPDQ 181 (279)
Q Consensus 107 ~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l-~s~~~d~~i~iwd~--~~~~~~~--~~~~~~~~~~~v~~~~~sp~~ 181 (279)
.+|.+.+......+..+....+.++|+||++.| ++.+.++.|.+||+ .++.... .......+......+++.++|
T Consensus 131 ~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G 210 (297)
T 3g4e_A 131 ALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEG 210 (297)
T ss_dssp EEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTS
T ss_pred EEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCC
Confidence 445554432222333444567899999999876 45566789999997 4554321 122222334568899999999
Q ss_pred CEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEe-cCCCEEEEe
Q 023642 182 RHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS-TDGRELVAG 245 (279)
Q Consensus 182 ~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s-p~g~~l~t~ 245 (279)
++.++....+.|.+||..+++....... ....+++++|. |+++.|+..
T Consensus 211 ~lwva~~~~~~v~~~d~~tG~~~~~i~~----------------p~~~~t~~~f~g~d~~~L~vt 259 (297)
T 3g4e_A 211 KLWVACYNGGRVIRLDPVTGKRLQTVKL----------------PVDKTTSCCFGGKNYSEMYVT 259 (297)
T ss_dssp CEEEEEETTTEEEEECTTTCCEEEEEEC----------------SSSBEEEEEEESGGGCEEEEE
T ss_pred CEEEEEcCCCEEEEEcCCCceEEEEEEC----------------CCCCceEEEEeCCCCCEEEEE
Confidence 9888888888999999998876443322 11268999998 887765543
No 208
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.52 E-value=2.3e-05 Score=65.13 Aligned_cols=115 Identities=13% Similarity=0.023 Sum_probs=76.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc--CCCcceEEEEECCCCCEEEEEeC------CCeEE
Q 023642 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK--SLRWTVTDTSLSPDQRHLVYASM------SPIVH 194 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~l~~~~~------d~~i~ 194 (279)
....+.+++|+|+|+++++. . ..|.+||..+++.... .... .....+.+++++|+|+++++... .+.|.
T Consensus 88 ~~~~v~~i~~~~dg~l~v~~-~-~gl~~~d~~~g~~~~~-~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~ 164 (326)
T 2ghs_A 88 LPFMGSALAKISDSKQLIAS-D-DGLFLRDTATGVLTLH-AELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIY 164 (326)
T ss_dssp CSSCEEEEEEEETTEEEEEE-T-TEEEEEETTTCCEEEE-ECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEE
T ss_pred CCCcceEEEEeCCCeEEEEE-C-CCEEEEECCCCcEEEE-eeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEE
Confidence 45679999999999877765 4 4599999988754321 1111 11235889999999997766542 24566
Q ss_pred EEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEE-ecCCCeEEEEECC--CC
Q 023642 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA-GSSDDCIYVYDLE--AN 259 (279)
Q Consensus 195 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t-~s~d~~i~vwd~~--~~ 259 (279)
.++ +++...+.. .......++|+|+|+.|+. .+.++.|.+||+. ++
T Consensus 165 ~~~--~g~~~~~~~-----------------~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~G 213 (326)
T 2ghs_A 165 HVA--KGKVTKLFA-----------------DISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 213 (326)
T ss_dssp EEE--TTEEEEEEE-----------------EESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred EEe--CCcEEEeeC-----------------CCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccC
Confidence 666 444322211 1114678999999987654 4557899999986 55
No 209
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.50 E-value=3.9e-06 Score=71.28 Aligned_cols=120 Identities=11% Similarity=-0.011 Sum_probs=82.0
Q ss_pred ECCCCCEEEEEeC--CC---cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe----------CCCeEEEE
Q 023642 132 FSADGSLFVAGFQ--AS---QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHIV 196 (279)
Q Consensus 132 ~spd~~~l~s~~~--d~---~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~d~~i~i~ 196 (279)
..|++++++.... .. .|.+||..+++.+..+.. + ..+ .++++|||++++.+. .++.|.+|
T Consensus 28 ~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~--g-~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~vi 102 (373)
T 2mad_H 28 PGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNG--G-FLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVF 102 (373)
T ss_pred CCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecC--C-CCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEE
Confidence 3467777766653 22 889999999876654221 2 223 899999999998876 36789999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC--CCeEEEEECCCCeEEEE-Ee
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLR-IL 266 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~--d~~i~vwd~~~~~~~~~-~~ 266 (279)
|..+.+........... .+. +......+.|+|||++|+.+.. ++.|.++| .+++.+.+ ++
T Consensus 103 D~~t~~~~~~i~~~~~~---~~~------~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~ 165 (373)
T 2mad_H 103 DPVTFLPIADIELPDAP---RFD------VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLS 165 (373)
T ss_pred ECCCCcEEEEEECCCcc---ccc------cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcC
Confidence 99887764332221000 000 0013457899999999998774 57899999 99998888 64
No 210
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.49 E-value=2.4e-05 Score=67.27 Aligned_cols=138 Identities=11% Similarity=0.088 Sum_probs=90.0
Q ss_pred EEECCCCCEEEEEeCCC--cEEEEEcCCCeEEeeeeeccC-CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeee
Q 023642 130 SQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILAKS-LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESL 206 (279)
Q Consensus 130 ~~~spd~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~ 206 (279)
++|+|+++.|+++..++ .|.+|+...+........... ....+.+++++|++..|+.+..++.|+.||..++.....
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~ 255 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLI 255 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEE
Confidence 99999999998888766 799999876644322211112 344678899999655555577788999999987764332
Q ss_pred ----ecccccc--c-eeEEeeCCC-----------------CC-------c---------------cccEEEEEEecCCC
Q 023642 207 ----ANVTEIH--D-GLDFSAADD-----------------GG-------Y---------------SFGIFSLKFSTDGR 240 (279)
Q Consensus 207 ----~~~~~~~--~-~~~~~~~~~-----------------~~-------~---------------~~~v~~~~~sp~g~ 240 (279)
....... . ++.+.+... .+ + -.....++|+|+|+
T Consensus 256 ~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 256 KQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp EECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred ecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 1000001 1 333433211 00 0 13478899999999
Q ss_pred EEEEec-CCCeEEEEECCCCeEEEEEeCC
Q 023642 241 ELVAGS-SDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 241 ~l~t~s-~d~~i~vwd~~~~~~~~~~~~h 268 (279)
++++-+ .++.|+.|++.++. +.++.++
T Consensus 336 lyvad~~~~~~I~~~~~~~G~-v~~~~g~ 363 (409)
T 3hrp_A 336 FYIVDGFKGYCLRKLDILDGY-VSTVAGQ 363 (409)
T ss_dssp EEEEETTTTCEEEEEETTTTE-EEEEEEC
T ss_pred EEEEeCCCCCEEEEEECCCCE-EEEEeCC
Confidence 888877 78899999987776 4555554
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.45 E-value=2e-05 Score=66.89 Aligned_cols=112 Identities=13% Similarity=0.099 Sum_probs=76.4
Q ss_pred EEEECCCCCEEEEEe----------CCCcEEEEEcCCCeEEeeeeec-cCC---CcceEEEEECCCCCEEEEEeC--CCe
Q 023642 129 VSQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILA-KSL---RWTVTDTSLSPDQRHLVYASM--SPI 192 (279)
Q Consensus 129 ~~~~spd~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~-~~~---~~~v~~~~~sp~~~~l~~~~~--d~~ 192 (279)
.+++||||++++.+. .++.|.+||..+.+.+...... ... ......++|+|||++|+.++. ++.
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~ 149 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPA 149 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCe
Confidence 899999999998875 3678999999987665543221 010 123568999999999998874 578
Q ss_pred EEEEECCCCceeee-eccccccceeEEeeCCCCCccccEEEEEEecCC-CEEEEecCCCeEEEEECCCCeEE
Q 023642 193 VHIVDVGSGTMESL-ANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG-RELVAGSSDDCIYVYDLEANKLS 262 (279)
Q Consensus 193 i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g-~~l~t~s~d~~i~vwd~~~~~~~ 262 (279)
|.++| .+++.... .... .++.+.|++ +.+++.+.|+.+.++|. +++.+
T Consensus 150 v~viD-~t~~~~~~~i~~~--------------------~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~ 199 (373)
T 2mad_H 150 VGLVV-QGGSSDDQLLSSP--------------------TCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAA 199 (373)
T ss_pred EEEEE-CCCCEEeEEcCCC--------------------ceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEE
Confidence 99999 88876433 2110 123444554 34455667778888888 66655
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.43 E-value=1e-05 Score=66.54 Aligned_cols=129 Identities=10% Similarity=0.042 Sum_probs=87.6
Q ss_pred CCceeeCCCCCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEE
Q 023642 116 GPWPVDQTTSRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVH 194 (279)
Q Consensus 116 ~~~~l~~h~~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~ 194 (279)
....+..........+|+|+++ +++++..++.|..|+.. +.. .. +......+..++++|+|+++++...++.|.
T Consensus 36 ~~~~l~~~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~-~~---~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 36 RLLTLYDQATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTV-DV---LLDATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp CCEEEECCCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCE-EE---EEESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred ceEEEecCCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCE-EE---EeCCCCccceeeECCCCCEEEEECCCCEEE
Confidence 3445666777888999999998 66777788999999984 432 22 223445689999999999777766678899
Q ss_pred EEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEE----ecC-------------CCeEEEEECC
Q 023642 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA----GSS-------------DDCIYVYDLE 257 (279)
Q Consensus 195 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t----~s~-------------d~~i~vwd~~ 257 (279)
+|+.. ++...+....... ....+..++++|+|++++| |.. .+.|+.||..
T Consensus 111 ~~~~~-g~~~~~~~~~~~~------------~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~ 177 (305)
T 3dr2_A 111 RSDAD-GQAHLLVGRYAGK------------RLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPD 177 (305)
T ss_dssp EECTT-SCEEEEECEETTE------------ECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSS
T ss_pred EECCC-CCEEEEEeccCCC------------ccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCC
Confidence 99986 5543322111000 0124677999999998886 432 2468888876
Q ss_pred CCeEE
Q 023642 258 ANKLS 262 (279)
Q Consensus 258 ~~~~~ 262 (279)
+++..
T Consensus 178 ~g~~~ 182 (305)
T 3dr2_A 178 GSPLQ 182 (305)
T ss_dssp SCCCE
T ss_pred CCcEE
Confidence 66543
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.42 E-value=5.3e-06 Score=70.36 Aligned_cols=78 Identities=19% Similarity=0.291 Sum_probs=59.9
Q ss_pred EEECCCCCEEEEEe----------CCCcEEEEEcCCCeEEeeeeeccC----CCcceEEEEECCCCCEEEEEeC--CCeE
Q 023642 130 SQFSADGSLFVAGF----------QASQIRIYDVERGWKIQKDILAKS----LRWTVTDTSLSPDQRHLVYASM--SPIV 193 (279)
Q Consensus 130 ~~~spd~~~l~s~~----------~d~~i~iwd~~~~~~~~~~~~~~~----~~~~v~~~~~sp~~~~l~~~~~--d~~i 193 (279)
++++|||++++.++ .++.|.+||..+.+.+..+....+ .......++|+|||++++.++. ++.|
T Consensus 83 va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~V 162 (386)
T 3sjl_D 83 PVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAV 162 (386)
T ss_dssp EEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEE
T ss_pred EEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeE
Confidence 99999999887765 367899999999977766433221 1124567999999999988874 6899
Q ss_pred EEEECCCCceeeee
Q 023642 194 HIVDVGSGTMESLA 207 (279)
Q Consensus 194 ~i~d~~~~~~~~~~ 207 (279)
.++|+.+++.....
T Consensus 163 sVID~~t~~vv~tI 176 (386)
T 3sjl_D 163 GVVDLEGKAFKRML 176 (386)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEECCCCcEEEEE
Confidence 99999999875543
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.41 E-value=5.8e-05 Score=61.06 Aligned_cols=121 Identities=13% Similarity=0.051 Sum_probs=89.1
Q ss_pred CCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCC
Q 023642 122 QTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~ 201 (279)
.....+.+++++++|+++++...++.|.+||.. ++... . ........+.++++.++++++++...++.|..||.. +
T Consensus 17 ~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 17 IPDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-F-EVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp STTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-E-ECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-E-ECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 345778999999999988887788999999988 54332 1 122333568999999999988877778899999987 5
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEE
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS 262 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~ 262 (279)
+....... . ....+.++++.++|.++++...++.|..||.. ++..
T Consensus 93 ~~~~~~~~----------~-----~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~ 137 (300)
T 2qc5_A 93 GFTEYPLP----------Q-----PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY 137 (300)
T ss_dssp CEEEEECS----------S-----TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE
T ss_pred CeEEecCC----------C-----CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE
Confidence 54322110 0 11268899999999988887778899999987 5544
No 215
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.38 E-value=4.5e-06 Score=71.87 Aligned_cols=120 Identities=14% Similarity=0.032 Sum_probs=84.7
Q ss_pred CCCCEEEEEeCC-----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe----------CCCeEEEEEC
Q 023642 134 ADGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHIVDV 198 (279)
Q Consensus 134 pd~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~d~~i~i~d~ 198 (279)
|+++.++..... +.|.++|..+.+.+..+.... .+ .++++||+++|+.++ .++.|.++|.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~---~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~ 156 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGF---LP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDP 156 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECS---SC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCC---CC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEEC
Confidence 466766655442 699999999998776654322 23 799999999988776 3678999999
Q ss_pred CCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC--CCeEEEEECCCCeEEEEEeC
Q 023642 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~--d~~i~vwd~~~~~~~~~~~~ 267 (279)
.+.+........... .+. .......+.|+|||++|+.+.. ++.|.+.|+.+++.+.+++-
T Consensus 157 ~t~~vv~~I~v~g~~---r~~------~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 157 VTFLPIADIELPDAP---RFL------VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp TTCCEEEEEEETTCC---CCC------BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCcEEEEEECCCcc---ccc------cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 998875433221000 000 0012345789999999998764 57899999999999988874
No 216
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.36 E-value=8.2e-05 Score=60.16 Aligned_cols=120 Identities=11% Similarity=0.067 Sum_probs=86.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 023642 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~ 202 (279)
....+.+++++|+++++++...++.|..||.. ++.... ........+.++++.|+++++++...++.|..||. +++
T Consensus 102 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~--~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~ 177 (300)
T 2qc5_A 102 PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYEY--DLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGK 177 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEE--ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC
T ss_pred CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEEc--cCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCc
Confidence 34678999999999988887778899999988 544321 12223446899999999997777666789999998 555
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEE
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS 262 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~ 262 (279)
....... . ....+..++++++|.++++....+.|.+||. +++..
T Consensus 178 ~~~~~~~----------~-----~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 221 (300)
T 2qc5_A 178 LEEYPLP----------T-----NAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS 221 (300)
T ss_dssp EEEEECS----------S-----TTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred EEEeeCC----------C-----CCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE
Confidence 4322110 0 1236789999999988777767778999998 45433
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.35 E-value=4.8e-05 Score=63.14 Aligned_cols=134 Identities=15% Similarity=0.118 Sum_probs=86.5
Q ss_pred CCeEEEEECCCCCEEEEEeC------CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEE-eCCCeEEEEE
Q 023642 125 SRAYVSQFSADGSLFVAGFQ------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVD 197 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~i~d 197 (279)
..++.++++|+|+++++... .+.|..++ +++.. ... ........++|+||++.|+.+ +.++.|.+||
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~-~~~---~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d 207 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVT-KLF---ADISIPNSICFSPDGTTGYFVDTKVNRLMRVP 207 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEE-EEE---EEESSEEEEEECTTSCEEEEEETTTCEEEEEE
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEE-Eee---CCCcccCCeEEcCCCCEEEEEECCCCEEEEEE
Confidence 46899999999997776542 24555556 45332 211 122246789999999877555 4578999999
Q ss_pred CC--CC-ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeE
Q 023642 198 VG--SG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIAL 274 (279)
Q Consensus 198 ~~--~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~ 274 (279)
+. ++ ...... .+.... .....+..++++++|.+.++...++.|.+||. +++.+..+..+...+.+
T Consensus 208 ~~~~~Gl~~~~~~---------~~~~~~--~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~ 275 (326)
T 2ghs_A 208 LDARTGLPTGKAE---------VFIDST--GIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTC 275 (326)
T ss_dssp BCTTTCCBSSCCE---------EEEECT--TSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEE
T ss_pred cccccCCcccCce---------EEEECC--CCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEE
Confidence 86 55 321000 010000 01125678999999988777666788999998 57777888776666666
Q ss_pred EE
Q 023642 275 WI 276 (279)
Q Consensus 275 v~ 276 (279)
+.
T Consensus 276 ~a 277 (326)
T 2ghs_A 276 PA 277 (326)
T ss_dssp EE
T ss_pred EE
Confidence 65
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.30 E-value=1.6e-05 Score=68.29 Aligned_cols=121 Identities=8% Similarity=0.055 Sum_probs=83.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCC--eEEEEECCCC
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP--IVHIVDVGSG 201 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~i~i~d~~~~ 201 (279)
-.....++|+|+++++++...++.|++||..++..... . .... ... ++|+|+++.|+.+..++ .|.+|+..++
T Consensus 130 ~~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~-~--~~~~-~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~ 204 (409)
T 3hrp_A 130 FKYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTV-H--PGFK-GGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASG 204 (409)
T ss_dssp CCCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEE-E--ETCC-BCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGT
T ss_pred cCCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEe-e--ccCC-CCc-eeEecCCCcEEEEecCCCceEEEEEcCCC
Confidence 45688999999999888888889999999998754332 1 1222 234 99999999999888765 7999998765
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeE
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~ 261 (279)
.......... . .....+.+++++|++..|+.+..++.|+.||..++..
T Consensus 205 ~~~~~~g~~~--------~----~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~ 252 (409)
T 3hrp_A 205 WAPTRIGQLG--------S----TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV 252 (409)
T ss_dssp TCEEEEEECC--------T----TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE
T ss_pred ceeEEeeecc--------c----hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE
Confidence 5421110000 0 0112567899999544555566788999999987753
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.29 E-value=1.7e-05 Score=66.41 Aligned_cols=133 Identities=11% Similarity=-0.017 Sum_probs=86.9
Q ss_pred CCeEEEEECCCCCEEEEEeC--CCcEEEEEcCCCeEEeeee----eccCCCcceEEEEECCCCCEEEEEeC-----CCeE
Q 023642 125 SRAYVSQFSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDI----LAKSLRWTVTDTSLSPDQRHLVYASM-----SPIV 193 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~--d~~i~iwd~~~~~~~~~~~----~~~~~~~~v~~~~~sp~~~~l~~~~~-----d~~i 193 (279)
.....++++|+|+.+++... ++.++||.+.+++.. .+. ....+...+..++++|+++++++-.. ++.|
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~-~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i 95 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLI-PFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKL 95 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEE-ESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCee-cCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeE
Confidence 67899999999999988642 342555655455322 110 11234457999999999887665543 5789
Q ss_pred EEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCE-EEEec---CCCeEEEEECCCCeEEEEEeCC
Q 023642 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRE-LVAGS---SDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 194 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~-l~t~s---~d~~i~vwd~~~~~~~~~~~~h 268 (279)
.+||+.+++........... ..+...+..++++|++.. +++.. .++.|.+||+.+++....+.+|
T Consensus 96 ~~~d~~tg~~~~~~~~~~~~----------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~ 164 (343)
T 2qe8_A 96 VAWDTLNNQLSRVIYLPPPI----------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGY 164 (343)
T ss_dssp EEEETTTTEEEEEEECCTTT----------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTC
T ss_pred EEEECCCCeEEEEEECChhh----------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCC
Confidence 99999988754322211100 002235678999986544 45554 5789999999988877777654
No 220
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.26 E-value=2.9e-05 Score=71.39 Aligned_cols=126 Identities=10% Similarity=0.045 Sum_probs=78.2
Q ss_pred EEEEECCCCCEEEEEeCCC-------------cEEEEEcCCCeEEe-eeeeccC-CCcceEEEEECCCCCEEEEEeC---
Q 023642 128 YVSQFSADGSLFVAGFQAS-------------QIRIYDVERGWKIQ-KDILAKS-LRWTVTDTSLSPDQRHLVYASM--- 189 (279)
Q Consensus 128 ~~~~~spd~~~l~s~~~d~-------------~i~iwd~~~~~~~~-~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~--- 189 (279)
..++|+ |++.|+.++.+. .|++|++.++.... .+..... +...+..+.|+|||++|+....
T Consensus 178 ~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 178 SGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp CCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 577899 999999888774 39999998764211 1111223 3445788999999998865442
Q ss_pred -CCeEEEEECCCCc--eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEE-ecCC---CeEEEEECCCCeE-
Q 023642 190 -SPIVHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA-GSSD---DCIYVYDLEANKL- 261 (279)
Q Consensus 190 -d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t-~s~d---~~i~vwd~~~~~~- 261 (279)
+..++++|+.++. ...+.. +....... |+++|..|+. ...+ ..|.++|+.++..
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l~~-----------------~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~ 318 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTVQG-----------------DLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA 318 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEEEC-----------------SSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG
T ss_pred CCcEEEEEECCCCCCceEEEeC-----------------CCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 2489999998763 222211 11133333 5666665554 3333 5799999987654
Q ss_pred -EEEEeCCCcce
Q 023642 262 -SLRILAHTVNI 272 (279)
Q Consensus 262 -~~~~~~h~~~v 272 (279)
...+..|...+
T Consensus 319 ~~~~l~~~~~~~ 330 (693)
T 3iuj_A 319 HWRDLIPERQQV 330 (693)
T ss_dssp GCEEEECCCSSC
T ss_pred ccEEEecCCCCE
Confidence 23454454443
No 221
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.25 E-value=9e-05 Score=61.92 Aligned_cols=134 Identities=10% Similarity=0.102 Sum_probs=83.4
Q ss_pred CCCCCeEEEEECCCCCEEEEEeC-----CCcEEEEEcCCCeEEeeeeec---cCCCcceEEEEECCCCCEE-EEEe---C
Q 023642 122 QTTSRAYVSQFSADGSLFVAGFQ-----ASQIRIYDVERGWKIQKDILA---KSLRWTVTDTSLSPDQRHL-VYAS---M 189 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~~-----d~~i~iwd~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l-~~~~---~ 189 (279)
+|...+..++++|+++++++-.. +.+|.+||+.+++.+...... ..+...+..++++|++..+ ++-. .
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~ 143 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDD 143 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGG
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCC
Confidence 56678999999999987776543 579999999998755443211 1223457899999875554 4444 5
Q ss_pred CCeEEEEECCCCceeeeecc--ccccceeEEeeCC-------CCC----ccccEEEEEEecCCCEEEEecCCC-eEEEEE
Q 023642 190 SPIVHIVDVGSGTMESLANV--TEIHDGLDFSAAD-------DGG----YSFGIFSLKFSTDGRELVAGSSDD-CIYVYD 255 (279)
Q Consensus 190 d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~~~~~-------~~~----~~~~v~~~~~sp~g~~l~t~s~d~-~i~vwd 255 (279)
++.|.+||+.+++....... ........+...+ ..+ ....+..++|+|+|+.|+.+..++ .++.++
T Consensus 144 ~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 144 KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 78999999988776443211 0000001111111 000 012468899999999888776554 555555
No 222
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.24 E-value=2.6e-08 Score=84.61 Aligned_cols=141 Identities=12% Similarity=0.089 Sum_probs=69.4
Q ss_pred ccccceEeeeeecCCCCceeeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceE-EEEECC
Q 023642 101 AADCCHMLSRYLPVNGPWPVDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVT-DTSLSP 179 (279)
Q Consensus 101 ~~d~~~~~~~~~~~~~~~~l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~-~~~~sp 179 (279)
+.++.+..|+....+..+.+.. +.+.+..+.+++..+++++.|+.|+.||..+|+.+..... .....+. ...+.
T Consensus 16 s~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~--~~~~~~~~sp~~~- 90 (369)
T 2hz6_A 16 TLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPF--TIPELVQASPCRS- 90 (369)
T ss_dssp ETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSC--CHHHHHTTCSCC--
T ss_pred cCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeec--cCccccccCceEe-
Confidence 3455666666555555555554 4555555667788888888999999999988865443210 0001110 00111
Q ss_pred CCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 180 DQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 180 ~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
++..+++++.|+.++.||..+|+....... + . ...++|++..+++++.|+.|+.||.++|
T Consensus 91 ~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~----------------~--~--~~~~~p~~~~v~~~~~dg~v~a~d~~tG 150 (369)
T 2hz6_A 91 SDGILYMGKKQDIWYVIDLLTGEKQQTLSS----------------A--F--ADSLSPSTSLLYLGRTEYTITMYDTKTR 150 (369)
T ss_dssp ----CCCCEEEEEEEEECCC------------------------------------------EEEEEEEEEEECCCSSSS
T ss_pred cCCEEEEEeCCCEEEEEECCCCcEEEEecC----------------C--C--cccccccCCEEEEEecCCEEEEEECCCC
Confidence 345677788899999999999987432211 0 0 1345668888899999999999999998
Q ss_pred eEEEEEe
Q 023642 260 KLSLRIL 266 (279)
Q Consensus 260 ~~~~~~~ 266 (279)
+.+-++.
T Consensus 151 ~~~W~~~ 157 (369)
T 2hz6_A 151 ELRWNAT 157 (369)
T ss_dssp SCCCEEE
T ss_pred CEEEeEe
Confidence 8665543
No 223
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.23 E-value=3.4e-05 Score=70.69 Aligned_cols=122 Identities=11% Similarity=0.055 Sum_probs=85.3
Q ss_pred EECCCC---CEEEEEeCCCcEEEEEcCCCeEEeeeeecc--------CCCcce------------------------EEE
Q 023642 131 QFSADG---SLFVAGFQASQIRIYDVERGWKIQKDILAK--------SLRWTV------------------------TDT 175 (279)
Q Consensus 131 ~~spd~---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~--------~~~~~v------------------------~~~ 175 (279)
....+| ..++.++.+|.|.++|..+|+.+....... ....++ ..+
T Consensus 319 ~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~ 398 (677)
T 1kb0_A 319 DIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPM 398 (677)
T ss_dssp EEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCC
T ss_pred ecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCc
Confidence 334477 678999999999999999998765532110 000011 156
Q ss_pred EECCCCCEEEEEeC-------------------------------------------CCeEEEEECCCCceeeeeccccc
Q 023642 176 SLSPDQRHLVYASM-------------------------------------------SPIVHIVDVGSGTMESLANVTEI 212 (279)
Q Consensus 176 ~~sp~~~~l~~~~~-------------------------------------------d~~i~i~d~~~~~~~~~~~~~~~ 212 (279)
+|+|+..++++... .+.|..||+.+++........
T Consensus 399 a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~-- 476 (677)
T 1kb0_A 399 SFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHV-- 476 (677)
T ss_dssp EEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEES--
T ss_pred eEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCC--
Confidence 88998888776543 167999999998875433211
Q ss_pred cceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCC
Q 023642 213 HDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT 269 (279)
Q Consensus 213 ~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~ 269 (279)
..+....++.++..++.++.|+.+++||.++|+.+.++....
T Consensus 477 ---------------~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 477 ---------------SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp ---------------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred ---------------CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCC
Confidence 123344566778888889999999999999999999997443
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.20 E-value=5.5e-05 Score=60.77 Aligned_cols=119 Identities=15% Similarity=0.100 Sum_probs=81.0
Q ss_pred CeEEEEECCCCCEEEEEeC--CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCc
Q 023642 126 RAYVSQFSADGSLFVAGFQ--ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGT 202 (279)
Q Consensus 126 ~V~~~~~spd~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~ 202 (279)
....++|+||+.++++.+. ++.|+++|+.+++.+..... ..+ .....+++ ++..|+.+. .++.+.++|..+.+
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l-~~~-~fgeGi~~--~g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKM-DDS-YFGEGLTL--LNEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEEC-CTT-CCEEEEEE--ETTEEEEEETTCSEEEEEETTTTE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEec-CCC-cceEEEEE--eCCEEEEEEecCCEEEEEECCCCc
Confidence 3578999999766666554 57999999999987765432 222 12234444 455665554 67899999999888
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
........ .. . ...+++||+.++.+..++.|.++|..+.+.+.++.
T Consensus 98 v~~~i~~g-~~---------------~--g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~ 143 (266)
T 2iwa_A 98 NIKNFTHQ-MK---------------D--GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHN 143 (266)
T ss_dssp EEEEEECC-SS---------------S--CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEE
T ss_pred EEEEEECC-CC---------------C--eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEE
Confidence 75433221 00 1 12355688877776678899999999988888887
No 225
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.18 E-value=4.6e-05 Score=65.61 Aligned_cols=119 Identities=17% Similarity=0.091 Sum_probs=82.0
Q ss_pred EEECCCCCEEEEEeCCCcEEEEEcCCCeEEe-eeeecc-----C---CCcceEEEEECCCCCEEEEEeC----------C
Q 023642 130 SQFSADGSLFVAGFQASQIRIYDVERGWKIQ-KDILAK-----S---LRWTVTDTSLSPDQRHLVYASM----------S 190 (279)
Q Consensus 130 ~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~-~~~~~~-----~---~~~~v~~~~~sp~~~~l~~~~~----------d 190 (279)
+.|++++..++..+..++|.+.|........ ...... . .......++++|+++.++.... +
T Consensus 270 ~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s 349 (426)
T 3c75_H 270 PAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAAS 349 (426)
T ss_dssp CEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCE
T ss_pred eeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCC
Confidence 4567777777766777888888886543211 100000 0 0111223789999988776542 3
Q ss_pred CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCC-EEEEec-CCCeEEEEECCCCeEEEEE
Q 023642 191 PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR-ELVAGS-SDDCIYVYDLEANKLSLRI 265 (279)
Q Consensus 191 ~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~-~l~t~s-~d~~i~vwd~~~~~~~~~~ 265 (279)
+.|.++|+.+.+......... ....+.|+|||+ ++++.. .++.|.|+|+.+++.+.++
T Consensus 350 ~~VsVID~~T~kvv~~I~vg~-----------------~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 350 RFVVVLNAETGERINKIELGH-----------------EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEEEEEETTTCCEEEEEEEEE-----------------EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CEEEEEECCCCeEEEEEECCC-----------------CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 579999999988754432211 467899999999 888777 5899999999999999998
No 226
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.18 E-value=1.4e-05 Score=74.11 Aligned_cols=116 Identities=15% Similarity=0.139 Sum_probs=76.4
Q ss_pred CeEEEEEC-CCCCEEEEEeC-CC----cEEEEEcCCC-eEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-----CeE
Q 023642 126 RAYVSQFS-ADGSLFVAGFQ-AS----QIRIYDVERG-WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIV 193 (279)
Q Consensus 126 ~V~~~~~s-pd~~~l~s~~~-d~----~i~iwd~~~~-~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i 193 (279)
.+...+|| |||++|+.+.. +| +|+++|+.++ +.+...+ ......++|+|||+.|+....+ ..|
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~-----~~~~~~~~WspDg~~l~y~~~d~~~~~~~v 249 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKV-----SGTNGEIVWGPDHTSLFYVTKDETLRENKV 249 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCE-----EEECSCCEECSSTTEEEEEEECTTCCEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccc-----cCceeeEEEecCCCEEEEEEECCCCCCCEE
Confidence 67889999 99998875533 22 5999999988 6322111 1124568899999988877655 258
Q ss_pred EEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec---CCCeEEEEECCCC
Q 023642 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS---SDDCIYVYDLEAN 259 (279)
Q Consensus 194 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s---~d~~i~vwd~~~~ 259 (279)
+++++.++...... .+... .......+.|||||++|+..+ ....|+++|+.++
T Consensus 250 ~~~~lgt~~~~~~l---------v~~~~----~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 250 WRHVMGKLQSEDVC---------LYEEH----NPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp EEEETTSCGGGCEE---------EEECC----CTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSC
T ss_pred EEEECCCCchhcEE---------EEecC----CCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCC
Confidence 88888766421100 11111 112456789999999888654 2346999999875
No 227
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.15 E-value=3.4e-05 Score=61.55 Aligned_cols=118 Identities=13% Similarity=0.053 Sum_probs=82.3
Q ss_pred CeEEEEECCCCCEEEEEeCCC--cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCc
Q 023642 126 RAYVSQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGT 202 (279)
Q Consensus 126 ~V~~~~~spd~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~ 202 (279)
-...+.|+ ++.++.+.+.++ .|+++|+.+++.+..... . .......+.+++..|.... .++.+.+||..+.+
T Consensus 44 ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l-~---~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~ 118 (262)
T 3nol_A 44 FTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIEL-G---KRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLR 118 (262)
T ss_dssp EEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEEC-C---TTCCEEEEEEETTEEEEEESSSSEEEEEETTTCC
T ss_pred ccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEec-C---CccceeEEEEeCCEEEEEEeeCCEEEEEECccCc
Confidence 34788898 677778888776 999999999987766432 2 2344444445566666555 58899999999988
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
......... ....+++|++.|+.+..++.|.++|..+.+.+.+++-
T Consensus 119 ~~~ti~~~~-------------------eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V 164 (262)
T 3nol_A 119 QVRSFNYDG-------------------EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITV 164 (262)
T ss_dssp EEEEEECSS-------------------CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEEC
T ss_pred EEEEEECCC-------------------CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEe
Confidence 754333210 1123346777777766678899999999888888764
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.09 E-value=7.8e-05 Score=64.07 Aligned_cols=137 Identities=12% Similarity=0.065 Sum_probs=85.1
Q ss_pred eEEEEECCCCCEEEEEe-------------------CCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEE--CCCCCEEE
Q 023642 127 AYVSQFSADGSLFVAGF-------------------QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL--SPDQRHLV 185 (279)
Q Consensus 127 V~~~~~spd~~~l~s~~-------------------~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~ 185 (279)
-+.+.|+|+++.++++. .+.+|.+||+.+++.+..+. ..........+.| +|++++++
T Consensus 190 ~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~-vg~~g~~P~~i~f~~~Pdg~~aY 268 (462)
T 2ece_A 190 AYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLT-LGEENRMALELRPLHDPTKLMGF 268 (462)
T ss_dssp CCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEE-SCTTEEEEEEEEECSSTTCCEEE
T ss_pred cceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEe-cCCCCCccceeEeeECCCCCEEE
Confidence 45688999999888885 36899999999886555432 2212223455655 99999977
Q ss_pred EEe------CCCeEEEEECCCCceeeeeccccccceeEEeeCC------CCCccccEEEEEEecCCCEEEEecC-CCeEE
Q 023642 186 YAS------MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAAD------DGGYSFGIFSLKFSTDGRELVAGSS-DDCIY 252 (279)
Q Consensus 186 ~~~------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~v~~~~~sp~g~~l~t~s~-d~~i~ 252 (279)
.++ .+++|.+|....+......... ... ..+...- -.+-......+.+||||++|.++.. .+.|.
T Consensus 269 V~~e~~~~~Lss~V~v~~~d~g~~~~~~vId-i~~-~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~Va 346 (462)
T 2ece_A 269 INMVVSLKDLSSSIWLWFYEDGKWNAEKVIE-IPA-EPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVR 346 (462)
T ss_dssp EEEEEETTTCCEEEEEEEEETTEEEEEEEEE-ECC-EECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEE
T ss_pred EEEeeeccCCCceEEEEEecCCceeEEEEEe-CCC-ccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEE
Confidence 666 5678888776655432222110 000 0000000 0000124678999999999987765 67999
Q ss_pred EEECC---CCeEEEEEe
Q 023642 253 VYDLE---ANKLSLRIL 266 (279)
Q Consensus 253 vwd~~---~~~~~~~~~ 266 (279)
+||+. +.+.+..+.
T Consensus 347 vfdV~d~~~~~lv~~I~ 363 (462)
T 2ece_A 347 QYDISNPFKPVLTGKVK 363 (462)
T ss_dssp EEECSSTTSCEEEEEEE
T ss_pred EEEecCCCCcEEEEEEE
Confidence 99985 345666665
No 229
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.08 E-value=4.8e-07 Score=76.80 Aligned_cols=114 Identities=11% Similarity=-0.032 Sum_probs=60.9
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccc
Q 023642 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD 214 (279)
Q Consensus 135 d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 214 (279)
++..+++++.|+.|..||..+|+.+..... +.+.+..+.+++..+++++.|+.++.||..+|+...........
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-----~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~- 81 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-----DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPE- 81 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-----CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHHH-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-----CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCcc-
Confidence 678899999999999999999988776432 24555556677878888889999999999888764322111000
Q ss_pred eeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 215 ~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
.. ...++ +. ++..+++++.++.|+.||..+|+.+.++..+
T Consensus 82 ~~---------~~sp~----~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~ 121 (369)
T 2hz6_A 82 LV---------QASPC----RS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSA 121 (369)
T ss_dssp HH---------TTCSC----C------CCCCEEEEEEEEECCC-----------
T ss_pred cc---------ccCce----Ee-cCCEEEEEeCCCEEEEEECCCCcEEEEecCC
Confidence 00 00011 11 3446777888999999999999988777654
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.05 E-value=0.00017 Score=66.17 Aligned_cols=117 Identities=15% Similarity=0.080 Sum_probs=80.6
Q ss_pred CCC---EEEEEeCCCcEEEEEcCCCeEEeeeeecc-------------------------CCCc-----------ceEEE
Q 023642 135 DGS---LFVAGFQASQIRIYDVERGWKIQKDILAK-------------------------SLRW-----------TVTDT 175 (279)
Q Consensus 135 d~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-------------------------~~~~-----------~v~~~ 175 (279)
+|+ .++.++.+|.++++|..+|+.+....... .... .-..+
T Consensus 315 ~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~ 394 (689)
T 1yiq_A 315 DGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPM 394 (689)
T ss_dssp TTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCC
T ss_pred CCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcc
Confidence 565 78889999999999999998764321100 0000 01136
Q ss_pred EECCCCCEEEEEeC---------------------------------------------CCeEEEEECCCCceeeeeccc
Q 023642 176 SLSPDQRHLVYASM---------------------------------------------SPIVHIVDVGSGTMESLANVT 210 (279)
Q Consensus 176 ~~sp~~~~l~~~~~---------------------------------------------d~~i~i~d~~~~~~~~~~~~~ 210 (279)
+|+|+..++++... ++.+..||+.+++........
T Consensus 395 a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~ 474 (689)
T 1yiq_A 395 SYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYV 474 (689)
T ss_dssp EEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEES
T ss_pred eECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCC
Confidence 88898887776532 367899999998875432211
Q ss_pred cccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 211 EIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
..+..-.++..+..++.++.|+.|+.||.++|+.+-+++..
T Consensus 475 -----------------~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~ 515 (689)
T 1yiq_A 475 -----------------TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAA 515 (689)
T ss_dssp -----------------SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred -----------------CCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCC
Confidence 12222355667888899999999999999999999888754
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.02 E-value=5.4e-05 Score=60.44 Aligned_cols=118 Identities=11% Similarity=0.055 Sum_probs=81.2
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEE-EeCCCeEEEEECCCCce
Q 023642 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSGTM 203 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~i~d~~~~~~ 203 (279)
.-...+.|+ ++.++.+.+.++.|+++|+.+++.+... +.. ........+++..|+. .-.++.+.+||..+.+.
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~---~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~ 128 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME--RLG---NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQR 128 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE--ECT---TCCEEEEEECSSCEEEEESSSCEEEEEETTTTEE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE--CCC---CcceeEEEEeCCEEEEEEccCCEEEEEECCcCcE
Confidence 334788887 4677788889999999999999877664 222 2333333344555444 44688999999999887
Q ss_pred eeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
....... + .-+.++ +|++.|+.+..++.|+++|..+.+.+.+++-
T Consensus 129 ~~ti~~~---------~--------eGwGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V 173 (268)
T 3nok_A 129 ERTTRYS---------G--------EGWGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQV 173 (268)
T ss_dssp EEEEECS---------S--------CCCCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred EEEEeCC---------C--------ceeEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEe
Confidence 5443321 0 112233 5678887777788999999999998888864
No 232
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.01 E-value=0.00019 Score=56.68 Aligned_cols=119 Identities=13% Similarity=0.089 Sum_probs=80.4
Q ss_pred CCeEEEEECCCCCEEEEEeCCC--cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCCC
Q 023642 125 SRAYVSQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGSG 201 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~i~d~~~~ 201 (279)
.-...+.|++ +.++.+.+.+| .|+++|+.+++.+..... .. ........+++..|+.. -.++.+.+||..+.
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l-~~---~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl 95 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEV-PP---PYFGAGIVAWRDRLIQLTWRNHEGFVYDLATL 95 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEEC-CT---TCCEEEEEEETTEEEEEESSSSEEEEEETTTT
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeC-CC---CcceeEEEEeCCEEEEEEeeCCEEEEEECCcC
Confidence 4467889987 56667777754 899999999987765432 22 23334444455555544 46889999999998
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
+......... .-+.+ .+++..|+.+..++.|.++|..+.+.+.+++-
T Consensus 96 ~~~~ti~~~~-----------------~Gwgl--t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V 142 (243)
T 3mbr_X 96 TPRARFRYPG-----------------EGWAL--TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKV 142 (243)
T ss_dssp EEEEEEECSS-----------------CCCEE--EECSSCEEEECSSSEEEEECTTTCCEEEEEEC
T ss_pred cEEEEEeCCC-----------------CceEE--eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEE
Confidence 8754332210 11233 35677666666688999999999988888864
No 233
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.97 E-value=0.00012 Score=65.05 Aligned_cols=135 Identities=16% Similarity=0.191 Sum_probs=84.9
Q ss_pred EEEEECCCCCEEEEEeCCC--------------------------------------cEEEEEcCC--CeE-Eeeeeecc
Q 023642 128 YVSQFSADGSLFVAGFQAS--------------------------------------QIRIYDVER--GWK-IQKDILAK 166 (279)
Q Consensus 128 ~~~~~spd~~~l~s~~~d~--------------------------------------~i~iwd~~~--~~~-~~~~~~~~ 166 (279)
..++++|||+++++.+.+. .|.+.|..+ +.. +..+...
T Consensus 198 d~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg- 276 (595)
T 1fwx_A 198 DNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA- 276 (595)
T ss_dssp CCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE-
T ss_pred cceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC-
Confidence 4577999999998887543 467777776 433 2222111
Q ss_pred CCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEe
Q 023642 167 SLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG 245 (279)
Q Consensus 167 ~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~ 245 (279)
....++.++|||++++.++ .+.+|.++|+.+.+...--+. ........... --.....++|+|+|...++.
T Consensus 277 ---~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l-~~~~~v~~~v~----vG~gP~h~aF~~dG~aY~t~ 348 (595)
T 1fwx_A 277 ---NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENA-DPRSAVVAEPE----LGLGPLHTAFDGRGNAYTSL 348 (595)
T ss_dssp ---SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCC-CGGGGEEECCB----CCSCEEEEEECTTSEEEEEE
T ss_pred ---CCceEEEEcCCCCEEEEeCCCCCeEEEEECccccccccccc-CcccceEEEcC----CCCCcceEEECCCCeEEEEE
Confidence 1467799999999977665 678999999986531000000 00000000000 00157889999999434456
Q ss_pred cCCCeEEEEECCC----------CeEEEEEeCCCcc
Q 023642 246 SSDDCIYVYDLEA----------NKLSLRILAHTVN 271 (279)
Q Consensus 246 s~d~~i~vwd~~~----------~~~~~~~~~h~~~ 271 (279)
-.|+.|.+||+.+ .+.+.++..|.++
T Consensus 349 ~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqp 384 (595)
T 1fwx_A 349 FLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQP 384 (595)
T ss_dssp TTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCE
T ss_pred ecCCcEEEEEhhHhhhhhcccccceeEEEeeccccc
Confidence 6799999999987 6788888877553
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.92 E-value=4.2e-05 Score=64.68 Aligned_cols=98 Identities=9% Similarity=-0.060 Sum_probs=68.9
Q ss_pred cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe----------CCCeEEEEECCCCceeeeecccccccee
Q 023642 147 QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----------MSPIVHIVDVGSGTMESLANVTEIHDGL 216 (279)
Q Consensus 147 ~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----------~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 216 (279)
+|.++|..+++.+..+.... .+ .+.++||+++++.+. .++.|.+||+.+++...........
T Consensus 47 ~vsvID~~t~~v~~~i~vG~---~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~--- 118 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAF---LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAP--- 118 (368)
T ss_dssp EEEEEETTTTEEEEEEEECT---TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSC---
T ss_pred eEEEEECCCCeEEEEEeCCC---CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCcc---
Confidence 88899999998877654322 24 799999999988886 3688999999999875443321000
Q ss_pred EEeeCCCCCccccEEEEEEecCCCEEEEecC--CCeEEE--EECCC
Q 023642 217 DFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYV--YDLEA 258 (279)
Q Consensus 217 ~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~--d~~i~v--wd~~~ 258 (279)
.+.. + .....++|+|||++++.+.. +..|.+ +|..+
T Consensus 119 ~~~~-g-----~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 119 RFSV-G-----PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp SCCB-S-----CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred cccc-C-----CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 0000 0 02346899999999988764 467888 99876
No 235
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=97.92 E-value=0.00016 Score=61.08 Aligned_cols=121 Identities=11% Similarity=0.051 Sum_probs=77.9
Q ss_pred CCCCCEEEEEeCCCcEEEEEcCCCe-EEeeeeecc-----CCC---cceEEEEECCCCCEEEEEeC---------CCeEE
Q 023642 133 SADGSLFVAGFQASQIRIYDVERGW-KIQKDILAK-----SLR---WTVTDTSLSPDQRHLVYASM---------SPIVH 194 (279)
Q Consensus 133 spd~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~-----~~~---~~v~~~~~sp~~~~l~~~~~---------d~~i~ 194 (279)
++++..++..+. +.|.+.|+.... .+.....+. .+. .....++|+||++.++.+.. +..+.
T Consensus 219 ~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ 297 (368)
T 1mda_H 219 ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTS 297 (368)
T ss_dssp ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEE
T ss_pred cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEE
Confidence 455555555555 788888886532 111111110 011 11222789999998876543 23566
Q ss_pred EEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCE-EEEec-CCCeEEEEECCCCeEEEEEeCCCcc
Q 023642 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRE-LVAGS-SDDCIYVYDLEANKLSLRILAHTVN 271 (279)
Q Consensus 195 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~-l~t~s-~d~~i~vwd~~~~~~~~~~~~h~~~ 271 (279)
++|+.+.+........ .....++|+|||++ +++.. .+++|.++|+.+++.+.+++....+
T Consensus 298 ViD~~t~~vv~~i~vg-----------------~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P 359 (368)
T 1mda_H 298 SVTASVGQTSGPISNG-----------------HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGP 359 (368)
T ss_dssp EEESSSCCEEECCEEE-----------------EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCC
T ss_pred EEECCCCeEEEEEECC-----------------CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCC
Confidence 9999998875433221 14678999999984 55666 5899999999999999999865544
No 236
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.91 E-value=0.00017 Score=61.94 Aligned_cols=123 Identities=17% Similarity=0.126 Sum_probs=82.9
Q ss_pred EEC--CCCCEEEE-EeCCCcEEEEEcCCC---eEEeeeee---c-cCC-CcceEEEEECCCCCEEEEEeCC------CeE
Q 023642 131 QFS--ADGSLFVA-GFQASQIRIYDVERG---WKIQKDIL---A-KSL-RWTVTDTSLSPDQRHLVYASMS------PIV 193 (279)
Q Consensus 131 ~~s--pd~~~l~s-~~~d~~i~iwd~~~~---~~~~~~~~---~-~~~-~~~v~~~~~sp~~~~l~~~~~d------~~i 193 (279)
.++ +++++|+. +-.+++|.++|+.+. -.+.+.+. + ... ......+...|+| .++++..+ +.+
T Consensus 88 ~~~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v 166 (462)
T 2ece_A 88 NGKPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGI 166 (462)
T ss_dssp TCCTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEE
T ss_pred ccCCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeE
Confidence 346 88888755 566789999998643 12223221 0 011 1135677889999 66666655 789
Q ss_pred EEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec-------------------CCCeEEEE
Q 023642 194 HIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-------------------SDDCIYVY 254 (279)
Q Consensus 194 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s-------------------~d~~i~vw 254 (279)
.++|..+.+.+.......... ..-+.+-|+|+++.+++.. .+.+|.+|
T Consensus 167 ~vlD~~T~~v~~~~~~~~~~~-------------~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~ 233 (462)
T 2ece_A 167 LMLDHYSFEPLGKWEIDRGDQ-------------YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW 233 (462)
T ss_dssp EEECTTTCCEEEECCSBCTTC-------------CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred EEEECCCCeEEEEEccCCCCc-------------cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence 999999988755433221111 1234678899999998874 36899999
Q ss_pred ECCCCeEEEEEeC
Q 023642 255 DLEANKLSLRILA 267 (279)
Q Consensus 255 d~~~~~~~~~~~~ 267 (279)
|+.+++.++++.-
T Consensus 234 D~~~~k~~~tI~v 246 (462)
T 2ece_A 234 DLRKRKRIHSLTL 246 (462)
T ss_dssp ETTTTEEEEEEES
T ss_pred ECCCCcEeeEEec
Confidence 9999988888874
No 237
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.91 E-value=0.001 Score=53.06 Aligned_cols=144 Identities=8% Similarity=-0.052 Sum_probs=91.7
Q ss_pred ccceEeeeeecCCCCceeeCCCCCeEE--EEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCC
Q 023642 103 DCCHMLSRYLPVNGPWPVDQTTSRAYV--SQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD 180 (279)
Q Consensus 103 d~~~~~~~~~~~~~~~~l~~h~~~V~~--~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 180 (279)
++.+...++...+....+ -...... +++.. +++.+..-.++.+.+||..+.+.+..+.. ... ...+++|
T Consensus 74 ~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~-~~e-----GwGLt~D 144 (268)
T 3nok_A 74 QGTLRQLSLESAQPVWME--RLGNIFAEGLASDG-ERLYQLTWTEGLLFTWSGMPPQRERTTRY-SGE-----GWGLCYW 144 (268)
T ss_dssp TTEEEECCSSCSSCSEEE--ECTTCCEEEEEECS-SCEEEEESSSCEEEEEETTTTEEEEEEEC-SSC-----CCCEEEE
T ss_pred CCEEEEEECCCCcEEeEE--CCCCcceeEEEEeC-CEEEEEEccCCEEEEEECCcCcEEEEEeC-CCc-----eeEEecC
Confidence 334555554444433333 2233333 44432 24444555788999999999987776432 222 1233467
Q ss_pred CCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCe
Q 023642 181 QRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK 260 (279)
Q Consensus 181 ~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~ 260 (279)
++.|+.+..++.|.++|..+.+............ --..++.+.|. +|+.++..-.+..|.+.|.++|+
T Consensus 145 g~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~-----------~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~ 212 (268)
T 3nok_A 145 NGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQ-----------PVELINELECA-NGVIYANIWHSSDVLEIDPATGT 212 (268)
T ss_dssp TTEEEEECSSSEEEEECTTTCCEEEEEECEETTE-----------ECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCB
T ss_pred CCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCc-----------ccccccccEEe-CCEEEEEECCCCeEEEEeCCCCc
Confidence 8888888889999999999988755443322111 01145677777 77666665568899999999999
Q ss_pred EEEEEeC
Q 023642 261 LSLRILA 267 (279)
Q Consensus 261 ~~~~~~~ 267 (279)
.+.++.-
T Consensus 213 V~~~Idl 219 (268)
T 3nok_A 213 VVGVIDA 219 (268)
T ss_dssp EEEEEEC
T ss_pred EEEEEEC
Confidence 9998874
No 238
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=97.79 E-value=0.0022 Score=51.44 Aligned_cols=120 Identities=16% Similarity=0.048 Sum_probs=81.6
Q ss_pred EEEECCCCCEE-EEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeee
Q 023642 129 VSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLA 207 (279)
Q Consensus 129 ~~~~spd~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 207 (279)
.++++ +..| ++.-.++.+.++|..+.+.+..+.. .... ...+++||+.++.+..++.+.++|..+.+.....
T Consensus 70 Gi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~-g~~~----g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I 142 (266)
T 2iwa_A 70 GLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTH-QMKD----GWGLATDGKILYGSDGTSILYEIDPHTFKLIKKH 142 (266)
T ss_dssp EEEEE--TTEEEEEETTCSEEEEEETTTTEEEEEEEC-CSSS----CCEEEECSSSEEEECSSSEEEEECTTTCCEEEEE
T ss_pred EEEEe--CCEEEEEEecCCEEEEEECCCCcEEEEEEC-CCCC----eEEEEECCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 44454 4455 4455678999999999977766432 2111 2346678888887778899999999998765443
Q ss_pred ccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 208 NVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
....... .-..++.+.|. +|..++....++.|.+.|..+++.+.++.-
T Consensus 143 ~Vg~~~~-----------p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~ 190 (266)
T 2iwa_A 143 NVKYNGH-----------RVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILL 190 (266)
T ss_dssp ECEETTE-----------ECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEEC
T ss_pred EECCCCc-----------ccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEEC
Confidence 3221100 01136778888 776666665688999999999999999873
No 239
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.69 E-value=0.0027 Score=54.07 Aligned_cols=122 Identities=15% Similarity=0.215 Sum_probs=78.5
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEE-----------eeeeeccC----CCcceEEEEECCC---CCEEEE
Q 023642 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI-----------QKDILAKS----LRWTVTDTSLSPD---QRHLVY 186 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~-----------~~~~~~~~----~~~~v~~~~~sp~---~~~l~~ 186 (279)
+.|..+..||+|++||..+. ..|.|-.+..+... .+...... ...+|..+.|||- +..|++
T Consensus 66 ~~i~qlvlSpsG~lLAl~g~-~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 66 DDTFHVISSTSGDLLCLFND-NEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp CTTCEEEECTTSSEEEEECS-SEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred CceeEEEECCCCCEEEEecC-CeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 36788999999999998876 58999888743211 01111211 2467999999995 568999
Q ss_pred EeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEE--ecCCCeEEE
Q 023642 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA--GSSDDCIYV 253 (279)
Q Consensus 187 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t--~s~d~~i~v 253 (279)
-..|++|++||+......+. ....... .|..+. .-..|.+++|.+++-.|.. .+..|.|+-
T Consensus 145 LtsD~~Ir~yDl~~s~~~P~-~L~k~~~--~fg~d~---~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYA 207 (452)
T 3pbp_A 145 LKEDDTITMFDILNSQEKPI-VLNKPNN--SFGLDA---RVNDITDLEFSKDGLTLYCLNTTEGGDIFA 207 (452)
T ss_dssp EETTSCEEEEETTCTTSCCE-EESCCCS--EEESCS---SCCCEEEEEECTTSSCEEEEECTTSCEEEE
T ss_pred EecCCEEEEEEcccCCCCCc-chhcccc--ccCCCc---ccceEEEEEEcCCCcEEEEEecCCCCCEEE
Confidence 99999999999987443222 1111111 122111 2247899999987765555 336676653
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.69 E-value=0.012 Score=46.83 Aligned_cols=122 Identities=6% Similarity=-0.102 Sum_probs=77.9
Q ss_pred CCeEEEEECCCCCEEEEEeC---CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEECCC
Q 023642 125 SRAYVSQFSADGSLFVAGFQ---ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVGS 200 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~---d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~ 200 (279)
.....++++|++..|..+.. .+.|..++++.... ... ..........++++|++..|+.+. ..+.|.++|..+
T Consensus 122 ~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~~-~~~--~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g 198 (267)
T 1npe_A 122 VNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTNR-RIL--AQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ 198 (267)
T ss_dssp SSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCCC-EEE--ECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE
T ss_pred CCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCCc-EEE--EECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC
Confidence 56789999997666655543 36888888874321 111 112223578999999877665544 567999999976
Q ss_pred CceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
........ .. .....++.. .+..+++....+.|.++|..+++.+.++..
T Consensus 199 ~~~~~~~~------------~~-----~~P~gi~~d-~~~lyva~~~~~~v~~~d~~~g~~~~~i~~ 247 (267)
T 1npe_A 199 PGRRKVLE------------GL-----QYPFAVTSY-GKNLYYTDWKTNSVIAMDLAISKEMDTFHP 247 (267)
T ss_dssp EEEEEEEE------------CC-----CSEEEEEEE-TTEEEEEETTTTEEEEEETTTTEEEEEECC
T ss_pred CceEEEec------------CC-----CCceEEEEe-CCEEEEEECCCCeEEEEeCCCCCceEEEcc
Confidence 44322111 00 134566654 344444444568999999999999999864
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=97.60 E-value=0.0022 Score=58.68 Aligned_cols=79 Identities=13% Similarity=0.051 Sum_probs=56.8
Q ss_pred EEEEECCCCCEEEEEeCCC-------------------cEEEEEcCCCeEEeeeeeccCCC-------cceEEEEECCCC
Q 023642 128 YVSQFSADGSLFVAGFQAS-------------------QIRIYDVERGWKIQKDILAKSLR-------WTVTDTSLSPDQ 181 (279)
Q Consensus 128 ~~~~~spd~~~l~s~~~d~-------------------~i~iwd~~~~~~~~~~~~~~~~~-------~~v~~~~~sp~~ 181 (279)
..++++|++.+++.+..++ .|..+|..+|+.+..... ..|. ....-+....+|
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~-~~~d~wd~~~~~~p~l~~~~~dG 324 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQE-TPGDNWDYTSTQPMILADIKIAG 324 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEES-STTCCSCCCCCSCCEEEEEEETT
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEec-CCCcccccccCCCcEEEecccCC
Confidence 4678999999998887654 599999999987766432 2221 122223444577
Q ss_pred ---CEEEEEeCCCeEEEEECCCCceeeee
Q 023642 182 ---RHLVYASMSPIVHIVDVGSGTMESLA 207 (279)
Q Consensus 182 ---~~l~~~~~d~~i~i~d~~~~~~~~~~ 207 (279)
..++.++.+|.++++|..+|+.+...
T Consensus 325 ~~~~~l~~~~~~G~l~~lD~~tG~~l~~~ 353 (677)
T 1kb0_A 325 KPRKVILHAPKNGFFFVLDRTNGKFISAK 353 (677)
T ss_dssp EEEEEEEECCTTSEEEEEETTTCCEEEEE
T ss_pred cEeeEEEEECCCCEEEEEECCCCCEeccc
Confidence 67889999999999999999985443
No 242
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.59 E-value=0.0015 Score=60.66 Aligned_cols=74 Identities=11% Similarity=0.018 Sum_probs=49.9
Q ss_pred EEEEECCCCCEEEEEeCC-----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC---CCeEEEEECC
Q 023642 128 YVSQFSADGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM---SPIVHIVDVG 199 (279)
Q Consensus 128 ~~~~~spd~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---d~~i~i~d~~ 199 (279)
..++|+|||+.|+....| .+|.++++.++......+...........+.|+|||++|+..+. ...|+++|+.
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~ 303 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLR 303 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESS
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 467899999988777665 36888888876421111111122234678899999999886653 3468889998
Q ss_pred CC
Q 023642 200 SG 201 (279)
Q Consensus 200 ~~ 201 (279)
++
T Consensus 304 ~~ 305 (751)
T 2xe4_A 304 KG 305 (751)
T ss_dssp SC
T ss_pred CC
Confidence 75
No 243
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.57 E-value=0.0077 Score=49.15 Aligned_cols=115 Identities=15% Similarity=0.146 Sum_probs=74.9
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC--CeEEEEECCCCc
Q 023642 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS--PIVHIVDVGSGT 202 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d--~~i~i~d~~~~~ 202 (279)
.....++|+|+++++++-..+++|..||..... .. .. .....+..+++.|+|+++++.... ..+..+|..+++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~-~~-~~---~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~ 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQ-QI-HA---TVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCE-EE-EE---ECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCce-EE-EE---eCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe
Confidence 457789999999977777788999999987642 21 11 122368899999999976655432 247777887777
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCC
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEAN 259 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~ 259 (279)
...+..... ......++..+++..+++-..++.|+++|..++
T Consensus 107 ~~~~~~~~~---------------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 107 VETLLTLPD---------------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEEECTT---------------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEeCCC---------------ccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 543322110 012344455555555555556788999998765
No 244
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.57 E-value=0.0035 Score=56.17 Aligned_cols=118 Identities=14% Similarity=0.083 Sum_probs=77.1
Q ss_pred CCCC---EEEEEeCCCcEEEEEcCCCeEEeeeeeccCC----------Ccce--------------------------EE
Q 023642 134 ADGS---LFVAGFQASQIRIYDVERGWKIQKDILAKSL----------RWTV--------------------------TD 174 (279)
Q Consensus 134 pd~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~----------~~~v--------------------------~~ 174 (279)
++|+ .++.++.+|.+.++|..+|+.+......... ..++ ..
T Consensus 311 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 390 (571)
T 2ad6_A 311 VNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGV 390 (571)
T ss_dssp ETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCC
Confidence 4674 5678889999999999999776553221100 0111 24
Q ss_pred EEECCCCCEEEEEe-------------------------------------CCCeEEEEECCCCceeeeeccccccceeE
Q 023642 175 TSLSPDQRHLVYAS-------------------------------------MSPIVHIVDVGSGTMESLANVTEIHDGLD 217 (279)
Q Consensus 175 ~~~sp~~~~l~~~~-------------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 217 (279)
++++|+..+++... .++.+..||..+++.........
T Consensus 391 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~------ 464 (571)
T 2ad6_A 391 DSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF------ 464 (571)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS------
T ss_pred ceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC------
Confidence 67888877776653 24678888888887643322110
Q ss_pred EeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 218 FSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 218 ~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
.+....+...+..++.++.|+.|+.||.++|+.+-+++..
T Consensus 465 -----------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 465 -----------AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp -----------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred -----------CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 1122222334667777899999999999999999888743
No 245
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=97.57 E-value=0.019 Score=45.61 Aligned_cols=124 Identities=9% Similarity=-0.006 Sum_probs=77.8
Q ss_pred CCCeEEEEECCCCCEEE-EEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC---CCeEEEEECC
Q 023642 124 TSRAYVSQFSADGSLFV-AGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM---SPIVHIVDVG 199 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~-s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~---d~~i~i~d~~ 199 (279)
......++++|++..|+ +-...+.|.+++++.... .... ..+ ......++++|++..|+.+.. .+.|..+++.
T Consensus 78 ~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~-~~~-~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~d 154 (267)
T 1npe_A 78 LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLF-DTG-LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMD 154 (267)
T ss_dssp CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEE-CSS-CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETT
T ss_pred CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEE-ECC-CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecC
Confidence 35678999999766554 445567999999875422 1111 112 135789999997666655554 3688888876
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEE-ecCCCeEEEEECCCCeEEEEEe
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA-GSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t-~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
......+... .-.....++++|++..|+. -...+.|.++|.........+.
T Consensus 155 g~~~~~~~~~----------------~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~ 206 (267)
T 1npe_A 155 GTNRRILAQD----------------NLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLE 206 (267)
T ss_dssp SCCCEEEECT----------------TCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEE
T ss_pred CCCcEEEEEC----------------CCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEec
Confidence 5432211110 0125788999998776654 4456799999997554433333
No 246
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=97.55 E-value=0.0016 Score=51.85 Aligned_cols=124 Identities=15% Similarity=0.102 Sum_probs=82.7
Q ss_pred CeEEEEECCCCCEEEEE-eCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCcee
Q 023642 126 RAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (279)
Q Consensus 126 ~V~~~~~spd~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~ 204 (279)
......+.+++..|... -.++.+.+||..+.+.+..+.. .. ....+++|+..|+.+..+..|.++|..+.+..
T Consensus 86 ~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~-~~-----eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~ 159 (262)
T 3nol_A 86 RYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNY-DG-----EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPV 159 (262)
T ss_dssp TCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEEC-SS-----CCCCEEECSSCEEECCSSSEEEEECTTTCSEE
T ss_pred ccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEEC-CC-----CceEEecCCCEEEEECCCCeEEEEcCCCCeEE
Confidence 44443344455566544 4578999999999987766432 22 22344467888887777889999999998875
Q ss_pred eeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
.......... --..++.+.|. +|+.++..-.+..|.+.|.++|+.+.++..
T Consensus 160 ~~I~V~~~g~-----------~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~ 210 (262)
T 3nol_A 160 RTITVTAHGE-----------ELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDL 210 (262)
T ss_dssp EEEECEETTE-----------ECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEEC
T ss_pred EEEEeccCCc-----------cccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEEC
Confidence 4433321000 00145567776 777666665688999999999999999874
No 247
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=97.47 E-value=0.0047 Score=56.65 Aligned_cols=76 Identities=14% Similarity=0.139 Sum_probs=54.8
Q ss_pred EEEECCCCCEEEEEeCCCc-------------------EEEEEcCCCeEEeeeeeccCCC-------cceEEEEECCCCC
Q 023642 129 VSQFSADGSLFVAGFQASQ-------------------IRIYDVERGWKIQKDILAKSLR-------WTVTDTSLSPDQR 182 (279)
Q Consensus 129 ~~~~spd~~~l~s~~~d~~-------------------i~iwd~~~~~~~~~~~~~~~~~-------~~v~~~~~sp~~~ 182 (279)
.++++|++.+++.+..++. |..||.++|+.+..... ..|. .++.-.....+|+
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~-~~~d~wd~~~~~~~~l~d~~~~G~ 317 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQT-TPGDAWDYTATQHMILAELPIDGK 317 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEES-STTCCSCCCCCSCEEEEEEEETTE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeec-CCcccccccCCCCcEEEeeccCCc
Confidence 5789999999999887763 99999999987765432 1121 1222223333665
Q ss_pred ---EEEEEeCCCeEEEEECCCCceee
Q 023642 183 ---HLVYASMSPIVHIVDVGSGTMES 205 (279)
Q Consensus 183 ---~l~~~~~d~~i~i~d~~~~~~~~ 205 (279)
.++.++.+|.++++|..+|+.+.
T Consensus 318 ~~~~v~~~~~~G~l~~lD~~tG~~l~ 343 (689)
T 1yiq_A 318 PRKVLMQAPKNGFFYVIDRATGELLS 343 (689)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred EEEEEEEECCCCeEEEEECCCCCEec
Confidence 78889999999999999999853
No 248
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.46 E-value=0.0018 Score=58.97 Aligned_cols=120 Identities=13% Similarity=0.106 Sum_probs=78.6
Q ss_pred EEEECC-CCCEEEEEeCCC-----------cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEE
Q 023642 129 VSQFSA-DGSLFVAGFQAS-----------QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHI 195 (279)
Q Consensus 129 ~~~~sp-d~~~l~s~~~d~-----------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i 195 (279)
.+++.| +++.++.|+.+. .+.+||..+++..........+.....++++.++++.++.|+ .+..+.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 556777 888888887543 588999988743222111122333344678889999999988 4558999
Q ss_pred EECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec-CC-----CeEEEEECCCCeEEE
Q 023642 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD-----DCIYVYDLEANKLSL 263 (279)
Q Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s-~d-----~~i~vwd~~~~~~~~ 263 (279)
||..+.+.......... -.-.+++..++|++++.|+ .+ ..+.+||..+++...
T Consensus 270 yd~~t~~W~~~~~~~~~---------------R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~ 328 (656)
T 1k3i_A 270 YDSSSDSWIPGPDMQVA---------------RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS 328 (656)
T ss_dssp EEGGGTEEEECCCCSSC---------------CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE
T ss_pred ecCcCCceeECCCCCcc---------------ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee
Confidence 99988765443221110 0123445567999999988 34 579999998876544
No 249
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.42 E-value=0.013 Score=46.69 Aligned_cols=125 Identities=10% Similarity=0.096 Sum_probs=81.4
Q ss_pred eeCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEEC
Q 023642 120 VDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~ 198 (279)
+.+-...+..++|+|++..| ++...++.|...|.. ++.+... .+.+. .....+++.+++.++++.-.++.+.++++
T Consensus 22 l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i-~l~g~-~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 22 IAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTI-PLDFV-KDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp CTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEE-ECSSC-SSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEE-ecCCC-CChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 44566789999999977655 557778899999998 7655543 23332 35889999999987777667788999988
Q ss_pred CCCceee-eeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC--eEEEEE
Q 023642 199 GSGTMES-LANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD--CIYVYD 255 (279)
Q Consensus 199 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~--~i~vwd 255 (279)
....... .... .+. ......+.....++|+|.+..|.++.... .|+.|+
T Consensus 99 ~~~~~i~~~~~~-------~~~-~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~ 150 (255)
T 3qqz_A 99 TPNSEVKILKKI-------KIP-LQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVN 150 (255)
T ss_dssp CTTCCEEEEEEE-------ECC-CSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEE
T ss_pred CCCCeeeeeeee-------ccc-cccccccCCcceEEEeCCCCEEEEEECcCCceEEEEc
Confidence 6644211 1111 010 00001233578999999987777766543 455555
No 250
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.40 E-value=0.004 Score=55.41 Aligned_cols=114 Identities=8% Similarity=0.061 Sum_probs=76.8
Q ss_pred CCeEEEEE-C-CCCCEEEEEeC------------------CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEE
Q 023642 125 SRAYVSQF-S-ADGSLFVAGFQ------------------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL 184 (279)
Q Consensus 125 ~~V~~~~~-s-pd~~~l~s~~~------------------d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l 184 (279)
.....+++ + |++.+++.+++ ++.+.+.|.++.+....+.... ....++++|||+++
T Consensus 134 ~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg----~pd~~~~spdGk~~ 209 (595)
T 1fwx_A 134 KGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG----NLDNCDADYEGKWA 209 (595)
T ss_dssp CSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS----CCCCEEECSSSSEE
T ss_pred CCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC----CccceEECCCCCEE
Confidence 45778887 5 99999988852 3579999999987766644322 24568899999999
Q ss_pred EEEeCCC---------------e-----------------------EEEEECCC--Cce-eeeeccccccceeEEeeCCC
Q 023642 185 VYASMSP---------------I-----------------------VHIVDVGS--GTM-ESLANVTEIHDGLDFSAADD 223 (279)
Q Consensus 185 ~~~~~d~---------------~-----------------------i~i~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~ 223 (279)
++.+.+. . |.+.|.++ +.. .. +-+.+
T Consensus 210 ~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~------------~Ipvg- 276 (595)
T 1fwx_A 210 FSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTR------------YIPIA- 276 (595)
T ss_dssp EEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEE------------EEEEE-
T ss_pred EEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEE------------EEecC-
Confidence 8888553 2 34444443 111 00 00000
Q ss_pred CCccccEEEEEEecCCCEEEEec-CCCeEEEEECCCC
Q 023642 224 GGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEAN 259 (279)
Q Consensus 224 ~~~~~~v~~~~~sp~g~~l~t~s-~d~~i~vwd~~~~ 259 (279)
....++.++|||++++.++ .+.+|.++|+.+.
T Consensus 277 ----~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~ 309 (595)
T 1fwx_A 277 ----NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRF 309 (595)
T ss_dssp ----SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGH
T ss_pred ----CCceEEEEcCCCCEEEEeCCCCCeEEEEECccc
Confidence 1346789999999877655 5789999999854
No 251
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.40 E-value=0.008 Score=54.90 Aligned_cols=120 Identities=14% Similarity=0.134 Sum_probs=78.5
Q ss_pred ECCCCC---EEEEEeCCCcEEEEEcCCCeEEeeeeecc---------CCCcce------------------------EEE
Q 023642 132 FSADGS---LFVAGFQASQIRIYDVERGWKIQKDILAK---------SLRWTV------------------------TDT 175 (279)
Q Consensus 132 ~spd~~---~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---------~~~~~v------------------------~~~ 175 (279)
+..+|+ .++.++.+|.+.++|..+|+.+....... ....++ ..+
T Consensus 307 ~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~ 386 (668)
T 1kv9_A 307 LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSM 386 (668)
T ss_dssp EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCC
T ss_pred eccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcc
Confidence 334665 68889999999999999998763321100 000000 126
Q ss_pred EECCCCCEEEEEe------------------------------------CCCeEEEEECCCCceeeeeccccccceeEEe
Q 023642 176 SLSPDQRHLVYAS------------------------------------MSPIVHIVDVGSGTMESLANVTEIHDGLDFS 219 (279)
Q Consensus 176 ~~sp~~~~l~~~~------------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 219 (279)
+++|+...++... .++.|..||+.+++.........
T Consensus 387 a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-------- 458 (668)
T 1kv9_A 387 SFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-------- 458 (668)
T ss_dssp EEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS--------
T ss_pred eECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC--------
Confidence 7788766655421 23779999999988754322111
Q ss_pred eCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 220 AADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 220 ~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
......+...+.+++.++.|+.|+.||.++|+.+.+++..
T Consensus 459 ---------~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 459 ---------HWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp ---------SCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ---------CCcCceeEeCCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 2222334456788888999999999999999999888754
No 252
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.38 E-value=0.011 Score=53.00 Aligned_cols=63 Identities=14% Similarity=0.167 Sum_probs=42.3
Q ss_pred CCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCC
Q 023642 190 SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHT 269 (279)
Q Consensus 190 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~ 269 (279)
++.+..||+.+++......... .+..-.....+..++.++.|+.++.||.++|+.+-+++...
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-----------------~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~~~~ 527 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-----------------PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQTGS 527 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-----------------CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSS
T ss_pred cceEEEEECCCCCEEEEecCCC-----------------CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEecCCC
Confidence 5778888998888643322110 11111122246677789999999999999999998887543
No 253
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.37 E-value=0.0051 Score=48.49 Aligned_cols=117 Identities=15% Similarity=0.041 Sum_probs=79.2
Q ss_pred ECCCCCEE-EEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccc
Q 023642 132 FSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVT 210 (279)
Q Consensus 132 ~spd~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 210 (279)
+.+++..| +..-.++.+.+||..+.+.+..+.. ... ...+.+++..|+.+..++.|.++|..+.+........
T Consensus 70 i~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~-~~~-----Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~ 143 (243)
T 3mbr_X 70 IVAWRDRLIQLTWRNHEGFVYDLATLTPRARFRY-PGE-----GWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVT 143 (243)
T ss_dssp EEEETTEEEEEESSSSEEEEEETTTTEEEEEEEC-SSC-----CCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECE
T ss_pred EEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEeC-CCC-----ceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEc
Confidence 33344544 4455688999999999987776432 222 2334467888877778999999999998875444332
Q ss_pred cccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe
Q 023642 211 EIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
..... -..++.+.|. +|+.++..-.+..|.+.|.++|+.+..+.
T Consensus 144 ~~g~~-----------~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~id 187 (243)
T 3mbr_X 144 AGGRP-----------LDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWID 187 (243)
T ss_dssp ETTEE-----------CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEE
T ss_pred cCCcc-----------cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEE
Confidence 11000 0145667765 67766665567899999999999999987
No 254
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.27 E-value=0.0032 Score=51.55 Aligned_cols=121 Identities=14% Similarity=0.083 Sum_probs=73.1
Q ss_pred eeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECC
Q 023642 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~ 199 (279)
.......+.++...+++. +..++.++.|..+|.. ++...... .....+.++.+.+++..++.. +.+..+| .
T Consensus 132 ~~~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~---~~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~ 202 (330)
T 3hxj_A 132 FKTKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFK---TNDAITSAASIGKDGTIYFGS---DKVYAIN-P 202 (330)
T ss_dssp EECSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEE---CSSCCCSCCEECTTCCEEEES---SSEEEEC-T
T ss_pred EcCCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEe---cCCCceeeeEEcCCCEEEEEe---CEEEEEC-C
Confidence 333444566677777777 5557778999999998 75554422 223356677777788765544 7789999 6
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
+++....... ....+.++...++|... .++.++.|..+|. +++.+..+..
T Consensus 203 ~g~~~~~~~~----------------~~~~~~~~~~~~~g~l~-v~t~~~gl~~~~~-~g~~~~~~~~ 252 (330)
T 3hxj_A 203 DGTEKWNFYA----------------GYWTVTRPAISEDGTIY-VTSLDGHLYAINP-DGTEKWRFKT 252 (330)
T ss_dssp TSCEEEEECC----------------SSCCCSCCEECTTSCEE-EEETTTEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEEEcc----------------CCcceeceEECCCCeEE-EEcCCCeEEEECC-CCCEeEEeeC
Confidence 6654322111 11245566667676544 3455666777763 4555555543
No 255
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.25 E-value=0.022 Score=51.25 Aligned_cols=118 Identities=14% Similarity=0.125 Sum_probs=73.9
Q ss_pred CCC---CEEEEEeCCCcEEEEEcCCCeEEeeeeecc----------CCCcce--------------------------EE
Q 023642 134 ADG---SLFVAGFQASQIRIYDVERGWKIQKDILAK----------SLRWTV--------------------------TD 174 (279)
Q Consensus 134 pd~---~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----------~~~~~v--------------------------~~ 174 (279)
.+| ..++.++.+|.+.++|..+|+.+....... ....++ ..
T Consensus 318 ~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 397 (599)
T 1w6s_A 318 KDGKARKLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGH 397 (599)
T ss_dssp TTSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCB
T ss_pred cCCcEEEEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCC
Confidence 567 467778999999999999998766532111 000111 24
Q ss_pred EEECCCCCEEEEEe---------------------------------------CCCeEEEEECCCCceeeeeccccccce
Q 023642 175 TSLSPDQRHLVYAS---------------------------------------MSPIVHIVDVGSGTMESLANVTEIHDG 215 (279)
Q Consensus 175 ~~~sp~~~~l~~~~---------------------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~ 215 (279)
++++|+..++++.. .++.+..||+.+++.........
T Consensus 398 ~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~~---- 473 (599)
T 1w6s_A 398 DSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMERF---- 473 (599)
T ss_dssp CEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEESS----
T ss_pred ccCCCCCCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCCC----
Confidence 56777766655432 23567777777776543221110
Q ss_pred eEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 216 LDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
....-.+...+..++.++.|+.|+.||.++|+.+-+++-.
T Consensus 474 -------------~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 474 -------------AVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp -------------CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred -------------CccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 1111112235667777899999999999999999888743
No 256
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.24 E-value=0.017 Score=47.33 Aligned_cols=123 Identities=15% Similarity=0.139 Sum_probs=77.3
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc-----------------CCCcceEEEEECC-CCCEEEE
Q 023642 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-----------------SLRWTVTDTSLSP-DQRHLVY 186 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-----------------~~~~~v~~~~~sp-~~~~l~~ 186 (279)
....+++|++++++++++..++.|..||..++.... ..... .....+..+++.| +++ |+.
T Consensus 19 ~~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~-l~v 96 (322)
T 2fp8_A 19 YAPNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVD-FAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQ-LYI 96 (322)
T ss_dssp SCCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEE-EEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTE-EEE
T ss_pred CCceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEE-EecccccccccccccccchhccccCCCCceEEEcCCCCc-EEE
Confidence 445678899999978888889999999987653321 11000 0012478899998 554 555
Q ss_pred EeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEec-CCCEEEEecC-----------------C
Q 023642 187 ASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSS-----------------D 248 (279)
Q Consensus 187 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~t~s~-----------------d 248 (279)
+...+.+..+|..++....+..... +. .......+++.+ +|++.++-.. +
T Consensus 97 ~d~~~~i~~~d~~~g~~~~~~~~~~---~~---------~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~ 164 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHATQLATSVD---GV---------PFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKT 164 (322)
T ss_dssp EETTTEEEEECTTCEECEEEESEET---TE---------ECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCC
T ss_pred EECCCCEEEEeCCCCEEEEecccCC---CC---------cccccceEEEecCCCEEEEECCcccccccccceehcccCCC
Confidence 5555558888877654332211100 00 012467899999 9987776432 3
Q ss_pred CeEEEEECCCCeE
Q 023642 249 DCIYVYDLEANKL 261 (279)
Q Consensus 249 ~~i~vwd~~~~~~ 261 (279)
+.|..||..+++.
T Consensus 165 g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 165 GRLIKYDPSTKET 177 (322)
T ss_dssp EEEEEEETTTTEE
T ss_pred ceEEEEeCCCCEE
Confidence 6799999877754
No 257
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.21 E-value=0.011 Score=48.42 Aligned_cols=116 Identities=11% Similarity=-0.023 Sum_probs=72.6
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccC-CCcceEEEEECC-CCCEEEEEeC------------
Q 023642 125 SRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKS-LRWTVTDTSLSP-DQRHLVYASM------------ 189 (279)
Q Consensus 125 ~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~sp-~~~~l~~~~~------------ 189 (279)
.....+++++ +++ |+.+...+.|..+|..++..........+ .......+++.| +|+.+++-..
T Consensus 80 ~~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~ 158 (322)
T 2fp8_A 80 GRTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIM 158 (322)
T ss_dssp CCEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHH
T ss_pred CCCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceeh
Confidence 3578899998 555 54454445688888776532111000111 112478899999 9987776432
Q ss_pred -----CCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEe-cCCCeEEEEECCC
Q 023642 190 -----SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEA 258 (279)
Q Consensus 190 -----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~-s~d~~i~vwd~~~ 258 (279)
++.+..||..+++....... -.....++|+|+|++|+.+ +..+.|.+|++..
T Consensus 159 ~~~~~~g~v~~~d~~~~~~~~~~~~-----------------~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 159 DTSDKTGRLIKYDPSTKETTLLLKE-----------------LHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp HHTCCCEEEEEEETTTTEEEEEEEE-----------------ESCCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred cccCCCceEEEEeCCCCEEEEeccC-----------------CccCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 36788888877764322110 0134678999999866544 5568899999874
No 258
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.15 E-value=0.041 Score=46.02 Aligned_cols=114 Identities=9% Similarity=0.076 Sum_probs=71.8
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccc
Q 023642 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHD 214 (279)
Q Consensus 135 d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 214 (279)
++..++.++.++.|..+|..+|+.+......... ...... .+..++.++.++.+..+|..+|+............
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~---~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~ 176 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEA---LSRPVV--SDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSL 176 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCC---CSCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCce---EcCCEE--ECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCce
Confidence 4567888889999999999999776553221111 111112 24577788889999999999998754332211000
Q ss_pred eeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe
Q 023642 215 GLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 215 ~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
.... . ...... +..++.++.++.|..+|..+|+.+-+..
T Consensus 177 --~~~~-----~----~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 177 --SLRG-----E----SAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp ----CC-----C----CCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEE
T ss_pred --eecC-----C----CCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence 0000 0 111122 4467778889999999999999887665
No 259
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.12 E-value=0.09 Score=43.85 Aligned_cols=114 Identities=13% Similarity=0.096 Sum_probs=74.1
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCC------CcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeec
Q 023642 135 DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSL------RWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN 208 (279)
Q Consensus 135 d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~------~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 208 (279)
++..++.++.++.|..+|..+|+.+......... ...+.. ....++..++.++.++.+..+|..+|+......
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSG-GVTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEE-EEEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCccccc-CceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 4677888888899999999999776653321110 112222 222246678888899999999999998754322
Q ss_pred cccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 209 VTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
..... ...+ ... +..++.++.++.|+.+|..+|+.+-++..
T Consensus 131 ~~~~~------------~~~p----~~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~ 171 (376)
T 3q7m_A 131 VAGEA------------LSRP----VVS--DGLVLIHTSNGQLQALNEADGAVKWTVNL 171 (376)
T ss_dssp CSSCC------------CSCC----EEE--TTEEEEECTTSEEEEEETTTCCEEEEEEC
T ss_pred CCCce------------EcCC----EEE--CCEEEEEcCCCeEEEEECCCCcEEEEEeC
Confidence 21100 1111 122 44677788899999999999998877764
No 260
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.07 E-value=0.026 Score=48.57 Aligned_cols=119 Identities=14% Similarity=0.108 Sum_probs=73.2
Q ss_pred eeCCCCCeEEEEECCCCCEEEEEeC-CC----cEEEEEcCCCeE-EeeeeeccCCCcceEEEEECC-CCCEEEEEeCCCe
Q 023642 120 VDQTTSRAYVSQFSADGSLFVAGFQ-AS----QIRIYDVERGWK-IQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPI 192 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l~s~~~-d~----~i~iwd~~~~~~-~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~ 192 (279)
+.........++|++++++|+.+.. ++ .+.+++...... ..... . ......++++| ++.++++-..++.
T Consensus 174 ~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~---~-~~~p~giavdp~~g~lyv~d~~~~~ 249 (430)
T 3tc9_A 174 VYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGFKVITELT---K-GQNCNGAETHPINGELYFNSWNAGQ 249 (430)
T ss_dssp EECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEE---E-CSSCCCEEECTTTCCEEEEETTTTE
T ss_pred EecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCceeeeeeec---c-CCCceEEEEeCCCCEEEEEECCCCE
Confidence 3345566889999999996665543 22 233344332211 11111 1 12367789999 6666666667889
Q ss_pred EEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEE-EecCCCeEEEEECC
Q 023642 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLE 257 (279)
Q Consensus 193 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~-t~s~d~~i~vwd~~ 257 (279)
|..++..++....+.... .......++|+|+|++|+ +-...+.|..++..
T Consensus 250 V~~~~~~~~~~~~~~~~~---------------~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 250 VFRYDFTTQETTPLFTIQ---------------DSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEETTTTEEEEEEECS---------------SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEECCCCcEEEEEEcC---------------CCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 999999876542221110 012567899999999544 44567789998765
No 261
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=97.06 E-value=0.0068 Score=49.52 Aligned_cols=114 Identities=10% Similarity=0.036 Sum_probs=72.8
Q ss_pred CCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccce
Q 023642 136 GSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDG 215 (279)
Q Consensus 136 ~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 215 (279)
+..+..++.++.|..+|.. +....... .....+.++...+++. +..++.++.+..||.. ++.......
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~---~~~~~~~~~~~~~~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~------ 174 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFK---TKKAIYATPIVSEDGT-IYVGSNDNYLYAINPD-GTEKWRFKT------ 174 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEE---CSSCCCSCCEECTTSC-EEEECTTSEEEEECTT-SCEEEEEEC------
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEc---CCCceeeeeEEcCCCE-EEEEcCCCEEEEECCC-CCEeEEEec------
Confidence 5567778888999999988 65544322 2233456667777776 5556778899999998 665322211
Q ss_pred eEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCCCcceeEE
Q 023642 216 LDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAHTVNIALW 275 (279)
Q Consensus 216 ~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~v 275 (279)
....+.++.+.+++..++.. +.|..+| .+++.+..+......+.++
T Consensus 175 ----------~~~~~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~ 220 (330)
T 3hxj_A 175 ----------NDAITSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRP 220 (330)
T ss_dssp ----------SSCCCSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCC
T ss_pred ----------CCCceeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceece
Confidence 01145556677777765544 7799999 7777776666444444433
No 262
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.01 E-value=0.015 Score=47.91 Aligned_cols=121 Identities=15% Similarity=0.191 Sum_probs=81.7
Q ss_pred CeEEEEE---CCCCCEEEEEe-------------CCCcEEEEEcC---CCeEEeeeeeccC-----------CCcceEEE
Q 023642 126 RAYVSQF---SADGSLFVAGF-------------QASQIRIYDVE---RGWKIQKDILAKS-----------LRWTVTDT 175 (279)
Q Consensus 126 ~V~~~~~---spd~~~l~s~~-------------~d~~i~iwd~~---~~~~~~~~~~~~~-----------~~~~v~~~ 175 (279)
.+..+.| .|+++++++.. .+..|..||+. +++.+... .+.. -.....++
T Consensus 64 ~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~-dL~~~~~~~~~~~g~~~~~~nDv 142 (334)
T 2p9w_A 64 QMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSV-NFEKVQDEFEKKAGKRPFGVVQS 142 (334)
T ss_dssp EEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEE-ESHHHHHHHHHHHSSCCEEEEEE
T ss_pred eeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEe-cCccccccccccccccccCCcee
Confidence 4589999 68988887644 26789999999 77554332 1111 11247899
Q ss_pred EECCCCCEEEEEeCC-CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEE
Q 023642 176 SLSPDQRHLVYASMS-PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVY 254 (279)
Q Consensus 176 ~~sp~~~~l~~~~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vw 254 (279)
+..++|+..++++.. +.|..++........... ... ........+.++++|+|..|+.....+.|..+
T Consensus 143 avD~~GnaYVt~s~~~~~I~rV~pdG~~~~~~~~-~~~----------~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~f 211 (334)
T 2p9w_A 143 AQDRDGNSYVAFALGMPAIARVSADGKTVSTFAW-ESG----------NGGQRPGYSGITFDPHSNKLIAFGGPRALTAF 211 (334)
T ss_dssp EECTTSCEEEEEEESSCEEEEECTTSCCEEEEEE-CCC----------CSSSCCSCSEEEEETTTTEEEEESSSSSEEEE
T ss_pred EECCCCCEEEeCCCCCCeEEEEeCCCCEEeeeee-cCC----------CcccccCcceEEEeCCCCEEEEEcCCCeEEEE
Confidence 999999999998888 887777776543321111 000 00011246789999999988877669999999
Q ss_pred ECCC
Q 023642 255 DLEA 258 (279)
Q Consensus 255 d~~~ 258 (279)
|+.+
T Consensus 212 D~~~ 215 (334)
T 2p9w_A 212 DVSK 215 (334)
T ss_dssp ECSS
T ss_pred cCCC
Confidence 9874
No 263
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=96.83 E-value=0.17 Score=42.80 Aligned_cols=125 Identities=6% Similarity=-0.037 Sum_probs=78.4
Q ss_pred CCCCeEEEEECCCCCEEEEEe-CC-CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEECC
Q 023642 123 TTSRAYVSQFSADGSLFVAGF-QA-SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVG 199 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l~s~~-~d-~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~ 199 (279)
.......++++|.+..|+.+. .. +.|..++++..... .+ ....-.....++|+|++..|+.+. ..+.|..+|+.
T Consensus 200 ~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~--~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~d 276 (386)
T 3v65_B 200 SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-II--ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLD 276 (386)
T ss_dssp SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EE--ECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTT
T ss_pred CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcE-EE--EECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCC
Confidence 346678999999766655443 44 68888888754221 11 112223478999998777665554 56789999987
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
......+... .......+++ ..+..+++-...+.|..+|..+|+.+..+..
T Consensus 277 G~~~~~~~~~----------------~~~~P~giav-~~~~ly~td~~~~~V~~~~~~~G~~~~~i~~ 327 (386)
T 3v65_B 277 GSHRKAVISQ----------------GLPHPFAITV-FEDSLYWTDWHTKSINSANKFTGKNQEIIRN 327 (386)
T ss_dssp SCSCEEEECS----------------SCSSEEEEEE-ETTEEEEEETTTTEEEEEETTTCCSCEEEEC
T ss_pred CCeeEEEEEC----------------CCCCceEEEE-ECCEEEEeeCCCCeEEEEECCCCcceEEEcc
Confidence 6443322211 0124567777 3455566666778899999777776666653
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=96.80 E-value=0.063 Score=46.18 Aligned_cols=117 Identities=9% Similarity=0.090 Sum_probs=72.6
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-C----eEEEEEC
Q 023642 125 SRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-P----IVHIVDV 198 (279)
Q Consensus 125 ~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-~----~i~i~d~ 198 (279)
.....++|+| ++..|..+...+.|+.+|+..+... .+. ........++|++++++|+.+... + .+.+++.
T Consensus 137 ~~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~-~~~---~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~ 212 (430)
T 3tc9_A 137 GGAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVS-TVY---SGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTR 212 (430)
T ss_dssp SCCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEE-EEE---CCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEG
T ss_pred CCCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEE-EEe---cCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeC
Confidence 4557889998 4666666655589999999877432 211 233458899999999976666542 1 3333443
Q ss_pred CCCceeeeeccccccceeEEeeCCCCCccccEEEEEEec-CCCEEEEecCCCeEEEEECCCCeE
Q 023642 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFST-DGRELVAGSSDDCIYVYDLEANKL 261 (279)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~g~~l~t~s~d~~i~vwd~~~~~~ 261 (279)
. +...... .+.. . .....++++| +|.++++-..++.|..++..++..
T Consensus 213 ~-g~~~~~~---------~l~~-~-----~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 213 E-SGFKVIT---------ELTK-G-----QNCNGAETHPINGELYFNSWNAGQVFRYDFTTQET 260 (430)
T ss_dssp G-GTSCSEE---------EEEE-C-----SSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEE
T ss_pred C-Cceeeee---------eecc-C-----CCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcE
Confidence 2 2221000 0000 0 1356688999 677776666778899999887654
No 265
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.78 E-value=0.18 Score=41.88 Aligned_cols=125 Identities=6% Similarity=0.005 Sum_probs=77.8
Q ss_pred CCCCCeEEEEECCCCCEEE-EEeCC-CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEEC
Q 023642 122 QTTSRAYVSQFSADGSLFV-AGFQA-SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDV 198 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~-s~~~d-~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~ 198 (279)
........++++|.+..|+ +-... +.|..++++..... .+ ....-.....++++|++..|+.+. ..+.|..+|+
T Consensus 156 ~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~--~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~ 232 (349)
T 3v64_C 156 QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRR-II--ADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANL 232 (349)
T ss_dssp TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-ES--CCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcE-EE--EECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeC
Confidence 3445678999999666554 44444 78888888754221 11 112223478999999777666554 5678999998
Q ss_pred CCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe
Q 023642 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
.......+... .......+++. .+..+++-...+.|..+|..+|+.+..+.
T Consensus 233 dG~~~~~~~~~----------------~~~~P~giav~-~~~ly~td~~~~~V~~~~~~~G~~~~~i~ 283 (349)
T 3v64_C 233 DGSHRKAVISQ----------------GLPHPFAITVF-EDSLYWTDWHTKSINSANKFTGKNQEIIR 283 (349)
T ss_dssp TSCSCEEEECS----------------SCSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCceEEEEeC----------------CCCCceEEEEE-CCEEEEecCCCCeEEEEEccCCCccEEec
Confidence 76443322211 01245677773 45555566667889999876776665554
No 266
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.67 E-value=0.22 Score=41.40 Aligned_cols=124 Identities=18% Similarity=0.228 Sum_probs=82.4
Q ss_pred CCeEEEEE--CCC-CC-EEEEEeCCCcEEEEEcC---CC----eEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeE
Q 023642 125 SRAYVSQF--SAD-GS-LFVAGFQASQIRIYDVE---RG----WKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIV 193 (279)
Q Consensus 125 ~~V~~~~~--spd-~~-~l~s~~~d~~i~iwd~~---~~----~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i 193 (279)
..++.+++ +|. +. +++....++.+..|++. .+ +.++.+ ...+.+..+...+....|+.+-.+.-|
T Consensus 128 ~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f----~lgsq~EgcvvDd~~g~Lyv~eEd~GI 203 (355)
T 3amr_A 128 NEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAF----KMNSQTEGMAADDEYGRLYIAEEDEAI 203 (355)
T ss_dssp SSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEE----ECSSCEEEEEEETTTTEEEEEETTTEE
T ss_pred CCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEe----cCCCCcceEEEcCCCCeEEEecccceE
Confidence 56777887 774 44 57788888999999883 33 233332 223468899999999999999999878
Q ss_pred EEEECCC-----CceeeeeccccccceeEEeeCCCCCccccEEEEEE--ecCCC-EEEEec-CCCeEEEEECC-CCeEEE
Q 023642 194 HIVDVGS-----GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF--STDGR-ELVAGS-SDDCIYVYDLE-ANKLSL 263 (279)
Q Consensus 194 ~i~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~g~-~l~t~s-~d~~i~vwd~~-~~~~~~ 263 (279)
..|+... ++........ .-...+..+++ .++++ +|++++ .+.++.+||.. +.+.+.
T Consensus 204 w~~da~p~~~~~~~~v~~~~~g--------------~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg 269 (355)
T 3amr_A 204 WKFSAEPDGGSNGTVIDRADGR--------------HLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVA 269 (355)
T ss_dssp EEEECSTTSCSCCEEEEEBSSS--------------SBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEE
T ss_pred EEEeCCcCCCCCceEEEEecCC--------------ccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEE
Confidence 8888552 2221111000 01225777777 45556 666555 57799999997 677888
Q ss_pred EEe
Q 023642 264 RIL 266 (279)
Q Consensus 264 ~~~ 266 (279)
.|.
T Consensus 270 ~f~ 272 (355)
T 3amr_A 270 DFR 272 (355)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 267
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=96.67 E-value=0.22 Score=41.39 Aligned_cols=116 Identities=11% Similarity=0.083 Sum_probs=73.3
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CC-CeEEEEECCCC
Q 023642 125 SRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MS-PIVHIVDVGSG 201 (279)
Q Consensus 125 ~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d-~~i~i~d~~~~ 201 (279)
.....+++.+.+. ++++-...+.|.+.+++..... . . ....-....+++++|.+..|+... .. +.|..+++...
T Consensus 116 ~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~-l-~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~ 192 (349)
T 3v64_C 116 ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRK-V-L-LWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS 192 (349)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-E-E-ECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceE-E-E-EeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCC
Confidence 4557899998555 4455566789999998755321 1 1 122223578999999766665554 44 77888888764
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEe-cCCCeEEEEECCCC
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEAN 259 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~-s~d~~i~vwd~~~~ 259 (279)
....+... .-.....++|+|++..|+.+ +..+.|..+|+...
T Consensus 193 ~~~~~~~~----------------~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 193 GRRIIADT----------------HLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp SCEESCCS----------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CcEEEEEC----------------CCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 43322110 11257889999876665544 45678999998643
No 268
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=96.67 E-value=0.034 Score=50.76 Aligned_cols=116 Identities=17% Similarity=0.169 Sum_probs=73.8
Q ss_pred CCcEEEEEcCCCeEEeeeeeccCC----------------------------CcceEEEEECCCCCEEEEEeCCC-----
Q 023642 145 ASQIRIYDVERGWKIQKDILAKSL----------------------------RWTVTDTSLSPDQRHLVYASMSP----- 191 (279)
Q Consensus 145 d~~i~iwd~~~~~~~~~~~~~~~~----------------------------~~~v~~~~~sp~~~~l~~~~~d~----- 191 (279)
++.|..+|..+|+.+......... ......+++.|+...++.+..++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 589999999999877664321110 00112468888888888887766
Q ss_pred --------------eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCC---EEEEecCCCeEEEE
Q 023642 192 --------------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR---ELVAGSSDDCIYVY 254 (279)
Q Consensus 192 --------------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~---~l~t~s~d~~i~vw 254 (279)
.|..+|..+|+.+....... +....+. .........+..+|+ .++.++.++.++++
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~-~~~wd~~------~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~l 329 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTP-GDSWDFT------ATQQITLAELNIDGKPRKVLMQAPKNGFFYVL 329 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST-TCCSCCC------CCSCEEEEEEEETTEEEEEEEECCTTSEEEEE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCC-Ccccccc------CCCCcEEEEeccCCcEEEEEEEECCCCEEEEE
Confidence 39999999999754433211 1000000 001222233334675 68889999999999
Q ss_pred ECCCCeEEEEEeC
Q 023642 255 DLEANKLSLRILA 267 (279)
Q Consensus 255 d~~~~~~~~~~~~ 267 (279)
|..+|+.+...+.
T Consensus 330 D~~tG~~l~~~~~ 342 (668)
T 1kv9_A 330 DRTNGKLISAEKF 342 (668)
T ss_dssp ETTTCCEEEEEES
T ss_pred ECCCCCEeccccc
Confidence 9999999866553
No 269
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.48 E-value=0.075 Score=45.74 Aligned_cols=120 Identities=14% Similarity=0.217 Sum_probs=70.0
Q ss_pred eeCCCCCeEEEEECCCCCEEEEEeCC---Cc-EEEEEcCCCeEEeeeeeccCCCcceEEEEECC-CCCEEEEEeCCCeEE
Q 023642 120 VDQTTSRAYVSQFSADGSLFVAGFQA---SQ-IRIYDVERGWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMSPIVH 194 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l~s~~~d---~~-i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d~~i~ 194 (279)
+.........++|+++|+++++-... .. +...+...+....... . .......++++| ++.++++-..++.|+
T Consensus 177 ~~~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~--~-~~~~P~giavd~~~G~lyv~d~~~~~V~ 253 (433)
T 4hw6_A 177 KTTNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASGFTERLSL--C-NARGAKTCAVHPQNGKIYYTRYHHAMIS 253 (433)
T ss_dssp ECCCCSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGTTCCEEEE--E-ECSSBCCCEECTTTCCEEECBTTCSEEE
T ss_pred eecCCCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCCeeccccc--c-ccCCCCEEEEeCCCCeEEEEECCCCEEE
Confidence 33445668999999999955544321 12 3333332221100111 1 112356789999 666666666778999
Q ss_pred EEECCCCce-eeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEE-EecCCCeEEEEECC
Q 023642 195 IVDVGSGTM-ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELV-AGSSDDCIYVYDLE 257 (279)
Q Consensus 195 i~d~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~-t~s~d~~i~vwd~~ 257 (279)
.+|..++.. ..+.... .......++|+|+|++|+ +-...+.|+.++..
T Consensus 254 ~~d~~~g~~~~~~~~~~---------------~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 254 SYDPATGTLTEEEVMMD---------------TKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EECTTTCCEEEEEEECS---------------CCSSCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEECCCCeEEEEEeccC---------------CCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 999987765 2221110 011345799999998554 44557799998865
No 270
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.39 E-value=0.57 Score=43.47 Aligned_cols=124 Identities=8% Similarity=0.092 Sum_probs=82.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeec-----cCCCcceEEEEECCCCCEEEEEeCCCeEEEEEC
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA-----KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDV 198 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-----~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~ 198 (279)
...|.++...++|.+. .|+.++-|..||..++....-.... .-....|.++...++++.|..|..++-+.+||.
T Consensus 356 ~~~V~~i~~d~~g~lW-iGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLW-IGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp CSSEEEEEECTTSCEE-EEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred CCeeEEEEECCCCCEE-EEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 4569999999988744 5777777999998876443221100 011346899999888885666777677999999
Q ss_pred CCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEE
Q 023642 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLS 262 (279)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~ 262 (279)
.+++.......... .....|.++...++|.+.+... + -|..||..+++..
T Consensus 435 ~~~~~~~~~~~~~~------------l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~~~ 484 (795)
T 4a2l_A 435 NSGQVENFNQRNSQ------------LVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRSFT 484 (795)
T ss_dssp TTCCEEEECTTTSC------------CSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTEEE
T ss_pred CCCcEEEeecCCCC------------cCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCeEE
Confidence 88876443221000 0223789999888888665443 4 4899998877543
No 271
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.37 E-value=0.13 Score=40.76 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=74.2
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCC---CeEEeeeee----ccCCCcceEEEEECCCCC-EEEEEeCCCeEEE
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVER---GWKIQKDIL----AKSLRWTVTDTSLSPDQR-HLVYASMSPIVHI 195 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~---~~~~~~~~~----~~~~~~~v~~~~~sp~~~-~l~~~~~d~~i~i 195 (279)
......++|+|+++.|.++.+.....+|.+.. ...+..... ...+...+.+++++|... +++....++.+.+
T Consensus 120 N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~ 199 (255)
T 3qqz_A 120 NCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQE 199 (255)
T ss_dssp SSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEE
T ss_pred cCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEE
Confidence 45579999999998887777666656665541 111111100 011223578999999654 5556667788899
Q ss_pred EECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECC
Q 023642 196 VDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLE 257 (279)
Q Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~ 257 (279)
+|.... ............+. .. --...-.|+|.++|+.+++ ++.+.++++.-.
T Consensus 200 ~d~~g~-~~~~~~L~~g~~~l--~~-----~~~qpEGia~d~~G~lyIv-sE~n~~y~f~~~ 252 (255)
T 3qqz_A 200 VTLVGE-VIGEMSLTKGSRGL--SH-----NIKQAEGVAMDASGNIYIV-SEPNRFYRFTPQ 252 (255)
T ss_dssp ECTTCC-EEEEEECSTTGGGC--SS-----CCCSEEEEEECTTCCEEEE-ETTTEEEEEEC-
T ss_pred EcCCCC-EEEEEEcCCccCCc--cc-----ccCCCCeeEECCCCCEEEE-cCCceEEEEEec
Confidence 997654 44333333221110 00 0126788999999985555 777777777643
No 272
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.34 E-value=0.58 Score=43.52 Aligned_cols=124 Identities=7% Similarity=-0.049 Sum_probs=73.4
Q ss_pred eeCCCCCeEEEEECCCCCE-EEEEeCCCcEEEEEcCCCeEE-eeeeeccCCCcceEEEEECCCCCEEEE-EeCCCeEEEE
Q 023642 120 VDQTTSRAYVSQFSADGSL-FVAGFQASQIRIYDVERGWKI-QKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIV 196 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~-l~s~~~d~~i~iwd~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~i~ 196 (279)
+......+..++|++.... +++-...+.|+.+++...... ...............|++.+.++.|+. -...+.|.+.
T Consensus 419 l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~ 498 (791)
T 3m0c_C 419 LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVA 498 (791)
T ss_dssp EECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred eecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEE
Confidence 4445567889999985554 455556678999998753110 001112222335778999987765554 4467899999
Q ss_pred ECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC--CCeEEEEECCCC
Q 023642 197 DVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLEAN 259 (279)
Q Consensus 197 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~--d~~i~vwd~~~~ 259 (279)
++.+.....+... .-.....|++.|.+.+|+.... ...|.+.++...
T Consensus 499 ~ldG~~~~~l~~~----------------~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~ 547 (791)
T 3m0c_C 499 DTKGVKRKTLFRE----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 547 (791)
T ss_dssp ETTSSSEEEEEEC----------------TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred eCCCCeEEEEEeC----------------CCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCC
Confidence 9986654333211 1114678888887555554432 267888887643
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.34 E-value=0.41 Score=40.61 Aligned_cols=128 Identities=9% Similarity=-0.014 Sum_probs=79.7
Q ss_pred CCCCeEEEEECCCCCEEEEEe--CCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEECC
Q 023642 123 TTSRAYVSQFSADGSLFVAGF--QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVG 199 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~ 199 (279)
.......++++|.+.+|+.+. ..+.|...+++....... ....-.....++++|++..|+.+. ..+.|..+|+.
T Consensus 200 ~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~~~~~~---~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~d 276 (400)
T 3p5b_L 200 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYSL---VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 276 (400)
T ss_dssp SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSCSCEEE---ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCCccEEE---EECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCC
Confidence 445578999999766665544 237888888875432211 112223578999999887776665 56789999987
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
......+..... .......+++. .+..+++-...+.|..+|..+|+.+..+...
T Consensus 277 G~~~~~~~~~~~--------------~l~~P~gl~v~-~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~ 330 (400)
T 3p5b_L 277 GGNRKTILEDEK--------------RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAEN 330 (400)
T ss_dssp SCCCEEEEECSS--------------TTSSEEEEEEE-TTEEEEEESSSCSEEEEESSSCCCCEEEECS
T ss_pred CCccEEEEeCCC--------------CCCCCEEEEEe-CCEEEEecCCCCeEEEEEcCCCCceEEEecC
Confidence 655433221100 11245567763 3445556666778999998788766666543
No 274
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.23 E-value=0.12 Score=43.06 Aligned_cols=113 Identities=15% Similarity=0.097 Sum_probs=62.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEE--eeeeeccCCCcceEEEEECCC---CCEEEEEeC-C-----Ce
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKI--QKDILAKSLRWTVTDTSLSPD---QRHLVYASM-S-----PI 192 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~--~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~-d-----~~ 192 (279)
-..-..++|.|||+++++ ..++.|.+++ .+... ...............++|+|+ +..|+.+.. . ..
T Consensus 30 l~~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 30 LEVPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CSCEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CCCceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 445678999999996555 5669999998 44321 111111122346889999998 555544332 2 56
Q ss_pred EEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec
Q 023642 193 VHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (279)
Q Consensus 193 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s 246 (279)
|..|+...+.......... .+.......| ....++|.|||.++++.+
T Consensus 107 v~r~~~~~~~~~~~~~l~~-----~~p~~~~~~h--~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLD-----GIPARPHGLH--SGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEECSSCEEEEEEEEE-----EECCCTTCCC--CCCCEEECTTSCEEEECC
T ss_pred EEEEEeCCCCcCceEEEEE-----eCCCCCCCCc--CCceEEECCCCCEEEEEC
Confidence 7788876543211100000 0110001113 235799999998776643
No 275
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.21 E-value=0.16 Score=41.79 Aligned_cols=128 Identities=13% Similarity=0.153 Sum_probs=76.8
Q ss_pred CCeEEEEECCCCCEEEEEe-CCCcEEEEEcCCCeEEeeeeeccC------CCcceEEEEE---CCCCCEEEEEe------
Q 023642 125 SRAYVSQFSADGSLFVAGF-QASQIRIYDVERGWKIQKDILAKS------LRWTVTDTSL---SPDQRHLVYAS------ 188 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~-~d~~i~iwd~~~~~~~~~~~~~~~------~~~~v~~~~~---sp~~~~l~~~~------ 188 (279)
---.+++|++....|..++ ..++|..||...+..... ...+ ....+..+.| .|+++++++..
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~--~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~ 90 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV--VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFN 90 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE--CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTC
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE--ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccc
Confidence 3345688988555555555 789999999986633322 1221 1124689999 69988877544
Q ss_pred -------CCCeEEEEECC---CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC-CeEEEEECC
Q 023642 189 -------MSPIVHIVDVG---SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-DCIYVYDLE 257 (279)
Q Consensus 189 -------~d~~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d-~~i~vwd~~ 257 (279)
.+..+..||+. +++............+ +..... .-......++..++|+..++++.. +.|...+..
T Consensus 91 ~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~--~~~~~g-~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~pd 167 (334)
T 2p9w_A 91 FADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDE--FEKKAG-KRPFGVVQSAQDRDGNSYVAFALGMPAIARVSAD 167 (334)
T ss_dssp TTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHH--HHHHHS-SCCEEEEEEEECTTSCEEEEEEESSCEEEEECTT
T ss_pred ccccccCCCCEEEEEcCCcCCCCCEEEEecCcccccc--cccccc-ccccCCceeEECCCCCEEEeCCCCCCeEEEEeCC
Confidence 26789999999 6765433332111100 000000 000247788889999988887777 766666654
No 276
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=96.20 E-value=0.4 Score=39.13 Aligned_cols=127 Identities=9% Similarity=-0.023 Sum_probs=79.3
Q ss_pred CCCCeEEEEECCCCCEEEEEeC-C-CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEECC
Q 023642 123 TTSRAYVSQFSADGSLFVAGFQ-A-SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDVG 199 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l~s~~~-d-~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~ 199 (279)
.......++++|.+..|+.+.. . +.|...+++.... ..+. ...-.....++++|++..|+.+. ..+.|..+|+.
T Consensus 118 ~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~~-~~~~--~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~d 194 (316)
T 1ijq_A 118 NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLV--TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVN 194 (316)
T ss_dssp TTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEE--CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCCe-EEEE--ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecC
Confidence 3456789999996665554443 2 6888888864422 2111 12223578999999877766555 56789999997
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
+.....+..... .-.....+++. .+..+++-...+.|..+|..+|+.+..+..
T Consensus 195 g~~~~~~~~~~~--------------~~~~P~giav~-~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 195 GGNRKTILEDEK--------------RLAHPFSLAVF-EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp SCSCEEEEECTT--------------TTSSEEEEEEE-TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred CCceEEEeecCC--------------ccCCcEEEEEE-CCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 644332211100 11245677775 455556666678999999877776666653
No 277
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.19 E-value=0.073 Score=44.47 Aligned_cols=112 Identities=12% Similarity=0.094 Sum_probs=62.0
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCe-EEeeeeeccCCCcceEEEEECCC---CCEEEEEeC----C----C
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGW-KIQKDILAKSLRWTVTDTSLSPD---QRHLVYASM----S----P 191 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~v~~~~~sp~---~~~l~~~~~----d----~ 191 (279)
-..-..++|.|||+++++ ..++.|+++| ..+. .+...............++|+|+ +..|+.+.. + .
T Consensus 28 l~~P~~ia~~pdG~l~V~-e~~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~ 105 (354)
T 3a9g_A 28 LEVPWSIAPLGGGRYLVT-ERPGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRN 105 (354)
T ss_dssp CSCEEEEEEEETTEEEEE-ETTTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEE
T ss_pred CCCCeEEEEcCCCeEEEE-eCCCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcce
Confidence 355688999999985554 5569999997 3454 11111011122345889999998 445444332 3 5
Q ss_pred eEEEEECCCCc--eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec
Q 023642 192 IVHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (279)
Q Consensus 192 ~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s 246 (279)
.|..|+..... ....... ... +.. ...| ....++|.|||.++++.+
T Consensus 106 ~v~r~~~~~~~~~~~~~~~l---~~~--~~~--~~~h--~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 106 RVIRGRLDGSTFKLKEVKTL---IDG--IPG--AYIH--NGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEECSSSCCEEEEEEE---EEE--EEC--CSSC--CCCCEEECTTSCEEEECC
T ss_pred EEEEEEECCCCcCcCccEEE---EEc--CCC--CCCc--CCceEEECCCCcEEEEEC
Confidence 67777776541 1100000 000 111 1113 245789999998777643
No 278
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=96.11 E-value=0.23 Score=41.33 Aligned_cols=121 Identities=15% Similarity=0.098 Sum_probs=67.3
Q ss_pred eeCCCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeee-e--eccCCCcceEEEEECCC---CCEEEEE-e--CC
Q 023642 120 VDQTTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD-I--LAKSLRWTVTDTSLSPD---QRHLVYA-S--MS 190 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~-~--~~~~~~~~v~~~~~sp~---~~~l~~~-~--~d 190 (279)
+...-..-..++|.|||+++++--..|+|++++...+...... . ...........++|+|+ +..|+.. + .+
T Consensus 27 va~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~ 106 (347)
T 3das_A 27 VATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASD 106 (347)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSS
T ss_pred eecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCC
Confidence 3444566789999999998877765899999987666432110 0 11223456899999996 3444332 2 34
Q ss_pred CeEEEEECCCCce--eeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec
Q 023642 191 PIVHIVDVGSGTM--ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (279)
Q Consensus 191 ~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s 246 (279)
..|.-|.+..+.. ..+......... + +. ...| ....+.|.|||.++++.+
T Consensus 107 ~~v~R~~~~~~~~~~~~~~~~~~i~~~--~-p~-~~~H--~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 107 NRIVRMLYDEKKPSGEQLGAPDTVFRG--I-PK-GVIH--NGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEEEEEBCTTSCTTCCBCCCEEEEEE--E-CC-CSSC--CCCCEEECTTSCEEEECB
T ss_pred CEEEEEEeCCCCcccccCCCcEEEEEc--C-CC-CCCc--cCccccCCCCCCEEEEEC
Confidence 4566666654221 000000000000 1 11 1124 346799999998877744
No 279
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.11 E-value=0.33 Score=41.69 Aligned_cols=139 Identities=12% Similarity=0.116 Sum_probs=79.1
Q ss_pred CCeEEEEECC-CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEE-eCCCeEEEEECCC--
Q 023642 125 SRAYVSQFSA-DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA-SMSPIVHIVDVGS-- 200 (279)
Q Consensus 125 ~~V~~~~~sp-d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~-~~d~~i~i~d~~~-- 200 (279)
.....++++| ++.++++-..++.|+.+|..++........... ...-..++|+|++++|+.+ ...+.|+.++...
T Consensus 228 ~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~-~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~~ 306 (433)
T 4hw6_A 228 RGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT-KGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRET 306 (433)
T ss_dssp SSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC-CSSCEEEEECTTSSEEEEEETTTTEEEEEEBCTTT
T ss_pred CCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC-CCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCCC
Confidence 3446688999 777766766778999999987754222222212 2223579999999965554 4568899988653
Q ss_pred Cceeeeecccc--ccceeEEeeCCCCCccccEEEEEE---------ecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 201 GTMESLANVTE--IHDGLDFSAADDGGYSFGIFSLKF---------STDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 201 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~---------sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
+.......... ...+.. .+......-.....+++ .++|.++++-...+.|+.++. +| .+.++.+
T Consensus 307 ~~~~~~~~~ag~~g~~g~~-dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~-~G-~v~t~~G 381 (433)
T 4hw6_A 307 GKLAVPYIVCGQHSSPGWV-DGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTP-EG-RVTTYAG 381 (433)
T ss_dssp CCBCCCEEEEECTTCCCCB-CEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECT-TS-EEEEEEC
T ss_pred cccCcEEEEEecCCCCccC-CCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECC-CC-CEEEEEe
Confidence 32110000000 000000 00000001124678999 677777777777789999985 56 4445543
No 280
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=96.04 E-value=0.71 Score=42.80 Aligned_cols=124 Identities=12% Similarity=0.066 Sum_probs=81.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeee-ccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDIL-AKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~ 202 (279)
...|.++...+++++|..|+.++-|.+||..+++...-... .......|.++...++|++.+... + -+.+||..+++
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~-Gl~~~~~~~~~ 482 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTL-S-ALVRFNPEQRS 482 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEES-S-CEEEEETTTTE
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEec-C-ceeEEeCCCCe
Confidence 35789999999998677778777899999988754322100 001234689999998888766554 4 48889988776
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeE
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~ 261 (279)
......... ... -....|.++...++|.+.+... +-|..||..+++.
T Consensus 483 ~~~~~~~~~-~~~---------~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 483 FTTIEKEKD-GTP---------VVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI 529 (795)
T ss_dssp EEECCBCTT-CCB---------CCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE
T ss_pred EEEcccccc-ccc---------cCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE
Confidence 543221100 000 0123789999999988766544 4488999877765
No 281
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=95.90 E-value=0.68 Score=39.23 Aligned_cols=121 Identities=7% Similarity=-0.076 Sum_probs=71.7
Q ss_pred eeCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCe---EEeeeeeccCCCcceEEEEECCCCCEE-EEEeCCCeEE
Q 023642 120 VDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGW---KIQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVH 194 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l-~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~ 194 (279)
+......+..++|++.+..| ++-...+.|+.+++.... .... ...........+++.+.+..| ++-...+.|.
T Consensus 107 ~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~--~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~ 184 (400)
T 3p5b_L 107 LIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDT--VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 184 (400)
T ss_dssp EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEE--EECSSCSCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred eccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceE--EEeCCCCCcccEEEEecCCceEEEECCCCeEE
Confidence 44456778999999866555 454566889999987521 1111 112223357889999855544 4555678899
Q ss_pred EEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec-C-CCeEEEEECCC
Q 023642 195 IVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-S-DDCIYVYDLEA 258 (279)
Q Consensus 195 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s-~-d~~i~vwd~~~ 258 (279)
+.++.+.....+... .-.....+++.|.+.+|+... . .+.|...++..
T Consensus 185 ~~~~~g~~~~~l~~~----------------~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG 234 (400)
T 3p5b_L 185 VADTKGVKRKTLFRE----------------NGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 234 (400)
T ss_dssp EECTTTCSEEEEEEC----------------SSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTS
T ss_pred EEeCCCCceEEEEeC----------------CCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCC
Confidence 999876654333211 011467788888655554433 2 35677777753
No 282
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.81 E-value=0.62 Score=38.10 Aligned_cols=125 Identities=10% Similarity=0.028 Sum_probs=78.2
Q ss_pred CCCCCeEEEEECCCCCEEEEEe--CCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEEC
Q 023642 122 QTTSRAYVSQFSADGSLFVAGF--QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDV 198 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~ 198 (279)
........++++|.+.+|+.+. ..+.|...+++..... .+ ....-.....++++|++..|+.+. ..+.|..+|+
T Consensus 119 ~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~-~~--~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~ 195 (318)
T 3sov_A 119 QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSRF-II--INSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNL 195 (318)
T ss_dssp SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSCE-EE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCeE-EE--EECCCCCccEEEEeccCCEEEEEECCCCEEEEEcC
Confidence 4456678999999766665554 3578888888743221 11 111123468999999777766554 5678999998
Q ss_pred CCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe
Q 023642 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
.......+... .......+++.. +..+.+-...+.|..+|..+|+.+..+.
T Consensus 196 dG~~~~~~~~~----------------~~~~P~glav~~-~~lywtd~~~~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 196 DGTNRQAVVKG----------------SLPHPFALTLFE-DILYWTDWSTHSILACNKYTGEGLREIH 246 (318)
T ss_dssp TSCSCEEEECS----------------CCSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEE
T ss_pred CCCceEEEecC----------------CCCCceEEEEeC-CEEEEEecCCCeEEEEECCCCCceEEEe
Confidence 76443322210 112456777753 3455565567889999988777655554
No 283
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=95.69 E-value=0.81 Score=38.51 Aligned_cols=120 Identities=7% Similarity=-0.045 Sum_probs=72.9
Q ss_pred eeCCCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEE-EEEeCCCeEEEEE
Q 023642 120 VDQTTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVD 197 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~i~d 197 (279)
+.........++|++.+..| ++-...+.|..++++.+..... . .........+++.+.+..| ++-...+.|.+++
T Consensus 111 ~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~-~--~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~ 187 (386)
T 3v65_B 111 LLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEV-V--STGLESPGGLAVDWVHDKLYWTDSGTSRIEVAN 187 (386)
T ss_dssp EECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEE-E--CSSCSCCCCEEEETTTTEEEEEETTTTEEEECB
T ss_pred EecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEE-E--eCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEe
Confidence 33445668899999865555 5555678999999887643221 1 1222245778998865555 4445567888888
Q ss_pred CCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec-CC-CeEEEEECCC
Q 023642 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SD-DCIYVYDLEA 258 (279)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s-~d-~~i~vwd~~~ 258 (279)
+.+.....+... .-.....+++.|.+..|+... .. +.|..+++..
T Consensus 188 ~dg~~~~~l~~~----------------~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 234 (386)
T 3v65_B 188 LDGAHRKVLLWQ----------------SLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG 234 (386)
T ss_dssp TTSCSCEEEECS----------------SCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCCceEEeecC----------------CCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCC
Confidence 875543222110 112567888888766555443 33 6788888764
No 284
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.66 E-value=0.72 Score=37.72 Aligned_cols=116 Identities=9% Similarity=0.048 Sum_probs=73.6
Q ss_pred CCCeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC--CCeEEEEECCC
Q 023642 124 TSRAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM--SPIVHIVDVGS 200 (279)
Q Consensus 124 ~~~V~~~~~spd~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--d~~i~i~d~~~ 200 (279)
......+++.+.+ .++++-...+.|.+++++..... .. ..........+++.|.+..|+.+.. .+.|..+++..
T Consensus 78 l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-~l--~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 78 LLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VL--FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EE--ECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred CCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-EE--EeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 3456778999754 45555566789999998754221 11 1122335789999997777666653 57888888865
Q ss_pred CceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEe-cCCCeEEEEECCC
Q 023642 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEA 258 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~-s~d~~i~vwd~~~ 258 (279)
.....+... .-.....++|+|++..|+.+ +..+.|..+|+..
T Consensus 155 ~~~~~~~~~----------------~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 155 SSRFIIINS----------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp CSCEEEECS----------------SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCeEEEEEC----------------CCCCccEEEEeccCCEEEEEECCCCEEEEEcCCC
Confidence 443222110 01256889999876665544 4567899998864
No 285
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=95.64 E-value=0.38 Score=41.63 Aligned_cols=113 Identities=10% Similarity=0.058 Sum_probs=62.6
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc------CCCcceEEEEECCC---CCEEEEEe-C----
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK------SLRWTVTDTSLSPD---QRHLVYAS-M---- 189 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~v~~~~~sp~---~~~l~~~~-~---- 189 (279)
-..-..++|.|+|+++++-...+.|++++..++.... +..+. ........++|+|+ +..|+.+. .
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~-~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~ 104 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKT-VFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPK 104 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTT
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeE-EecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccC
Confidence 3456799999999987776554578888876553321 11111 12346789999996 55544333 2
Q ss_pred --------CCeEEEEECCCCc--eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec
Q 023642 190 --------SPIVHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (279)
Q Consensus 190 --------d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s 246 (279)
...|.-|++..+. ......+. .-.+.. ..| ....++|.|||.++++.+
T Consensus 105 ~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~------~~~p~~-~~H--~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 105 STDKELPNQTIIRRYTYNKSTDTLEKPVDLL------AGLPSS-KDH--QSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp C--CCSCEEEEEEEEEEETTTTEEEEEEEEE------EEECCC-SSC--CEEEEEECTTSCEEEEEC
T ss_pred CCccccccccEEEEEEECCCCCCcCCcEEEE------EcCCCC-CCC--CCCeEeECCCCeEEEEEC
Confidence 1345555554321 11000000 000111 113 578999999998777644
No 286
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.64 E-value=0.54 Score=40.13 Aligned_cols=122 Identities=16% Similarity=0.126 Sum_probs=72.1
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccC--CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeecc-c
Q 023642 134 ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS--LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANV-T 210 (279)
Q Consensus 134 pd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~-~ 210 (279)
.+|..++.+-. +.||.-++...... +...... .-..|..+..+|+|++||..+ +..|.|..+..+........ .
T Consensus 30 ~n~t~i~~a~~-n~iR~~~i~~~~~Y-k~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFIQD-NIIRWYNVLTDSLY-HSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEEET-TEEEEEETTTCSSC-EEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEEEC-CEEEEEECCCCCcc-eEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccc
Confidence 35555555543 67888787744221 2222221 122578899999999999875 45899998884432111000 0
Q ss_pred cccceeEEeeCC-CCCccccEEEEEEecC---CCEEEEecCCCeEEEEECCC
Q 023642 211 EIHDGLDFSAAD-DGGYSFGIFSLKFSTD---GRELVAGSSDDCIYVYDLEA 258 (279)
Q Consensus 211 ~~~~~~~~~~~~-~~~~~~~v~~~~~sp~---g~~l~t~s~d~~i~vwd~~~ 258 (279)
.......|.-.. .......|..+.|+|- +..|++-..|+.|++||+..
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 000001111110 0012458999999994 56899999999999999975
No 287
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=95.60 E-value=0.029 Score=50.16 Aligned_cols=59 Identities=17% Similarity=0.147 Sum_probs=41.4
Q ss_pred CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeee
Q 023642 145 ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLA 207 (279)
Q Consensus 145 d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~ 207 (279)
++.|..||+.+++.+.+.... ..+....+...+..++.++.|+.++.||.++++.+...
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~----~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEK----FAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEES----SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCC----CCccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 478999999999776654321 12222223335667788999999999999999986543
No 288
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.52 E-value=0.33 Score=42.45 Aligned_cols=121 Identities=12% Similarity=0.098 Sum_probs=70.4
Q ss_pred CCeEEEEECC-CCC-EEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEE-------CCCCCEEEEEeCCC----
Q 023642 125 SRAYVSQFSA-DGS-LFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL-------SPDQRHLVYASMSP---- 191 (279)
Q Consensus 125 ~~V~~~~~sp-d~~-~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~-------sp~~~~l~~~~~d~---- 191 (279)
.....|+|+| +.. ++++-...+.|++.|+..+..................++| ++++++|+.+...+
T Consensus 139 ~~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 139 SDNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp CSEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 4577899999 344 4444444578999999887443221111112235899999 99999777666543
Q ss_pred ---eEEEEECCC-CceeeeeccccccceeEEeeCCCCCccccEEEEEEecC-CCEEEEecCCCeEEEEECC
Q 023642 192 ---IVHIVDVGS-GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSSDDCIYVYDLE 257 (279)
Q Consensus 192 ---~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~t~s~d~~i~vwd~~ 257 (279)
.+.+++... +........ . .+.. . .....++++|+ +.++++-..++.|+.+|+.
T Consensus 219 ~~~~V~~i~r~~~G~~~~~~~~-~-----~v~~-~-----~~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 219 ESPSVYIIKRNADGTFDDRSDI-Q-----LIAA-Y-----KQCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp GEEEEEEEECCTTSCCSTTSCE-E-----EEEE-E-----SCCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred cCceEEEEecCCCCceeecccc-e-----eecc-C-----CCceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 266666433 222100000 0 0000 0 03456788995 5555566677889999987
No 289
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.50 E-value=0.73 Score=40.26 Aligned_cols=123 Identities=11% Similarity=0.068 Sum_probs=69.1
Q ss_pred CCeEEEEE-------CCCCCEEEEEeCCC-------cEEEEEcCC-CeEE-----eeeeeccCCCcceEEEEECCCCCE-
Q 023642 125 SRAYVSQF-------SADGSLFVAGFQAS-------QIRIYDVER-GWKI-----QKDILAKSLRWTVTDTSLSPDQRH- 183 (279)
Q Consensus 125 ~~V~~~~~-------spd~~~l~s~~~d~-------~i~iwd~~~-~~~~-----~~~~~~~~~~~~v~~~~~sp~~~~- 183 (279)
.....++| ++++.+|+.+...+ .|.+++... +... ...... . ....++++|++..
T Consensus 186 ~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~-~---~p~giavdp~~g~L 261 (496)
T 3kya_A 186 NRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAY-K---QCNGATIHPINGEL 261 (496)
T ss_dssp SBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEE-S---CCCCEEECTTTCCE
T ss_pred CCCcEEEEeecccccCCCCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccC-C---CceEEEEcCCCCeE
Confidence 35899999 99999776665543 255665444 2221 111111 1 3457889995544
Q ss_pred EEEEeCCCeEEEEECC-------CCce-eeeecccc-ccceeEEeeCCCCCccccEEEEEEecCCCEE-EEecCCCeEEE
Q 023642 184 LVYASMSPIVHIVDVG-------SGTM-ESLANVTE-IHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYV 253 (279)
Q Consensus 184 l~~~~~d~~i~i~d~~-------~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~t~s~d~~i~v 253 (279)
+++-..++.|..+|+. ++.. ........ ....+...+ ...+.+.++|+|+|++| ++-+....|+.
T Consensus 262 Yvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~-----~~~~p~~ia~~p~G~~lYvaD~~~h~I~k 336 (496)
T 3kya_A 262 YFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA-----DPSWEFQIFIHPTGKYAYFGVINNHYFMR 336 (496)
T ss_dssp EEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS-----SSSCCEEEEECTTSSEEEEEETTTTEEEE
T ss_pred EEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC-----CCCCceEEEEcCCCCEEEEEeCCCCEEEE
Confidence 5556677889999987 5543 00000000 000000001 11256899999999954 44456778998
Q ss_pred EEC
Q 023642 254 YDL 256 (279)
Q Consensus 254 wd~ 256 (279)
++.
T Consensus 337 id~ 339 (496)
T 3kya_A 337 SDY 339 (496)
T ss_dssp EEE
T ss_pred Eec
Confidence 654
No 290
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=95.47 E-value=0.79 Score=36.97 Aligned_cols=125 Identities=11% Similarity=0.063 Sum_probs=67.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCC--cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCC
Q 023642 124 TSRAYVSQFSADGSLFVAGFQAS--QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~ 201 (279)
......++++|+|+++++..... .|..+|..+++.... ... ........++..+++..+++-..++.|+.+|..++
T Consensus 71 ~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~-~~~-~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 71 EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL-LTL-PDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE-EEC-TTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE-EeC-CCccccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 45688999999999766654432 477778777754321 111 11223455565565555555546889999998765
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEE-ecCCCeEEEEECCC
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVA-GSSDDCIYVYDLEA 258 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t-~s~d~~i~vwd~~~ 258 (279)
............. .... ..-.....+ +|++++|+. -...+.|..+++..
T Consensus 149 ~~~v~~~~~~~~~---~~~~---~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 149 SGSIWLEHPMLAR---SNSE---SVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp EEEEEEECGGGSC---SSTT---CCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred cEeEEEECCcccc---cccc---CCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 3211100000000 0000 001134445 788776554 44567899998864
No 291
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=95.46 E-value=0.39 Score=39.88 Aligned_cols=127 Identities=12% Similarity=0.198 Sum_probs=74.6
Q ss_pred CCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCC----CC---EEEEEe-C--CCeEEEEEC--CCC
Q 023642 134 ADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD----QR---HLVYAS-M--SPIVHIVDV--GSG 201 (279)
Q Consensus 134 pd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~----~~---~l~~~~-~--d~~i~i~d~--~~~ 201 (279)
|...+++.....+-+.+||+ +|+.+... .. +.+..+.+-|+ |+ ++++.. . ++++.+|++ .++
T Consensus 38 p~~s~ii~t~k~~gL~Vydl-~G~~l~~~---~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~ 111 (355)
T 3amr_A 38 PQNSKLITTNKKSGLVVYSL-DGKMLHSY---NT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG 111 (355)
T ss_dssp GGGCEEEEEETTTEEEEEET-TSCEEEEE---CC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC
T ss_pred CCccEEEEEcCCCCEEEEcC-CCcEEEEc---cC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC
Confidence 35567777788889999999 67666542 11 34677777663 22 233333 3 578999976 444
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEE--ecC-CC-EEEEecCCCeEEEEEC-------CCCeEEEEEeCCCc
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKF--STD-GR-ELVAGSSDDCIYVYDL-------EANKLSLRILAHTV 270 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~-g~-~l~t~s~d~~i~vwd~-------~~~~~~~~~~~h~~ 270 (279)
....+...... + ... ...++.+++ +|. ++ +++....++.+..|++ .+++.+.+|.-..+
T Consensus 112 ~l~~i~~~~~p-----v-~t~----~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq 181 (355)
T 3amr_A 112 TLQSMTDPDHP-----I-ATA----INEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQ 181 (355)
T ss_dssp CEEECSCTTSC-----E-ECC----CSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSC
T ss_pred ceeeccccccC-----c-CCC----CCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCC
Confidence 43222110000 0 000 015666777 774 54 5667778899999988 34567788875554
Q ss_pred ceeEEE
Q 023642 271 NIALWI 276 (279)
Q Consensus 271 ~v~~v~ 276 (279)
.-.|++
T Consensus 182 ~Egcvv 187 (355)
T 3amr_A 182 TEGMAA 187 (355)
T ss_dssp EEEEEE
T ss_pred cceEEE
Confidence 444443
No 292
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.36 E-value=0.058 Score=49.50 Aligned_cols=125 Identities=10% Similarity=0.000 Sum_probs=73.5
Q ss_pred CCeEEEEECCCCCEEEEEe-C-CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEE-EeCCCeEEEEECCCC
Q 023642 125 SRAYVSQFSADGSLFVAGF-Q-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVGSG 201 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~i~d~~~~ 201 (279)
.....++++|++.+|+.+. . .++|.+++++.... .. + ....-.....|+|+|++..|+. -...+.|..+|+.+.
T Consensus 496 ~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~-l-~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 496 SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YS-L-VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CE-E-SCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eE-E-EeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 4457788998655554443 2 26788877764321 11 1 1111224678999998665554 446678999998764
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
....+..... .......+++..+ .++++....+.|..+|..+|+.+..+..
T Consensus 573 ~~~~~~~~~~--------------~~~~P~glavd~~-~lywtd~~~~~V~~~d~~~G~~~~~i~~ 623 (699)
T 1n7d_A 573 NRKTILEDEK--------------RLAHPFSLAVFED-KVFWTDIINEAIFSANRLTGSDVNLLAE 623 (699)
T ss_dssp CCEEECCCSS--------------SCSSCCCCEEETT-EEEEECSTTTCEEEEETTTEEEEECCCT
T ss_pred ceEEEEecCC--------------cCCCceEeEEECC-EEEEEeCCCCeEEEEEccCCCceEEeec
Confidence 4332221100 0012344555543 4455555678999999988988887754
No 293
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=95.29 E-value=0.95 Score=36.82 Aligned_cols=117 Identities=7% Similarity=-0.100 Sum_probs=69.9
Q ss_pred CCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCC---eEEeeeeeccCCCcceEEEEECCCCCEE-EEEeCCCeEEEEE
Q 023642 123 TTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERG---WKIQKDILAKSLRWTVTDTSLSPDQRHL-VYASMSPIVHIVD 197 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l-~s~~~d~~i~iwd~~~~---~~~~~~~~~~~~~~~v~~~~~sp~~~~l-~~~~~d~~i~i~d 197 (279)
.......++|++++..| ++-...+.|..+++... ...... ....-.....+++.+.+..| ++-...+.|.+++
T Consensus 28 ~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~--~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~ 105 (316)
T 1ijq_A 28 NLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTV--ISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 105 (316)
T ss_dssp SCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEE--ECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEE--EeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEe
Confidence 34667899999866555 55556689999998761 111111 11122246789998765555 4445678999999
Q ss_pred CCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC-C-CeEEEEECC
Q 023642 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-D-DCIYVYDLE 257 (279)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~-d-~~i~vwd~~ 257 (279)
+.+.....+... . -.....+++.|.+..|+.+.. . +.|...++.
T Consensus 106 ~~g~~~~~~~~~-----------~-----~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 106 TKGVKRKTLFRE-----------N-----GSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp TTSSSEEEEEEC-----------T-----TCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCceEEEEEC-----------C-----CCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 876544322210 0 115678888886665544433 2 678888875
No 294
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=95.28 E-value=0.14 Score=39.66 Aligned_cols=115 Identities=12% Similarity=-0.010 Sum_probs=65.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeE-----EeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECC
Q 023642 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWK-----IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVG 199 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~-----~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~ 199 (279)
..+..++|+|+|.+.+. .++.+.-.+..++.. ..+.+-..+... ..++.|.|+|.+.++ .||.|+-++-.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGG-CSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccccccc-ceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 36779999999997776 667766666544210 001110112222 578999999998888 55888877654
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEE
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYD 255 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd 255 (279)
+......... .-.+ +. +--..+..+.|.|+|.+.+.. |+.++-+.
T Consensus 116 ~~~~~~Wl~~-----a~~v-g~---~gw~~~~~lff~p~G~Lyav~--dg~lyr~~ 160 (236)
T 1tl2_A 116 QSDTDNWIAR-----ATEV-GS---GGWSGFKFLFFHPNGYLYAVH--GQQFYKAL 160 (236)
T ss_dssp CSTTCCHHHH-----SEEE-EC---SSGGGEEEEEECTTSCEEEEE--TTEEEEEC
T ss_pred cCCCCceecc-----ccEe-cc---CCCCceEEEEECCCceEEEEe--CCcEEecC
Confidence 3222111100 0000 00 011257889999999877766 67654433
No 295
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=95.26 E-value=1.9 Score=40.09 Aligned_cols=127 Identities=9% Similarity=-0.028 Sum_probs=78.7
Q ss_pred CCCCCeEEEEECCCCCEEEEEe-C-CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEEC
Q 023642 122 QTTSRAYVSQFSADGSLFVAGF-Q-ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDV 198 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~-~-d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~ 198 (279)
........|+++|.+.+|+.+. . .++|...+++..... .+ ....-.....|++.|.+..|+.+. ..+.|..+++
T Consensus 511 ~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~~-~l--v~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~ 587 (791)
T 3m0c_C 511 ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIY-SL--VTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDV 587 (791)
T ss_dssp CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCEE-EE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCCCceE-EE--EeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEec
Confidence 4455688999999766665554 2 368888888754322 21 122223588999998777766655 4568999999
Q ss_pred CCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe
Q 023642 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
.+.....+..... .-.....|++.. +.++++-...+.|...|..+|+.+..+.
T Consensus 588 dG~~~~~v~~~~~--------------~l~~P~glav~~-~~lYwtD~~~~~I~~~dk~tG~~~~~l~ 640 (791)
T 3m0c_C 588 NGGNRKTILEDEK--------------RLAHPFSLAVFE-DKVFWTDIINEAIFSANRLTGSDVNLLA 640 (791)
T ss_dssp TSCSCEEEEECTT--------------TTSSEEEEEEET-TEEEEEETTTTEEEEEETTTCCCCEEEE
T ss_pred CCCceEEEecCCC--------------ccCCCCEEEEeC-CEEEEEECCCCEEEEEeCCCCcceEEee
Confidence 7655433321100 111345666643 3444455567789999988887666664
No 296
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=95.09 E-value=0.049 Score=48.86 Aligned_cols=60 Identities=12% Similarity=-0.001 Sum_probs=41.6
Q ss_pred CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeec
Q 023642 145 ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN 208 (279)
Q Consensus 145 d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 208 (279)
++.|..||+.+++.+.+..... ++..-.+...+.+++.++.|+.++.||.++|+.+....
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~----~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL----PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS----CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCC----CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 5789999999998766543221 12111122246788889999999999999999865443
No 297
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.83 E-value=1.5 Score=40.54 Aligned_cols=120 Identities=9% Similarity=0.091 Sum_probs=75.3
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~ 203 (279)
...|.++...++|.+. .|+.++-|..||..++....-..........|.++...+++.+.+ |..++-+..+|..+++.
T Consensus 362 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~ 439 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLW-IGTDGGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKF 439 (781)
T ss_dssp SSCEEEEEECTTSCEE-EEEBSSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEE
T ss_pred CcceEEEEEcCCCCEE-EEeCCCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcE
Confidence 3568999998887754 556556688999876532211000012234689998888887655 56656688899887765
Q ss_pred eeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeE
Q 023642 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKL 261 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~ 261 (279)
...... . .....|.++...++|.+.+. +. +-|..||..+++.
T Consensus 440 ~~~~~~-~-------------~~~~~v~~i~~d~~g~lwig-t~-~Gl~~~~~~~~~~ 481 (781)
T 3v9f_A 440 QIIELE-K-------------NELLDVRVFYEDKNKKIWIG-TH-AGVFVIDLASKKV 481 (781)
T ss_dssp EECCST-T-------------TCCCCEEEEEECTTSEEEEE-ET-TEEEEEESSSSSC
T ss_pred EEeccC-C-------------CCCCeEEEEEECCCCCEEEE-EC-CceEEEeCCCCeE
Confidence 432211 0 01237889988888875544 44 4589999877654
No 298
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=94.83 E-value=0.69 Score=38.45 Aligned_cols=74 Identities=14% Similarity=0.176 Sum_probs=43.6
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCeEEeeee----eccCCCcceEEEEECCC---CCEEEEE-eC------
Q 023642 125 SRAYVSQFSADGS-LFVAGFQASQIRIYDVERGWKIQKDI----LAKSLRWTVTDTSLSPD---QRHLVYA-SM------ 189 (279)
Q Consensus 125 ~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~~~~~~~----~~~~~~~~v~~~~~sp~---~~~l~~~-~~------ 189 (279)
..-..++|.|+|+ +++ +...++|++++.. +.....+. ...........++|+|+ +..|+.+ ..
T Consensus 18 ~~P~~i~~~pdG~~l~V-~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~ 95 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLI-TLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGK 95 (353)
T ss_dssp SSEEEEEECSTTCCEEE-EETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSC
T ss_pred CCcEEEEEcCCCCEEEE-EeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCC
Confidence 4567899999999 554 4567999999854 32211110 01122345789999996 4444433 22
Q ss_pred -CCeEEEEECCC
Q 023642 190 -SPIVHIVDVGS 200 (279)
Q Consensus 190 -d~~i~i~d~~~ 200 (279)
...|..|++..
T Consensus 96 ~~~~v~r~~~~~ 107 (353)
T 2g8s_A 96 AGTAVGYGRLSD 107 (353)
T ss_dssp EEEEEEEEEECT
T ss_pred ceeEEEEEEECC
Confidence 23566666654
No 299
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=94.74 E-value=2.1 Score=39.55 Aligned_cols=119 Identities=8% Similarity=0.033 Sum_probs=73.9
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccC-CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCc
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKS-LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGT 202 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~ 202 (279)
...|.++...++|.+.+. +.++-|..||..+++...- ....+ ....|.++...++|.+.++.. +|.+..||..+++
T Consensus 494 ~~~i~~i~~d~~g~lWig-t~~~Gl~~~~~~~~~~~~~-~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d~~~~~ 570 (781)
T 3v9f_A 494 ENFVRSIAQDSEGRFWIG-TFGGGVGIYTPDMQLVRKF-NQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPSARNFD 570 (781)
T ss_dssp CSCEEEEEECTTCCEEEE-ESSSCEEEECTTCCEEEEE-CTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESCTTTCC
T ss_pred cceeEEEEEcCCCCEEEE-EcCCCEEEEeCCCCeEEEc-cCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEECCCCCc
Confidence 467999999999886554 4434478888877643221 11111 134688999999988766554 6765888888776
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCe
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK 260 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~ 260 (279)
.......... -...|.++...++|.+.+++ ..| |..+|..+++
T Consensus 571 ~~~~~~~~gl-------------~~~~i~~i~~d~~g~lW~~t-~~G-l~~~~~~~~~ 613 (781)
T 3v9f_A 571 YQVFQRKEGL-------------PNTHIRAISEDKNGNIWAST-NTG-ISCYITSKKC 613 (781)
T ss_dssp CEEECGGGTC-------------SCCCCCEEEECSSSCEEEEC-SSC-EEEEETTTTE
T ss_pred EEEccccCCC-------------CCceEEEEEECCCCCEEEEc-CCc-eEEEECCCCc
Confidence 4332211100 11256788888888766554 344 7778876554
No 300
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=94.51 E-value=1.5 Score=35.84 Aligned_cols=116 Identities=10% Similarity=0.090 Sum_probs=65.4
Q ss_pred CCCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeec-cCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCC
Q 023642 123 TTSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILA-KSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~ 201 (279)
....+..++++|+++.++ ++.+|.+++.+.+.++........ ......+.++++.|++..++.+. ++.+ ++....|
T Consensus 203 ~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG 279 (327)
T 2xbg_A 203 TSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGG 279 (327)
T ss_dssp SSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTT
T ss_pred CCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCC
Confidence 456788899999987664 456788877754445433321111 11223588999998877766654 5655 3334434
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEE
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYD 255 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd 255 (279)
+.-....... .....++++.|.++++ ++.++.++.|.-++
T Consensus 280 ~tW~~~~~~~-------------~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 280 QTWQQDVDVK-------------KVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp SSCEECGGGT-------------TSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred cccEEcCccC-------------CCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 3211111000 0112567888876555 55556688776665
No 301
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=94.50 E-value=0.2 Score=41.51 Aligned_cols=124 Identities=6% Similarity=0.010 Sum_probs=70.3
Q ss_pred CEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEE--CCCCCEEEEE--eCCCeEEEEECCCCceeeeeccccc
Q 023642 137 SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSL--SPDQRHLVYA--SMSPIVHIVDVGSGTMESLANVTEI 212 (279)
Q Consensus 137 ~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~l~~~--~~d~~i~i~d~~~~~~~~~~~~~~~ 212 (279)
.+++.++.||.|.-.|..+|+........ ...++....- .+.+..++.. ..||.+..++..+|...........
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~--~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G~~~~~~~~~~l 88 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPE--NFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQGLQKLPLSIRQL 88 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGG--GSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTEEEEEEEEHHHH
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCC--ccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCCcEEeeeccccc
Confidence 47889999999999999999877764321 1112222110 1112233333 5899999999988855322221111
Q ss_pred cceeEEeeCCCCCccccEE-EEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 213 HDGLDFSAADDGGYSFGIF-SLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 213 ~~~~~~~~~~~~~~~~~v~-~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
...-.+..... +|. ..-=+..+..+++|+.++.+...|+++|+.+.++..
T Consensus 89 v~~SP~~~~~~-----pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 89 VSTSPLHLKTN-----IVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HTTCSEEEECC---------------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred eeccccccCCC-----ceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 10000000000 110 000001455788999999999999999999988863
No 302
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=94.48 E-value=0.37 Score=43.28 Aligned_cols=119 Identities=11% Similarity=0.127 Sum_probs=71.8
Q ss_pred CCEEEEEeC-CCcEEEEEc-CCCeEEeeeeeccCCC--------cceEEEEECCCCCE----EEEEeCCCeEEEEECCCC
Q 023642 136 GSLFVAGFQ-ASQIRIYDV-ERGWKIQKDILAKSLR--------WTVTDTSLSPDQRH----LVYASMSPIVHIVDVGSG 201 (279)
Q Consensus 136 ~~~l~s~~~-d~~i~iwd~-~~~~~~~~~~~~~~~~--------~~v~~~~~sp~~~~----l~~~~~d~~i~i~d~~~~ 201 (279)
+..++.++. ++.|.-+|. .+|+.+.+........ .....++++|.+.. |+.++.|+.+..+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456666676 889999999 8998776643211100 01133556554444 888889999999999999
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec------CCCeEEEEECCCCeEEEEEeC
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS------SDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s------~d~~i~vwd~~~~~~~~~~~~ 267 (279)
+.+.............+ ...++ . .++ .++.++ .++.|+-+|.++|+.+-++..
T Consensus 142 ~~~W~~~~~~~~~~~~~-------~ssP~----v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~ 200 (599)
T 1w6s_A 142 ETVWKVENSDIKVGSTL-------TIAPY----V-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYA 200 (599)
T ss_dssp CEEEEEECCCGGGTCBC-------CSCCE----E-ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEES
T ss_pred CEEEeecCCCCCcccee-------ecCCE----E-ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcC
Confidence 98543322111000000 00111 1 144 444444 378999999999999877764
No 303
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=94.27 E-value=0.16 Score=46.56 Aligned_cols=114 Identities=7% Similarity=-0.047 Sum_probs=67.1
Q ss_pred CeEEEEECCCC-CEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC-C-CeEEEEECCCCc
Q 023642 126 RAYVSQFSADG-SLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-S-PIVHIVDVGSGT 202 (279)
Q Consensus 126 ~V~~~~~spd~-~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d-~~i~i~d~~~~~ 202 (279)
....+++.+.+ +++++-...+.|.++++...... .+ ..........+++.|.+.+|+.+.. . +.|..+++....
T Consensus 454 ~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~-~l--~~~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~ 530 (699)
T 1n7d_A 454 APDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TL--FREQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 530 (699)
T ss_dssp -CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEE-EE--CCCSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCC
T ss_pred CcceEEEEeeCCcEEEEeccCCeEEEEecCCCceE-EE--EeCCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCC
Confidence 34568888644 44555556788999998765322 21 1122234678999997666555443 2 677777765433
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEE-EEecCCCeEEEEECCC
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL-VAGSSDDCIYVYDLEA 258 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l-~t~s~d~~i~vwd~~~ 258 (279)
...+... .-.....|+|+|++..| ++-+..+.|.++++..
T Consensus 531 ~~~l~~~----------------~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 531 IYSLVTE----------------NIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp CCEESCS----------------SCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred eeEEEeC----------------CCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 2211110 01145678999875544 4445567899999864
No 304
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=93.75 E-value=1.2 Score=38.61 Aligned_cols=117 Identities=14% Similarity=0.014 Sum_probs=60.1
Q ss_pred CCeEEEEECCCCC-EEEEEeCCCcEEEEEcCCCe---EEeeee--ecc----CCCcceEEEEECCC----CCEEEEEeC-
Q 023642 125 SRAYVSQFSADGS-LFVAGFQASQIRIYDVERGW---KIQKDI--LAK----SLRWTVTDTSLSPD----QRHLVYASM- 189 (279)
Q Consensus 125 ~~V~~~~~spd~~-~l~s~~~d~~i~iwd~~~~~---~~~~~~--~~~----~~~~~v~~~~~sp~----~~~l~~~~~- 189 (279)
..-..|+|.||+. .|+.+...|.|++++.+... .+..+. ... ........|+|+|+ +.+.++-+.
T Consensus 14 ~~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 14 RQPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SSEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CCceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4457899999996 45556678999999754321 111100 011 11346889999997 443333221
Q ss_pred -C----------CeEEEEECCCCc--eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC
Q 023642 190 -S----------PIVHIVDVGSGT--MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS 247 (279)
Q Consensus 190 -d----------~~i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~ 247 (279)
+ ..|.-|.+..+. ....... ..-+.+... ...| ....++|.|||.+.++.+.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~---~~i~~~~~~-~~~H--~g~~l~fgpDG~LYv~~Gd 158 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTA---RVFLEVAEL-HRKH--LGGQLLFGPDGFLYIILGD 158 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGC---EEEEEEEES-SSSS--CEEEEEECTTSCEEEEECC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCc---eEEEEcCCC-CCcc--cCCcEeECCCCcEEEEeCC
Confidence 1 134446654321 1000000 000011111 1124 4678999999987776554
No 305
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.38 E-value=3 Score=34.70 Aligned_cols=114 Identities=12% Similarity=0.059 Sum_probs=65.2
Q ss_pred CeEEEEECC--CCC-EEEEE-eC--CCcEEEEEcCCC-eEEeeeeeccC-CCcceEEEEECCCCCEEEEEeC--------
Q 023642 126 RAYVSQFSA--DGS-LFVAG-FQ--ASQIRIYDVERG-WKIQKDILAKS-LRWTVTDTSLSPDQRHLVYASM-------- 189 (279)
Q Consensus 126 ~V~~~~~sp--d~~-~l~s~-~~--d~~i~iwd~~~~-~~~~~~~~~~~-~~~~v~~~~~sp~~~~l~~~~~-------- 189 (279)
....+.+.+ ++. +|+.. .. +.+|.+|+++.. ..........+ .-....++++.|+|+++++...
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~ 192 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPYLK 192 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHHHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcccc
Confidence 556666655 454 34333 33 467888877643 11111111111 2235789999999998877651
Q ss_pred ---------CCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec-CCCeEEEEECCC
Q 023642 190 ---------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS-SDDCIYVYDLEA 258 (279)
Q Consensus 190 ---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s-~d~~i~vwd~~~ 258 (279)
.+.+.-+|. ++...+.. .-...+.++|+||+++|+.+. ..+.|+.|++..
T Consensus 193 ~~e~~~~~~~g~vyr~d~--~~~~~~~~-----------------~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 193 SWEMHLGLAWSFVTYYSP--NDVRVVAE-----------------GFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHTTCCCEEEEEECT--TCCEEEEE-----------------EESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred cchhhccCCccEEEEEEC--CeEEEeec-----------------CCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 133444443 32221111 012578999999998776554 577999999863
No 306
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=93.35 E-value=2.2 Score=35.48 Aligned_cols=78 Identities=18% Similarity=0.120 Sum_probs=50.1
Q ss_pred eeCCCCCeEEEEECCCCCEEEEE-eCCCcEEEEEcCC-CeEEeeeeeccCCCcceEEEEECC-CCCEEEEEeCC-CeEEE
Q 023642 120 VDQTTSRAYVSQFSADGSLFVAG-FQASQIRIYDVER-GWKIQKDILAKSLRWTVTDTSLSP-DQRHLVYASMS-PIVHI 195 (279)
Q Consensus 120 l~~h~~~V~~~~~spd~~~l~s~-~~d~~i~iwd~~~-~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~~~~~d-~~i~i 195 (279)
+...-..-+.++||||++.|..+ +..++|..|++.. +..... ..+ ...+..-.+++.+ +|++.+++..+ +.|..
T Consensus 216 ~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~-~~~-~~~g~PDGi~vD~e~G~lwva~~~~g~~v~~ 293 (355)
T 3sre_A 216 VAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPL-RVL-SFDTLVDNISVDPVTGDLWVGCHPNGMRIFF 293 (355)
T ss_dssp EEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEE-EEE-ECSSEEEEEEECTTTCCEEEEEESCHHHHHS
T ss_pred eecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecC-EEE-eCCCCCceEEEeCCCCcEEEEecCCceEEEE
Confidence 33334567889999999887665 4578999999864 322211 112 2245678899999 59988777644 34444
Q ss_pred EECC
Q 023642 196 VDVG 199 (279)
Q Consensus 196 ~d~~ 199 (279)
|+..
T Consensus 294 ~~P~ 297 (355)
T 3sre_A 294 YDAE 297 (355)
T ss_dssp CCTT
T ss_pred ECCC
Confidence 4443
No 307
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=93.32 E-value=2.7 Score=34.03 Aligned_cols=103 Identities=10% Similarity=0.025 Sum_probs=60.5
Q ss_pred EEECCCCCEEEEEeCC--------------CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe----CCC
Q 023642 130 SQFSADGSLFVAGFQA--------------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS----MSP 191 (279)
Q Consensus 130 ~~~spd~~~l~s~~~d--------------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~----~d~ 191 (279)
--+++++.+|+-.... ..|+..+++.++... +... ....|+|++..|+... ...
T Consensus 58 ~~i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~----l~~~----~~~~~s~~g~~Iy~~~~~~~~~~ 129 (302)
T 3s25_A 58 MYINADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV----LDPD----PCIYASLIGNYIYYLHYDTQTAT 129 (302)
T ss_dssp EEEEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE----EECS----CEEEEEEETTEEEEEEESSSSCE
T ss_pred eeEEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE----eecC----CccEEEEeCCEEEEEeecCCCCc
Confidence 4568899988766543 467888888764221 1121 1236788999988776 344
Q ss_pred eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC-CCeEEEEECCCCeE
Q 023642 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-DDCIYVYDLEANKL 261 (279)
Q Consensus 192 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~-d~~i~vwd~~~~~~ 261 (279)
.|...++.+.....+... .+ ..|+|+++.|+..+. ...|++.++..+..
T Consensus 130 ~Iy~~~~dGs~~~~lt~~-------------------~~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~ 179 (302)
T 3s25_A 130 SLYRIRIDGEEKKKIKNH-------------------YL--FTCNTSDRYFYYNNPKNGQLYRYDTASQSE 179 (302)
T ss_dssp EEEEEETTSCCCEEEESS-------------------CC--CCSEEETTEEEEECTTTCCEEEEETTTTEE
T ss_pred eEEEEECCCCCeEEEeCC-------------------Cc--eEeeEECCEEEEEeCCCceEEEEECCCCCE
Confidence 677777765544333221 11 334566666664443 45677777765543
No 308
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=93.29 E-value=4.5 Score=36.48 Aligned_cols=125 Identities=9% Similarity=-0.025 Sum_probs=79.3
Q ss_pred CCCCCeEEEEECCCCCEEEEEe--CCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe-CCCeEEEEEC
Q 023642 122 QTTSRAYVSQFSADGSLFVAGF--QASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS-MSPIVHIVDV 198 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~-~d~~i~i~d~ 198 (279)
........++++|...+|..+. ..++|...+++..... .+ .. .-.....+++++++..|+.+. ..+.|..+|+
T Consensus 120 ~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~-~l--~~-~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~ 195 (628)
T 4a0p_A 120 KDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT-TL--VP-NVGRANGLTIDYAKRRLYWTDLDTNLIESSNM 195 (628)
T ss_dssp SSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE-EE--EC-SCSSEEEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE-EE--EC-CCCCcceEEEccccCEEEEEECCCCEEEEEcC
Confidence 4445678999999655555444 3568888888755322 11 12 233578999999877766655 5678999999
Q ss_pred CCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeCC
Q 023642 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILAH 268 (279)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h 268 (279)
.+.....+. .. ......+++.. +..+++-...+.|...|..+|+....+...
T Consensus 196 dG~~~~v~~------------~~-----l~~P~glav~~-~~ly~tD~~~~~I~~~dk~tg~~~~~l~~~ 247 (628)
T 4a0p_A 196 LGLNREVIA------------DD-----LPHPFGLTQYQ-DYIYWTDWSRRSIERANKTSGQNRTIIQGH 247 (628)
T ss_dssp TSCSCEEEE------------EC-----CSCEEEEEEET-TEEEEEETTTTEEEEEETTTCCSCEEEECS
T ss_pred CCCceEEee------------cc-----CCCceEEEEEC-CEEEEecCCCCEEEEEECCCCCceEEEecC
Confidence 765442111 10 11456777764 445555556789999998888766666543
No 309
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=93.03 E-value=3.1 Score=33.90 Aligned_cols=111 Identities=15% Similarity=0.128 Sum_probs=62.1
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~ 203 (279)
...+..+.+.+++..++.+ .++.|.. ..+.|+...... ......+..+++.|++.+++.+...+..+-.|-.....
T Consensus 121 ~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~DgG~tW~~~~--~~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW 196 (327)
T 2xbg_A 121 PGSPRLIKALGNGSAEMIT-NVGAIYR-TKDSGKNWQALV--QEAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAW 196 (327)
T ss_dssp SSCEEEEEEEETTEEEEEE-TTCCEEE-ESSTTSSEEEEE--CSCCCCEEEEEECTTSCEEEEETTSSEEEEECTTCSSC
T ss_pred CCCeEEEEEECCCCEEEEe-CCccEEE-EcCCCCCCEEee--cCCCcceEEEEEcCCCcEEEEECCCcEEEEeCCCCCce
Confidence 3557888887777666655 4554422 333443332221 23445789999999998887765444333333211111
Q ss_pred eeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEE
Q 023642 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYD 255 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd 255 (279)
..... .....+..+.+.++++.++. +.++.+++.+
T Consensus 197 ~~~~~----------------~~~~~~~~~~~~~~g~~~~~-~~~G~~~~s~ 231 (327)
T 2xbg_A 197 EPHNR----------------TTSRRLHNMGFTPDGRLWMI-VNGGKIAFSD 231 (327)
T ss_dssp EEEEC----------------CSSSCEEEEEECTTSCEEEE-ETTTEEEEEE
T ss_pred eECCC----------------CCCCccceeEECCCCCEEEE-eCCceEEEec
Confidence 11110 01236788888888876654 4467676664
No 310
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=92.20 E-value=0.64 Score=42.16 Aligned_cols=77 Identities=14% Similarity=0.242 Sum_probs=52.1
Q ss_pred EEEEECC-CCCEEEEEeCCC-----------eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCC
Q 023642 173 TDTSLSP-DQRHLVYASMSP-----------IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR 240 (279)
Q Consensus 173 ~~~~~sp-~~~~l~~~~~d~-----------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 240 (279)
..+++.| +++.++.|+.+. .+.+||..+++...+...... +.....++++.++++
T Consensus 189 ~~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~-------------~~~~~~~~~~~~~g~ 255 (656)
T 1k3i_A 189 AAAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTK-------------HDMFCPGISMDGNGQ 255 (656)
T ss_dssp SEEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECS-------------CCCSSCEEEECTTSC
T ss_pred eeEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCC-------------CCCccccccCCCCCC
Confidence 3567777 888888887543 588999998876433221110 111334567789999
Q ss_pred EEEEecC-CCeEEEEECCCCeEE
Q 023642 241 ELVAGSS-DDCIYVYDLEANKLS 262 (279)
Q Consensus 241 ~l~t~s~-d~~i~vwd~~~~~~~ 262 (279)
+++.|+. +..+.+||..+++..
T Consensus 256 lyv~GG~~~~~v~~yd~~t~~W~ 278 (656)
T 1k3i_A 256 IVVTGGNDAKKTSLYDSSSDSWI 278 (656)
T ss_dssp EEEECSSSTTCEEEEEGGGTEEE
T ss_pred EEEeCCCCCCceEEecCcCCcee
Confidence 9999984 458999999877644
No 311
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=92.11 E-value=6.5 Score=35.37 Aligned_cols=118 Identities=8% Similarity=0.020 Sum_probs=74.9
Q ss_pred CCCCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC--CCeEEEEECC
Q 023642 123 TTSRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM--SPIVHIVDVG 199 (279)
Q Consensus 123 h~~~V~~~~~spd~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--d~~i~i~d~~ 199 (279)
-......+++++.+..| ++-...+.|.+.+++..... .. ....-....++++.|.+.+|+.... .+.|...++.
T Consensus 82 ~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~-~l--~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 82 GLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-VL--FWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp SCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-EE--ECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE-EE--EeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 33678899999965555 55566789999999865321 11 1122334788999998766666553 3567777776
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEe-cCCCeEEEEECCCC
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEAN 259 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~-s~d~~i~vwd~~~~ 259 (279)
+.....+... .-.....+++++++..|+.+ ...+.|...|+...
T Consensus 159 G~~~~~l~~~----------------~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 159 GSSRFIIINS----------------EIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT 203 (619)
T ss_dssp SCSCEEEECS----------------SCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCC
T ss_pred CCceEEEEeC----------------CCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC
Confidence 5443322211 11267889999876665544 45668888888653
No 312
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=92.07 E-value=4.4 Score=33.40 Aligned_cols=160 Identities=13% Similarity=0.077 Sum_probs=91.2
Q ss_pred cccceEeeeeecCCCC-ceeeCC----CCCeEEEEECCCCCEEEEEe-------CCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 102 ADCCHMLSRYLPVNGP-WPVDQT----TSRAYVSQFSADGSLFVAGF-------QASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 102 ~d~~~~~~~~~~~~~~-~~l~~h----~~~V~~~~~spd~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
.+..+..|++.....+ ..+..| ...|-.-..+++.++++..+ -.|.+.+|..+.+... ...+|.
T Consensus 124 T~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ----~ieGha 199 (365)
T 2xzh_A 124 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ----PIEGHA 199 (365)
T ss_dssp ESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEE----EECCSE
T ss_pred cCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccc----eeeeee
Confidence 3455666766543333 345555 45677778899999886543 2367889999887432 235664
Q ss_pred cceEEEEECCCCC-----EEEEEeC---CCeEEEEECCCC-ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCC
Q 023642 170 WTVTDTSLSPDQR-----HLVYASM---SPIVHIVDVGSG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGR 240 (279)
Q Consensus 170 ~~v~~~~~sp~~~-----~l~~~~~---d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~ 240 (279)
+... .+-.+|. .++.+.. .+.++|.++... ... .........+.|.++. -..-.-++..|+.-.
T Consensus 200 a~F~--~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~--~~f~kk~vdi~fppea---~~DFPVamqvs~kyg 272 (365)
T 2xzh_A 200 ASFA--QFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN--QPFPKKAVDVFFPPEA---QNDFPVAMQISEKHD 272 (365)
T ss_dssp EEEE--EECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTC--CCCCCEEEEECCCTTC---TTCCEEEEEEETTTT
T ss_pred eeeE--EEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCC--CCcccccceeeCCccc---cCCceEEEEecccCC
Confidence 4332 3322332 3333332 258999988432 110 0010101111222221 112345777888777
Q ss_pred EEEEecCCCeEEEEECCCCeEEEEEeCCCcce
Q 023642 241 ELVAGSSDDCIYVYDLEANKLSLRILAHTVNI 272 (279)
Q Consensus 241 ~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~~v 272 (279)
.+..-+.-|.|++||+.+|.++..-+--...|
T Consensus 273 viyviTK~G~ihlyDleTgt~i~~nrIS~d~i 304 (365)
T 2xzh_A 273 VVFLITKYGYIHLYDLETGTCIYMNRISGETI 304 (365)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEECCSSCE
T ss_pred EEEEEeCCcEEEEEEcccCcEEEEeccCCCce
Confidence 78888888999999999999987766444443
No 313
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=91.73 E-value=7.2 Score=35.14 Aligned_cols=114 Identities=10% Similarity=0.022 Sum_probs=72.9
Q ss_pred CCeEEEEECCCCCEE-EEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC--CCeEEEEECCCC
Q 023642 125 SRAYVSQFSADGSLF-VAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM--SPIVHIVDVGSG 201 (279)
Q Consensus 125 ~~V~~~~~spd~~~l-~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~--d~~i~i~d~~~~ 201 (279)
.....+++.+.+..| ++-...+.|.+.+++..... . . ....-....++++.|....|+.... .+.|...++.+.
T Consensus 80 ~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~-~-l-~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~ 156 (628)
T 4a0p_A 80 DYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQ-V-L-VWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS 156 (628)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSTTCE-E-E-ECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC
T ss_pred CCcceEEEEeCCCEEEEEECCCCEEEEEecCCCcEE-E-E-EeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC
Confidence 456789998765555 55556788999998765321 1 1 1122235789999997666666553 467888888765
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEe-cCCCeEEEEECCC
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAG-SSDDCIYVYDLEA 258 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~-s~d~~i~vwd~~~ 258 (279)
....+... -.....+++++++..|+.+ ...+.|..+|+..
T Consensus 157 ~~~~l~~~-----------------~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 157 ERTTLVPN-----------------VGRANGLTIDYAKRRLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp SCEEEECS-----------------CSSEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEECC-----------------CCCcceEEEccccCEEEEEECCCCEEEEEcCCC
Confidence 54333211 1267788888876666554 3466788888764
No 314
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=91.69 E-value=0.93 Score=40.14 Aligned_cols=97 Identities=12% Similarity=0.195 Sum_probs=59.6
Q ss_pred ceEEEEECCCCCEEEEEe-CCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC
Q 023642 171 TVTDTSLSPDQRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD 249 (279)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~ 249 (279)
....+.++|||++++.++ .+.++.++|++.-....-.+........ ...-. ---.....+|.++|.-..|.--|.
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~--~ae~e--~GlGPlHt~Fd~~G~aYTtlfidS 399 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVI--VGEPE--LGLGPLHTTFDGRGNAYTTLFIDS 399 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGE--EECCB--CCSCEEEEEECSSSEEEEEETTTT
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccce--Eeecc--CCCcccEEEECCCCceEeeeeecc
Confidence 456789999999987665 6889999999742210000000000000 00000 001457789999995555666899
Q ss_pred eEEEEECCCC----------eEEEEEeCCCcc
Q 023642 250 CIYVYDLEAN----------KLSLRILAHTVN 271 (279)
Q Consensus 250 ~i~vwd~~~~----------~~~~~~~~h~~~ 271 (279)
.|.-|++... ..+.++.-|-++
T Consensus 400 qvvkWni~~a~~~~~g~~~~~v~~k~dv~Yqp 431 (638)
T 3sbq_A 400 QVVKWNMEEAVRAYKGEKVNYIKQKLDVHYQP 431 (638)
T ss_dssp EEEEEEHHHHHHHHTTCCCCCEEEEEECSSCE
T ss_pred eEEEEeccHHHHHhcCccCCeeeeccccccCC
Confidence 9999999753 577888776554
No 315
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=91.46 E-value=7.7 Score=34.90 Aligned_cols=118 Identities=8% Similarity=-0.062 Sum_probs=67.5
Q ss_pred CCCCCeEEEEECCCCCEEEEE-eCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEE-EeCCCeEEEEECC
Q 023642 122 QTTSRAYVSQFSADGSLFVAG-FQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVY-ASMSPIVHIVDVG 199 (279)
Q Consensus 122 ~h~~~V~~~~~spd~~~l~s~-~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~-~~~d~~i~i~d~~ 199 (279)
........++|++.+..|+-+ ...++|..++++........ ....-.....+++.+.+..|+. -...+.|.+.++.
T Consensus 37 ~~~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~~v--~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~d 114 (619)
T 3s94_A 37 GGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNV--VVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLD 114 (619)
T ss_dssp BCCSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CEEE--ECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred cCCCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceEEE--EeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECC
Confidence 344567899999966666544 45678999998755211111 1222235889999996665554 4567899999998
Q ss_pred CCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC--CCeEEEEECC
Q 023642 200 SGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--DDCIYVYDLE 257 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~--d~~i~vwd~~ 257 (279)
+.....+... .-.....+++.|.+.+|+.... ...|...++.
T Consensus 115 G~~~~~l~~~----------------~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~d 158 (619)
T 3s94_A 115 GSLRKVLFWQ----------------ELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMD 158 (619)
T ss_dssp SCSCEEEECS----------------SCSCCCCEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CCCEEEEEeC----------------CCCCCceEEEecCCCeEEEeccCCCCEEEEEECC
Confidence 7654333210 0013456777776444443332 3456655654
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=91.02 E-value=4.1 Score=33.69 Aligned_cols=63 Identities=8% Similarity=-0.037 Sum_probs=37.4
Q ss_pred CCCeEEEEECCC---CCEEEEEeC----C----CcEEEEEcCCC--eE-----Eeeeee-ccCCCcceEEEEECCCCCEE
Q 023642 124 TSRAYVSQFSAD---GSLFVAGFQ----A----SQIRIYDVERG--WK-----IQKDIL-AKSLRWTVTDTSLSPDQRHL 184 (279)
Q Consensus 124 ~~~V~~~~~spd---~~~l~s~~~----d----~~i~iwd~~~~--~~-----~~~~~~-~~~~~~~v~~~~~sp~~~~l 184 (279)
......++|+|+ +..|..+.. + ..|..|+.... .. +..... ...| ....++|.|||.++
T Consensus 72 ~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h--~~~~l~~~pDG~Ly 149 (354)
T 3a9g_A 72 EAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPGAYIH--NGGRIRFGPDGMLY 149 (354)
T ss_dssp TCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEECCSSC--CCCCEEECTTSCEE
T ss_pred CCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCCCCCc--CCceEEECCCCcEE
Confidence 456899999997 555544332 3 57888887654 11 111011 1123 34679999999876
Q ss_pred EEEe
Q 023642 185 VYAS 188 (279)
Q Consensus 185 ~~~~ 188 (279)
++.+
T Consensus 150 vt~G 153 (354)
T 3a9g_A 150 ITTG 153 (354)
T ss_dssp EECC
T ss_pred EEEC
Confidence 6643
No 317
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.90 E-value=1 Score=34.81 Aligned_cols=110 Identities=12% Similarity=0.045 Sum_probs=58.5
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeE--E--eeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccc
Q 023642 135 DGSLFVAGFQASQIRIYDVERGWK--I--QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVT 210 (279)
Q Consensus 135 d~~~l~s~~~d~~i~iwd~~~~~~--~--~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~ 210 (279)
.+..|....+| +++.=...++.. . ........--..+..++|+|+|.+.+. .++.++-.+..++.........
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 34556666666 555444443320 0 010111111236889999999997766 6677777666553332111110
Q ss_pred cccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCC
Q 023642 211 EIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEA 258 (279)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~ 258 (279)
.-.+.. +... -..+.|.|+|.+.++ .|+.|+-++-.+
T Consensus 80 ------t~IG~~--Gw~~-F~a~~fD~~G~LYav--~dG~iyr~~pP~ 116 (236)
T 1tl2_A 80 ------KKIGNG--GWNQ-FQFLFFDPNGYLYAV--SKDKLYKASPPQ 116 (236)
T ss_dssp ------EEEECS--CGGG-CSEEEECTTSCEEEE--ETTEEEEESCCC
T ss_pred ------cEeccc--cccc-ceEEEECCCCCEEEe--CCCEEEEeCCCc
Confidence 000000 0111 257889999988777 568888887643
No 318
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.27 E-value=4.9 Score=31.89 Aligned_cols=108 Identities=15% Similarity=0.163 Sum_probs=60.9
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcee
Q 023642 135 DGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGTME 204 (279)
Q Consensus 135 d~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~ 204 (279)
++..++.|+.+ ..+.+||+.+...... ............+.+ +++.++.|+.+ ..+.+||+.+.+..
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNV-TPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEE-CCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeC-CCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 66777777654 4688999988743322 111111111222222 56666777653 46899999988765
Q ss_pred eeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC-----CeEEEEECCCCeE
Q 023642 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKL 261 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d-----~~i~vwd~~~~~~ 261 (279)
.+....... .....+. .++++++.|+.+ ..+.+||..+.+.
T Consensus 236 ~~~~~p~~r--------------~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 281 (301)
T 2vpj_A 236 TVTSMTTPR--------------CYVGATV--LRGRLYAIAGYDGNSLLSSIECYDPIIDSW 281 (301)
T ss_dssp EECCCSSCC--------------BSCEEEE--ETTEEEEECCBCSSSBEEEEEEEETTTTEE
T ss_pred ECCCCCCcc--------------cceeEEE--ECCEEEEEcCcCCCcccccEEEEcCCCCeE
Confidence 443221110 0111222 267777777754 4689999987653
No 319
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=89.54 E-value=2.6 Score=34.15 Aligned_cols=67 Identities=15% Similarity=0.059 Sum_probs=42.5
Q ss_pred EECCCCCEEEEEe--C--CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC-CCeEEEEECCCCceee
Q 023642 131 QFSADGSLFVAGF--Q--ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-SPIVHIVDVGSGTMES 205 (279)
Q Consensus 131 ~~spd~~~l~s~~--~--d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-d~~i~i~d~~~~~~~~ 205 (279)
.|+|++++|+-.. . ...|...+++.... .+ +..+. + .+|+|+++.|+..+. ...|...++.++....
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~---lt~~~--~--~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KK---IKNHY--L--FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL 181 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EE---EESSC--C--CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EE---EeCCC--c--eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence 6788999888765 3 34555666664322 22 12222 2 457889998887665 6788888887766543
No 320
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=89.12 E-value=4.9 Score=31.99 Aligned_cols=109 Identities=15% Similarity=0.137 Sum_probs=60.6
Q ss_pred CCCEEEEEeCC-------CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCc
Q 023642 135 DGSLFVAGFQA-------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGT 202 (279)
Q Consensus 135 d~~~l~s~~~d-------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~ 202 (279)
++..++.|+.+ ..+.+||+.+....... ...........+.+ +++.++.|+.+ ..+.+||..+.+
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIA-EMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECC-CCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 56666776542 35889999877433221 11111111222222 56677777654 468999998877
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC-----eEEEEECCCCeEE
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD-----CIYVYDLEANKLS 262 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~-----~i~vwd~~~~~~~ 262 (279)
...+....... . ....+. .++++++.|+.++ .+.+||..+.+..
T Consensus 232 W~~~~~~~~~r------------~--~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 280 (302)
T 2xn4_A 232 WRQVADMNMCR------------R--NAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTTDKWT 280 (302)
T ss_dssp EEEECCCSSCC------------B--SCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred EeeCCCCCCcc------------c--cCeEEE--ECCEEEEECCcCCCcccccEEEEcCCCCeEE
Confidence 65443221110 0 111122 3677777877543 5999999887654
No 321
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=88.79 E-value=3.8 Score=37.41 Aligned_cols=37 Identities=19% Similarity=0.129 Sum_probs=30.8
Q ss_pred cEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEeC
Q 023642 229 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRILA 267 (279)
Q Consensus 229 ~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~~ 267 (279)
.|.++.+ +..++++-+.|.++|+||+++++++.+..-
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 4555544 478999999999999999999999988764
No 322
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.32 E-value=8.3 Score=30.65 Aligned_cols=109 Identities=13% Similarity=0.153 Sum_probs=60.9
Q ss_pred CCCEEEEEeCC----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC------CeEEEEECCCCcee
Q 023642 135 DGSLFVAGFQA----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS------PIVHIVDVGSGTME 204 (279)
Q Consensus 135 d~~~l~s~~~d----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d------~~i~i~d~~~~~~~ 204 (279)
++..++.|+.+ ..+.+||+.+...... ............+.+ +++.++.|+.+ ..+.+||..+....
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~ 131 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSWYSK-LGPPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWH 131 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEEEEE-ECCSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeEEEC-CCCCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceE
Confidence 66677777755 6788999988743322 111111112222223 66677777654 46899999987764
Q ss_pred eeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC---------CCeEEEEECCCCeEE
Q 023642 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS---------DDCIYVYDLEANKLS 262 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~---------d~~i~vwd~~~~~~~ 262 (279)
.......... ....+. .++++++.|+. -..+.+||..+.+..
T Consensus 132 ~~~~~p~~r~--------------~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~ 182 (306)
T 3ii7_A 132 TKPSMLTQRC--------------SHGMVE--ANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWT 182 (306)
T ss_dssp EECCCSSCCB--------------SCEEEE--ETTEEEEECCEESCTTTCEECCCEEEEETTTTEEE
T ss_pred eCCCCcCCcc--------------eeEEEE--ECCEEEEECCCCCCCCcccccceEEEeCCCCCeEE
Confidence 4332211100 111122 26667777653 345889999887543
No 323
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=88.03 E-value=15 Score=35.02 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=32.1
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeec
Q 023642 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN 208 (279)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 208 (279)
.+.+++..++..++++-+.|+++|+|++.++++.....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 46777788888999999999999999999998865443
No 324
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=87.77 E-value=20 Score=34.95 Aligned_cols=112 Identities=12% Similarity=0.123 Sum_probs=65.5
Q ss_pred CCCCCEEEEEeC-C--------CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCce
Q 023642 133 SADGSLFVAGFQ-A--------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTM 203 (279)
Q Consensus 133 spd~~~l~s~~~-d--------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~ 203 (279)
..+...|+++.- + ..|++.+......+... .......|...+... .+++.++ ++.+.++.+..++.
T Consensus 470 ~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w--~~p~~~~I~~As~n~--~~vvva~-g~~l~~fel~~~~L 544 (1158)
T 3ei3_A 470 VDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEW--KEPQAKNISVASCNS--SQVVVAV-GRALYYLQIHPQEL 544 (1158)
T ss_dssp CSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEE--CCTTCCCCCEEEECS--SEEEEEE-TTEEEEEEEETTEE
T ss_pred cCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEE--ECCCCCEEEEEEeCC--CEEEEEE-CCEEEEEEeeCCce
Confidence 335556666542 1 24666666544333221 112223566666543 4666555 57788887766543
Q ss_pred eeeeccccccceeEEeeCCCCCccccEEEEEEecC------CCEEEEecC-CCeEEEEECCCCeEEEE
Q 023642 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD------GRELVAGSS-DDCIYVYDLEANKLSLR 264 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~------g~~l~t~s~-d~~i~vwd~~~~~~~~~ 264 (279)
...... . -...|.|+++.|. +++++.|.. |++|+|+++.+.+.+..
T Consensus 545 ~~~~~~-------~--------l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~ 597 (1158)
T 3ei3_A 545 RQISHT-------E--------MEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHK 597 (1158)
T ss_dssp EEEEEE-------E--------CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred eeeccc-------C--------CCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEE
Confidence 222111 1 1127999998763 468999996 99999999998666544
No 325
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=87.49 E-value=9.6 Score=30.40 Aligned_cols=109 Identities=19% Similarity=0.138 Sum_probs=61.3
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcee
Q 023642 135 DGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGTME 204 (279)
Q Consensus 135 d~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~ 204 (279)
++.+++.|+.+ ..+.+||+.+...... ............+.+ +++.++.|+.+ ..+.+||+.+.+..
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMI-TAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeC-CCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 56777777654 4688999987743322 111111111222333 56677777654 56999999987765
Q ss_pred eeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC-----CeEEEEECCCCeEE
Q 023642 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLS 262 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d-----~~i~vwd~~~~~~~ 262 (279)
.+....... .....+. -++++++.|+.+ ..+.+||..+.+..
T Consensus 245 ~~~~~p~~r--------------~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 291 (308)
T 1zgk_A 245 FVAPMKHRR--------------SALGITV--HQGRIYVLGGYDGHTFLDSVECYDPDTDTWS 291 (308)
T ss_dssp ECCCCSSCC--------------BSCEEEE--ETTEEEEECCBCSSCBCCEEEEEETTTTEEE
T ss_pred ECCCCCCCc--------------cceEEEE--ECCEEEEEcCcCCCcccceEEEEcCCCCEEe
Confidence 433221110 0111122 267777777743 46899999887644
No 326
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.01 E-value=1.4 Score=41.99 Aligned_cols=39 Identities=31% Similarity=0.178 Sum_probs=34.9
Q ss_pred ccEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe
Q 023642 228 FGIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 228 ~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
..+.+++..++..++++-+.|+++|+|++.+++++.+..
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 467788888899999999999999999999999998865
No 327
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=86.75 E-value=0.59 Score=41.32 Aligned_cols=70 Identities=13% Similarity=0.063 Sum_probs=48.8
Q ss_pred EEEEECCCCCEEEEEe-CCCcEEEEEcCCC------e------EEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEE
Q 023642 128 YVSQFSADGSLFVAGF-QASQIRIYDVERG------W------KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVH 194 (279)
Q Consensus 128 ~~~~~spd~~~l~s~~-~d~~i~iwd~~~~------~------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~ 194 (279)
-.+.++|||++++.++ -+.++.++|+..- + .+.. .....-.....+|.++|.-..+.-.|..|.
T Consensus 326 HGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~a---e~e~GlGPlHt~Fd~~G~aYTtlfidSqvv 402 (638)
T 3sbq_A 326 HGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVG---EPELGLGPLHTTFDGRGNAYTTLFIDSQVV 402 (638)
T ss_dssp CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEE---CCBCCSCEEEEEECSSSEEEEEETTTTEEE
T ss_pred cceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEe---eccCCCcccEEEECCCCceEeeeeecceEE
Confidence 3468999999987665 4779999998741 1 0111 111223567889999995555666899999
Q ss_pred EEECCC
Q 023642 195 IVDVGS 200 (279)
Q Consensus 195 i~d~~~ 200 (279)
.|++..
T Consensus 403 kWni~~ 408 (638)
T 3sbq_A 403 KWNMEE 408 (638)
T ss_dssp EEEHHH
T ss_pred EEeccH
Confidence 999864
No 328
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.89 E-value=11 Score=29.70 Aligned_cols=109 Identities=12% Similarity=0.087 Sum_probs=60.7
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcee
Q 023642 135 DGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGTME 204 (279)
Q Consensus 135 d~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~ 204 (279)
++..++.|+.+ ..+.+||+.+.+..... ...........+.+ +++.++.|+.+ ..+.+||+.+....
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~ 188 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLG-DMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWT 188 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEE-ECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECC-CCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEE
Confidence 56777777654 36889998877433221 11111111222222 66677776644 45889999887765
Q ss_pred eeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC-----CeEEEEECCCCeEE
Q 023642 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLS 262 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d-----~~i~vwd~~~~~~~ 262 (279)
.+....... .....+. .++++++.|+.+ ..+.+||+.+.+..
T Consensus 189 ~~~~~p~~r--------------~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~ 235 (301)
T 2vpj_A 189 NVTPMATKR--------------SGAGVAL--LNDHIYVVGGFDGTAHLSSVEAYNIRTDSWT 235 (301)
T ss_dssp EECCCSSCC--------------BSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred eCCCCCccc--------------ccceEEE--ECCEEEEEeCCCCCcccceEEEEeCCCCcEE
Confidence 443221110 0111222 256777777753 46899999887644
No 329
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=85.80 E-value=9.1 Score=30.54 Aligned_cols=109 Identities=16% Similarity=0.150 Sum_probs=60.1
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCcee
Q 023642 135 DGSLFVAGFQA-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGTME 204 (279)
Q Consensus 135 d~~~l~s~~~d-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~~~ 204 (279)
++..++.|+.+ ..+.+||+.+.+..... ...........+.+ +++.++.|+.+ ..+.+||+.+.+..
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 197 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVA-PMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWR 197 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECC-CCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEE
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECC-CCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEe
Confidence 66777777643 46889999877433221 11111111222233 56666676643 45889999887764
Q ss_pred eeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC-----CeEEEEECCCCeEE
Q 023642 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLS 262 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d-----~~i~vwd~~~~~~~ 262 (279)
.+...... . .....+.+ ++++++.|+.+ ..+.+||+.+.+..
T Consensus 198 ~~~~~p~~----------r----~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~ 244 (308)
T 1zgk_A 198 MITAMNTI----------R----SGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWT 244 (308)
T ss_dssp ECCCCSSC----------C----BSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEE
T ss_pred eCCCCCCc----------c----ccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEE
Confidence 43321110 0 01122222 67777777654 46999999876543
No 330
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=85.78 E-value=12 Score=29.88 Aligned_cols=112 Identities=14% Similarity=0.139 Sum_probs=61.7
Q ss_pred CCCEEEEEeC-C-----CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCC-----eEEEEECCCCce
Q 023642 135 DGSLFVAGFQ-A-----SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP-----IVHIVDVGSGTM 203 (279)
Q Consensus 135 d~~~l~s~~~-d-----~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~-----~i~i~d~~~~~~ 203 (279)
+++.++.|+. + ..+.+||+.+...... ............+.+ +++.++.|+.++ .+.+||+.+.+.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W 224 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKEL-APMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNKW 224 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEEC-CCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTEE
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEEC-CCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCeE
Confidence 5667777776 2 4689999987743221 111111111222222 667777776543 588899988776
Q ss_pred eeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC--------------CeEEEEECCCCeEEEEE
Q 023642 204 ESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD--------------DCIYVYDLEANKLSLRI 265 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d--------------~~i~vwd~~~~~~~~~~ 265 (279)
..+....... .....+. -++++++.|+.+ ..+.+||+.+.+-....
T Consensus 225 ~~~~~~p~~r--------------~~~~~~~--~~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~ 284 (315)
T 4asc_A 225 APFEAFPQER--------------SSLSLVS--LVGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKWEGVL 284 (315)
T ss_dssp EEECCCSSCC--------------BSCEEEE--ETTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEEEEEE
T ss_pred EECCCCCCcc--------------cceeEEE--ECCEEEEECCccccCcCCccccccccCcEEEecCCCChhhhhc
Confidence 5443221110 0111222 256777777653 24889999987755443
No 331
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=85.74 E-value=5.9 Score=32.69 Aligned_cols=75 Identities=11% Similarity=0.154 Sum_probs=45.5
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC---CCEEEEec-
Q 023642 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD---GRELVAGS- 246 (279)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---g~~l~t~s- 246 (279)
..+.++|.|+|+++++ ..++.|++++ .+....+.... . +.. .......++|+|+ +..|+.+.
T Consensus 32 ~P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~-v-----~~~-----g~~~p~gia~~pdf~~~g~lYv~~~ 97 (352)
T 2ism_A 32 VPWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELS-V-----YHR-----GESGLLGLALHPRFPQEPYVYAYRT 97 (352)
T ss_dssp CEEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECC-C-----CCS-----TTCSEEEEEECTTTTTSCEEEEEEE
T ss_pred CceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecce-E-----eec-----CCCCceeEEECCCCCCCCEEEEEEe
Confidence 4678999999995554 5669999998 44432221111 0 000 1126789999998 55544433
Q ss_pred CC-----CeEEEEECCCC
Q 023642 247 SD-----DCIYVYDLEAN 259 (279)
Q Consensus 247 ~d-----~~i~vwd~~~~ 259 (279)
.. ..|..|+...+
T Consensus 98 ~~~~~~~~~v~r~~~~~~ 115 (352)
T 2ism_A 98 VAEGGLRNQVVRLRHLGE 115 (352)
T ss_dssp ECTTSSEEEEEEEEECSS
T ss_pred cCCCCCccEEEEEEeCCC
Confidence 22 57888887643
No 332
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=85.58 E-value=11 Score=37.44 Aligned_cols=154 Identities=13% Similarity=0.111 Sum_probs=85.6
Q ss_pred cccceEeeeeecCCCC-ceeeCC----CCCeEEEEECCCCCEEEEEe-------CCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 102 ADCCHMLSRYLPVNGP-WPVDQT----TSRAYVSQFSADGSLFVAGF-------QASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 102 ~d~~~~~~~~~~~~~~-~~l~~h----~~~V~~~~~spd~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
.+..+..|++.....| ..+..| ...|-.-..+++.++++..| -.|.+.+|..+.+... ...+|.
T Consensus 123 T~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ----~iegha 198 (1630)
T 1xi4_A 123 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ----PIEGHA 198 (1630)
T ss_pred cCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccch----hhhHhH
Confidence 4566777877643333 345555 45677778889999886433 3478889998876321 234554
Q ss_pred cceEEEEEC--CCCC-EEEEEeC---CCeEEEEECCCC-ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEE
Q 023642 170 WTVTDTSLS--PDQR-HLVYASM---SPIVHIVDVGSG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL 242 (279)
Q Consensus 170 ~~v~~~~~s--p~~~-~l~~~~~---d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 242 (279)
+....+.+. +... .++.+.. .+.++|.++... ... .........+.|.+... .- -..++..++.-..+
T Consensus 199 ~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~--~~f~kk~~~~~~~~~~~--~D-fpv~~~vs~k~g~i 273 (1630)
T 1xi4_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN--QPFPKKAVDVFFPPEAQ--ND-FPVAMQISEKHDVV 273 (1630)
T ss_pred hhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCC--CCCccccccccCCcccc--cC-cceEEEeccccCEE
Confidence 444333332 2222 3332222 268899888543 110 01111111122222211 11 23466777776677
Q ss_pred EEecCCCeEEEEECCCCeEEEE
Q 023642 243 VAGSSDDCIYVYDLEANKLSLR 264 (279)
Q Consensus 243 ~t~s~d~~i~vwd~~~~~~~~~ 264 (279)
..-+.-|.|+++|+.||.++..
T Consensus 274 y~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 274 FLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred EEEecCceEEEEecccchhhhh
Confidence 7778889999999999887644
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=85.47 E-value=14 Score=30.46 Aligned_cols=78 Identities=18% Similarity=0.142 Sum_probs=46.9
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC----CCEEEEe-
Q 023642 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD----GRELVAG- 245 (279)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~----g~~l~t~- 245 (279)
..+.++|.|||+++++--..|.|++++..++....+...... +.. .......++|+|+ +.+.++-
T Consensus 33 ~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v-----~~~-----g~~GllGia~~Pdf~~~g~lYv~yt 102 (347)
T 3das_A 33 SPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGV-----SPS-----GEGGLLGIALSPDYASDHMVYAYFT 102 (347)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTC-----CCB-----TTBSEEEEEECTTHHHHCEEEEEEE
T ss_pred CceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCce-----eec-----CCCCceeeEeccccccCCEEEEEEe
Confidence 478999999999877766589999998766654322211100 000 1236789999995 4333332
Q ss_pred -cCCCeEEEEECCC
Q 023642 246 -SSDDCIYVYDLEA 258 (279)
Q Consensus 246 -s~d~~i~vwd~~~ 258 (279)
..+..|.-|.+..
T Consensus 103 ~~~~~~v~R~~~~~ 116 (347)
T 3das_A 103 SASDNRIVRMLYDE 116 (347)
T ss_dssp CSSSEEEEEEEBCT
T ss_pred cCCCCEEEEEEeCC
Confidence 2344566665543
No 334
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=84.71 E-value=18 Score=31.08 Aligned_cols=161 Identities=12% Similarity=0.073 Sum_probs=93.3
Q ss_pred cccceEeeeeecCCCC-ceeeCC----CCCeEEEEECCCCCEEEEEe-------CCCcEEEEEcCCCeEEeeeeeccCCC
Q 023642 102 ADCCHMLSRYLPVNGP-WPVDQT----TSRAYVSQFSADGSLFVAGF-------QASQIRIYDVERGWKIQKDILAKSLR 169 (279)
Q Consensus 102 ~d~~~~~~~~~~~~~~-~~l~~h----~~~V~~~~~spd~~~l~s~~-------~d~~i~iwd~~~~~~~~~~~~~~~~~ 169 (279)
.+..+..|.+.....+ ..+..| ...|..-..+++.++++..+ -.|.+.+|..+.+... ...+|.
T Consensus 123 T~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ----~ieGha 198 (494)
T 1bpo_A 123 TDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ----PIEGHA 198 (494)
T ss_dssp CSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE----EECCSE
T ss_pred cCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc----hheeee
Confidence 3556667776543333 345555 45677778899999886433 2367889999887432 245775
Q ss_pred cceEEEEECCC--C-CEEEEEeCC---CeEEEEECCCC-ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEE
Q 023642 170 WTVTDTSLSPD--Q-RHLVYASMS---PIVHIVDVGSG-TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGREL 242 (279)
Q Consensus 170 ~~v~~~~~sp~--~-~~l~~~~~d---~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l 242 (279)
+....+.+.-+ . ..++.+... +.++|.++... ... .........+.|.++. -..-..++..++.-..+
T Consensus 199 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~--~~f~kk~vdv~fppe~---~~DFPvamqvs~kygvi 273 (494)
T 1bpo_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGN--QPFPKKAVDVFFPPEA---QNDFPVAMQISEKHDVV 273 (494)
T ss_dssp EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTC--CCCCCEEEECCCCTTS---TTCCEEEEEEETTTTEE
T ss_pred eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCC--CCccceeeeeeCCccc---ccCceeEEEecccCCEE
Confidence 54433333211 1 234444432 78999998543 000 0010001111222221 11134577888887788
Q ss_pred EEecCCCeEEEEECCCCeEEEEEeCCCcc
Q 023642 243 VAGSSDDCIYVYDLEANKLSLRILAHTVN 271 (279)
Q Consensus 243 ~t~s~d~~i~vwd~~~~~~~~~~~~h~~~ 271 (279)
..-+.-|.|++||+.++.++..-+--...
T Consensus 274 yviTK~G~i~lyDleTgt~i~~nrIs~~~ 302 (494)
T 1bpo_A 274 FLITKYGYIHLYDLETGTCIYMNRISGET 302 (494)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSSC
T ss_pred EEEecCceEEEEecccceeeeeecccCCc
Confidence 88888999999999999988766543333
No 335
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=84.15 E-value=19 Score=30.85 Aligned_cols=66 Identities=14% Similarity=0.053 Sum_probs=36.6
Q ss_pred CCCeEEEEECCC---CCEEEEE-eC------------CCcEEEEEcCCC--eE--Eeeeee-c-cCCCcceEEEEECCCC
Q 023642 124 TSRAYVSQFSAD---GSLFVAG-FQ------------ASQIRIYDVERG--WK--IQKDIL-A-KSLRWTVTDTSLSPDQ 181 (279)
Q Consensus 124 ~~~V~~~~~spd---~~~l~s~-~~------------d~~i~iwd~~~~--~~--~~~~~~-~-~~~~~~v~~~~~sp~~ 181 (279)
...+..++|+|| +.+|..+ +. ...|.-|+...+ .. ...+.. . .........++|.|||
T Consensus 76 ~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG 155 (454)
T 1cru_A 76 QNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQ 155 (454)
T ss_dssp SCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTS
T ss_pred CCceeEEEECCCcCcCCEEEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCC
Confidence 466789999995 5555433 32 235666665432 11 111111 1 1111247899999999
Q ss_pred CEEEEEeC
Q 023642 182 RHLVYASM 189 (279)
Q Consensus 182 ~~l~~~~~ 189 (279)
.++++.+.
T Consensus 156 ~Lyv~~Gd 163 (454)
T 1cru_A 156 KIYYTIGD 163 (454)
T ss_dssp CEEEEECC
T ss_pred eEEEEECC
Confidence 87776543
No 336
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=83.19 E-value=15 Score=28.97 Aligned_cols=109 Identities=14% Similarity=0.127 Sum_probs=59.4
Q ss_pred CCCEEEEEeCCC-----cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeC-------CCeEEEEECCCCc
Q 023642 135 DGSLFVAGFQAS-----QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASM-------SPIVHIVDVGSGT 202 (279)
Q Consensus 135 d~~~l~s~~~d~-----~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~-------d~~i~i~d~~~~~ 202 (279)
++..++.|+.++ .+.+||+.+...... ............+.+ +++.++.|+. -..+.+||+.+..
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHV-APMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEE-CCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeec-CCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 567777777553 578899887743322 111111111222222 5666666653 2358899998877
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC-----CeEEEEECCCCeEE
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKLS 262 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d-----~~i~vwd~~~~~~~ 262 (279)
...+....... .....+. .++++++.|+.+ ..+.+||..+.+..
T Consensus 185 W~~~~~~p~~r--------------~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~ 233 (302)
T 2xn4_A 185 WTYIAEMSTRR--------------SGAGVGV--LNNLLYAVGGHDGPLVRKSVEVYDPTTNAWR 233 (302)
T ss_dssp EEEECCCSSCC--------------BSCEEEE--ETTEEEEECCBSSSSBCCCEEEEETTTTEEE
T ss_pred EEECCCCcccc--------------ccccEEE--ECCEEEEECCCCCCcccceEEEEeCCCCCEe
Confidence 65443221110 0111222 257777777754 36999999877543
No 337
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.19 E-value=1.7 Score=42.31 Aligned_cols=38 Identities=32% Similarity=0.210 Sum_probs=33.2
Q ss_pred cEEEEEEecCCCEEEEecCCCeEEEEECCCCeEEEEEe
Q 023642 229 GIFSLKFSTDGRELVAGSSDDCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 229 ~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~~~~~~~ 266 (279)
.+.+++..++..++++-+.|+++||||+.+++++.+..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 45566777888999999999999999999999998865
No 338
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=81.35 E-value=18 Score=28.58 Aligned_cols=108 Identities=12% Similarity=0.075 Sum_probs=59.6
Q ss_pred CCCEEEEEeC---------CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCC
Q 023642 135 DGSLFVAGFQ---------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGS 200 (279)
Q Consensus 135 d~~~l~s~~~---------d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~ 200 (279)
++.+++.|+. -..+.+||+.+....... ...........+.+ +++.++.|+.+ ..+.+||+.+
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~ 225 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELC-PMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKL 225 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTT
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECC-CccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCC
Confidence 5666677653 345889999887432221 11111111222222 56666666543 4689999988
Q ss_pred CceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC-----CeEEEEECCCCeE
Q 023642 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD-----DCIYVYDLEANKL 261 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d-----~~i~vwd~~~~~~ 261 (279)
.+...+....... .....+.+ ++++++.|+.+ ..+.+||..+.+.
T Consensus 226 ~~W~~~~~~p~~r--------------~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W 275 (306)
T 3ii7_A 226 NEWKMVSPMPWKG--------------VTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTETDKW 275 (306)
T ss_dssp TEEEECCCCSCCB--------------SCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTTTEE
T ss_pred CcEEECCCCCCCc--------------cceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCCCeE
Confidence 7765443221110 01122222 67777787743 4799999988653
No 339
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=80.41 E-value=20 Score=28.54 Aligned_cols=114 Identities=14% Similarity=0.181 Sum_probs=61.9
Q ss_pred CCCCEEEEEeC------CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-----CeEEEEECCCCc
Q 023642 134 ADGSLFVAGFQ------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-----PIVHIVDVGSGT 202 (279)
Q Consensus 134 pd~~~l~s~~~------d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-----~~i~i~d~~~~~ 202 (279)
.++..++.|+. -..+.+||+.+....... ...........+.+ +++.++.|+.+ ..+.+||+.+.+
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~-~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLA-PMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEEC-CCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECC-CCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 36677777764 236899999887432221 11111111222222 56677776643 357789998877
Q ss_pred eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCC--------------CeEEEEECCCCeEEEEEe
Q 023642 203 MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSD--------------DCIYVYDLEANKLSLRIL 266 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d--------------~~i~vwd~~~~~~~~~~~ 266 (279)
...+....... .....+ ..++++++.|+.+ ..+.+||+.+.+-...++
T Consensus 234 W~~~~~~p~~r--------------~~~~~~--~~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~ 295 (318)
T 2woz_A 234 WEVMTEFPQER--------------SSISLV--SLAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWAGMLK 295 (318)
T ss_dssp EEECCCCSSCC--------------BSCEEE--EETTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEEEEES
T ss_pred EEECCCCCCcc--------------cceEEE--EECCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEehhhcc
Confidence 65433221110 011112 2356777777643 468999999887655543
No 340
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=79.45 E-value=33 Score=31.17 Aligned_cols=115 Identities=13% Similarity=0.195 Sum_probs=63.5
Q ss_pred CCCCEEEEEeCCC--cEEEEEcCCCeEEeeeee--ccCCCcceEEEEECCC-CCEEEEEeC--C-----CeEEEEECCCC
Q 023642 134 ADGSLFVAGFQAS--QIRIYDVERGWKIQKDIL--AKSLRWTVTDTSLSPD-QRHLVYASM--S-----PIVHIVDVGSG 201 (279)
Q Consensus 134 pd~~~l~s~~~d~--~i~iwd~~~~~~~~~~~~--~~~~~~~v~~~~~sp~-~~~l~~~~~--d-----~~i~i~d~~~~ 201 (279)
.++..++.|+.++ .+.+||..+......... .........++.+..+ ++.++.|+. + ..+.+||+.+.
T Consensus 499 ~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~ 578 (695)
T 2zwa_A 499 PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAE 578 (695)
T ss_dssp TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTT
T ss_pred cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCC
Confidence 4788888887654 689999988743322110 1111222333555555 666667664 2 46889999887
Q ss_pred c------eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC--------CCeEEEEECCCCeEE
Q 023642 202 T------MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS--------DDCIYVYDLEANKLS 262 (279)
Q Consensus 202 ~------~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~--------d~~i~vwd~~~~~~~ 262 (279)
. ...+.... . ... ... ++....++++++.|+. ...|.+||..+.+..
T Consensus 579 ~w~~~~~W~~~~~~p-~--------~~R----~~~-~~~~~~~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W~ 639 (695)
T 2zwa_A 579 NATEPITVIKKLQHP-L--------FQR----YGS-QIKYITPRKLLIVGGTSPSGLFDRTNSIISLDPLSETLT 639 (695)
T ss_dssp CSSCCEEEEEEEECG-G--------GCC----BSC-EEEEEETTEEEEECCBCSSCCCCTTTSEEEEETTTTEEE
T ss_pred ccccceEEEEcCCCC-C--------CCc----ccc-eEEEeCCCEEEEECCccCCCCCCCCCeEEEEECCCCeEE
Confidence 7 22221100 0 000 011 2222333677777774 346999999987654
No 341
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=78.90 E-value=38 Score=30.79 Aligned_cols=119 Identities=15% Similarity=0.244 Sum_probs=65.9
Q ss_pred EEEECCCCCEEEEEeCC------CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCC--eEEEEECCC
Q 023642 129 VSQFSADGSLFVAGFQA------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP--IVHIVDVGS 200 (279)
Q Consensus 129 ~~~~spd~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~--~i~i~d~~~ 200 (279)
.+.+..++..++.|+.+ +.+.+||..+...... ........ -.+++...+++.++.|+.++ .+.+||..+
T Consensus 445 ~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~-~~~p~~R~-~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t 522 (695)
T 2zwa_A 445 FTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMI-KSLSHTRF-RHSACSLPDGNVLILGGVTEGPAMLLYNVTE 522 (695)
T ss_dssp EEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEEC-CCCSBCCB-SCEEEECTTSCEEEECCBCSSCSEEEEETTT
T ss_pred EEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEEC-CCCCCCcc-cceEEEEcCCEEEEECCCCCCCCEEEEECCC
Confidence 33443377777887754 3578999988643221 11111111 22333334788888877554 699999998
Q ss_pred CceeeeeccccccceeEEeeCCCCCccccEEEEEEecC-CCEEEEecC--C-----CeEEEEECCCCe
Q 023642 201 GTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD-GRELVAGSS--D-----DCIYVYDLEANK 260 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-g~~l~t~s~--d-----~~i~vwd~~~~~ 260 (279)
.....+........ .. .....+.+..+ ++.++.|+. + ..+.+||+.+.+
T Consensus 523 ~~W~~~~~~g~~p~-------~r----~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 523 EIFKDVTPKDEFFQ-------NS----LVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TEEEECCCSSGGGG-------SC----CBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CceEEccCCCCCCC-------cc----cceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 87654432111100 00 01123445555 667777765 2 468999998776
No 342
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=76.67 E-value=11 Score=33.60 Aligned_cols=61 Identities=23% Similarity=0.226 Sum_probs=41.1
Q ss_pred CCeEEEEECCCCCEEEEEeCC------------CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEE
Q 023642 125 SRAYVSQFSADGSLFVAGFQA------------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYA 187 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d------------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~ 187 (279)
...-.|+|+|+|++++.-..+ +.+.+.+..+++..+ +. .......++.++|+||++.|+..
T Consensus 476 ~~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~r-f~-~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR-FM-VGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEE-EE-ECCTTCEEEEEEECTTSSEEEEE
T ss_pred cCCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEE-EE-eCCCCccCcCeeECCCCCEEEEE
Confidence 345678999999977765432 345566666675433 22 22345689999999999988765
No 343
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=75.88 E-value=11 Score=33.65 Aligned_cols=59 Identities=14% Similarity=0.205 Sum_probs=39.1
Q ss_pred eEEEEECCCCCEEEEEeCC------------CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCC
Q 023642 172 VTDTSLSPDQRHLVYASMS------------PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDG 239 (279)
Q Consensus 172 v~~~~~sp~~~~l~~~~~d------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g 239 (279)
.=.|+|+|+|++++.-..+ ..+.+.+..+++...+.... ....++.++|+||+
T Consensus 478 PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P---------------~gaE~TG~~fspDg 542 (592)
T 3zwu_A 478 PDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP---------------IGCEVTGISFSPDQ 542 (592)
T ss_dssp EEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECC---------------TTCEEEEEEECTTS
T ss_pred CcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCC---------------CCccCcCeeECCCC
Confidence 4578999999977765543 24566666666654433211 11378999999999
Q ss_pred CEEEEe
Q 023642 240 RELVAG 245 (279)
Q Consensus 240 ~~l~t~ 245 (279)
+.|+..
T Consensus 543 ~tlfvn 548 (592)
T 3zwu_A 543 KTLFVG 548 (592)
T ss_dssp SEEEEE
T ss_pred CEEEEE
Confidence 987654
No 344
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=75.01 E-value=30 Score=27.51 Aligned_cols=114 Identities=18% Similarity=0.055 Sum_probs=60.0
Q ss_pred EEEECCCCCEEEEEeC----C-------CcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-------
Q 023642 129 VSQFSADGSLFVAGFQ----A-------SQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS------- 190 (279)
Q Consensus 129 ~~~~spd~~~l~s~~~----d-------~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d------- 190 (279)
..+...++..++.|+. + ..+.+||..+.+.... ............+.+ +++.++.|+.+
T Consensus 39 ~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~lyv~GG~~~~~~~~~ 115 (315)
T 4asc_A 39 VSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGM-PPLPSPRCLFGLGEA--LNSIYVVGGREIKDGERC 115 (315)
T ss_dssp EEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEEC-CCBSSCEESCEEEEE--TTEEEEECCEESSTTCCB
T ss_pred eEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEEC-CCCCcchhceeEEEE--CCEEEEEeCCcCCCCCcc
Confidence 3344457788888873 1 1277889887743221 111111111122222 55666666632
Q ss_pred -CeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC-C-----CeEEEEECCCCeE
Q 023642 191 -PIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS-D-----DCIYVYDLEANKL 261 (279)
Q Consensus 191 -~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~-d-----~~i~vwd~~~~~~ 261 (279)
..+.+||..+.+........... ..-..+ ..+++.++.|+. + ..+.+||..+.+-
T Consensus 116 ~~~~~~~d~~~~~W~~~~~~p~~r--------------~~~~~~--~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W 177 (315)
T 4asc_A 116 LDSVMCYDRLSFKWGESDPLPYVV--------------YGHTVL--SHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEW 177 (315)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCC--------------BSCEEE--EETTEEEEECCBCTTSCBCCCEEEEETTTTEE
T ss_pred cceEEEECCCCCcEeECCCCCCcc--------------cceeEE--EECCEEEEEeCCCCCCcccceEEEEeCCCCeE
Confidence 45899999887754433221110 011112 235667777765 2 3689999887654
No 345
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=73.39 E-value=14 Score=35.97 Aligned_cols=38 Identities=13% Similarity=0.165 Sum_probs=30.4
Q ss_pred ceEEEEECCCCCEEEEEeCCCeEEEEECCCCceeeeec
Q 023642 171 TVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTMESLAN 208 (279)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 208 (279)
.+.+++..++..++++-+.|+++|+|++.++++.....
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 34556667788999999999999999999998754433
No 346
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=72.55 E-value=38 Score=27.70 Aligned_cols=65 Identities=12% Similarity=0.181 Sum_probs=43.2
Q ss_pred CCCeEEEEECC-------CCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe
Q 023642 124 TSRAYVSQFSA-------DGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS 188 (279)
Q Consensus 124 ~~~V~~~~~sp-------d~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 188 (279)
......++|.+ +++++++.-..+.|...+++.+........+......+..+++.|||.++++..
T Consensus 270 ~~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~lyv~td 341 (353)
T 2g8s_A 270 SPAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGYLYVLTD 341 (353)
T ss_dssp CCCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSCEEEEEC
T ss_pred CcCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCcEEEEEe
Confidence 34577788864 467777777778888888876644333222223334689999999998666543
No 347
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=72.54 E-value=17 Score=32.29 Aligned_cols=60 Identities=13% Similarity=0.212 Sum_probs=39.7
Q ss_pred ceEEEEECCCCCEEEEEeC------------CCeEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecC
Q 023642 171 TVTDTSLSPDQRHLVYASM------------SPIVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTD 238 (279)
Q Consensus 171 ~v~~~~~sp~~~~l~~~~~------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~ 238 (279)
..-.|.|.++|.+.+.... ...+..++..+++...+.... .-..++.++|+||
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P---------------~~aEpnGiafSPD 541 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGP---------------IGCEVTGISFSPD 541 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECC---------------TTCEEEEEEECTT
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCC---------------CCccccCCEECCC
Confidence 4668999999988774432 125666777677764433210 0126899999999
Q ss_pred CCEEEEe
Q 023642 239 GRELVAG 245 (279)
Q Consensus 239 g~~l~t~ 245 (279)
++.|+..
T Consensus 542 ~ktLfV~ 548 (592)
T 4a9v_A 542 QKTLFVG 548 (592)
T ss_dssp SSEEEEE
T ss_pred CCEEEEE
Confidence 9988764
No 348
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=71.86 E-value=8.1 Score=31.54 Aligned_cols=59 Identities=14% Similarity=0.100 Sum_probs=30.0
Q ss_pred eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCC------eEEEEECCCCeEEEEE
Q 023642 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDD------CIYVYDLEANKLSLRI 265 (279)
Q Consensus 192 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~------~i~vwd~~~~~~~~~~ 265 (279)
.+.+||+.+.+...+...... . . .-.+ ...++++++.|+.+. .|.++++++++.+...
T Consensus 286 ~~~~yd~~~~~W~~~~~~p~~----------r--~--~~~~--~~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 286 STDIHLWHNGKWDKSGELSQG----------R--A--YGVS--LPWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp CCEEEECC---CEEEEECSSC----------C--B--SSEE--EEETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eEEEEecCCCceeeCCCCCCC----------c--c--ccee--EEeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 577899987765443221111 0 0 1112 234677888887542 4677788887766554
Q ss_pred e
Q 023642 266 L 266 (279)
Q Consensus 266 ~ 266 (279)
+
T Consensus 350 ~ 350 (357)
T 2uvk_A 350 L 350 (357)
T ss_dssp -
T ss_pred c
Confidence 3
No 349
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=71.72 E-value=78 Score=30.88 Aligned_cols=111 Identities=11% Similarity=0.057 Sum_probs=64.2
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCC------CCEEEEEeC-CCeEEEEEC
Q 023642 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPD------QRHLVYASM-SPIVHIVDV 198 (279)
Q Consensus 126 ~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~------~~~l~~~~~-d~~i~i~d~ 198 (279)
.|...+.+. .+++.++ ++.+.++.++.+..... . -......|.++++.|. +++++.|.. |++++|+.+
T Consensus 515 ~I~~As~n~--~~vvva~-g~~l~~fel~~~~L~~~-~-~~~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL 589 (1158)
T 3ei3_A 515 NISVASCNS--SQVVVAV-GRALYYLQIHPQELRQI-S-HTEMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKL 589 (1158)
T ss_dssp CCCEEEECS--SEEEEEE-TTEEEEEEEETTEEEEE-E-EEECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEET
T ss_pred EEEEEEeCC--CEEEEEE-CCEEEEEEeeCCceeee-c-ccCCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEEC
Confidence 344444442 3555554 56788888776532211 1 1233457999999863 368999997 999999999
Q ss_pred CCCceeeeeccccccceeEEeeCCCCCccccEEEEEEe--cCCCEEEEecCCCeEEEEEC
Q 023642 199 GSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFS--TDGRELVAGSSDDCIYVYDL 256 (279)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s--p~g~~l~t~s~d~~i~vwd~ 256 (279)
.+.+.......... ....++.+. ....+|..|-.||.+.-+.+
T Consensus 590 ~~l~~~~~~~L~~~---------------~~p~si~l~~~~~~~~L~igl~dG~l~~~~~ 634 (1158)
T 3ei3_A 590 PSFELLHKEMLGGE---------------IIPRSILMTTFESSHYLLCALGDGALFYFGL 634 (1158)
T ss_dssp TTCCEEEEEECCSS---------------CCEEEEEEEEETTEEEEEEEETTSEEEEEEE
T ss_pred CCCCeEEEEECCCC---------------CCCcEEEEEEeCCCcEEEEEeCCCeEEEEEE
Confidence 87655433222110 022333322 23356777778887654443
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=70.99 E-value=16 Score=30.06 Aligned_cols=28 Identities=11% Similarity=0.032 Sum_probs=23.8
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCeEEeee
Q 023642 135 DGSLFVAGFQASQIRIYDVERGWKIQKD 162 (279)
Q Consensus 135 d~~~l~s~~~d~~i~iwd~~~~~~~~~~ 162 (279)
.+..+++|+.++++...|+.+|+.+...
T Consensus 110 ~~g~Vy~Gs~~g~l~ald~~tG~~~W~~ 137 (339)
T 2be1_A 110 EDEKVYTGSMRTIMYTINMLNGEIISAF 137 (339)
T ss_dssp CCEEEEECEEEEEEEEEETTTCCEEEEE
T ss_pred cCCEEEEEecCCEEEEEECCCCcEEEEE
Confidence 4567889999999999999999887764
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=69.22 E-value=32 Score=30.58 Aligned_cols=63 Identities=22% Similarity=0.207 Sum_probs=41.8
Q ss_pred CCCeEEEEECCCCCEEEEEeC------------CCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe
Q 023642 124 TSRAYVSQFSADGSLFVAGFQ------------ASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS 188 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~------------d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~ 188 (279)
-.....|.|+++|.+.+.... .+.|..++..+++... +.. ......++.++|+||++.|+.+-
T Consensus 475 fnsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~-fl~-~P~~aEpnGiafSPD~ktLfV~v 549 (592)
T 4a9v_A 475 FNSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR-FMV-GPIGCEVTGISFSPDQKTLFVGI 549 (592)
T ss_dssp CCCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEE-EEE-CCTTCEEEEEEECTTSSEEEEEE
T ss_pred cCCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEE-EEe-CCCCccccCCEECCCCCEEEEEE
Confidence 355678999999998874322 1256666776775432 221 12234689999999999887664
No 352
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=66.82 E-value=53 Score=27.11 Aligned_cols=90 Identities=12% Similarity=0.170 Sum_probs=53.0
Q ss_pred eeeCCCCCeEEEEECC--C-CCEEEEEeCC---CcEEEEEcCCC---e-----EEee-eeeccCCCcceEEEEECCCCCE
Q 023642 119 PVDQTTSRAYVSQFSA--D-GSLFVAGFQA---SQIRIYDVERG---W-----KIQK-DILAKSLRWTVTDTSLSPDQRH 183 (279)
Q Consensus 119 ~l~~h~~~V~~~~~sp--d-~~~l~s~~~d---~~i~iwd~~~~---~-----~~~~-~~~~~~~~~~v~~~~~sp~~~~ 183 (279)
.++||......+.+.- . ..+|+.+... ++++|-++... . +... ........+...++..++.-..
T Consensus 194 ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygv 273 (365)
T 2xzh_A 194 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 273 (365)
T ss_dssp EECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTE
T ss_pred eeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCE
Confidence 4667765554443321 1 1244444332 58999998432 1 1111 1111222445567777777777
Q ss_pred EEEEeCCCeEEEEECCCCceeeeec
Q 023642 184 LVYASMSPIVHIVDVGSGTMESLAN 208 (279)
Q Consensus 184 l~~~~~d~~i~i~d~~~~~~~~~~~ 208 (279)
++.-..-|.+++||++++.+....+
T Consensus 274 iyviTK~G~ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 274 VFLITKYGYIHLYDLETGTCIYMNR 298 (365)
T ss_dssp EEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEeCCcEEEEEEcccCcEEEEec
Confidence 8888899999999999999865544
No 353
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=66.29 E-value=50 Score=26.62 Aligned_cols=70 Identities=11% Similarity=0.048 Sum_probs=37.1
Q ss_pred CCCEEEEEeC-CCcEEEEEcCC--CeEEeeeeecc-CCCcceEEEEECCCCCEEEEEeC-C---------CeEEEEECCC
Q 023642 135 DGSLFVAGFQ-ASQIRIYDVER--GWKIQKDILAK-SLRWTVTDTSLSPDQRHLVYASM-S---------PIVHIVDVGS 200 (279)
Q Consensus 135 d~~~l~s~~~-d~~i~iwd~~~--~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~-d---------~~i~i~d~~~ 200 (279)
++..++.|+. ...+.+||+.+ .+. ....... ........+.+ +++.++.|+. + ..+.+||..+
T Consensus 19 ~~~iyv~GG~~~~~~~~~d~~~~~~~W-~~~~~~p~~~R~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~v~~yd~~~ 95 (357)
T 2uvk_A 19 NDTVYIGLGSAGTAWYKLDTQAKDKKW-TALAAFPGGPRDQATSAFI--DGNLYVFGGIGKNSEGLTQVFNDVHKYNPKT 95 (357)
T ss_dssp TTEEEEECGGGTTCEEEEETTSSSCCE-EECCCCTTCCCBSCEEEEE--TTEEEEECCEEECTTSCEEECCCEEEEETTT
T ss_pred CCEEEEEeCcCCCeEEEEccccCCCCe-eECCCCCCCcCccceEEEE--CCEEEEEcCCCCCCCccceeeccEEEEeCCC
Confidence 5566666654 35788999863 221 1111111 11111222223 5666666654 2 4689999988
Q ss_pred Cceeeee
Q 023642 201 GTMESLA 207 (279)
Q Consensus 201 ~~~~~~~ 207 (279)
.+...+.
T Consensus 96 ~~W~~~~ 102 (357)
T 2uvk_A 96 NSWVKLM 102 (357)
T ss_dssp TEEEECS
T ss_pred CcEEECC
Confidence 7765443
No 354
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=63.77 E-value=53 Score=26.01 Aligned_cols=114 Identities=14% Similarity=0.098 Sum_probs=60.7
Q ss_pred EEECCCCCEEEEEeC----CC-------cEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCC-------C
Q 023642 130 SQFSADGSLFVAGFQ----AS-------QIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMS-------P 191 (279)
Q Consensus 130 ~~~spd~~~l~s~~~----d~-------~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d-------~ 191 (279)
.+...++..++.|+. ++ .+.+||..+.+.... ............+.+ +++.++.|+.+ .
T Consensus 51 ~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 127 (318)
T 2woz_A 51 SIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL-PPLPSARCLFGLGEV--DDKIYVVAGKDLQTEASLD 127 (318)
T ss_dssp EEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC-SCBSSCBCSCEEEEE--TTEEEEEEEEBTTTCCEEE
T ss_pred EEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC-CCCCccccccceEEE--CCEEEEEcCccCCCCcccc
Confidence 344567788888873 12 277889887743322 111111111222222 56666777653 3
Q ss_pred eEEEEECCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecC------CCeEEEEECCCCeEE
Q 023642 192 IVHIVDVGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSS------DDCIYVYDLEANKLS 262 (279)
Q Consensus 192 ~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~------d~~i~vwd~~~~~~~ 262 (279)
.+.+||..+.+............ +| ..+. .++++++.|+. -..+.+||..+.+..
T Consensus 128 ~~~~yd~~~~~W~~~~~~p~~r~----------~~----~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~ 188 (318)
T 2woz_A 128 SVLCYDPVAAKWSEVKNLPIKVY----------GH----NVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK 188 (318)
T ss_dssp EEEEEETTTTEEEEECCCSSCEE----------SC----EEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEE
T ss_pred eEEEEeCCCCCEeECCCCCCccc----------cc----EEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEE
Confidence 58889998877654432211100 01 1111 46777777764 235899999887643
No 355
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=61.91 E-value=16 Score=33.48 Aligned_cols=35 Identities=17% Similarity=0.153 Sum_probs=28.1
Q ss_pred CeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeee
Q 023642 126 RAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKD 162 (279)
Q Consensus 126 ~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~ 162 (279)
.|.++.+ +..++++-+.|.++|+|++.+++++...
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 3555555 4789999999999999999999877653
No 356
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=52.98 E-value=1.3e+02 Score=27.19 Aligned_cols=71 Identities=15% Similarity=0.081 Sum_probs=45.1
Q ss_pred CCeEEEEEC----CCCC---EEEEEeCCCcEEEE-EcCCCeEEeeeeeccCCCcceEEEEECCCC--CEEEEEeCCCeEE
Q 023642 125 SRAYVSQFS----ADGS---LFVAGFQASQIRIY-DVERGWKIQKDILAKSLRWTVTDTSLSPDQ--RHLVYASMSPIVH 194 (279)
Q Consensus 125 ~~V~~~~~s----pd~~---~l~s~~~d~~i~iw-d~~~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~d~~i~ 194 (279)
...+.++.. ++++ .+..|..+|+|.-. .......+...........+|..+.++++. .+|+.++.++.++
T Consensus 397 ~~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~ 476 (663)
T 1olz_A 397 VNYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNRFVYAGSNSGVVQ 476 (663)
T ss_dssp CCEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSCEEEEECSSCEEE
T ss_pred CceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCccEEEEEEcCeEEE
Confidence 346777763 4554 57789999988654 333332222222223345689999999988 8898888776554
Q ss_pred E
Q 023642 195 I 195 (279)
Q Consensus 195 i 195 (279)
|
T Consensus 477 v 477 (663)
T 1olz_A 477 A 477 (663)
T ss_dssp E
T ss_pred E
Confidence 4
No 357
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=50.66 E-value=1.2e+02 Score=26.13 Aligned_cols=91 Identities=12% Similarity=0.157 Sum_probs=56.6
Q ss_pred ceeeCCCCCeEEEEECCC---CCEEEEEeCC---CcEEEEEcCCC--------eEEee-eeeccCCCcceEEEEECCCCC
Q 023642 118 WPVDQTTSRAYVSQFSAD---GSLFVAGFQA---SQIRIYDVERG--------WKIQK-DILAKSLRWTVTDTSLSPDQR 182 (279)
Q Consensus 118 ~~l~~h~~~V~~~~~spd---~~~l~s~~~d---~~i~iwd~~~~--------~~~~~-~~~~~~~~~~v~~~~~sp~~~ 182 (279)
+.++||......+.+.-+ ..+|+.+... ++++|-++... ++... ........+...++..++.-.
T Consensus 192 Q~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg 271 (494)
T 1bpo_A 192 QPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD 271 (494)
T ss_dssp EEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT
T ss_pred chheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC
Confidence 346777666655544321 1245555443 78999998542 11111 111122234566788888777
Q ss_pred EEEEEeCCCeEEEEECCCCceeeeec
Q 023642 183 HLVYASMSPIVHIVDVGSGTMESLAN 208 (279)
Q Consensus 183 ~l~~~~~d~~i~i~d~~~~~~~~~~~ 208 (279)
.++.-..-|.+++||+.++.+....+
T Consensus 272 viyviTK~G~i~lyDleTgt~i~~nr 297 (494)
T 1bpo_A 272 VVFLITKYGYIHLYDLETGTCIYMNR 297 (494)
T ss_dssp EEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred EEEEEecCceEEEEecccceeeeeec
Confidence 88888899999999999999865544
No 358
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=47.15 E-value=50 Score=29.10 Aligned_cols=74 Identities=12% Similarity=0.025 Sum_probs=46.7
Q ss_pred CCeEEEEECCCC--CEEEEEeCCCcEEEEEcCCCe---EEeeeeeccCCCcceE-EEEECCCCCEEEEEeCCCeEEEEEC
Q 023642 125 SRAYVSQFSADG--SLFVAGFQASQIRIYDVERGW---KIQKDILAKSLRWTVT-DTSLSPDQRHLVYASMSPIVHIVDV 198 (279)
Q Consensus 125 ~~V~~~~~spd~--~~l~s~~~d~~i~iwd~~~~~---~~~~~~~~~~~~~~v~-~~~~sp~~~~l~~~~~d~~i~i~d~ 198 (279)
..++.++....+ ..+..|..+|+|.-..+.... .+...+.......+|. .+.+++++.+|+.++.++.++| .+
T Consensus 400 ~~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv-pl 478 (539)
T 3al9_A 400 DRLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV-PV 478 (539)
T ss_dssp SCEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTEEEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE-ES
T ss_pred cceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCccceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee-eh
Confidence 457777766533 356788999988766554321 1222222223345785 8999999999999888765555 34
Q ss_pred C
Q 023642 199 G 199 (279)
Q Consensus 199 ~ 199 (279)
.
T Consensus 479 ~ 479 (539)
T 3al9_A 479 E 479 (539)
T ss_dssp C
T ss_pred h
Confidence 4
No 359
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=43.89 E-value=1.9e+02 Score=26.28 Aligned_cols=116 Identities=15% Similarity=0.155 Sum_probs=68.8
Q ss_pred CCCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeecc-C-CCcceEEEEECCCCCEEEEEeCCCeEEEEECCCC
Q 023642 124 TSRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAK-S-LRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSG 201 (279)
Q Consensus 124 ~~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~-~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~ 201 (279)
...|.++...+++.+.+ |+.+ -|..++..++.......... . ....|.++...+++..|..+.. +-+..+|..++
T Consensus 145 ~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~-~Gl~~~~~~~~ 221 (758)
T 3ott_A 145 NNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTE-GYLFQYFPSTG 221 (758)
T ss_dssp CSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEE-EEEEEEETTTT
T ss_pred CCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEEC-CCCeEEcCCCC
Confidence 35688888888888665 4444 57888887764322110000 0 1224788888777765555553 35888898776
Q ss_pred ceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCe
Q 023642 202 TMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK 260 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~ 260 (279)
+....... . ...|.++....+|.+.+. +. +-+.+++..+++
T Consensus 222 ~~~~~~~l---------~-------~~~i~~i~~d~~g~lWig-T~-~Gl~~~~~~~~~ 262 (758)
T 3ott_A 222 QIKQTEAF---------H-------NNSIKSLALDGNGDLLAG-TD-NGLYVYHNDTTP 262 (758)
T ss_dssp EEEEEEEE---------E-------EEEEEEEEECTTCCEEEE-ET-TEEEEECCTTSC
T ss_pred eEEeccCC---------C-------CCeEEEEEEcCCCCEEEE-eC-CceeEEecCCCc
Confidence 54322110 0 125788888777776553 33 347888876654
No 360
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=43.42 E-value=1.7e+02 Score=29.63 Aligned_cols=90 Identities=13% Similarity=0.190 Sum_probs=50.8
Q ss_pred eeeCCCCCeEEEEEC--C-CCCEEEEEeC---CCcEEEEEcCCC---e-EE-ee----eeeccCCCcceEEEEECCCCCE
Q 023642 119 PVDQTTSRAYVSQFS--A-DGSLFVAGFQ---ASQIRIYDVERG---W-KI-QK----DILAKSLRWTVTDTSLSPDQRH 183 (279)
Q Consensus 119 ~l~~h~~~V~~~~~s--p-d~~~l~s~~~---d~~i~iwd~~~~---~-~~-~~----~~~~~~~~~~v~~~~~sp~~~~ 183 (279)
.++||......+... + ....++.+.. .++++|-++... . .. .+ ........+...++..++.-..
T Consensus 193 ~iegha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~ 272 (1630)
T 1xi4_A 193 PIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDV 272 (1630)
T ss_pred hhhHhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccCE
Confidence 356676555444442 2 2234444432 268999888543 1 00 00 0111111233456667776667
Q ss_pred EEEEeCCCeEEEEECCCCceeeeec
Q 023642 184 LVYASMSPIVHIVDVGSGTMESLAN 208 (279)
Q Consensus 184 l~~~~~d~~i~i~d~~~~~~~~~~~ 208 (279)
+..-..-|.+++||+.++.+....+
T Consensus 273 iy~itk~G~~~~~d~~t~~~i~~~r 297 (1630)
T 1xi4_A 273 VFLITKYGYIHLYDLETGTCIYMNR 297 (1630)
T ss_pred EEEEecCceEEEEecccchhhhhcc
Confidence 7777888999999999998855443
No 361
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=42.05 E-value=91 Score=27.08 Aligned_cols=70 Identities=13% Similarity=0.106 Sum_probs=44.1
Q ss_pred CeEEEEECC----CCC--EEEEEeCCCcEEEEEcCCCe-------EEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCe
Q 023642 126 RAYVSQFSA----DGS--LFVAGFQASQIRIYDVERGW-------KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI 192 (279)
Q Consensus 126 ~V~~~~~sp----d~~--~l~s~~~d~~i~iwd~~~~~-------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~ 192 (279)
..+.++... ++. .+..|..+|+|.-.-+.... .+...+.......+|..+.++++..+|+.++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 567776653 243 46788999988665543221 11111112223468999999999999999998876
Q ss_pred EEE
Q 023642 193 VHI 195 (279)
Q Consensus 193 i~i 195 (279)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 362
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=38.57 E-value=2.3e+02 Score=25.83 Aligned_cols=33 Identities=9% Similarity=0.024 Sum_probs=24.1
Q ss_pred EEEE-ECCCCCEEEEE-eCC----CcEEEEEcCCCeEEe
Q 023642 128 YVSQ-FSADGSLFVAG-FQA----SQIRIYDVERGWKIQ 160 (279)
Q Consensus 128 ~~~~-~spd~~~l~s~-~~d----~~i~iwd~~~~~~~~ 160 (279)
..+. ++||+++++.+ +.. ..++++|+.+++.+.
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~ 170 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVK 170 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECT
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCC
Confidence 4455 89999988665 333 379999999996654
No 363
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=35.33 E-value=1.8e+02 Score=23.56 Aligned_cols=125 Identities=13% Similarity=0.113 Sum_probs=71.1
Q ss_pred CCeEEE-EECC--CCCEEEEEeCCCcEEEEEcCCCeEE----eeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEE
Q 023642 125 SRAYVS-QFSA--DGSLFVAGFQASQIRIYDVERGWKI----QKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVD 197 (279)
Q Consensus 125 ~~V~~~-~~sp--d~~~l~s~~~d~~i~iwd~~~~~~~----~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d 197 (279)
..|.++ .+.+ +...++..+.+|.++.-.+..-... .....+.. .+.+..+........|+..+..|.+..+.
T Consensus 95 e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke-~D~lv~~~~~~~~d~ill~T~~G~~~rf~ 173 (327)
T 3uc1_A 95 ERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRD-NDELVGAVLCSAGDDLLLVSANGQSIRFS 173 (327)
T ss_dssp CCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCT-TCCEEEEEEECTTCEEEEEETTSEEEEEE
T ss_pred CEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECC-CCEEEEEEEecCCCEEEEEECCCeEEEEE
Confidence 444444 4443 5789999999999999887542111 11112233 33455555555566788888889988888
Q ss_pred CCCCceeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEEC
Q 023642 198 VGSGTMESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDL 256 (279)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~ 256 (279)
....+.............+.+.. + ..|.++...+++.+|+..+..|.++.-.+
T Consensus 174 ~~~~eip~~gr~a~Gv~~i~L~~-~-----d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 174 ATDEALRPMGRATSGVQGMRFNI-D-----DRLLSLNVVREGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp CCTTTSCCCCTTSBCEESSCCCT-T-----CCEEEEEECCTTCEEEEEETTSEEEEEEG
T ss_pred CcccccCcCCcCCCCeeeecCCC-C-----CEEEEEEEECCCCEEEEEeCCCcEEEEEH
Confidence 76211111111111111112211 1 15666666566678888888888887765
No 364
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=31.87 E-value=1.7e+02 Score=26.50 Aligned_cols=75 Identities=13% Similarity=0.152 Sum_probs=45.0
Q ss_pred CCeEEEEEC----CCCC--EEEEEeCCCcEEEE-EcCCCe------EEeeeeeccCCCcceEEEEECCCCCEEEEEeCCC
Q 023642 125 SRAYVSQFS----ADGS--LFVAGFQASQIRIY-DVERGW------KIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSP 191 (279)
Q Consensus 125 ~~V~~~~~s----pd~~--~l~s~~~d~~i~iw-d~~~~~------~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~ 191 (279)
...+.++.+ ++++ .+..|..+|+|.-- -...+. .+...........+|..+.++++..+|+.++.++
T Consensus 412 ~~lT~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~ 491 (667)
T 4gz8_A 412 YQFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAG 491 (667)
T ss_dssp CCEEEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSC
T ss_pred cceeEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCE
Confidence 345666653 3443 56788999987533 222111 1111112234556899999999999999999887
Q ss_pred eEEEEECCC
Q 023642 192 IVHIVDVGS 200 (279)
Q Consensus 192 ~i~i~d~~~ 200 (279)
.++| .+..
T Consensus 492 V~kV-Pl~~ 499 (667)
T 4gz8_A 492 VAQL-PLHR 499 (667)
T ss_dssp EEEE-ESCC
T ss_pred EEEE-Ehhh
Confidence 6666 4443
No 365
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=28.39 E-value=3.3e+02 Score=24.58 Aligned_cols=117 Identities=10% Similarity=0.016 Sum_probs=65.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEeCCCeEEEEECCCCcee
Q 023642 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPIVHIVDVGSGTME 204 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~i~i~d~~~~~~~ 204 (279)
..|.++...++|.+-+.++..+-|..+|..+++..............+.++....+|.+.+.. ..| +..||..++...
T Consensus 472 ~~i~~i~~d~~g~lWi~~~t~~Gl~~~d~~~~~~~~~~~~~~~~~~~~~~i~~d~~g~lWigt-~~G-l~~~~~~~~~~~ 549 (758)
T 3ott_A 472 MFINQIIPDNEGNVWVLLYNNKGIDKINPRTREVTKLFADELTGEKSPNYLLCDEDGLLWVGF-HGG-VMRINPKDESQQ 549 (758)
T ss_dssp SCEEEEEECTTSCEEEEETTCSSEEEEETTTTEEEEECTTTSCGGGCEEEEEECTTSCEEEEE-TTE-EEEECC--CCCC
T ss_pred ceeeeEEEcCCCCEEEEccCCCCcEEEeCCCCceEEecCCCcCCCcccceEEECCCCCEEEEe-cCc-eEEEecCCCceE
Confidence 358899999999876644334558889988774432110000112357788888888776554 444 778887766543
Q ss_pred eeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEecCCCeEEEEECCCCe
Q 023642 205 SLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGSSDDCIYVYDLEANK 260 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s~d~~i~vwd~~~~~ 260 (279)
... . .+ + -...|.++... +|.+.+ ++..| |..+|..+.+
T Consensus 550 ~~~-~----~g--l-------~~~~i~~i~~~-~g~lWi-~t~~G-l~~~~~~~~~ 588 (758)
T 3ott_A 550 SIS-F----GS--F-------SNNEILSMTCV-KNSIWV-STTNG-LWIIDRKTMD 588 (758)
T ss_dssp BCC-C----CC------------CCEEEEEEE-TTEEEE-EESSC-EEEEETTTCC
T ss_pred Eec-c----cC--C-------CccceEEEEEC-CCCEEE-ECCCC-eEEEcCCCce
Confidence 221 0 00 0 01257777653 565443 34444 7777776654
No 366
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=25.81 E-value=2.9e+02 Score=22.98 Aligned_cols=101 Identities=12% Similarity=0.146 Sum_probs=57.7
Q ss_pred cEEEEEcCCC--eEEeeeeec---cCCCcceEEEEEC---CC----CCEEEEEe-CCCeEEEEECCCCceeeeecccccc
Q 023642 147 QIRIYDVERG--WKIQKDILA---KSLRWTVTDTSLS---PD----QRHLVYAS-MSPIVHIVDVGSGTMESLANVTEIH 213 (279)
Q Consensus 147 ~i~iwd~~~~--~~~~~~~~~---~~~~~~v~~~~~s---p~----~~~l~~~~-~d~~i~i~d~~~~~~~~~~~~~~~~ 213 (279)
+|.+||+.+. +.++..... ......+..+.+. |. +.++..+. ...-|.++|+.+++...+.......
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~~p 203 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTFKA 203 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGGSC
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCCcc
Confidence 6888999988 776654321 1123467888887 32 33444444 5678999999998875444211111
Q ss_pred c-eeEEeeCCCC-CccccEEEEEEecC----CCEEEEecC
Q 023642 214 D-GLDFSAADDG-GYSFGIFSLKFSTD----GRELVAGSS 247 (279)
Q Consensus 214 ~-~~~~~~~~~~-~~~~~v~~~~~sp~----g~~l~t~s~ 247 (279)
. ...+.-.+.. .....+..++++|+ +++|.....
T Consensus 204 d~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl 243 (381)
T 3q6k_A 204 ERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG 243 (381)
T ss_dssp CSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES
T ss_pred ccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC
Confidence 1 1122211110 00136899999998 777765443
No 367
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=25.49 E-value=3e+02 Score=24.51 Aligned_cols=69 Identities=13% Similarity=0.063 Sum_probs=42.9
Q ss_pred CeEEEEEC----CCCC---EEEEEeCCCcEEEEEcCCCe-----E-EeeeeeccCCCcceEEEEECCCCCEEEEEeCCCe
Q 023642 126 RAYVSQFS----ADGS---LFVAGFQASQIRIYDVERGW-----K-IQKDILAKSLRWTVTDTSLSPDQRHLVYASMSPI 192 (279)
Q Consensus 126 ~V~~~~~s----pd~~---~l~s~~~d~~i~iwd~~~~~-----~-~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~ 192 (279)
..+.+++. .++. .+..|+.+|+|...-+.... . +.. +.......+|..+.++++...|+.++.++.
T Consensus 363 ~~T~IaVd~v~a~~g~~ytVlFLGT~~G~l~Kvv~~~~~~~~~~~~iee-i~~~~~~~pi~~L~ls~~~~~LyV~s~~~V 441 (590)
T 3nvq_A 363 HYQKVAVHRMQASHGETFHVLYLTTDRGTIHKVVEPGEQEHSFAFNIME-IQPFRRAAAIQTMSLDAERRKLYVSSQWEV 441 (590)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSCEEEEECCCSSTTCCCEEEEE-ECCCSSCCCCCEEEEETTTTEEEEECSSEE
T ss_pred cEEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCCcceeEEEEE-eeccCCCCceeeEEEcCCCCEEEEEecceE
Confidence 45556543 3443 56788999988765443221 1 111 111134557999999999999998887766
Q ss_pred EEE
Q 023642 193 VHI 195 (279)
Q Consensus 193 i~i 195 (279)
++|
T Consensus 442 ~qV 444 (590)
T 3nvq_A 442 SQV 444 (590)
T ss_dssp EEE
T ss_pred EEc
Confidence 655
No 368
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=25.20 E-value=2.2e+02 Score=24.94 Aligned_cols=74 Identities=16% Similarity=0.129 Sum_probs=47.0
Q ss_pred CCeEEEEECC-CC-CEEEEEeCCCcEEEEEcCCC-e-EEeeeeeccCCCcce-EEEEECCCCCEEEEEeCCCeEEEEECC
Q 023642 125 SRAYVSQFSA-DG-SLFVAGFQASQIRIYDVERG-W-KIQKDILAKSLRWTV-TDTSLSPDQRHLVYASMSPIVHIVDVG 199 (279)
Q Consensus 125 ~~V~~~~~sp-d~-~~l~s~~~d~~i~iwd~~~~-~-~~~~~~~~~~~~~~v-~~~~~sp~~~~l~~~~~d~~i~i~d~~ 199 (279)
...+.++... ++ ..+..|+.+|+|...-+..+ . .+...+.. ....+| ..+.++++..+|+.++.++.++|- +.
T Consensus 387 ~~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~vp-l~ 464 (528)
T 3ol2_B 387 IQLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKVP-VA 464 (528)
T ss_dssp CCEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSSEEEEECSSCEEEEE-SC
T ss_pred CceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCCEEEEEeCCEEEEEE-hh
Confidence 4577777664 33 34567899999876665421 1 11111222 344577 489999999999999888877763 44
Q ss_pred C
Q 023642 200 S 200 (279)
Q Consensus 200 ~ 200 (279)
.
T Consensus 465 ~ 465 (528)
T 3ol2_B 465 S 465 (528)
T ss_dssp C
T ss_pred h
Confidence 3
No 369
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=24.47 E-value=3.1e+02 Score=22.82 Aligned_cols=107 Identities=6% Similarity=-0.053 Sum_probs=58.4
Q ss_pred CCCeEEEEECCC----CCEEEEEeCCCcEEEEEcCC-----CeEEeeeeec--cCCCcceEEEEEC-CCCCEEEEEeCCC
Q 023642 124 TSRAYVSQFSAD----GSLFVAGFQASQIRIYDVER-----GWKIQKDILA--KSLRWTVTDTSLS-PDQRHLVYASMSP 191 (279)
Q Consensus 124 ~~~V~~~~~spd----~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~~~--~~~~~~v~~~~~s-p~~~~l~~~~~d~ 191 (279)
...|..++++|+ ++.|.-..-.+ -++|.+.+ ......+... ++....-..+++. .+|.++++--...
T Consensus 219 ~~Gi~gIaLsp~~~~~~~~LYf~plss-~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~~~~~D~~~G~ly~~~~~~~ 297 (381)
T 3q6k_A 219 KAGIFGITLGDRDSEGNRPAYYLAGSA-IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAIALAYDPKTKVIFFAEANTK 297 (381)
T ss_dssp CCCEEEEEECCCCTTSCCEEEEEESSC-SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEEEEEECTTTCEEEEEESSSS
T ss_pred ccCceEEEecCCcCCCCeEEEEEECCC-CcEEEEEHHHhhCcchhhceEEeeecCCCCCcceEEEeCCCCeEEEEeccCC
Confidence 368999999998 77776665443 23444321 1110111111 1111223456675 5777777777888
Q ss_pred eEEEEECCC-Cc----eeeeeccccccceeEEeeCCCCCccccEEEEEEecCCCEEEEec
Q 023642 192 IVHIVDVGS-GT----MESLANVTEIHDGLDFSAADDGGYSFGIFSLKFSTDGRELVAGS 246 (279)
Q Consensus 192 ~i~i~d~~~-~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g~~l~t~s 246 (279)
.|..|+..+ .- ...+..-. .-.++..+++.++|.+.+...
T Consensus 298 aI~~w~~~~~~~~~~n~~~l~~d~---------------~l~~pd~~~i~~~g~Lwv~sn 342 (381)
T 3q6k_A 298 QVSCWNTQKMPLRMKNTDVVYTSS---------------RFVFGTDISVDSKGGLWFMSN 342 (381)
T ss_dssp EEEEEETTSCSBCGGGEEEEEECT---------------TCCSEEEEEECTTSCEEEEEC
T ss_pred eEEEEeCCCCccccCceEEEEECC---------------CccccCeEEECCCCeEEEEEC
Confidence 999999876 21 11111100 112677788877777655544
No 370
>3elq_A Arylsulfate sulfotransferase; beta propeller, protein-substrate complex, periplasm, transesterification, phenol, bacteria; 2.00A {Escherichia coli} PDB: 3ett_A* 3ets_A*
Probab=23.34 E-value=3.9e+02 Score=23.66 Aligned_cols=140 Identities=11% Similarity=0.114 Sum_probs=75.6
Q ss_pred CCeEEEEECCCCCEEEEEeCCCcEEEEEcCCCeEEeeeeeccCCCcceEEEEECCCCCEEEEEe--------------CC
Q 023642 125 SRAYVSQFSADGSLFVAGFQASQIRIYDVERGWKIQKDILAKSLRWTVTDTSLSPDQRHLVYAS--------------MS 190 (279)
Q Consensus 125 ~~V~~~~~spd~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~--------------~d 190 (279)
+.++...-.++|.+++.-+ ..+...|.... .+.......+....-..+...|+|+.|+.+. .+
T Consensus 207 g~l~~~~g~~nG~l~~g~G--~~i~elD~~Gk-vv~~~~lp~g~~~~HHD~~~l~nGn~Lv~v~~~d~~~~dG~~~~~vd 283 (571)
T 3elq_A 207 GYLMGIRETPRGTFTAVQG--QHWYEFDMMGQ-VLEDHKLPRGFADATHESIETPNGTVLLRVGKSNYRRDDGVHVTTIR 283 (571)
T ss_dssp SCCEEEEECTTSCEEEEEB--TEEEEECTTCC-EEEEEECCTTEECBCSCEEECTTSCEEEEEEETTEECTTSCEECCCS
T ss_pred CeEEEEEecCCCCEEEecC--cEEEEECCCCc-EEEEEECCCCccccccceEEcCCCcEEEEEecccccCCCCcccceec
Confidence 4555666667888766433 34777776533 3333222111011123466788999887553 13
Q ss_pred CeEEEEECCCCceeeeecccccccee-----------------EEe-------e-----CC------CCCccccEEEEEE
Q 023642 191 PIVHIVDVGSGTMESLANVTEIHDGL-----------------DFS-------A-----AD------DGGYSFGIFSLKF 235 (279)
Q Consensus 191 ~~i~i~d~~~~~~~~~~~~~~~~~~~-----------------~~~-------~-----~~------~~~~~~~v~~~~~ 235 (279)
..|...| .+|+.............. ... . .+ ....-..++++.+
T Consensus 284 D~I~EVD-~tGeVv~eW~~~dhld~~~~~~~~~~d~~~~~~~~~~~~~G~~~~~~~~~~~g~~~g~~~~~Dw~HiNsv~~ 362 (571)
T 3elq_A 284 DHILEVD-KSGRVVDVWDLTKILDPKRDALLGALDAGAVCVNVDLAHAGQQAKLEPDTPFGDALGVGPGRNWAHVNSIAY 362 (571)
T ss_dssp CEEEEEC-TTSCEEEEEEHHHHSCTTCCTTGGGSBTTC-------CCCSCBCCCCTTCCSSSSSCSSTTSCSCCEEEEEE
T ss_pred cEEEEEC-CCCCEEEEEEhHHccCcccccchhccccccccccccccccccccccccccccccccccCCCCCCcEecceeE
Confidence 3566667 677764333321111000 000 0 00 0113345899999
Q ss_pred ecC-CCEEEEecCCCeEEEEECCCCeEEEEEeCCCc
Q 023642 236 STD-GRELVAGSSDDCIYVYDLEANKLSLRILAHTV 270 (279)
Q Consensus 236 sp~-g~~l~t~s~d~~i~vwd~~~~~~~~~~~~h~~ 270 (279)
.+. +.+|+++-.- .|...|. +++.+-.+-++..
T Consensus 363 d~~dd~~liSsR~~-~I~~Id~-tG~V~W~LGg~~~ 396 (571)
T 3elq_A 363 DAKDDSIILSSRHQ-GVVKIGR-DKQVKWILAPSKG 396 (571)
T ss_dssp ETTTTEEEEEETTT-EEEEEET-TSCEEEEESCSTT
T ss_pred cCCCCEEEEECCcc-EEEEEcC-CCcEEEEECCCCC
Confidence 984 5677766555 7777785 8988888877653
Done!