Query 023645
Match_columns 279
No_of_seqs 368 out of 3019
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 10:23:02 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023645.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023645hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3r3h_A O-methyltransferase, SA 100.0 1.6E-37 5.4E-42 268.2 21.8 216 64-279 4-220 (242)
2 3dr5_A Putative O-methyltransf 100.0 3.2E-36 1.1E-40 256.6 22.8 204 69-278 5-212 (221)
3 3c3y_A Pfomt, O-methyltransfer 100.0 7.1E-35 2.4E-39 250.7 25.9 216 64-279 12-236 (237)
4 1sui_A Caffeoyl-COA O-methyltr 100.0 4.8E-35 1.6E-39 253.3 23.2 216 64-279 21-246 (247)
5 3cbg_A O-methyltransferase; cy 100.0 2.1E-34 7.3E-39 246.8 26.8 222 58-279 10-232 (232)
6 3tr6_A O-methyltransferase; ce 100.0 4.7E-34 1.6E-38 242.6 28.1 218 62-279 5-224 (225)
7 2avd_A Catechol-O-methyltransf 100.0 1.2E-32 3.9E-37 234.6 27.6 212 68-279 17-229 (229)
8 3duw_A OMT, O-methyltransferas 100.0 1.2E-32 4.2E-37 233.6 27.6 209 70-279 8-222 (223)
9 3tfw_A Putative O-methyltransf 100.0 5.8E-32 2E-36 234.0 26.3 208 69-279 12-225 (248)
10 3ntv_A MW1564 protein; rossman 100.0 3.3E-32 1.1E-36 233.1 21.3 207 65-279 18-231 (232)
11 2hnk_A SAM-dependent O-methylt 100.0 6.2E-31 2.1E-35 225.9 27.9 215 65-279 5-231 (239)
12 3c3p_A Methyltransferase; NP_9 100.0 1.4E-30 4.6E-35 219.3 21.1 203 68-279 6-209 (210)
13 3u81_A Catechol O-methyltransf 100.0 8.4E-28 2.9E-32 204.0 22.7 195 69-279 6-213 (221)
14 2gpy_A O-methyltransferase; st 100.0 9.8E-28 3.4E-32 204.9 22.2 206 68-279 4-214 (233)
15 3cvo_A Methyltransferase-like 99.8 2.2E-18 7.6E-23 143.5 15.4 151 96-264 9-179 (202)
16 2wk1_A NOVP; transferase, O-me 99.7 7.7E-18 2.6E-22 147.3 10.5 160 102-278 85-280 (282)
17 2b2c_A Spermidine synthase; be 99.7 2.4E-17 8.2E-22 146.9 11.9 148 118-278 107-268 (314)
18 2o07_A Spermidine synthase; st 99.7 4.2E-17 1.4E-21 144.7 12.2 147 118-278 94-255 (304)
19 3fpf_A Mtnas, putative unchara 99.7 3.4E-16 1.2E-20 137.4 17.6 108 113-230 116-223 (298)
20 3jwg_A HEN1, methyltransferase 99.7 1E-16 3.5E-21 134.8 13.2 163 103-272 13-194 (219)
21 3jwh_A HEN1; methyltransferase 99.7 1E-16 3.5E-21 134.8 12.7 163 103-272 13-194 (217)
22 3njr_A Precorrin-6Y methylase; 99.7 3.4E-16 1.2E-20 131.0 15.3 119 102-231 38-156 (204)
23 3e05_A Precorrin-6Y C5,15-meth 99.7 3.8E-16 1.3E-20 130.1 15.2 121 103-231 24-144 (204)
24 3p9n_A Possible methyltransfer 99.7 6.5E-16 2.2E-20 127.2 15.6 107 118-231 43-155 (189)
25 2bm8_A Cephalosporin hydroxyla 99.7 5.3E-17 1.8E-21 139.0 9.3 116 105-230 67-188 (236)
26 4gek_A TRNA (CMO5U34)-methyltr 99.7 3.3E-16 1.1E-20 136.1 13.4 116 109-232 58-181 (261)
27 2esr_A Methyltransferase; stru 99.7 3.5E-16 1.2E-20 127.2 12.6 116 109-231 21-140 (177)
28 3hm2_A Precorrin-6Y C5,15-meth 99.7 2.4E-16 8.1E-21 127.9 10.9 116 108-231 14-129 (178)
29 1uir_A Polyamine aminopropyltr 99.7 5E-16 1.7E-20 138.5 13.7 149 118-278 76-241 (314)
30 3mti_A RRNA methylase; SAM-dep 99.7 1.6E-15 5.5E-20 124.1 15.0 135 118-268 21-167 (185)
31 3f4k_A Putative methyltransfer 99.7 5.2E-16 1.8E-20 133.4 12.5 119 108-234 35-155 (257)
32 1nkv_A Hypothetical protein YJ 99.7 1.1E-15 3.7E-20 131.4 14.3 123 103-234 20-145 (256)
33 1mjf_A Spermidine synthase; sp 99.7 9E-16 3.1E-20 134.7 14.0 145 118-278 74-238 (281)
34 3orh_A Guanidinoacetate N-meth 99.7 1.1E-16 3.9E-21 136.9 7.1 111 118-236 59-177 (236)
35 3eey_A Putative rRNA methylase 99.7 3.2E-15 1.1E-19 123.6 15.7 140 117-268 20-171 (197)
36 3kkz_A Uncharacterized protein 99.7 7.9E-16 2.7E-20 133.4 12.2 118 109-234 36-155 (267)
37 2fhp_A Methylase, putative; al 99.6 3.2E-15 1.1E-19 122.1 14.6 110 118-231 43-156 (187)
38 3mb5_A SAM-dependent methyltra 99.6 1.6E-15 5.6E-20 130.4 13.4 120 101-229 75-194 (255)
39 2ift_A Putative methylase HI07 99.6 1.5E-15 5.3E-20 126.6 12.0 110 118-233 52-167 (201)
40 1l3i_A Precorrin-6Y methyltran 99.6 9.3E-15 3.2E-19 119.4 15.4 120 102-230 16-135 (192)
41 3dlc_A Putative S-adenosyl-L-m 99.6 2.1E-15 7.3E-20 125.9 11.6 106 121-234 45-153 (219)
42 1xj5_A Spermidine synthase 1; 99.6 2.9E-15 9.9E-20 134.5 13.2 113 118-235 119-242 (334)
43 1ixk_A Methyltransferase; open 99.6 9.4E-15 3.2E-19 130.2 16.4 125 102-233 101-250 (315)
44 3m6w_A RRNA methylase; rRNA me 99.6 7.7E-15 2.6E-19 136.8 16.4 123 104-233 86-233 (464)
45 1xdz_A Methyltransferase GIDB; 99.6 3.5E-15 1.2E-19 127.6 12.7 105 118-228 69-173 (240)
46 3grz_A L11 mtase, ribosomal pr 99.6 8.5E-15 2.9E-19 121.9 14.7 103 118-231 59-161 (205)
47 2fpo_A Methylase YHHF; structu 99.6 3.4E-15 1.2E-19 124.5 12.3 104 119-230 54-161 (202)
48 3hem_A Cyclopropane-fatty-acyl 99.6 5.6E-15 1.9E-19 130.5 14.2 107 117-234 70-188 (302)
49 3lpm_A Putative methyltransfer 99.6 5.2E-15 1.8E-19 128.0 13.6 114 108-227 37-174 (259)
50 3dxy_A TRNA (guanine-N(7)-)-me 99.6 4.4E-15 1.5E-19 125.5 12.6 105 119-228 34-149 (218)
51 1iy9_A Spermidine synthase; ro 99.6 3.9E-15 1.3E-19 130.2 12.4 106 118-229 74-189 (275)
52 1ws6_A Methyltransferase; stru 99.6 1.5E-14 5.2E-19 116.3 14.7 107 119-232 41-150 (171)
53 3m4x_A NOL1/NOP2/SUN family pr 99.6 1.2E-14 4.1E-19 135.3 15.7 125 103-233 89-238 (456)
54 1dus_A MJ0882; hypothetical pr 99.6 6.1E-15 2.1E-19 120.7 12.1 105 116-230 49-158 (194)
55 2nxc_A L11 mtase, ribosomal pr 99.6 4.7E-14 1.6E-18 121.9 17.7 135 118-279 119-254 (254)
56 3ajd_A Putative methyltransfer 99.6 3.3E-14 1.1E-18 124.2 16.6 122 109-233 73-215 (274)
57 3g89_A Ribosomal RNA small sub 99.6 6.2E-15 2.1E-19 127.1 11.8 103 119-227 80-182 (249)
58 1inl_A Spermidine synthase; be 99.6 7.7E-15 2.6E-19 129.7 12.5 106 118-229 89-205 (296)
59 2ozv_A Hypothetical protein AT 99.6 5.3E-15 1.8E-19 128.3 11.2 119 108-227 25-168 (260)
60 3dh0_A SAM dependent methyltra 99.6 2.4E-14 8.3E-19 120.0 14.8 113 115-234 33-148 (219)
61 2yxd_A Probable cobalt-precorr 99.6 5.8E-14 2E-18 113.8 16.6 114 103-230 19-132 (183)
62 2fk8_A Methoxy mycolic acid sy 99.6 4.1E-15 1.4E-19 132.1 10.1 106 118-234 89-199 (318)
63 2fca_A TRNA (guanine-N(7)-)-me 99.6 1.5E-14 5.2E-19 121.6 12.9 104 119-228 38-152 (213)
64 3adn_A Spermidine synthase; am 99.6 6.9E-15 2.4E-19 129.8 11.0 106 118-229 82-198 (294)
65 4dzr_A Protein-(glutamine-N5) 99.6 8.8E-15 3E-19 121.8 11.0 120 104-228 11-164 (215)
66 1yzh_A TRNA (guanine-N(7)-)-me 99.6 1.3E-14 4.3E-19 121.8 11.8 104 119-228 41-155 (214)
67 2b3t_A Protein methyltransfera 99.6 2.4E-14 8.4E-19 124.9 14.1 117 103-228 91-237 (276)
68 3bus_A REBM, methyltransferase 99.6 1.4E-14 4.6E-19 125.7 12.3 110 117-234 59-171 (273)
69 3lbf_A Protein-L-isoaspartate 99.6 1.3E-14 4.5E-19 121.0 11.2 113 103-228 61-173 (210)
70 3gu3_A Methyltransferase; alph 99.6 8.7E-15 3E-19 128.2 10.5 109 115-232 18-129 (284)
71 3evz_A Methyltransferase; NYSG 99.6 2.7E-14 9.3E-19 120.8 13.1 136 117-275 53-211 (230)
72 2pt6_A Spermidine synthase; tr 99.6 1.7E-14 5.8E-19 128.9 12.4 106 118-229 115-230 (321)
73 3g07_A 7SK snRNA methylphospha 99.6 9.7E-15 3.3E-19 128.6 10.6 115 118-234 45-225 (292)
74 2igt_A SAM dependent methyltra 99.6 1.5E-13 5.1E-18 123.3 18.2 109 119-232 153-275 (332)
75 1jsx_A Glucose-inhibited divis 99.6 2.3E-14 7.9E-19 119.2 12.1 100 119-228 65-164 (207)
76 1o54_A SAM-dependent O-methylt 99.6 3.6E-14 1.2E-18 123.9 13.5 119 102-229 95-213 (277)
77 1kpg_A CFA synthase;, cyclopro 99.6 5.2E-14 1.8E-18 123.1 14.6 107 117-234 62-173 (287)
78 1nv8_A HEMK protein; class I a 99.6 5.4E-14 1.8E-18 123.5 14.6 117 102-228 103-248 (284)
79 3a27_A TYW2, uncharacterized p 99.6 1.7E-14 5.8E-19 125.9 11.0 111 111-231 111-221 (272)
80 2frn_A Hypothetical protein PH 99.6 3.3E-14 1.1E-18 124.5 12.9 105 118-232 124-228 (278)
81 1pjz_A Thiopurine S-methyltran 99.6 1.7E-14 5.9E-19 120.3 10.5 116 103-227 7-138 (203)
82 2yxl_A PH0851 protein, 450AA l 99.6 4.1E-14 1.4E-18 132.0 14.2 126 103-233 243-393 (450)
83 2o57_A Putative sarcosine dime 99.6 2.2E-14 7.6E-19 126.0 11.6 111 116-234 79-192 (297)
84 2pwy_A TRNA (adenine-N(1)-)-me 99.5 5.7E-14 2E-18 120.6 13.9 119 101-229 78-198 (258)
85 1sqg_A SUN protein, FMU protei 99.5 1.4E-13 4.7E-18 127.7 17.4 158 103-278 230-426 (429)
86 1zx0_A Guanidinoacetate N-meth 99.5 1.2E-14 4.2E-19 123.7 9.6 106 118-231 59-172 (236)
87 4htf_A S-adenosylmethionine-de 99.5 2.9E-14 9.9E-19 124.7 12.2 103 120-230 69-174 (285)
88 3g5t_A Trans-aconitate 3-methy 99.5 5.3E-14 1.8E-18 124.0 13.9 109 119-227 36-147 (299)
89 2b25_A Hypothetical protein; s 99.5 4.6E-14 1.6E-18 126.6 13.5 121 102-228 88-218 (336)
90 3sso_A Methyltransferase; macr 99.5 1.6E-13 5.5E-18 124.7 16.8 148 119-279 216-392 (419)
91 1vl5_A Unknown conserved prote 99.5 2.7E-14 9.1E-19 123.2 11.1 109 114-232 32-143 (260)
92 1dl5_A Protein-L-isoaspartate 99.5 3E-14 1E-18 127.0 11.5 116 104-229 60-175 (317)
93 1xxl_A YCGJ protein; structura 99.5 4.9E-14 1.7E-18 120.2 12.3 118 106-233 8-128 (239)
94 3gjy_A Spermidine synthase; AP 99.5 3.4E-14 1.2E-18 126.1 11.6 103 121-229 91-200 (317)
95 3ckk_A TRNA (guanine-N(7)-)-me 99.5 4.1E-14 1.4E-18 120.9 11.7 105 119-228 46-167 (235)
96 3kr9_A SAM-dependent methyltra 99.5 3.1E-14 1.1E-18 120.6 10.7 113 111-230 6-120 (225)
97 3dtn_A Putative methyltransfer 99.5 1.9E-14 6.3E-19 122.0 9.4 106 117-233 42-152 (234)
98 3ocj_A Putative exported prote 99.5 7.4E-15 2.5E-19 130.0 7.1 109 117-232 116-230 (305)
99 2gb4_A Thiopurine S-methyltran 99.5 7.2E-14 2.5E-18 120.6 13.0 121 102-230 51-192 (252)
100 2yxe_A Protein-L-isoaspartate 99.5 4.7E-14 1.6E-18 118.1 11.4 115 104-228 62-176 (215)
101 1i9g_A Hypothetical protein RV 99.5 6E-14 2E-18 122.2 12.4 124 98-229 78-203 (280)
102 3fzg_A 16S rRNA methylase; met 99.5 2.7E-13 9.2E-18 111.2 15.4 146 118-278 48-196 (200)
103 2pbf_A Protein-L-isoaspartate 99.5 8.7E-14 3E-18 117.5 13.1 120 104-228 63-192 (227)
104 3mgg_A Methyltransferase; NYSG 99.5 3.6E-14 1.2E-18 123.3 10.9 108 117-232 35-145 (276)
105 1u2z_A Histone-lysine N-methyl 99.5 1.6E-13 5.3E-18 126.8 15.7 125 105-235 228-365 (433)
106 3vc1_A Geranyl diphosphate 2-C 99.5 3.1E-14 1.1E-18 126.3 10.3 110 117-234 115-226 (312)
107 2i7c_A Spermidine synthase; tr 99.5 6E-14 2E-18 123.2 12.0 106 118-229 77-192 (283)
108 4dcm_A Ribosomal RNA large sub 99.5 4.1E-14 1.4E-18 129.0 11.2 106 115-228 218-333 (375)
109 3c0k_A UPF0064 protein YCCW; P 99.5 1.9E-13 6.3E-18 125.5 15.6 110 117-230 218-340 (396)
110 3gdh_A Trimethylguanosine synt 99.5 5.1E-15 1.8E-19 126.3 4.5 110 110-229 69-181 (241)
111 2xvm_A Tellurite resistance pr 99.5 1.3E-13 4.6E-18 113.4 12.9 105 114-229 27-136 (199)
112 3bwc_A Spermidine synthase; SA 99.5 1.2E-13 4E-18 122.5 12.8 106 118-228 94-209 (304)
113 2b78_A Hypothetical protein SM 99.5 2.1E-13 7.1E-18 124.8 14.9 109 118-230 211-332 (385)
114 3lcc_A Putative methyl chlorid 99.5 5.6E-14 1.9E-18 119.3 10.3 105 119-233 66-175 (235)
115 1nt2_A Fibrillarin-like PRE-rR 99.5 7.3E-14 2.5E-18 117.3 10.6 104 118-228 56-160 (210)
116 3htx_A HEN1; HEN1, small RNA m 99.5 4.3E-13 1.5E-17 130.8 17.4 156 109-272 711-900 (950)
117 2frx_A Hypothetical protein YE 99.5 1.6E-13 5.5E-18 128.7 13.9 126 102-233 98-250 (479)
118 4dmg_A Putative uncharacterize 99.5 2.6E-13 9E-18 124.3 14.8 102 119-230 214-327 (393)
119 2vdv_E TRNA (guanine-N(7)-)-me 99.5 7.9E-14 2.7E-18 119.6 10.7 105 119-228 49-172 (246)
120 2as0_A Hypothetical protein PH 99.5 1.9E-13 6.4E-18 125.5 13.9 108 119-230 217-336 (396)
121 3k6r_A Putative transferase PH 99.5 1.1E-13 3.9E-18 120.8 11.8 104 118-231 124-227 (278)
122 2p7i_A Hypothetical protein; p 99.5 4.6E-14 1.6E-18 120.0 9.1 107 110-231 33-143 (250)
123 3uwp_A Histone-lysine N-methyl 99.5 2.3E-13 8E-18 124.0 14.2 117 113-234 167-293 (438)
124 3ofk_A Nodulation protein S; N 99.5 4.1E-14 1.4E-18 118.4 8.5 108 110-230 42-155 (216)
125 4df3_A Fibrillarin-like rRNA/T 99.5 4.6E-14 1.6E-18 120.1 8.9 106 117-228 75-181 (233)
126 2yvl_A TRMI protein, hypotheti 99.5 1.4E-13 4.9E-18 117.5 12.0 117 102-229 74-190 (248)
127 3m70_A Tellurite resistance pr 99.5 1.8E-13 6.2E-18 119.6 12.9 101 117-229 118-223 (286)
128 1g8a_A Fibrillarin-like PRE-rR 99.5 8.4E-14 2.9E-18 117.7 10.1 103 118-228 72-177 (227)
129 3v97_A Ribosomal RNA large sub 99.5 2.7E-13 9.2E-18 132.8 15.0 116 113-235 533-663 (703)
130 3lec_A NADB-rossmann superfami 99.5 9.8E-14 3.4E-18 117.7 10.4 105 119-230 21-126 (230)
131 1i1n_A Protein-L-isoaspartate 99.5 1.5E-13 5.2E-18 115.9 11.6 104 117-229 75-182 (226)
132 1wxx_A TT1595, hypothetical pr 99.5 2.1E-13 7.1E-18 124.6 13.3 110 114-230 205-326 (382)
133 1yb2_A Hypothetical protein TA 99.5 4.4E-14 1.5E-18 123.2 8.4 112 109-230 100-212 (275)
134 3ujc_A Phosphoethanolamine N-m 99.5 9.3E-14 3.2E-18 119.5 10.1 107 117-234 53-164 (266)
135 2ex4_A Adrenal gland protein A 99.5 6.3E-14 2.1E-18 119.5 8.9 116 108-232 64-188 (241)
136 1wzn_A SAM-dependent methyltra 99.5 2.4E-13 8.1E-18 116.5 12.4 99 119-229 41-145 (252)
137 4fsd_A Arsenic methyltransfera 99.5 1E-13 3.6E-18 126.6 10.7 118 117-234 81-208 (383)
138 1jg1_A PIMT;, protein-L-isoasp 99.5 1.3E-13 4.4E-18 117.3 10.3 115 103-229 75-189 (235)
139 3mcz_A O-methyltransferase; ad 99.5 8.5E-13 2.9E-17 118.8 16.1 111 118-235 177-293 (352)
140 3tma_A Methyltransferase; thum 99.5 2.3E-13 7.7E-18 123.0 12.1 120 102-228 186-316 (354)
141 3bkx_A SAM-dependent methyltra 99.5 3E-13 1E-17 117.3 12.1 114 116-234 40-164 (275)
142 3thr_A Glycine N-methyltransfe 99.5 4.5E-13 1.5E-17 117.4 13.3 119 105-229 43-175 (293)
143 1fbn_A MJ fibrillarin homologu 99.5 1.3E-13 4.5E-18 117.0 9.4 104 118-228 73-177 (230)
144 3id6_C Fibrillarin-like rRNA/T 99.5 2.7E-13 9.2E-18 115.5 11.2 106 117-228 74-180 (232)
145 3gnl_A Uncharacterized protein 99.5 2.7E-13 9.3E-18 116.0 11.0 111 113-230 14-126 (244)
146 3dmg_A Probable ribosomal RNA 99.5 2.8E-13 9.4E-18 123.7 11.8 114 104-228 213-339 (381)
147 3ou2_A SAM-dependent methyltra 99.5 2.7E-13 9.2E-18 113.2 10.8 110 108-232 35-149 (218)
148 3gwz_A MMCR; methyltransferase 99.5 1E-12 3.4E-17 119.5 15.2 107 118-234 201-312 (369)
149 2kw5_A SLR1183 protein; struct 99.5 2.4E-13 8.1E-18 112.6 10.0 102 121-233 31-135 (202)
150 1y8c_A S-adenosylmethionine-de 99.5 3.6E-13 1.2E-17 114.3 11.2 109 108-228 24-141 (246)
151 4hg2_A Methyltransferase type 99.5 1.1E-13 3.8E-18 119.8 8.0 94 120-229 40-135 (257)
152 1vbf_A 231AA long hypothetical 99.5 3.2E-13 1.1E-17 114.2 10.6 112 103-229 54-165 (231)
153 3r0q_C Probable protein argini 99.5 2.8E-13 9.7E-18 123.5 11.0 106 116-231 60-171 (376)
154 2ipx_A RRNA 2'-O-methyltransfe 99.4 3.2E-13 1.1E-17 114.7 10.6 103 118-228 76-181 (233)
155 3q7e_A Protein arginine N-meth 99.4 2.8E-13 9.5E-18 122.3 10.6 106 116-230 63-174 (349)
156 3h2b_A SAM-dependent methyltra 99.4 4.5E-13 1.6E-17 110.9 11.1 109 108-232 31-144 (203)
157 3hnr_A Probable methyltransfer 99.4 1.6E-13 5.5E-18 115.0 8.3 110 109-234 36-150 (220)
158 2cmg_A Spermidine synthase; tr 99.4 3.7E-14 1.3E-18 123.1 4.5 96 119-228 72-170 (262)
159 3g5l_A Putative S-adenosylmeth 99.4 2E-13 7E-18 117.0 9.0 99 118-228 43-144 (253)
160 1o9g_A RRNA methyltransferase; 99.4 7.6E-14 2.6E-18 119.9 6.2 109 119-229 51-214 (250)
161 3dp7_A SAM-dependent methyltra 99.4 6.6E-13 2.3E-17 120.4 12.6 111 118-235 178-293 (363)
162 2r3s_A Uncharacterized protein 99.4 1.7E-12 5.9E-17 115.8 15.2 108 118-234 164-276 (335)
163 2p8j_A S-adenosylmethionine-de 99.4 3.5E-13 1.2E-17 111.9 9.9 115 107-231 11-130 (209)
164 3e23_A Uncharacterized protein 99.4 3E-13 1E-17 112.8 9.2 98 117-231 41-143 (211)
165 1r18_A Protein-L-isoaspartate( 99.4 2E-13 6.8E-18 115.5 8.2 116 104-228 67-193 (227)
166 1ri5_A MRNA capping enzyme; me 99.4 6.7E-13 2.3E-17 116.1 11.6 106 118-230 63-175 (298)
167 1qzz_A RDMB, aclacinomycin-10- 99.4 2.6E-12 9.1E-17 116.5 15.8 104 117-230 180-288 (374)
168 2y1w_A Histone-arginine methyl 99.4 7.8E-13 2.7E-17 119.3 12.0 104 115-228 46-154 (348)
169 3pfg_A N-methyltransferase; N, 99.4 4.1E-13 1.4E-17 115.9 9.6 98 119-232 50-154 (263)
170 1ve3_A Hypothetical protein PH 99.4 6.9E-13 2.4E-17 111.5 10.8 102 119-231 38-144 (227)
171 2p35_A Trans-aconitate 2-methy 99.4 2.6E-13 9E-18 116.4 8.4 98 118-229 32-132 (259)
172 2fyt_A Protein arginine N-meth 99.4 7.9E-13 2.7E-17 118.9 11.8 105 114-227 59-169 (340)
173 3dli_A Methyltransferase; PSI- 99.4 3.1E-13 1.1E-17 115.1 8.7 98 118-231 40-142 (240)
174 2yqz_A Hypothetical protein TT 99.4 6.6E-13 2.3E-17 114.1 10.8 101 117-228 37-140 (263)
175 2h00_A Methyltransferase 10 do 99.4 1.6E-13 5.4E-18 118.0 6.7 121 105-227 46-190 (254)
176 2vdw_A Vaccinia virus capping 99.4 1.4E-12 4.9E-17 115.4 12.8 110 119-230 48-170 (302)
177 2dul_A N(2),N(2)-dimethylguano 99.4 1.7E-12 5.8E-17 118.3 13.5 104 118-229 46-164 (378)
178 3g2m_A PCZA361.24; SAM-depende 99.4 2E-13 6.9E-18 120.2 7.1 103 120-232 83-193 (299)
179 1g6q_1 HnRNP arginine N-methyl 99.4 1E-12 3.6E-17 117.6 11.7 105 115-228 34-144 (328)
180 3i53_A O-methyltransferase; CO 99.4 6.9E-13 2.3E-17 118.6 10.5 107 119-235 169-280 (332)
181 3p2e_A 16S rRNA methylase; met 99.4 2.3E-13 7.9E-18 115.5 7.0 103 118-227 23-137 (225)
182 3e8s_A Putative SAM dependent 99.4 1.1E-12 3.7E-17 109.9 10.9 107 113-231 46-154 (227)
183 4hc4_A Protein arginine N-meth 99.4 7E-13 2.4E-17 120.5 10.4 104 117-230 81-190 (376)
184 2ip2_A Probable phenazine-spec 99.4 1.7E-12 5.8E-17 116.0 12.8 104 121-234 169-277 (334)
185 3i9f_A Putative type 11 methyl 99.4 8.2E-13 2.8E-17 106.3 9.6 101 116-234 14-117 (170)
186 2qfm_A Spermine synthase; sper 99.4 1.8E-12 6.1E-17 116.5 12.7 107 119-229 188-314 (364)
187 2qe6_A Uncharacterized protein 99.4 5.3E-12 1.8E-16 110.2 15.4 110 119-232 77-199 (274)
188 3ccf_A Cyclopropane-fatty-acyl 99.4 6.3E-13 2.2E-17 115.8 9.5 101 114-230 52-155 (279)
189 3sm3_A SAM-dependent methyltra 99.4 6.1E-13 2.1E-17 112.2 8.5 104 118-230 29-142 (235)
190 3axs_A Probable N(2),N(2)-dime 99.4 8.9E-13 3E-17 120.4 10.1 105 119-229 52-158 (392)
191 3d2l_A SAM-dependent methyltra 99.4 1.1E-12 3.8E-17 111.3 10.1 97 119-228 33-136 (243)
192 3bkw_A MLL3908 protein, S-aden 99.4 7.1E-13 2.4E-17 112.5 8.9 108 110-229 34-144 (243)
193 1x19_A CRTF-related protein; m 99.4 4.2E-12 1.4E-16 114.8 14.3 107 117-233 188-299 (359)
194 2yx1_A Hypothetical protein MJ 99.4 2.2E-12 7.5E-17 115.9 12.1 102 118-233 194-295 (336)
195 3q87_B N6 adenine specific DNA 99.4 3.3E-12 1.1E-16 103.4 12.0 104 103-229 6-123 (170)
196 2pjd_A Ribosomal RNA small sub 99.4 8E-13 2.7E-17 119.0 9.2 100 118-228 195-302 (343)
197 1xtp_A LMAJ004091AAA; SGPP, st 99.4 8.8E-13 3E-17 112.8 9.1 103 118-231 92-199 (254)
198 2b9e_A NOL1/NOP2/SUN domain fa 99.4 5.8E-12 2E-16 111.8 14.5 126 103-233 86-238 (309)
199 2aot_A HMT, histamine N-methyl 99.4 2.6E-12 8.8E-17 112.9 12.1 108 119-228 52-171 (292)
200 1tw3_A COMT, carminomycin 4-O- 99.4 2.3E-12 8E-17 116.3 11.8 105 117-231 181-290 (360)
201 3mq2_A 16S rRNA methyltransfer 99.4 5.8E-13 2E-17 111.7 6.9 103 117-228 25-139 (218)
202 3b3j_A Histone-arginine methyl 99.4 2E-12 6.9E-17 121.4 10.6 101 117-227 156-261 (480)
203 3bgv_A MRNA CAP guanine-N7 met 99.4 5.1E-12 1.7E-16 112.0 12.5 108 119-230 34-156 (313)
204 3tm4_A TRNA (guanine N2-)-meth 99.4 7.4E-12 2.5E-16 114.0 13.8 117 102-227 201-328 (373)
205 3m33_A Uncharacterized protein 99.4 8.6E-13 2.9E-17 111.6 7.0 92 118-226 47-139 (226)
206 3bt7_A TRNA (uracil-5-)-methyl 99.4 7E-12 2.4E-16 114.0 13.5 127 97-230 188-327 (369)
207 3ggd_A SAM-dependent methyltra 99.4 3.5E-12 1.2E-16 108.7 10.8 107 117-231 54-165 (245)
208 3ege_A Putative methyltransfer 99.4 6.7E-13 2.3E-17 114.7 6.4 111 104-231 19-132 (261)
209 3l8d_A Methyltransferase; stru 99.4 1.4E-12 4.9E-17 110.7 8.3 101 118-231 52-155 (242)
210 2jjq_A Uncharacterized RNA met 99.3 5.6E-12 1.9E-16 116.6 12.7 117 98-228 268-386 (425)
211 2qm3_A Predicted methyltransfe 99.3 2.5E-12 8.6E-17 117.1 10.2 102 119-228 172-277 (373)
212 3bxo_A N,N-dimethyltransferase 99.3 3.7E-12 1.3E-16 107.8 10.6 99 118-232 39-144 (239)
213 2i62_A Nicotinamide N-methyltr 99.3 5.6E-13 1.9E-17 114.7 4.9 110 118-231 55-200 (265)
214 1ej0_A FTSJ; methyltransferase 99.3 2.7E-12 9.3E-17 102.9 8.6 102 117-230 20-137 (180)
215 2gs9_A Hypothetical protein TT 99.3 1.6E-12 5.6E-17 108.2 7.5 97 119-232 36-135 (211)
216 3iv6_A Putative Zn-dependent a 99.3 2.4E-12 8.2E-17 111.5 8.7 105 111-228 37-147 (261)
217 1wy7_A Hypothetical protein PH 99.3 2.8E-11 9.7E-16 100.4 14.6 111 103-228 30-148 (207)
218 3bzb_A Uncharacterized protein 99.3 1.1E-11 3.6E-16 108.6 12.2 108 118-227 78-203 (281)
219 3cgg_A SAM-dependent methyltra 99.3 8E-12 2.8E-16 102.0 9.9 106 108-230 37-148 (195)
220 3tos_A CALS11; methyltransfera 99.3 1.2E-11 4.2E-16 106.3 11.3 148 119-277 69-254 (257)
221 2pxx_A Uncharacterized protein 99.3 2E-12 7E-17 107.4 6.3 102 118-230 41-160 (215)
222 2avn_A Ubiquinone/menaquinone 99.3 7.3E-12 2.5E-16 108.0 9.3 95 119-229 54-152 (260)
223 3giw_A Protein of unknown func 99.3 1.6E-11 5.5E-16 106.6 11.4 166 66-233 21-204 (277)
224 2a14_A Indolethylamine N-methy 99.3 1.1E-12 3.7E-17 113.6 3.9 110 118-231 54-199 (263)
225 4a6d_A Hydroxyindole O-methylt 99.3 1E-10 3.6E-15 105.6 16.1 107 117-234 177-288 (353)
226 2g72_A Phenylethanolamine N-me 99.3 7.4E-12 2.5E-16 109.6 8.1 110 119-230 71-216 (289)
227 1ne2_A Hypothetical protein TA 99.3 4E-11 1.4E-15 99.1 12.1 107 103-228 32-146 (200)
228 2plw_A Ribosomal RNA methyltra 99.3 2.3E-11 8E-16 100.4 10.4 99 118-228 21-153 (201)
229 1zq9_A Probable dimethyladenos 99.3 2.8E-11 9.5E-16 106.2 11.4 100 102-212 11-110 (285)
230 1p91_A Ribosomal RNA large sub 99.3 1.7E-11 5.9E-16 105.9 9.5 95 118-229 84-178 (269)
231 1uwv_A 23S rRNA (uracil-5-)-me 99.3 3.9E-11 1.3E-15 111.3 12.5 122 100-228 263-388 (433)
232 2f8l_A Hypothetical protein LM 99.2 3.2E-11 1.1E-15 108.4 11.4 118 102-228 109-255 (344)
233 1af7_A Chemotaxis receptor met 99.2 2E-11 7E-16 106.4 9.0 105 119-228 105-251 (274)
234 4e2x_A TCAB9; kijanose, tetron 99.2 1.2E-11 4.1E-16 113.9 7.9 101 118-230 106-209 (416)
235 3dou_A Ribosomal RNA large sub 99.2 3.9E-11 1.3E-15 99.1 10.1 96 118-228 24-138 (191)
236 1vlm_A SAM-dependent methyltra 99.2 2.2E-11 7.4E-16 102.2 7.8 98 113-231 41-141 (219)
237 3lst_A CALO1 methyltransferase 99.2 1.7E-11 5.8E-16 110.4 7.1 106 117-235 182-292 (348)
238 3cc8_A Putative methyltransfer 99.2 1.6E-11 5.6E-16 102.9 6.1 98 118-230 31-131 (230)
239 3lcv_B Sisomicin-gentamicin re 99.2 4.8E-11 1.6E-15 102.2 8.9 145 118-278 131-280 (281)
240 3hp7_A Hemolysin, putative; st 99.2 7.3E-12 2.5E-16 109.9 3.3 97 119-227 85-183 (291)
241 2qy6_A UPF0209 protein YFCK; s 99.2 4.6E-11 1.6E-15 103.2 8.3 108 119-227 60-211 (257)
242 2h1r_A Dimethyladenosine trans 99.2 7.9E-11 2.7E-15 104.0 10.0 97 102-210 25-121 (299)
243 2nyu_A Putative ribosomal RNA 99.2 1.1E-10 3.7E-15 95.9 10.2 100 118-229 21-145 (196)
244 3opn_A Putative hemolysin; str 99.2 7.8E-12 2.7E-16 106.5 3.2 98 118-227 36-135 (232)
245 3o4f_A Spermidine synthase; am 99.2 1.6E-10 5.4E-15 101.2 11.1 106 117-228 81-197 (294)
246 3reo_A (ISO)eugenol O-methyltr 99.2 9.4E-11 3.2E-15 106.4 9.5 99 119-235 203-306 (368)
247 2r6z_A UPF0341 protein in RSP 99.1 4.4E-11 1.5E-15 103.5 6.7 89 111-204 75-170 (258)
248 2zfu_A Nucleomethylin, cerebra 99.1 1.4E-10 4.7E-15 96.8 9.5 96 108-231 56-153 (215)
249 2ih2_A Modification methylase 99.1 6.3E-11 2.2E-15 109.0 7.9 110 101-227 21-162 (421)
250 3k0b_A Predicted N6-adenine-sp 99.1 1.5E-10 5.2E-15 106.0 9.8 118 103-227 185-348 (393)
251 3p9c_A Caffeic acid O-methyltr 99.1 2.3E-10 8E-15 103.7 11.0 99 118-234 200-303 (364)
252 3frh_A 16S rRNA methylase; met 99.1 1.3E-09 4.4E-14 92.5 14.0 145 115-278 101-250 (253)
253 4fzv_A Putative methyltransfer 99.1 1.3E-09 4.6E-14 98.2 14.8 124 106-235 135-290 (359)
254 3ldu_A Putative methylase; str 99.1 1.8E-10 6.2E-15 105.2 9.1 117 104-227 180-342 (385)
255 3ldg_A Putative uncharacterize 99.1 3.6E-10 1.2E-14 103.1 11.1 118 103-227 178-341 (384)
256 3gru_A Dimethyladenosine trans 99.1 7.5E-10 2.6E-14 97.4 12.3 103 101-215 32-134 (295)
257 1m6y_A S-adenosyl-methyltransf 99.1 8E-10 2.7E-14 97.6 12.4 87 116-206 23-109 (301)
258 1fp1_D Isoliquiritigenin 2'-O- 99.1 1.1E-10 3.8E-15 106.0 5.8 99 118-234 208-311 (372)
259 2okc_A Type I restriction enzy 99.1 1.6E-10 5.5E-15 107.5 6.9 120 101-227 153-305 (445)
260 4azs_A Methyltransferase WBDD; 99.1 3.6E-10 1.2E-14 108.3 9.2 102 118-227 65-171 (569)
261 3ll7_A Putative methyltransfer 99.0 3.3E-10 1.1E-14 103.8 8.3 77 120-204 94-172 (410)
262 1fp2_A Isoflavone O-methyltran 99.0 2.6E-10 8.8E-15 102.7 6.6 99 118-234 187-293 (352)
263 3tqs_A Ribosomal RNA small sub 99.0 2.4E-09 8.3E-14 92.3 11.7 106 101-216 11-117 (255)
264 2oyr_A UPF0341 protein YHIQ; a 99.0 1.5E-10 5.2E-15 99.9 3.7 105 111-223 78-194 (258)
265 2ar0_A M.ecoki, type I restric 99.0 1.7E-09 5.7E-14 103.0 9.9 123 100-227 150-310 (541)
266 1qam_A ERMC' methyltransferase 99.0 3.5E-09 1.2E-13 90.6 10.8 93 102-206 13-105 (244)
267 2xyq_A Putative 2'-O-methyl tr 99.0 2.5E-09 8.6E-14 93.8 9.7 90 117-229 61-171 (290)
268 2oxt_A Nucleoside-2'-O-methylt 98.9 1.7E-10 5.7E-15 100.2 1.5 100 118-230 73-186 (265)
269 3fut_A Dimethyladenosine trans 98.9 3.3E-09 1.1E-13 92.2 9.7 104 100-216 28-131 (271)
270 2p41_A Type II methyltransfera 98.9 2.7E-10 9.4E-15 100.8 2.3 96 118-228 81-190 (305)
271 1zg3_A Isoflavanone 4'-O-methy 98.9 2.3E-09 7.9E-14 96.7 8.2 99 118-234 192-298 (358)
272 4gqb_A Protein arginine N-meth 98.9 3.7E-09 1.2E-13 101.6 9.7 100 120-227 358-465 (637)
273 2wa2_A Non-structural protein 98.9 1.1E-10 3.8E-15 101.9 -0.7 99 118-229 81-193 (276)
274 3c6k_A Spermine synthase; sper 98.9 5.5E-09 1.9E-13 94.2 9.4 146 119-279 205-378 (381)
275 1yub_A Ermam, rRNA methyltrans 98.9 5.2E-11 1.8E-15 102.0 -4.3 112 104-227 14-143 (245)
276 3khk_A Type I restriction-modi 98.9 3.6E-09 1.2E-13 100.6 7.8 157 98-268 224-427 (544)
277 3uzu_A Ribosomal RNA small sub 98.8 1.7E-08 5.8E-13 88.1 11.2 110 101-216 24-135 (279)
278 3lkd_A Type I restriction-modi 98.8 2.6E-08 9.1E-13 94.5 12.3 158 98-268 196-389 (542)
279 3v97_A Ribosomal RNA large sub 98.8 1.3E-08 4.6E-13 99.6 9.0 121 103-227 174-345 (703)
280 3ftd_A Dimethyladenosine trans 98.7 3.1E-08 1.1E-12 85.0 9.5 115 101-228 13-130 (249)
281 3ua3_A Protein arginine N-meth 98.7 4.5E-08 1.5E-12 94.3 11.2 106 120-227 410-532 (745)
282 3s1s_A Restriction endonucleas 98.7 1E-07 3.5E-12 93.1 13.3 176 80-268 274-497 (878)
283 1qyr_A KSGA, high level kasuga 98.7 7.3E-08 2.5E-12 82.8 9.6 104 104-215 6-110 (252)
284 2ld4_A Anamorsin; methyltransf 98.6 1.1E-08 3.7E-13 82.6 2.6 90 117-231 10-103 (176)
285 1wg8_A Predicted S-adenosylmet 98.5 5.6E-07 1.9E-11 77.9 10.7 83 116-207 19-101 (285)
286 2oo3_A Protein involved in cat 98.3 4.2E-07 1.4E-11 78.8 5.1 128 109-257 82-214 (283)
287 2k4m_A TR8_protein, UPF0146 pr 98.2 6.3E-06 2.2E-10 64.2 9.6 85 119-228 35-120 (153)
288 3tka_A Ribosomal RNA small sub 98.2 6.8E-06 2.3E-10 72.8 10.8 85 117-206 55-139 (347)
289 3ufb_A Type I restriction-modi 98.1 1.1E-05 3.9E-10 76.4 10.4 156 98-268 196-393 (530)
290 3evf_A RNA-directed RNA polyme 98.0 5.7E-06 2E-10 71.2 5.7 105 117-232 72-186 (277)
291 4auk_A Ribosomal RNA large sub 98.0 1.3E-05 4.3E-10 72.1 7.7 72 117-205 209-280 (375)
292 2px2_A Genome polyprotein [con 98.0 3E-06 1E-10 72.1 2.7 96 117-228 71-182 (269)
293 3gcz_A Polyprotein; flavivirus 97.9 4.7E-06 1.6E-10 71.8 3.4 146 69-228 39-200 (282)
294 3eld_A Methyltransferase; flav 97.7 0.00023 8E-09 61.7 11.0 152 65-228 24-190 (300)
295 3p8z_A Mtase, non-structural p 97.7 0.00019 6.4E-09 60.3 9.7 99 117-227 76-184 (267)
296 2zig_A TTHA0409, putative modi 97.7 0.00022 7.5E-09 62.4 10.1 51 118-171 234-284 (297)
297 3vyw_A MNMC2; tRNA wobble urid 97.7 0.00023 7.9E-09 62.4 9.8 136 120-278 97-259 (308)
298 1i4w_A Mitochondrial replicati 97.6 0.00019 6.4E-09 64.4 9.1 59 120-183 59-117 (353)
299 3lkz_A Non-structural protein 97.6 0.00012 4.2E-09 63.3 7.3 145 71-228 44-203 (321)
300 3pvc_A TRNA 5-methylaminomethy 97.6 2.5E-05 8.6E-10 76.2 3.1 108 120-228 59-210 (689)
301 3r24_A NSP16, 2'-O-methyl tran 97.5 0.00022 7.4E-09 61.7 7.2 93 119-235 109-221 (344)
302 3ps9_A TRNA 5-methylaminomethy 97.1 0.0016 5.6E-08 63.2 9.7 108 121-229 68-219 (676)
303 3b5i_A S-adenosyl-L-methionine 97.1 0.0024 8.1E-08 57.7 10.0 37 120-156 53-103 (374)
304 2efj_A 3,7-dimethylxanthine me 97.1 0.00086 2.9E-08 60.7 6.9 78 120-203 53-157 (384)
305 1g60_A Adenine-specific methyl 97.0 0.0015 5.1E-08 55.9 7.2 48 118-168 211-258 (260)
306 2py6_A Methyltransferase FKBM; 96.9 0.0022 7.6E-08 58.6 8.0 60 118-177 225-288 (409)
307 3g7u_A Cytosine-specific methy 96.9 0.0033 1.1E-07 56.8 9.0 101 121-231 3-121 (376)
308 3s2e_A Zinc-containing alcohol 96.9 0.0039 1.3E-07 55.2 9.3 101 116-230 163-264 (340)
309 1f8f_A Benzyl alcohol dehydrog 96.9 0.0028 9.7E-08 56.8 8.4 103 116-230 187-290 (371)
310 1pqw_A Polyketide synthase; ro 96.9 0.0018 6.3E-08 52.5 6.4 101 116-229 35-137 (198)
311 1g55_A DNA cytosine methyltran 96.9 0.0022 7.6E-08 57.2 7.4 76 120-204 2-77 (343)
312 2dph_A Formaldehyde dismutase; 96.7 0.0043 1.5E-07 56.2 8.2 108 114-230 180-300 (398)
313 1pl8_A Human sorbitol dehydrog 96.5 0.012 4.3E-07 52.3 9.9 102 115-229 167-273 (356)
314 1m6e_X S-adenosyl-L-methionnin 96.5 0.00052 1.8E-08 61.6 0.6 108 120-230 52-210 (359)
315 2c7p_A Modification methylase 96.4 0.0092 3.1E-07 52.8 8.2 95 120-231 11-122 (327)
316 4ej6_A Putative zinc-binding d 96.3 0.0076 2.6E-07 54.1 7.2 108 114-230 177-285 (370)
317 1kol_A Formaldehyde dehydrogen 96.3 0.02 6.8E-07 51.7 10.1 107 115-230 181-301 (398)
318 1v3u_A Leukotriene B4 12- hydr 96.3 0.0098 3.3E-07 52.3 7.6 98 116-229 142-244 (333)
319 2uyo_A Hypothetical protein ML 96.3 0.11 3.9E-06 45.4 14.3 110 119-231 102-220 (310)
320 3fpc_A NADP-dependent alcohol 96.2 0.0096 3.3E-07 52.9 7.4 106 114-230 161-267 (352)
321 2c0c_A Zinc binding alcohol de 96.2 0.016 5.4E-07 51.8 8.8 102 114-229 158-261 (362)
322 3jv7_A ADH-A; dehydrogenase, n 96.2 0.016 5.4E-07 51.3 8.7 103 116-230 168-271 (345)
323 4b7c_A Probable oxidoreductase 96.2 0.0095 3.2E-07 52.5 7.1 103 114-229 144-248 (336)
324 1e3j_A NADP(H)-dependent ketos 96.2 0.029 1E-06 49.7 10.1 106 115-229 164-271 (352)
325 4eez_A Alcohol dehydrogenase 1 96.2 0.054 1.9E-06 47.7 11.8 105 115-230 159-264 (348)
326 3uog_A Alcohol dehydrogenase; 96.1 0.0083 2.8E-07 53.6 6.4 101 115-231 185-289 (363)
327 1cdo_A Alcohol dehydrogenase; 96.1 0.024 8.2E-07 50.7 9.5 102 116-230 189-295 (374)
328 2vz8_A Fatty acid synthase; tr 96.1 0.0034 1.2E-07 69.4 4.2 103 119-230 1240-1349(2512)
329 1e3i_A Alcohol dehydrogenase, 96.1 0.025 8.5E-07 50.6 9.2 102 116-230 192-298 (376)
330 3gms_A Putative NADPH:quinone 96.1 0.0084 2.9E-07 53.0 6.0 103 115-230 140-244 (340)
331 3qwb_A Probable quinone oxidor 96.0 0.0098 3.4E-07 52.4 6.4 101 116-229 145-247 (334)
332 1p0f_A NADP-dependent alcohol 96.0 0.02 6.9E-07 51.2 8.5 101 116-229 188-293 (373)
333 3ip1_A Alcohol dehydrogenase, 96.0 0.022 7.4E-07 51.6 8.7 106 117-230 211-319 (404)
334 4eye_A Probable oxidoreductase 96.0 0.016 5.5E-07 51.3 7.5 100 116-229 156-257 (342)
335 3m6i_A L-arabinitol 4-dehydrog 96.0 0.05 1.7E-06 48.4 10.7 106 114-229 174-283 (363)
336 1wly_A CAAR, 2-haloacrylate re 95.9 0.017 6E-07 50.7 7.5 101 116-229 142-244 (333)
337 3jyn_A Quinone oxidoreductase; 95.9 0.012 3.9E-07 51.7 6.3 101 116-229 137-239 (325)
338 1rjd_A PPM1P, carboxy methyl t 95.9 0.12 4.2E-06 45.6 13.0 110 118-230 96-234 (334)
339 1uuf_A YAHK, zinc-type alcohol 95.9 0.077 2.6E-06 47.4 11.8 97 116-229 191-288 (369)
340 2jhf_A Alcohol dehydrogenase E 95.9 0.03 1E-06 50.1 9.0 102 116-230 188-294 (374)
341 4a2c_A Galactitol-1-phosphate 95.9 0.061 2.1E-06 47.3 11.0 108 114-232 155-263 (346)
342 2hcy_A Alcohol dehydrogenase 1 95.8 0.042 1.4E-06 48.5 9.7 102 116-230 166-270 (347)
343 1rjw_A ADH-HT, alcohol dehydro 95.8 0.04 1.4E-06 48.6 9.3 100 116-229 161-261 (339)
344 2fzw_A Alcohol dehydrogenase c 95.8 0.032 1.1E-06 49.9 8.6 102 116-230 187-293 (373)
345 1qor_A Quinone oxidoreductase; 95.8 0.013 4.4E-07 51.4 5.9 101 116-229 137-239 (327)
346 2j3h_A NADP-dependent oxidored 95.7 0.017 5.7E-07 51.0 6.3 98 116-228 152-254 (345)
347 3uko_A Alcohol dehydrogenase c 95.7 0.021 7.1E-07 51.2 7.0 104 116-231 190-297 (378)
348 4dup_A Quinone oxidoreductase; 95.6 0.023 7.7E-07 50.5 7.0 101 116-230 164-266 (353)
349 2eih_A Alcohol dehydrogenase; 95.6 0.017 5.7E-07 51.1 5.9 100 117-229 164-265 (343)
350 2qrv_A DNA (cytosine-5)-methyl 95.5 0.049 1.7E-06 47.4 8.4 103 119-231 15-142 (295)
351 2h6e_A ADH-4, D-arabinose 1-de 95.5 0.022 7.4E-07 50.4 6.3 100 116-229 168-269 (344)
352 1jvb_A NAD(H)-dependent alcoho 95.5 0.046 1.6E-06 48.3 8.4 102 115-229 166-271 (347)
353 1yb5_A Quinone oxidoreductase; 95.5 0.028 9.6E-07 49.9 7.0 101 116-229 167-269 (351)
354 3iht_A S-adenosyl-L-methionine 95.4 0.12 4.2E-06 40.3 9.4 102 121-232 42-150 (174)
355 4h0n_A DNMT2; SAH binding, tra 95.3 0.057 1.9E-06 47.8 8.5 100 121-231 4-121 (333)
356 3two_A Mannitol dehydrogenase; 95.3 0.1 3.6E-06 46.0 10.3 93 116-230 173-266 (348)
357 2zb4_A Prostaglandin reductase 95.3 0.038 1.3E-06 49.0 7.3 102 115-229 154-260 (357)
358 1g60_A Adenine-specific methyl 95.3 0.013 4.3E-07 50.0 4.0 52 173-228 5-73 (260)
359 1boo_A Protein (N-4 cytosine-s 95.3 0.015 5E-07 51.3 4.4 54 171-228 13-83 (323)
360 3ubt_Y Modification methylase 95.3 0.044 1.5E-06 48.1 7.5 95 121-231 1-112 (331)
361 1vj0_A Alcohol dehydrogenase, 95.2 0.043 1.5E-06 49.2 7.4 103 117-230 193-299 (380)
362 2d8a_A PH0655, probable L-thre 95.1 0.037 1.3E-06 48.9 6.5 99 119-229 167-267 (348)
363 2j8z_A Quinone oxidoreductase; 95.0 0.043 1.5E-06 48.7 6.7 101 116-229 159-261 (354)
364 4dvj_A Putative zinc-dependent 95.0 0.043 1.5E-06 48.9 6.7 97 119-228 171-269 (363)
365 2zig_A TTHA0409, putative modi 94.9 0.02 6.7E-07 49.8 4.2 53 172-228 21-96 (297)
366 3gaz_A Alcohol dehydrogenase s 94.9 0.07 2.4E-06 47.1 7.7 97 116-228 147-245 (343)
367 1iz0_A Quinone oxidoreductase; 94.9 0.13 4.3E-06 44.4 9.3 92 117-228 123-217 (302)
368 1eg2_A Modification methylase 94.8 0.028 9.5E-07 49.5 4.9 53 172-228 38-105 (319)
369 2b5w_A Glucose dehydrogenase; 94.7 0.099 3.4E-06 46.3 8.4 93 121-229 174-273 (357)
370 1piw_A Hypothetical zinc-type 94.7 0.097 3.3E-06 46.5 8.3 100 115-229 175-276 (360)
371 3qv2_A 5-cytosine DNA methyltr 94.4 0.099 3.4E-06 46.1 7.5 75 120-204 10-85 (327)
372 3fbg_A Putative arginate lyase 94.1 0.13 4.3E-06 45.4 7.5 95 119-227 150-246 (346)
373 1eg2_A Modification methylase 94.1 0.17 5.8E-06 44.4 8.2 48 118-168 241-291 (319)
374 1boo_A Protein (N-4 cytosine-s 93.9 0.078 2.7E-06 46.6 5.7 59 118-181 251-309 (323)
375 3krt_A Crotonyl COA reductase; 93.8 0.11 3.8E-06 47.7 6.9 101 116-229 225-344 (456)
376 4dcm_A Ribosomal RNA large sub 93.7 0.18 6.1E-06 45.3 7.8 94 120-228 39-135 (375)
377 2dq4_A L-threonine 3-dehydroge 93.5 0.058 2E-06 47.5 4.2 96 116-229 162-262 (343)
378 3gqv_A Enoyl reductase; medium 93.5 0.29 9.9E-06 43.6 8.9 98 118-229 163-263 (371)
379 3fwz_A Inner membrane protein 93.5 0.29 1E-05 37.0 7.7 93 121-227 8-103 (140)
380 4a0s_A Octenoyl-COA reductase/ 93.5 0.19 6.6E-06 45.9 7.8 100 116-229 217-336 (447)
381 1xa0_A Putative NADPH dependen 92.8 0.081 2.8E-06 46.2 4.0 92 122-229 152-246 (328)
382 1gu7_A Enoyl-[acyl-carrier-pro 92.7 0.42 1.4E-05 42.2 8.7 107 116-229 163-275 (364)
383 3nx4_A Putative oxidoreductase 92.7 0.081 2.8E-06 46.1 3.9 91 122-229 149-241 (324)
384 4a27_A Synaptic vesicle membra 92.5 0.16 5.4E-06 44.8 5.6 98 116-229 139-238 (349)
385 1yqd_A Sinapyl alcohol dehydro 92.5 0.36 1.2E-05 42.8 8.0 95 119-229 187-282 (366)
386 2cdc_A Glucose dehydrogenase g 92.5 0.39 1.3E-05 42.6 8.1 94 120-230 181-279 (366)
387 1lss_A TRK system potassium up 92.3 1.2 4.1E-05 32.8 9.7 95 121-226 5-100 (140)
388 2cf5_A Atccad5, CAD, cinnamyl 92.1 0.77 2.6E-05 40.5 9.6 98 116-229 176-275 (357)
389 2vn8_A Reticulon-4-interacting 92.1 0.27 9.1E-06 43.8 6.5 97 117-228 181-279 (375)
390 3goh_A Alcohol dehydrogenase, 91.7 0.24 8.1E-06 42.9 5.7 89 116-228 139-228 (315)
391 1pjc_A Protein (L-alanine dehy 91.6 0.52 1.8E-05 41.9 7.9 97 118-227 165-265 (361)
392 3gg2_A Sugar dehydrogenase, UD 91.5 1.1 3.7E-05 41.2 10.1 103 121-235 3-128 (450)
393 2vhw_A Alanine dehydrogenase; 91.5 0.44 1.5E-05 42.7 7.3 98 118-228 166-267 (377)
394 4fgs_A Probable dehydrogenase 91.5 1.1 3.8E-05 38.2 9.5 144 116-268 25-203 (273)
395 4ezb_A Uncharacterized conserv 91.5 2.8 9.6E-05 36.3 12.3 89 121-227 25-119 (317)
396 3llv_A Exopolyphosphatase-rela 91.0 1.1 3.9E-05 33.4 8.3 92 121-227 7-101 (141)
397 3pid_A UDP-glucose 6-dehydroge 91.0 1.6 5.4E-05 39.9 10.5 105 116-235 32-159 (432)
398 2eez_A Alanine dehydrogenase; 90.9 0.81 2.8E-05 40.7 8.4 99 118-229 164-266 (369)
399 1wma_A Carbonyl reductase [NAD 90.7 1.2 4E-05 37.1 8.9 83 119-204 3-91 (276)
400 3ic5_A Putative saccharopine d 90.7 2 6.8E-05 30.5 9.1 80 120-214 5-88 (118)
401 3c85_A Putative glutathione-re 90.7 1.1 3.8E-05 35.2 8.3 97 120-227 39-137 (183)
402 4fs3_A Enoyl-[acyl-carrier-pro 90.5 2.4 8.3E-05 35.4 10.7 83 118-203 4-94 (256)
403 4eso_A Putative oxidoreductase 90.5 1.7 5.9E-05 36.2 9.7 81 118-204 6-91 (255)
404 3me5_A Cytosine-specific methy 90.5 0.61 2.1E-05 43.3 7.4 58 121-184 89-147 (482)
405 4f3n_A Uncharacterized ACR, CO 90.4 0.43 1.5E-05 43.6 6.1 49 118-166 136-188 (432)
406 3oig_A Enoyl-[acyl-carrier-pro 90.3 3.3 0.00011 34.4 11.4 85 119-204 6-96 (266)
407 3ggo_A Prephenate dehydrogenas 90.3 0.81 2.8E-05 39.8 7.7 89 121-228 34-126 (314)
408 2aef_A Calcium-gated potassium 90.2 2.8 9.7E-05 34.2 10.7 94 120-228 9-104 (234)
409 3tqh_A Quinone oxidoreductase; 90.1 0.85 2.9E-05 39.5 7.7 96 114-228 147-244 (321)
410 3pxx_A Carveol dehydrogenase; 90.0 3.4 0.00012 34.7 11.3 108 118-228 8-152 (287)
411 3pi7_A NADH oxidoreductase; gr 90.0 0.61 2.1E-05 41.0 6.7 97 121-230 166-264 (349)
412 4e21_A 6-phosphogluconate dehy 89.8 2.6 8.9E-05 37.4 10.7 91 120-227 22-113 (358)
413 1id1_A Putative potassium chan 89.6 1.9 6.6E-05 32.7 8.6 96 121-227 4-103 (153)
414 2g1u_A Hypothetical protein TM 89.5 1.2 4.1E-05 34.0 7.4 99 118-227 17-116 (155)
415 1h2b_A Alcohol dehydrogenase; 89.4 1.2 4.1E-05 39.2 8.2 102 115-229 182-285 (359)
416 3ijr_A Oxidoreductase, short c 89.1 3.9 0.00013 34.7 11.0 105 119-228 46-181 (291)
417 2g5c_A Prephenate dehydrogenas 89.1 1.5 5.2E-05 37.0 8.4 88 122-227 3-94 (281)
418 3o38_A Short chain dehydrogena 89.1 2.8 9.6E-05 34.8 10.0 83 118-204 20-110 (266)
419 3ioy_A Short-chain dehydrogena 89.0 3 0.0001 36.0 10.4 83 119-204 7-96 (319)
420 4a7p_A UDP-glucose dehydrogena 88.5 2 6.9E-05 39.3 9.2 104 120-235 8-135 (446)
421 1tt7_A YHFP; alcohol dehydroge 88.4 0.11 3.9E-06 45.3 0.7 93 122-229 153-247 (330)
422 3h2s_A Putative NADH-flavin re 88.3 8.3 0.00028 30.6 13.6 69 122-204 2-71 (224)
423 3ojo_A CAP5O; rossmann fold, c 88.2 2.9 9.9E-05 38.1 10.0 99 121-235 12-135 (431)
424 3swr_A DNA (cytosine-5)-methyl 88.1 2.9 9.9E-05 42.3 10.7 101 120-231 540-671 (1002)
425 3k96_A Glycerol-3-phosphate de 88.1 1.5 5.1E-05 38.9 7.9 96 120-227 29-131 (356)
426 1lnq_A MTHK channels, potassiu 88.0 3.1 0.00011 36.1 9.9 95 120-227 115-209 (336)
427 3l4b_C TRKA K+ channel protien 87.8 1.9 6.4E-05 35.0 7.8 93 122-227 2-97 (218)
428 1l7d_A Nicotinamide nucleotide 87.8 0.81 2.8E-05 41.0 6.0 43 118-162 170-213 (384)
429 3grk_A Enoyl-(acyl-carrier-pro 87.7 8.5 0.00029 32.6 12.3 82 118-204 29-118 (293)
430 3k31_A Enoyl-(acyl-carrier-pro 87.5 6.7 0.00023 33.3 11.6 83 119-204 29-117 (296)
431 3tjr_A Short chain dehydrogena 87.2 3.4 0.00012 35.3 9.5 84 118-204 29-117 (301)
432 3is3_A 17BETA-hydroxysteroid d 86.9 9.6 0.00033 31.7 12.1 110 118-230 16-153 (270)
433 2y0c_A BCEC, UDP-glucose dehyd 86.7 3.9 0.00013 37.7 10.1 104 119-234 7-133 (478)
434 3ksu_A 3-oxoacyl-acyl carrier 86.4 7.4 0.00025 32.3 11.0 83 119-204 10-100 (262)
435 3edm_A Short chain dehydrogena 86.4 4.6 0.00016 33.6 9.7 83 118-203 6-94 (259)
436 3nzo_A UDP-N-acetylglucosamine 86.1 5.5 0.00019 35.5 10.6 83 118-204 33-121 (399)
437 3qha_A Putative oxidoreductase 86.1 1.7 5.9E-05 37.2 7.0 86 121-227 16-103 (296)
438 3r3s_A Oxidoreductase; structu 86.0 5 0.00017 34.1 9.9 107 119-228 48-184 (294)
439 3l9w_A Glutathione-regulated p 86.0 1.7 5.7E-05 39.4 7.1 93 121-227 5-100 (413)
440 3gt0_A Pyrroline-5-carboxylate 86.0 0.49 1.7E-05 39.4 3.3 87 121-226 3-94 (247)
441 1zsy_A Mitochondrial 2-enoyl t 85.9 1 3.6E-05 39.6 5.6 101 116-228 164-269 (357)
442 4fn4_A Short chain dehydrogena 85.8 3.7 0.00013 34.5 8.7 82 118-204 5-93 (254)
443 3ek2_A Enoyl-(acyl-carrier-pro 85.8 7.8 0.00027 32.0 10.8 82 118-204 12-101 (271)
444 3p2y_A Alanine dehydrogenase/p 85.7 0.98 3.4E-05 40.6 5.2 42 119-162 183-225 (381)
445 3v2g_A 3-oxoacyl-[acyl-carrier 85.5 8.1 0.00028 32.3 10.9 108 118-228 29-164 (271)
446 2f1k_A Prephenate dehydrogenas 85.4 4.3 0.00015 34.0 9.1 86 122-226 2-88 (279)
447 3qvo_A NMRA family protein; st 85.0 2.5 8.6E-05 34.5 7.2 93 121-227 24-122 (236)
448 1bg6_A N-(1-D-carboxylethyl)-L 85.0 3 0.0001 36.3 8.1 97 121-228 5-108 (359)
449 1dlj_A UDP-glucose dehydrogena 85.0 6.7 0.00023 35.2 10.6 98 122-234 2-122 (402)
450 3t4x_A Oxidoreductase, short c 84.9 3.9 0.00013 34.1 8.5 83 119-204 9-94 (267)
451 3r6d_A NAD-dependent epimerase 84.8 2.1 7.3E-05 34.4 6.6 86 121-220 6-96 (221)
452 1xg5_A ARPG836; short chain de 84.7 4.1 0.00014 34.1 8.6 86 118-204 30-120 (279)
453 3abi_A Putative uncharacterize 84.6 4.5 0.00015 35.6 9.2 71 120-206 16-88 (365)
454 2vz8_A Fatty acid synthase; tr 84.4 1.2 4.2E-05 49.5 6.3 103 116-227 1664-1768(2512)
455 4g65_A TRK system potassium up 84.4 4.2 0.00014 37.3 9.1 72 120-204 3-77 (461)
456 3ce6_A Adenosylhomocysteinase; 83.9 2.8 9.6E-05 38.9 7.7 88 117-227 271-359 (494)
457 3ucx_A Short chain dehydrogena 83.9 7.4 0.00025 32.3 9.8 81 118-203 9-96 (264)
458 1jw9_B Molybdopterin biosynthe 83.5 5.7 0.00019 33.1 8.8 78 120-204 31-130 (249)
459 4dio_A NAD(P) transhydrogenase 83.5 1.3 4.5E-05 40.1 5.1 42 119-162 189-231 (405)
460 2gdz_A NAD+-dependent 15-hydro 83.0 7.8 0.00027 32.1 9.6 85 119-204 6-95 (267)
461 4g81_D Putative hexonate dehyd 83.0 5.6 0.00019 33.4 8.6 82 118-204 7-95 (255)
462 3b1f_A Putative prephenate deh 83.0 4 0.00014 34.5 7.8 89 120-226 6-98 (290)
463 3gvc_A Oxidoreductase, probabl 82.9 7.1 0.00024 32.8 9.4 81 118-204 27-112 (277)
464 3iup_A Putative NADPH:quinone 82.7 1.1 3.6E-05 40.0 4.2 79 118-205 169-250 (379)
465 1x13_A NAD(P) transhydrogenase 82.7 1.2 4.2E-05 40.1 4.7 42 118-161 170-212 (401)
466 3nyw_A Putative oxidoreductase 82.6 5.7 0.0002 32.8 8.5 85 119-204 6-96 (250)
467 1zkd_A DUF185; NESG, RPR58, st 82.4 3.4 0.00012 37.1 7.4 45 121-165 82-132 (387)
468 3lf2_A Short chain oxidoreduct 82.2 6.2 0.00021 32.8 8.7 85 119-204 7-96 (265)
469 3pef_A 6-phosphogluconate dehy 82.2 1.8 6E-05 36.8 5.2 87 121-227 2-93 (287)
470 3h7a_A Short chain dehydrogena 82.0 7.6 0.00026 32.1 9.1 83 119-204 6-92 (252)
471 3trk_A Nonstructural polyprote 82.0 1.1 3.8E-05 38.0 3.7 39 194-232 210-262 (324)
472 3ew7_A LMO0794 protein; Q8Y8U8 81.9 17 0.00058 28.6 12.2 68 122-204 2-70 (221)
473 3vtf_A UDP-glucose 6-dehydroge 81.7 2 6.7E-05 39.4 5.6 103 121-235 22-150 (444)
474 3u5t_A 3-oxoacyl-[acyl-carrier 81.6 7.7 0.00026 32.4 9.1 83 119-204 26-114 (267)
475 2qyt_A 2-dehydropantoate 2-red 81.6 1.5 5.1E-05 37.6 4.6 34 194-227 82-115 (317)
476 2gn4_A FLAA1 protein, UDP-GLCN 81.6 3.5 0.00012 35.9 7.1 77 118-204 19-100 (344)
477 3lyl_A 3-oxoacyl-(acyl-carrier 81.5 8.3 0.00028 31.4 9.1 81 119-204 4-91 (247)
478 3ruf_A WBGU; rossmann fold, UD 81.4 4.6 0.00016 34.8 7.8 80 119-204 24-109 (351)
479 3h8v_A Ubiquitin-like modifier 81.2 6.8 0.00023 33.7 8.6 84 119-204 35-146 (292)
480 3svt_A Short-chain type dehydr 81.1 6.3 0.00021 33.1 8.4 85 119-204 10-100 (281)
481 4e12_A Diketoreductase; oxidor 80.9 9.7 0.00033 32.1 9.5 94 121-226 5-118 (283)
482 3tri_A Pyrroline-5-carboxylate 80.8 2 7E-05 36.5 5.2 87 121-226 4-95 (280)
483 1iy8_A Levodione reductase; ox 80.8 7.4 0.00025 32.3 8.7 85 119-204 12-101 (267)
484 3t8y_A CHEB, chemotaxis respon 80.7 7.8 0.00027 29.3 8.2 96 128-229 9-106 (164)
485 3oj0_A Glutr, glutamyl-tRNA re 80.3 15 0.00052 27.2 9.6 87 118-226 19-107 (144)
486 3qiv_A Short-chain dehydrogena 80.1 7.5 0.00026 31.8 8.4 83 119-204 8-95 (253)
487 3sju_A Keto reductase; short-c 80.1 6.4 0.00022 33.1 8.1 81 119-204 23-110 (279)
488 2pd4_A Enoyl-[acyl-carrier-pro 80.1 21 0.00073 29.5 11.4 83 119-204 5-93 (275)
489 3sc4_A Short chain dehydrogena 80.1 15 0.00052 30.8 10.5 81 119-204 8-102 (285)
490 1x0v_A GPD-C, GPDH-C, glycerol 80.1 3.4 0.00012 36.0 6.5 94 121-226 9-121 (354)
491 3c7a_A Octopine dehydrogenase; 79.9 19 0.00066 31.9 11.6 96 122-227 4-114 (404)
492 3o26_A Salutaridine reductase; 79.9 5.4 0.00018 33.6 7.6 84 119-204 11-100 (311)
493 1ja9_A 4HNR, 1,3,6,8-tetrahydr 79.5 8.6 0.0003 31.7 8.7 83 119-204 20-108 (274)
494 2yut_A Putative short-chain ox 79.4 7.8 0.00027 30.4 8.0 72 122-204 2-75 (207)
495 3hn2_A 2-dehydropantoate 2-red 79.2 2.2 7.4E-05 36.8 4.8 92 121-227 3-101 (312)
496 4da9_A Short-chain dehydrogena 79.0 7.2 0.00024 32.8 8.0 82 118-204 27-116 (280)
497 4ina_A Saccharopine dehydrogen 78.7 11 0.00038 33.7 9.6 89 121-215 2-96 (405)
498 3f1l_A Uncharacterized oxidore 78.7 9.6 0.00033 31.3 8.6 83 118-204 10-101 (252)
499 3iei_A Leucine carboxyl methyl 78.7 33 0.0011 29.9 13.3 111 119-230 90-231 (334)
500 3d4o_A Dipicolinate synthase s 78.6 13 0.00045 31.5 9.7 88 118-226 153-241 (293)
No 1
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.6e-37 Score=268.17 Aligned_cols=216 Identities=39% Similarity=0.706 Sum_probs=197.3
Q ss_pred ccCCCChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCC
Q 023645 64 QVISVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLP 142 (279)
Q Consensus 64 ~~~~~~~~l~~Y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~ 142 (279)
..+.+++.+.+|+.++. ++++.+.++++.+...+.+.+.+++..++++..++...++++|||||||+|++++++++.++
T Consensus 4 ~~~~~~~~~~~Y~~~~~~~~~~~l~~~~~~~~~~~~~~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~ 83 (242)
T 3r3h_A 4 KHLSLTPELYKYLLDISLREHPALAALRKETSTMELANMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALP 83 (242)
T ss_dssp CCCCCCHHHHHHHHHHHCCCCHHHHHHHHTTSSSGGGGTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSC
T ss_pred CcccCCHHHHHHHHHhcCCCCHHHHHHHHHHHhCCCCCCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCC
Confidence 44667899999999974 67889999999887777778899999999999999999999999999999999999999987
Q ss_pred CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCC
Q 023645 143 ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVG 222 (279)
Q Consensus 143 ~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~g 222 (279)
++++|+++|+++++++.|+++++..|+.++++++++|+.+.++.+..+++.++||+||+|++...+..+++.+.++|+||
T Consensus 84 ~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpG 163 (242)
T 3r3h_A 84 DDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQFDFIFIDADKTNYLNYYELALKLVTPK 163 (242)
T ss_dssp TTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCEEEEEEESCGGGHHHHHHHHHHHEEEE
T ss_pred CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCEeEEEEcCChHHhHHHHHHHHHhcCCC
Confidence 68999999999999999999999999988899999999988776533222378999999999999999999999999999
Q ss_pred cEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 223 GIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 223 G~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
|+|+++|++|+|.+.++...+..+.++++|++.+.++++++++++|++||+++|+||
T Consensus 164 G~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 220 (242)
T 3r3h_A 164 GLIAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVSLLAIADGMFLVQPI 220 (242)
T ss_dssp EEEEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEEEESSSSCEEEEEEC
T ss_pred eEEEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEEEEEccCceEEEEEc
Confidence 999999999999999988888889999999999999999999999999999999985
No 2
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=100.00 E-value=3.2e-36 Score=256.59 Aligned_cols=204 Identities=22% Similarity=0.323 Sum_probs=187.0
Q ss_pred ChhHHHHHHhccCChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCC---EEEEEcCccCHHHHHHHHHCCCCC
Q 023645 69 TPPLYDYILRNVREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQ---RCIEVGVYTGYSSLAIALVLPESG 145 (279)
Q Consensus 69 ~~~l~~Y~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~---~VLEiG~G~G~~t~~la~~~~~~~ 145 (279)
.+.+.+|+.+..++++.+.++++.+.... .+.+.+..++++..++...+++ +|||||||+|++++++++.+++++
T Consensus 5 ~~~~~~y~~~~~~~~~~l~~~~~~a~~~~--~p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~ 82 (221)
T 3dr5_A 5 FEYLRTYVESTTETDAAVARAREDAAEFG--LPAPDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNT 82 (221)
T ss_dssp HHHHHHHHHTTSCCCHHHHHHHHHHHHTT--CCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTS
T ss_pred HHHHHHHHHHcCCCCHHHHHHHHHHHHcC--CCCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCC
Confidence 35678999998888999999999987764 4457999999999999988888 999999999999999999987789
Q ss_pred EEEEEeCChhHHHHHHHHHHHhCCC-CcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcE
Q 023645 146 CLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGI 224 (279)
Q Consensus 146 ~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~ 224 (279)
+|+++|+++++++.|+++++..|+. ++++++++|+.+.++.+. +++||+||+|+....+..+++.+.++|+|||+
T Consensus 83 ~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~----~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~ 158 (221)
T 3dr5_A 83 TLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLA----NDSYQLVFGQVSPMDLKALVDAAWPLLRRGGA 158 (221)
T ss_dssp EEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSC----TTCEEEEEECCCTTTHHHHHHHHHHHEEEEEE
T ss_pred EEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhc----CCCcCeEEEcCcHHHHHHHHHHHHHHcCCCcE
Confidence 9999999999999999999999998 789999999988765431 47899999999999999999999999999999
Q ss_pred EEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEE
Q 023645 225 IVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQK 278 (279)
Q Consensus 225 lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~ 278 (279)
|+++|++|.|.+.++...+..+.++++|++++.++++++++++|+|||+++++|
T Consensus 159 lv~dn~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~gdGl~~~~~ 212 (221)
T 3dr5_A 159 LVLADALLDGTIADQTRKDRDTQAARDADEYIRSIEGAHVARLPLGAGLTVVTK 212 (221)
T ss_dssp EEETTTTGGGTCSCSSCCCHHHHHHHHHHHHHTTCTTEEEEEESSTTCEEEEEE
T ss_pred EEEeCCCCCCcCCCCCCCChHHHHHHHHHHHHhhCCCeeEEEeeccchHHHHHH
Confidence 999999999999998888888889999999999999999999999999999997
No 3
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=100.00 E-value=7.1e-35 Score=250.70 Aligned_cols=216 Identities=37% Similarity=0.640 Sum_probs=192.0
Q ss_pred ccCCCChhHHHHHHhcc---CChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHH
Q 023645 64 QVISVTPPLYDYILRNV---REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALV 140 (279)
Q Consensus 64 ~~~~~~~~l~~Y~~~~~---~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~ 140 (279)
+....++.+++|+.++. ++++.+.++++.+.....+.+.+++.+++++..++...++++|||||||+|+++.++++.
T Consensus 12 ~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~ 91 (237)
T 3c3y_A 12 TGLLQSEELCQYILRTSVYPREAGFLKELREANESHPDSYMSTSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALS 91 (237)
T ss_dssp -CCBSCHHHHHHHHHHHTGGGSCHHHHHHHHHHTTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHH
T ss_pred cccCchHHHHHHHHHcccCCCCCHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHh
Confidence 45667899999999862 678999999999988777788999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCC-CCCcEEEEEEeCCccchHHHHHHHHccC
Q 023645 141 LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG-EASSYDFAFVDAEKRMYQEYFELLLQLI 219 (279)
Q Consensus 141 ~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~-~~~~fDlI~id~~~~~~~~~l~~~~~~L 219 (279)
++++++|+++|+++++++.|+++++..|+.++++++++|+.+.++.+..++ ..++||+||+|+++..+..+++.+.++|
T Consensus 92 ~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~I~~d~~~~~~~~~l~~~~~~L 171 (237)
T 3c3y_A 92 IPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGSYDFGFVDADKPNYIKYHERLMKLV 171 (237)
T ss_dssp SCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTCEEEEEECSCGGGHHHHHHHHHHHE
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCCcCEEEECCchHHHHHHHHHHHHhc
Confidence 887799999999999999999999999998889999999998877664432 1468999999999999999999999999
Q ss_pred CCCcEEEEeCCCCCCcccCcccCC-----hhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 220 RVGGIIVIDNVLWHGKVADQMVND-----AKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 220 k~gG~lv~dd~~~~g~~~~~~~~~-----~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
+|||+|+++|++|.|.+.++...+ .....+++|++.+.++++++++++|++||+++++|+
T Consensus 172 ~pGG~lv~d~~~~~g~~~~~~~~~~~~~r~~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 236 (237)
T 3c3y_A 172 KVGGIVAYDNTLWGGTVAQPESEVPDFMKENREAVIELNKLLAADPRIEIVHLPLGDGITFCRRL 236 (237)
T ss_dssp EEEEEEEEECTTGGGGGGSCGGGSCGGGHHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred CCCeEEEEecCCcCCccCCCcccchhhHHHHHHHHHHHHHHHhcCCCeEEEEEEeCCceEEEEEc
Confidence 999999999999999988763222 135578999999999999999999999999999986
No 4
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=100.00 E-value=4.8e-35 Score=253.35 Aligned_cols=216 Identities=39% Similarity=0.665 Sum_probs=192.2
Q ss_pred ccCCCChhHHHHHHhc---cCChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHH
Q 023645 64 QVISVTPPLYDYILRN---VREPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALV 140 (279)
Q Consensus 64 ~~~~~~~~l~~Y~~~~---~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~ 140 (279)
+....++++++|+.++ .++++.+.++++++...+.+.|.+++.++.++..++...++++|||||||+|++++++++.
T Consensus 21 ~~~~~~~~~~~y~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~ 100 (247)
T 1sui_A 21 KSLLQSDALYQYILETSVFPREHEAMKELREVTAKHPWNIMTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALA 100 (247)
T ss_dssp CCSBSCHHHHHHHHHHHTSSSCTTHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHH
T ss_pred ccCCchHHHHHHHHHcccCCCCCHHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHh
Confidence 4566889999999986 2678899999999988777788999999999999999999999999999999999999999
Q ss_pred CCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCC-CCCcEEEEEEeCCccchHHHHHHHHccC
Q 023645 141 LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG-EASSYDFAFVDAEKRMYQEYFELLLQLI 219 (279)
Q Consensus 141 ~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~-~~~~fDlI~id~~~~~~~~~l~~~~~~L 219 (279)
++++++|+++|+++++++.|+++++..|+.++++++++|+.+.++.+...+ ..++||+||+|+....+..+++.+.++|
T Consensus 101 ~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~fD~V~~d~~~~~~~~~l~~~~~~L 180 (247)
T 1sui_A 101 IPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGSYDFIFVDADKDNYLNYHKRLIDLV 180 (247)
T ss_dssp SCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTCBSEEEECSCSTTHHHHHHHHHHHB
T ss_pred CCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCCEEEEEEcCchHHHHHHHHHHHHhC
Confidence 886789999999999999999999999998889999999998877653221 1368999999999889999999999999
Q ss_pred CCCcEEEEeCCCCCCcccCcccCCh------hhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 220 RVGGIIVIDNVLWHGKVADQMVNDA------KTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 220 k~gG~lv~dd~~~~g~~~~~~~~~~------~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
+|||+|++||++|.|.+.++...+. ...++++|++.+.++++++++++|++||+++++|+
T Consensus 181 kpGG~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~lp~~dG~~l~~k~ 246 (247)
T 1sui_A 181 KVGGVIGYDNTLWNGSVVAPPDAPLRKYVRYYRDFVLELNKALAVDPRIEICMLPVGDGITICRRI 246 (247)
T ss_dssp CTTCCEEEECTTGGGGGGCCTTSCCCHHHHHHHHHHHHHHHHHHTCTTBCCEEECSTTCEEEECBC
T ss_pred CCCeEEEEecCCcCCcccCCCccchhhhhhHHHHHHHHHHHHHhhCCCeEEEEEecCCccEEEEEc
Confidence 9999999999999999987754332 24589999999999999999999999999999985
No 5
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=100.00 E-value=2.1e-34 Score=246.84 Aligned_cols=222 Identities=43% Similarity=0.796 Sum_probs=196.5
Q ss_pred ccccccccCCCChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHH
Q 023645 58 EKYSNKQVISVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLA 136 (279)
Q Consensus 58 ~~~~~~~~~~~~~~l~~Y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~ 136 (279)
-.++.+....+++.+.+|+.+.. ++++.+.++++.+.....+.|.+.+.++.++..++...++++|||||||+|+++.+
T Consensus 10 ~~~~~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~ 89 (232)
T 3cbg_A 10 HGSMGKGITGFDPSLYSYLQSISADDSFYLAQLRRETAHLPGAPMQISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALA 89 (232)
T ss_dssp -----CCBTTSCHHHHHHHHHTSCCCCHHHHHHHHHTTTSTTGGGSCCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHH
T ss_pred ccccccccccchHHHHHHHHHhCCCCCHHHHHHHHHHHHcCCCccCcCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHH
Confidence 34566777889999999999975 57889999999987776667789999999999999988999999999999999999
Q ss_pred HHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHH
Q 023645 137 IALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLL 216 (279)
Q Consensus 137 la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~ 216 (279)
+++.++++++|+++|+++++++.|+++++..++.++++++.+|+.+.++.+......++||+||+|+....+..+++.+.
T Consensus 90 la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD~V~~d~~~~~~~~~l~~~~ 169 (232)
T 3cbg_A 90 MALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFDLIFIDADKRNYPRYYEIGL 169 (232)
T ss_dssp HHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEEEEEECSCGGGHHHHHHHHH
T ss_pred HHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcCEEEECCCHHHHHHHHHHHH
Confidence 99988767899999999999999999999999988899999999887766542211178999999999889999999999
Q ss_pred ccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 217 QLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 217 ~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
++|+|||+|+++|+.|.|.+.++...+..+..+++|++.+.++++++++++|++||+++++|+
T Consensus 170 ~~LkpgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~~~ 232 (232)
T 3cbg_A 170 NLLRRGGLMVIDNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRISVIPLGDGMTLALKK 232 (232)
T ss_dssp HTEEEEEEEEEECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEEEEECSBTCEEEEEEC
T ss_pred HHcCCCeEEEEeCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEEEEEEcCCeEEEEEeC
Confidence 999999999999999999999887778888899999999999999999999999999999986
No 6
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=100.00 E-value=4.7e-34 Score=242.58 Aligned_cols=218 Identities=43% Similarity=0.774 Sum_probs=196.5
Q ss_pred ccccCCCChhHHHHHHhcc-CChHHHHHHHHHHH-ccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHH
Q 023645 62 NKQVISVTPPLYDYILRNV-REPEILRQLREETA-GMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIAL 139 (279)
Q Consensus 62 ~~~~~~~~~~l~~Y~~~~~-~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~ 139 (279)
......+++.+.+|+.++. ++++.+.++++.+. ..+.+.+.+++..+.++..++...++.+|||||||+|.++..+++
T Consensus 5 ~~~~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~ 84 (225)
T 3tr6_A 5 SINTTLLTPELYQYLLQVSLREPPLLAELREETTRSFSTYAMQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGL 84 (225)
T ss_dssp CCCSCCCCHHHHHHHHHTTCCCCHHHHHHHHHHHHHCTTGGGSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHT
T ss_pred ccCCCCCCHHHHHHHHHhcCCCCHHHHHHHHHHHhhCCCCccccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHH
Confidence 3355668899999999975 46788999998887 777777899999999999999999999999999999999999999
Q ss_pred HCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccC
Q 023645 140 VLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLI 219 (279)
Q Consensus 140 ~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~L 219 (279)
.++++++|+++|+++++++.|+++++..++.++++++++|+.+.++.+...+..++||+||++++...+..+++.+.++|
T Consensus 85 ~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~v~~~~~~~~~~~~l~~~~~~L 164 (225)
T 3tr6_A 85 ALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQYDLIYIDADKANTDLYYEESLKLL 164 (225)
T ss_dssp TCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCEEEEEECSCGGGHHHHHHHHHHHE
T ss_pred hCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCccEEEECCCHHHHHHHHHHHHHhc
Confidence 88767899999999999999999999999988899999999888776532222278999999999888999999999999
Q ss_pred CCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 220 RVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 220 k~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
+|||+|+++|++|.|.+.++...+....++++|++.+.++++++++++|++||+.+++|+
T Consensus 165 ~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~~~~k~ 224 (225)
T 3tr6_A 165 REGGLIAVDNVLRRGQVADEENQSENNQLIRLFNQKVYKDERVDMILIPIGDGLTLARKK 224 (225)
T ss_dssp EEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred CCCcEEEEeCCCcCCcccCccccChHHHHHHHHHHHHhcCCCeEEEEEEcCCccEEEEEC
Confidence 999999999999999999888778888899999999999999999999999999999996
No 7
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=100.00 E-value=1.2e-32 Score=234.61 Aligned_cols=212 Identities=38% Similarity=0.646 Sum_probs=191.7
Q ss_pred CChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCE
Q 023645 68 VTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGC 146 (279)
Q Consensus 68 ~~~~l~~Y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~ 146 (279)
..+.+.+|+.++. ++++.+.++++.+.....+.+.+++..+.++..++...++++|||||||+|.++..+++.++.+++
T Consensus 17 ~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~ 96 (229)
T 2avd_A 17 EDSRLWQYLLSRSMREHPALRSLRLLTLEQPQGDSMMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGR 96 (229)
T ss_dssp TTSHHHHHHHHTTCCCCHHHHHHHHHHHTSTTGGGSCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCE
T ss_pred hHHHHHHHHHHcCCCCCHHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCE
Confidence 5678899999874 678899999999988767778999999999999999999999999999999999999998876789
Q ss_pred EEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEE
Q 023645 147 LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 147 v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
|+++|+++++++.|+++++..++.++++++++|+.+.++.+...++.++||+||+|.....+..+++.+.++|+|||+++
T Consensus 97 v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv 176 (229)
T 2avd_A 97 VVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILA 176 (229)
T ss_dssp EEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 99999999999999999999998888999999998877665432112689999999998889999999999999999999
Q ss_pred EeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 227 IDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 227 ~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
++|++|+|.+.++...+....++++|++.+.++++++++++|++||+++++|+
T Consensus 177 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dGl~~~~k~ 229 (229)
T 2avd_A 177 VLRVLWRGKVLQPPKGDVAAECVRNLNERIRRDVRVYISLLPLGDGLTLAFKI 229 (229)
T ss_dssp EECCSGGGGGGSCCTTCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred EECCCcCCcccCcccCChHHHHHHHHHHHHhhCCCEEEEEEecCCceEEEEEC
Confidence 99999999998887777888899999999999999999999999999999985
No 8
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=100.00 E-value=1.2e-32 Score=233.64 Aligned_cols=209 Identities=31% Similarity=0.506 Sum_probs=190.4
Q ss_pred hhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEE
Q 023645 70 PPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLV 148 (279)
Q Consensus 70 ~~l~~Y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~ 148 (279)
+.+.+|+.++. ++++.+.++++.+.....+.+.+++..++++..++...++.+|||||||+|.++.++++.++++++|+
T Consensus 8 ~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~ 87 (223)
T 3duw_A 8 TAVDQYVSDVLIPKDSTLEEVLQVNAAANLPAHDVSPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVV 87 (223)
T ss_dssp HHHHHHHHHHHSCCCHHHHHHHHHHHHTTCCSCSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEE
T ss_pred HHHHHHHHHhCCCCCHHHHHHHHHHhhCCCCCcccCHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEE
Confidence 45779999875 56889999999998887888889999999999999999999999999999999999999987678999
Q ss_pred EEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 149 ACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 149 ~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
++|+++++++.|+++++..++.++++++++|+.+.++.+...+ .++||+||+|+....+..+++.+.++|+|||+++++
T Consensus 88 ~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~-~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~ 166 (223)
T 3duw_A 88 TLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEK-YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGD 166 (223)
T ss_dssp EEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTT-CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEE
T ss_pred EEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcC-CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEe
Confidence 9999999999999999999998889999999988777654321 267999999999999999999999999999999999
Q ss_pred CCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeec-----CCceEEEEEC
Q 023645 229 NVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPI-----GDGMTICQKR 279 (279)
Q Consensus 229 d~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~-----~~G~~i~~~~ 279 (279)
|+.|+|.+.++...+.....+++|++.+.++++++++++|+ +||+.+|++|
T Consensus 167 ~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~~~~~dG~~~~~~~ 222 (223)
T 3duw_A 167 NVVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSATALQTVGSKGYDGFIMAVVK 222 (223)
T ss_dssp SCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEEEETTEEEEEEEEEEC
T ss_pred CCCcCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEeccCCCCCCeeEEEEEe
Confidence 99999999988877888889999999999999999999999 9999999985
No 9
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=5.8e-32 Score=233.98 Aligned_cols=208 Identities=29% Similarity=0.499 Sum_probs=186.9
Q ss_pred ChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEE
Q 023645 69 TPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCL 147 (279)
Q Consensus 69 ~~~l~~Y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v 147 (279)
.+.+.+|+.+.. .+++.+.++++.+.....+.+.+++..+.++..++...++++|||||||+|+++..+++.++++++|
T Consensus 12 ~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~p~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v 91 (248)
T 3tfw_A 12 WSAVDNYLIKALIPGDPVLDRVLENNHRAGLPAHDVAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQL 91 (248)
T ss_dssp HHHHHHHHHHHHSCCCHHHHHHHHHHHHTTCBSCCCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEE
T ss_pred hHHHHHHHHhcCCCCCHHHHHHHHHHHHcCCCccccCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEE
Confidence 345778998864 5678899999888877777778899999999999999999999999999999999999998767899
Q ss_pred EEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 148 VACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 148 ~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+++|+++++++.|+++++..++.++++++++|+.+.++.+. +.++||+||+|+....+..+++.+.++|||||+|++
T Consensus 92 ~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~---~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~ 168 (248)
T 3tfw_A 92 LTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLG---ECPAFDLIFIDADKPNNPHYLRWALRYSRPGTLIIG 168 (248)
T ss_dssp EEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCC---SCCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcC---CCCCeEEEEECCchHHHHHHHHHHHHhcCCCeEEEE
Confidence 99999999999999999999998889999999988766541 134899999999999999999999999999999999
Q ss_pred eCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEe-ecC----CceEEEEEC
Q 023645 228 DNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMV-PIG----DGMTICQKR 279 (279)
Q Consensus 228 dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l-p~~----~G~~i~~~~ 279 (279)
+|++|.|.+.++...+..+.++++|++.+.++++++++++ |++ ||+.+|++|
T Consensus 169 ~~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~~~g~~~~DG~~i~~~~ 225 (248)
T 3tfw_A 169 DNVVRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTATALQTVGTKGWDGFTLAWVN 225 (248)
T ss_dssp ECCSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEEEECSTTCSEEEEEEEEC
T ss_pred eCCCcCCcccCccccchHHHHHHHHHHHHhhCCCEEEEEeecCCCCCCCeeEEEEEe
Confidence 9999999999888778888899999999999999999988 676 999999986
No 10
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=100.00 E-value=3.3e-32 Score=233.15 Aligned_cols=207 Identities=23% Similarity=0.367 Sum_probs=180.0
Q ss_pred cCCCChhHHHHHHhccC-ChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCC
Q 023645 65 VISVTPPLYDYILRNVR-EPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE 143 (279)
Q Consensus 65 ~~~~~~~l~~Y~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~ 143 (279)
...+++.+.+|+.+... +++.+.++++.+.... .+.+.+..+.++..++...++.+|||||||+|+++.++++..+
T Consensus 18 ~~~~~~~l~~yl~~~~~~~~~~l~~l~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~~- 94 (232)
T 3ntv_A 18 GSHMDDLNKKYLIDLHQHQNSSIEVLREFAEVNE--VPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASISD- 94 (232)
T ss_dssp ---CHHHHHHHHHHHHGGGCCGGGGHHHHHHHTT--CCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTCT-
T ss_pred CCCCCHHHHHHHHHhCCCCCHHHHHHHHHHHHcC--CCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhCC-
Confidence 34578899999998753 4567777777776553 3456899999999999999999999999999999999999665
Q ss_pred CCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHH-HHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCC
Q 023645 144 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK-ALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVG 222 (279)
Q Consensus 144 ~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~-~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~g 222 (279)
+++|+++|+++++++.|+++++..++.++++++++|+.+.++ .+ +++||+||++.....+..+++.+.++|+||
T Consensus 95 ~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~-----~~~fD~V~~~~~~~~~~~~l~~~~~~Lkpg 169 (232)
T 3ntv_A 95 DIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVN-----DKVYDMIFIDAAKAQSKKFFEIYTPLLKHQ 169 (232)
T ss_dssp TCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHT-----TSCEEEEEEETTSSSHHHHHHHHGGGEEEE
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhc-----cCCccEEEEcCcHHHHHHHHHHHHHhcCCC
Confidence 789999999999999999999999998789999999998777 55 579999999999999999999999999999
Q ss_pred cEEEEeCCCCCCcccCccc-CC----hhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 223 GIIVIDNVLWHGKVADQMV-ND----AKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 223 G~lv~dd~~~~g~~~~~~~-~~----~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
|+|+++|++|.|.+.++.. .+ ....++++|++.+.++++++++++|++||+.+++||
T Consensus 170 G~lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~dG~~i~~k~ 231 (232)
T 3ntv_A 170 GLVITDNVLYHGFVSDIGIVRSRNVRQMVKKVQDYNEWLIKQPGYTTNFLNIDDGLAISIKG 231 (232)
T ss_dssp EEEEEECTTGGGGGGCGGGGGCHHHHHHHHHHHHHHHHHHTCTTEEEEEECSTTCEEEEEEC
T ss_pred eEEEEeeCCcCccccCcccccchhhhHHHHHHHHHHHHHhcCCCeEEEEEEcCCceEEEEEC
Confidence 9999999999999887654 22 234589999999999999999999999999999996
No 11
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=100.00 E-value=6.2e-31 Score=225.89 Aligned_cols=215 Identities=42% Similarity=0.753 Sum_probs=190.0
Q ss_pred cCCCChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCC
Q 023645 65 VISVTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE 143 (279)
Q Consensus 65 ~~~~~~~l~~Y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~ 143 (279)
....++.+.+|+.... ++++.+.++++.+.....+.+.+.+..+.++..++...++.+|||||||+|+++..+++.+++
T Consensus 5 ~~~~~~~~~~y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~ 84 (239)
T 2hnk_A 5 NISLTESLEEYIFRNSVREPDSFLKLRKETGTLAQANMQISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPE 84 (239)
T ss_dssp SCCCCHHHHHHHHHTTCCCCHHHHHHHHHHHTC---CCSCCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCT
T ss_pred cccchHHHHHHHHHccCCCCHHHHHHHHHHHHcCCcccccCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCC
Confidence 4567788999999974 678899999999988877778999999999999999889999999999999999999999876
Q ss_pred CCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhC---------CCC--CcEEEEEEeCCccchHHHH
Q 023645 144 SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN---------GEA--SSYDFAFVDAEKRMYQEYF 212 (279)
Q Consensus 144 ~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~---------~~~--~~fDlI~id~~~~~~~~~l 212 (279)
+++|+++|+++.+++.|+++++..++.++++++.+|+.+.++.+... .+. ++||+||++.....+..++
T Consensus 85 ~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l 164 (239)
T 2hnk_A 85 DGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADKENYPNYY 164 (239)
T ss_dssp TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCGGGHHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccccccCCCCCcCEEEEeCCHHHHHHHH
Confidence 78999999999999999999999998878999999998866654221 111 6899999999888899999
Q ss_pred HHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 213 ELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 213 ~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
+.+.++|+|||++++++++|.|.+.++......+..+++|++.+..+++++++++|+++|+.+++|+
T Consensus 165 ~~~~~~L~pgG~lv~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~g~~~~~~~ 231 (239)
T 2hnk_A 165 PLILKLLKPGGLLIADNVLWDGSVADLSHQEPSTVGIRKFNELVYNDSLVDVSLVPIADGVSLVRKR 231 (239)
T ss_dssp HHHHHHEEEEEEEEEECSSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEEEECSTTCEEEEEEC
T ss_pred HHHHHHcCCCeEEEEEccccCCcccCccccchHHHHHHHHHHHHhhCCCeEEEEEEcCCceEeeeeh
Confidence 9999999999999999999999988877777778899999999999999999999999999999985
No 12
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.97 E-value=1.4e-30 Score=219.33 Aligned_cols=203 Identities=19% Similarity=0.278 Sum_probs=172.1
Q ss_pred CChhHHHHHHhcc-CChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCE
Q 023645 68 VTPPLYDYILRNV-REPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGC 146 (279)
Q Consensus 68 ~~~~l~~Y~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~ 146 (279)
..+.+++|+.++. ++++.+.++++.+.... .+.+.+..+.++..++...++++|||||||+|+++.++++.++++++
T Consensus 6 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--~p~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~ 83 (210)
T 3c3p_A 6 VDSRIGAYLDGLLPEADPVVAAMEQIARERN--IPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSR 83 (210)
T ss_dssp BCHHHHHHHHHTSCSCCHHHHHHHHHHHHTT--CCCCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCE
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHcC--CCCcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCE
Confidence 5677899999876 45788999998887653 45689999999999988888999999999999999999998876789
Q ss_pred EEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEE
Q 023645 147 LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 147 v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
|+++|+++++++.|+++++..++.++++++++|+.+.++.. .+ ||+||++.....+..+++.+.++|+|||+++
T Consensus 84 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~-fD~v~~~~~~~~~~~~l~~~~~~LkpgG~lv 157 (210)
T 3c3p_A 84 VVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQ-----RD-IDILFMDCDVFNGADVLERMNRCLAKNALLI 157 (210)
T ss_dssp EEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTC-----CS-EEEEEEETTTSCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccC-----CC-CCEEEEcCChhhhHHHHHHHHHhcCCCeEEE
Confidence 99999999999999999999998888999999998765543 45 9999999988889999999999999999999
Q ss_pred EeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 227 IDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 227 ~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
++|+.|.|.+.++ ........+++|++.+.+++++.++++|+++|+.+++|+
T Consensus 158 ~~~~~~~g~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~~G~~~~~~~ 209 (210)
T 3c3p_A 158 AVNALRRGSVAES-HEDPETAALREFNHHLSRRRDFFTTIVPVGNGVLLGYRL 209 (210)
T ss_dssp EESSSSCC-------------CCCHHHHHHTTCTTEEEEEECSTTCEEEEEEC
T ss_pred EECccccCcccCc-ccchHHHHHHHHHHHHhhCCCeEEEEEecCCceEEEEeC
Confidence 9999999988755 444555678999999999999999999999999999986
No 13
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.96 E-value=8.4e-28 Score=203.97 Aligned_cols=195 Identities=21% Similarity=0.373 Sum_probs=164.7
Q ss_pred ChhHHHHHHhccC--Ch-HHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCC
Q 023645 69 TPPLYDYILRNVR--EP-EILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESG 145 (279)
Q Consensus 69 ~~~l~~Y~~~~~~--~~-~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~ 145 (279)
..++++|+.++.. ++ .+++.+.+...... ..+.+++..++++..++...++++|||||||+|.++.++++.+++++
T Consensus 6 ~~~~~~y~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~ 84 (221)
T 3u81_A 6 EQRILRYVQQNAKPGDPQSVLEAIDTYCTQKE-WAMNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGA 84 (221)
T ss_dssp HHHHHHHHHHHSCTTCHHHHHHHHHHHHHHHT-CGGGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTC
T ss_pred HHHHHHHHHhcCCCCCHHHHHHHHHHHhhhcC-cCcccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCC
Confidence 4578899998753 23 46777777776543 34789999999999999999999999999999999999999887678
Q ss_pred EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHH---HHHHHHccCCCC
Q 023645 146 CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQE---YFELLLQLIRVG 222 (279)
Q Consensus 146 ~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~---~l~~~~~~Lk~g 222 (279)
+|+++|+++++++.|+++++..++.++++++++|+.+.++.+....+.++||+||+|+....+.. +++.+ ++|+||
T Consensus 85 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~fD~V~~d~~~~~~~~~~~~~~~~-~~Lkpg 163 (221)
T 3u81_A 85 RLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLDMVFLDHWKDRYLPDTLLLEKC-GLLRKG 163 (221)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCCSEEEECSCGGGHHHHHHHHHHT-TCCCTT
T ss_pred EEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCceEEEEEcCCcccchHHHHHHHhc-cccCCC
Confidence 99999999999999999999999988899999999877665421111268999999998777665 44444 999999
Q ss_pred cEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEee-------cCCceEEEEEC
Q 023645 223 GIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVP-------IGDGMTICQKR 279 (279)
Q Consensus 223 G~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp-------~~~G~~i~~~~ 279 (279)
|+|+++|+.|+|. ++|++++.++++++++.+| ++||+.+++++
T Consensus 164 G~lv~~~~~~~~~--------------~~~~~~l~~~~~~~~~~~~~~~~~~~~~dG~~~~~~~ 213 (221)
T 3u81_A 164 TVLLADNVIVPGT--------------PDFLAYVRGSSSFECTHYSSYLEYMKVVDGLEKAIYQ 213 (221)
T ss_dssp CEEEESCCCCCCC--------------HHHHHHHHHCTTEEEEEEEEEETTTTEEEEEEEEEEC
T ss_pred eEEEEeCCCCcch--------------HHHHHHHhhCCCceEEEcccccccCCCCCceEEEEEe
Confidence 9999999999875 6799999999999999999 89999999875
No 14
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.96 E-value=9.8e-28 Score=204.94 Aligned_cols=206 Identities=28% Similarity=0.494 Sum_probs=164.7
Q ss_pred CChhHHHHHHhccC-ChHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCE
Q 023645 68 VTPPLYDYILRNVR-EPEILRQLREETAGMRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGC 146 (279)
Q Consensus 68 ~~~~l~~Y~~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~ 146 (279)
.++.+++|+.++.. +++.+.++++.+.... .+.+.+....++..++...++.+|||||||+|..+..+++.++ +++
T Consensus 4 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~ 80 (233)
T 2gpy_A 4 IEERLKHYLEKQIPARDQYIEQMEREAHEQQ--VPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EAT 80 (233)
T ss_dssp -CHHHHHHHHTTCCCCCHHHHHHHHHHHHTT--CCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCE
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHHHcC--CCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCE
Confidence 56788999999864 5888999988876553 4468999999999999988999999999999999999999987 789
Q ss_pred EEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEE
Q 023645 147 LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 147 v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
|+++|+++.+++.|+++++..++.++++++.+|+.+.++.... +++||+||++.....+..+++.+.++|+|||+++
T Consensus 81 v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~---~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv 157 (233)
T 2gpy_A 81 IVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLEL---YPLFDVLFIDAAKGQYRRFFDMYSPMVRPGGLIL 157 (233)
T ss_dssp EEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTT---SCCEEEEEEEGGGSCHHHHHHHHGGGEEEEEEEE
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhccc---CCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 9999999999999999999999887899999999876654411 3689999999988888999999999999999999
Q ss_pred EeCCCCCCcccCccc----CChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEEC
Q 023645 227 IDNVLWHGKVADQMV----NDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQKR 279 (279)
Q Consensus 227 ~dd~~~~g~~~~~~~----~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~~ 279 (279)
++|++|.|.+.++.. .......+++|++.+.+++.+.++++|+++|+.+++|+
T Consensus 158 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~p~~dG~~~~~~~ 214 (233)
T 2gpy_A 158 SDNVLFRGLVAETDIEHKRHKQLATKIDTYNQWLLEHPQYDTRIFPVGDGIAISIKR 214 (233)
T ss_dssp EETTTC-------------------------CTTTTCTTEEEEEECSTTCEEEEEEC
T ss_pred EEcCCcCCccCCccccccchhHHHHHHHHHHHHHHhCCCeEEEEEEcCCeEEEEEEc
Confidence 999999997765431 11223568889999999999999999999999999985
No 15
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=99.79 E-value=2.2e-18 Score=143.51 Aligned_cols=151 Identities=16% Similarity=0.118 Sum_probs=117.2
Q ss_pred cCCCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCC--CCcE
Q 023645 96 MRGSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV--SHKV 173 (279)
Q Consensus 96 ~~~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~--~~~v 173 (279)
.+.+.+.+++.++++|.. ...++++|||||| |++|+++++. + +++|+++|.+++..+.|+++++.+|+ .+++
T Consensus 9 ~~~P~~~v~~~~~~~L~~--~l~~a~~VLEiGt--GySTl~lA~~-~-~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I 82 (202)
T 3cvo_A 9 QMRPELTMPPAEAEALRM--AYEEAEVILEYGS--GGSTVVAAEL-P-GKHVTSVESDRAWARMMKAWLAANPPAEGTEV 82 (202)
T ss_dssp CCCCCCCSCHHHHHHHHH--HHHHCSEEEEESC--SHHHHHHHTS-T-TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEE
T ss_pred CCCCCccCCHHHHHHHHH--HhhCCCEEEEECc--hHHHHHHHHc-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCce
Confidence 445677899999999988 4457899999998 6899999984 4 68999999999999999999999998 8899
Q ss_pred EEEEcChhhH--------------HHHHH----hCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 174 KIKHGLAADS--------------LKALI----LNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 174 ~~~~gd~~~~--------------l~~~~----~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
+++.+|+.+. ++... ...+.++||+||+|+.+.. .++..+.++|+|||+|++||+.+.+.
T Consensus 83 ~~~~gda~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~~--~~~~~~l~~l~~GG~Iv~DNv~~r~~ 160 (202)
T 3cvo_A 83 NIVWTDIGPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFRV--GCALATAFSITRPVTLLFDDYSQRRW 160 (202)
T ss_dssp EEEECCCSSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSHH--HHHHHHHHHCSSCEEEEETTGGGCSS
T ss_pred EEEEeCchhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCch--hHHHHHHHhcCCCeEEEEeCCcCCcc
Confidence 9999996543 22211 1111378999999998663 77778889999999999999876654
Q ss_pred ccCcccCChhhHHHHHHHHHhhhCCCeEE
Q 023645 236 VADQMVNDAKTISIRNFNKNLMEDERVSI 264 (279)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 264 (279)
-. .+.+|.+.+...++.-.
T Consensus 161 y~----------~v~~~~~~~~~~~~~a~ 179 (202)
T 3cvo_A 161 QH----------QVEEFLGAPLMIGRLAA 179 (202)
T ss_dssp GG----------GGHHHHCCCEEETTEEE
T ss_pred hH----------HHHHHHhHHhhcCceEE
Confidence 21 24667666655555443
No 16
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=99.73 E-value=7.7e-18 Score=147.30 Aligned_cols=160 Identities=13% Similarity=0.179 Sum_probs=125.7
Q ss_pred CCCHHHHHHHHHHHhh----cCCCEEEEEcCccCHHHHHHHHHCC----CCCEEEEEeCChh------------------
Q 023645 102 QVSPDQAQLLAMLVQI----LGAQRCIEVGVYTGYSSLAIALVLP----ESGCLVACERDAR------------------ 155 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~----~~~~~VLEiG~G~G~~t~~la~~~~----~~~~v~~iD~s~~------------------ 155 (279)
.+.......+..+++. ..++.|||+||+.|+++++++..++ ++.+|+++|..+.
T Consensus 85 mv~~~r~~~L~~l~~~v~~~~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~ 164 (282)
T 2wk1_A 85 MIGIKRLENIRQCVEDVIGNNVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALH 164 (282)
T ss_dssp SSHHHHHHHHHHHHHHHHHTTCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGG
T ss_pred ccCHHHHHHHHHHHHHHHhcCCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccc
Confidence 3556777777777765 4588999999999999999988763 2678999996431
Q ss_pred --------HHHHHHHHHHHhCCC-CcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCc-cchHHHHHHHHccCCCCcEE
Q 023645 156 --------SLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-RMYQEYFELLLQLIRVGGII 225 (279)
Q Consensus 156 --------~~~~a~~~~~~~g~~-~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~-~~~~~~l~~~~~~Lk~gG~l 225 (279)
..+.+++++++.|+. ++++++.|++.+.++.+. .++||+||+|+++ ..+..+++.+.++|+|||+|
T Consensus 165 ~~~~~~~~~~~~ar~n~~~~gl~~~~I~li~Gda~etL~~~~----~~~~d~vfIDaD~y~~~~~~Le~~~p~L~pGGiI 240 (282)
T 2wk1_A 165 RRNSVLAVSEEEVRRNFRNYDLLDEQVRFLPGWFKDTLPTAP----IDTLAVLRMDGDLYESTWDTLTNLYPKVSVGGYV 240 (282)
T ss_dssp GGHHHHCCCHHHHHHHHHHTTCCSTTEEEEESCHHHHSTTCC----CCCEEEEEECCCSHHHHHHHHHHHGGGEEEEEEE
T ss_pred cccccchhHHHHHHHHHHHcCCCcCceEEEEeCHHHHHhhCC----CCCEEEEEEcCCccccHHHHHHHHHhhcCCCEEE
Confidence 467789999999994 889999999998877541 4689999999986 45778999999999999999
Q ss_pred EEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEEE
Q 023645 226 VIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQK 278 (279)
Q Consensus 226 v~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~~ 278 (279)
++||+.| ....+.++++|++. .++...++++..+...-||
T Consensus 241 v~DD~~~---------~~G~~~Av~Ef~~~----~~i~~~i~~~~~~~v~~rk 280 (282)
T 2wk1_A 241 IVDDYMM---------CPPCKDAVDEYRAK----FDIADELITIDRDGVYWQR 280 (282)
T ss_dssp EESSCTT---------CHHHHHHHHHHHHH----TTCCSCCEECSSSCEEEEC
T ss_pred EEcCCCC---------CHHHHHHHHHHHHh----cCCceEEEEecCEEEEEEe
Confidence 9999864 12235677777644 4566778888776665555
No 17
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.72 E-value=2.4e-17 Score=146.90 Aligned_cols=148 Identities=23% Similarity=0.356 Sum_probs=114.0
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh--CC-CCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
..+++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ ..+++++.+|+.+.++.. .+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-----~~ 180 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHES-VEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH-----KN 180 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTT-CCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC-----TT
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc-----CC
Confidence 4578999999999999999998654 689999999999999999988653 33 467999999998876642 57
Q ss_pred cEEEEEEeCCc------cch-HHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEe
Q 023645 195 SYDFAFVDAEK------RMY-QEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMV 267 (279)
Q Consensus 195 ~fDlI~id~~~------~~~-~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l 267 (279)
+||+|++|... ..+ .++++.+.++|+|||++++++- ... ........+.++++.+..+.++..+.+
T Consensus 181 ~fD~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~~----~~~---~~~~~~~~~~~~l~~vF~~v~~~~~~i 253 (314)
T 2b2c_A 181 EFDVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQGE----SVW---LHLPLIAHLVAFNRKIFPAVTYAQSIV 253 (314)
T ss_dssp CEEEEEECCC-------------HHHHHHHHEEEEEEEEEECC----CTT---TCHHHHHHHHHHHHHHCSEEEEEEEEC
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEECC----Ccc---cCHHHHHHHHHHHHHHCCcceEEEEEe
Confidence 89999998742 112 6889999999999999999862 111 123345567888888877777888888
Q ss_pred ec---CC-ceEEEEE
Q 023645 268 PI---GD-GMTICQK 278 (279)
Q Consensus 268 p~---~~-G~~i~~~ 278 (279)
|. |+ |+.+|.|
T Consensus 254 P~~~~g~~g~~~ask 268 (314)
T 2b2c_A 254 STYPSGSMGYLICAK 268 (314)
T ss_dssp TTSGGGEEEEEEEES
T ss_pred cCcCCCceEEEEEeC
Confidence 87 45 8888876
No 18
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.71 E-value=4.2e-17 Score=144.75 Aligned_cols=147 Identities=18% Similarity=0.341 Sum_probs=116.1
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHH--hCC-CCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AGV-SHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g~-~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
..+++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++.. .++ .++++++.+|+.+.++.. .+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~-----~~ 167 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPS-VESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN-----QD 167 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC-----SS
T ss_pred CCCCEEEEECCCchHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC-----CC
Confidence 4578999999999999999998644 57999999999999999999875 344 467999999998876542 57
Q ss_pred cEEEEEEeCCcc-------chHHHHHHHHccCCCCcEEEEeC-CCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEE
Q 023645 195 SYDFAFVDAEKR-------MYQEYFELLLQLIRVGGIIVIDN-VLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISM 266 (279)
Q Consensus 195 ~fDlI~id~~~~-------~~~~~l~~~~~~Lk~gG~lv~dd-~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 266 (279)
+||+||+|.... ...++++.+.++|+|||++++++ ..|.. ......++++++.+..+.++..+.
T Consensus 168 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~--------~~~~~~~~~~l~~~f~~v~~~~~~ 239 (304)
T 2o07_A 168 AFDVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQGECQWLH--------LDLIKEMRQFCQSLFPVVAYAYCT 239 (304)
T ss_dssp CEEEEEEECC-----------CHHHHHHHHHEEEEEEEEEEEECTTTC--------HHHHHHHHHHHHHHCSEEEEEEEE
T ss_pred CceEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEecCCcccc--------hHHHHHHHHHHHHhCCCceeEEEE
Confidence 899999987632 23568999999999999999987 33432 133456888888888888888888
Q ss_pred eecC----CceEEEEE
Q 023645 267 VPIG----DGMTICQK 278 (279)
Q Consensus 267 lp~~----~G~~i~~~ 278 (279)
+|.. .|+.+|.|
T Consensus 240 vP~~~~g~~g~~~as~ 255 (304)
T 2o07_A 240 IPTYPSGQIGFMLCSK 255 (304)
T ss_dssp CTTSGGGEEEEEEEES
T ss_pred eccccCcceEEEEEeC
Confidence 8873 47888875
No 19
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.71 E-value=3.4e-16 Score=137.41 Aligned_cols=108 Identities=15% Similarity=0.096 Sum_probs=92.9
Q ss_pred HHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 113 ~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
.++...++.+|||||||+|..+..++...+ +++|+++|+++++++.|+++++..|+ ++++++++|+.+. +
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~~-ga~V~gIDis~~~l~~Ar~~~~~~gl-~~v~~v~gDa~~l-~------- 185 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHVY-GMRVNVVEIEPDIAELSRKVIEGLGV-DGVNVITGDETVI-D------- 185 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHTT-CCEEEEEESSHHHHHHHHHHHHHHTC-CSEEEEESCGGGG-G-------
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHcc-CCEEEEEECCHHHHHHHHHHHHhcCC-CCeEEEECchhhC-C-------
Confidence 356677899999999999876644444444 68999999999999999999999999 7899999999864 2
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+++||+||+++...+...+++.+.+.|||||.|++.+.
T Consensus 186 d~~FDvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 186 GLEFDVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp GCCCSEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCcCEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 47899999988877888999999999999999999874
No 20
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.71 E-value=1e-16 Score=134.80 Aligned_cols=163 Identities=13% Similarity=0.090 Sum_probs=119.2
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCC----cEEEEEc
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH----KVKIKHG 178 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~----~v~~~~g 178 (279)
+.+...+.+..++...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...++.+ +++++++
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (219)
T 3jwg_A 13 LNQQRLGTVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDKS-FEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQS 91 (219)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHTSTT-CCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEEC
T ss_pred chHHHHHHHHHHHhhcCCCEEEEecCCCCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeC
Confidence 3445555566666667788999999999999999998764 5799999999999999999998777654 7999999
Q ss_pred ChhhHHHHHHhCCCCCcEEEEEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCCCCcccC---------ccc-CC
Q 023645 179 LAADSLKALILNGEASSYDFAFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLWHGKVAD---------QMV-ND 243 (279)
Q Consensus 179 d~~~~l~~~~~~~~~~~fDlI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~---------~~~-~~ 243 (279)
|+.... .. .++||+|++..... ....+++.+.+.|||||+++.......+.... ... ..
T Consensus 92 d~~~~~-~~-----~~~fD~V~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (219)
T 3jwg_A 92 SLVYRD-KR-----FSGYDAATVIEVIEHLDENRLQAFEKVLFEFTRPQTVIVSTPNKEYNFHYGNLFEGNLRHRDHRFE 165 (219)
T ss_dssp CSSSCC-GG-----GTTCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBGGGGGCCCCT-----GGGCCTTS
T ss_pred cccccc-cc-----cCCCCEEEEHHHHHhCCHHHHHHHHHHHHHhhCCCEEEEEccchhhhhhhcccCcccccccCceee
Confidence 984321 11 47899999876522 23578999999999999887754332211110 000 01
Q ss_pred hhhHHHHHHHHHhhhCCCeEEEEeecCCc
Q 023645 244 AKTISIRNFNKNLMEDERVSISMVPIGDG 272 (279)
Q Consensus 244 ~~~~~~~~~~~~l~~~~~~~~~~lp~~~G 272 (279)
-....+++|.+.+.+..++++...+++++
T Consensus 166 ~~~~~l~~~~~~l~~~~Gf~v~~~~~g~~ 194 (219)
T 3jwg_A 166 WTRKEFQTWAVKVAEKYGYSVRFLQIGEI 194 (219)
T ss_dssp BCHHHHHHHHHHHHHHHTEEEEEEEESCC
T ss_pred ecHHHHHHHHHHHHHHCCcEEEEEecCCc
Confidence 13446778888888888999998887765
No 21
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.70 E-value=1e-16 Score=134.76 Aligned_cols=163 Identities=15% Similarity=0.157 Sum_probs=119.9
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCC----cEEEEEc
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH----KVKIKHG 178 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~----~v~~~~g 178 (279)
+.+.....+...+...++.+|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...++.. +++++++
T Consensus 13 ~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 91 (217)
T 3jwh_A 13 LNQQRMNGVVAALKQSNARRVIDLGCGQGNLLKILLKDSF-FEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQG 91 (217)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEEETCTTCHHHHHHHHCTT-CSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhCC-CCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeC
Confidence 3445555666666667788999999999999999998654 5799999999999999999998777764 7999999
Q ss_pred ChhhHHHHHHhCCCCCcEEEEEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCCCCccc---------Cccc-CC
Q 023645 179 LAADSLKALILNGEASSYDFAFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLWHGKVA---------DQMV-ND 243 (279)
Q Consensus 179 d~~~~l~~~~~~~~~~~fDlI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~---------~~~~-~~ 243 (279)
|+... +.. .++||+|++..... ....+++.+.++|||||++++......+... .... ..
T Consensus 92 d~~~~-~~~-----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (217)
T 3jwh_A 92 ALTYQ-DKR-----FHGYDAATVIEVIEHLDLSRLGAFERVLFEFAQPKIVIVTTPNIEYNVKFANLPAGKLRHKDHRFE 165 (217)
T ss_dssp CTTSC-CGG-----GCSCSEEEEESCGGGCCHHHHHHHHHHHHTTTCCSEEEEEEEBHHHHHHTC-----------CCSC
T ss_pred Ccccc-ccc-----CCCcCEEeeHHHHHcCCHHHHHHHHHHHHHHcCCCEEEEEccCcccchhhcccccccccccccccc
Confidence 98432 111 47899999876532 3468899999999999988875443111100 0000 11
Q ss_pred hhhHHHHHHHHHhhhCCCeEEEEeecCCc
Q 023645 244 AKTISIRNFNKNLMEDERVSISMVPIGDG 272 (279)
Q Consensus 244 ~~~~~~~~~~~~l~~~~~~~~~~lp~~~G 272 (279)
-....+++|.+.+.++.+|+++..++++.
T Consensus 166 ~~~~~l~~~~~~~~~~~Gf~v~~~~~g~~ 194 (217)
T 3jwh_A 166 WTRSQFQNWANKITERFAYNVQFQPIGEA 194 (217)
T ss_dssp BCHHHHHHHHHHHHHHSSEEEEECCCSCC
T ss_pred cCHHHHHHHHHHHHHHcCceEEEEecCCc
Confidence 13446788888888899999999888764
No 22
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.70 E-value=3.4e-16 Score=130.97 Aligned_cols=119 Identities=18% Similarity=0.207 Sum_probs=97.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
...+.....+...+...++.+|||+|||+|..+..+++. +++|+++|+++++++.|+++++..++.++++++++|+.
T Consensus 38 ~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 114 (204)
T 3njr_A 38 ITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP 114 (204)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred CCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh
Confidence 344444444555555667789999999999999999987 57999999999999999999999998867999999998
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+.++. ..+||+||++... ... +++.+.+.|+|||.+++..+.
T Consensus 115 ~~~~~------~~~~D~v~~~~~~-~~~-~l~~~~~~LkpgG~lv~~~~~ 156 (204)
T 3njr_A 115 AALAD------LPLPEAVFIGGGG-SQA-LYDRLWEWLAPGTRIVANAVT 156 (204)
T ss_dssp GGGTT------SCCCSEEEECSCC-CHH-HHHHHHHHSCTTCEEEEEECS
T ss_pred hhccc------CCCCCEEEECCcc-cHH-HHHHHHHhcCCCcEEEEEecC
Confidence 75432 3579999998754 344 899999999999999997653
No 23
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.70 E-value=3.8e-16 Score=130.08 Aligned_cols=121 Identities=16% Similarity=0.278 Sum_probs=101.3
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
...+....+...+...++.+|||+|||+|..+..+++..+ .++|+++|+++++++.|+++++..++ ++++++++|+.+
T Consensus 24 ~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~-~~v~~~~~d~~~ 101 (204)
T 3e05_A 24 TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLMP-NGRIFALERNPQYLGFIRDNLKKFVA-RNVTLVEAFAPE 101 (204)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHCT-TSEEEEEECCHHHHHHHHHHHHHHTC-TTEEEEECCTTT
T ss_pred ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeCChhh
Confidence 3444444444555566788999999999999999999875 68999999999999999999999888 569999999976
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
.++. .++||+|+++........+++.+.+.|+|||.+++....
T Consensus 102 ~~~~------~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 144 (204)
T 3e05_A 102 GLDD------LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAVT 144 (204)
T ss_dssp TCTT------SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEECB
T ss_pred hhhc------CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEecc
Confidence 5432 367999999987778889999999999999999997554
No 24
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.69 E-value=6.5e-16 Score=127.22 Aligned_cols=107 Identities=19% Similarity=0.218 Sum_probs=90.0
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..++.. + ..+|+++|+++++++.|+++++..++ ++++++++|+.+.++.. .+++||
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~----~~~~fD 115 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR-G-AASVLFVESDQRSAAVIARNIEALGL-SGATLRRGAVAAVVAAG----TTSPVD 115 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEECCHHHHHHHHHHHHHHTC-SCEEEEESCHHHHHHHC----CSSCCS
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC-C-CCeEEEEECCHHHHHHHHHHHHHcCC-CceEEEEccHHHHHhhc----cCCCcc
Confidence 46789999999999999987774 2 46899999999999999999999988 56999999998776543 147899
Q ss_pred EEEEeCCcc----chHHHHHHHHc--cCCCCcEEEEeCCC
Q 023645 198 FAFVDAEKR----MYQEYFELLLQ--LIRVGGIIVIDNVL 231 (279)
Q Consensus 198 lI~id~~~~----~~~~~l~~~~~--~Lk~gG~lv~dd~~ 231 (279)
+|+++.+.. .....++.+.+ +|+|||++++....
T Consensus 116 ~i~~~~p~~~~~~~~~~~l~~~~~~~~L~pgG~l~~~~~~ 155 (189)
T 3p9n_A 116 LVLADPPYNVDSADVDAILAALGTNGWTREGTVAVVERAT 155 (189)
T ss_dssp EEEECCCTTSCHHHHHHHHHHHHHSSSCCTTCEEEEEEET
T ss_pred EEEECCCCCcchhhHHHHHHHHHhcCccCCCeEEEEEecC
Confidence 999997643 36778888888 99999999997654
No 25
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.69 E-value=5.3e-17 Score=138.99 Aligned_cols=116 Identities=16% Similarity=0.296 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHH---CCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 105 PDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALV---LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 105 ~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~---~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
+....++..++...++.+|||||||+|+++..+++. +.++++|+++|+++++++.|+ ++.++++++++|+.
T Consensus 67 p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~------~~~~~v~~~~gD~~ 140 (236)
T 2bm8_A 67 PDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA------SDMENITLHQGDCS 140 (236)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG------GGCTTEEEEECCSS
T ss_pred HHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh------ccCCceEEEECcch
Confidence 777888888887778899999999999999999987 444789999999999988887 22357999999997
Q ss_pred hH--HHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHc-cCCCCcEEEEeCC
Q 023645 182 DS--LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQ-LIRVGGIIVIDNV 230 (279)
Q Consensus 182 ~~--l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~-~Lk~gG~lv~dd~ 230 (279)
+. ++.. ...+||+|+++..+..+..++..+.+ +|||||+|+++|+
T Consensus 141 ~~~~l~~~----~~~~fD~I~~d~~~~~~~~~l~~~~r~~LkpGG~lv~~d~ 188 (236)
T 2bm8_A 141 DLTTFEHL----REMAHPLIFIDNAHANTFNIMKWAVDHLLEEGDYFIIEDM 188 (236)
T ss_dssp CSGGGGGG----SSSCSSEEEEESSCSSHHHHHHHHHHHTCCTTCEEEECSC
T ss_pred hHHHHHhh----ccCCCCEEEECCchHhHHHHHHHHHHhhCCCCCEEEEEeC
Confidence 64 3322 12479999999887788889999996 9999999999987
No 26
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.68 E-value=3.3e-16 Score=136.06 Aligned_cols=116 Identities=13% Similarity=0.241 Sum_probs=94.2
Q ss_pred HHHHHHHh--hcCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHH
Q 023645 109 QLLAMLVQ--ILGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 185 (279)
Q Consensus 109 ~~l~~l~~--~~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~ 185 (279)
.++..++. ..++.+|||||||+|..+..+++.++ ++++|+|+|+|+.|++.|+++++..+...+++++++|+.+. +
T Consensus 58 ~~i~~l~~~~~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~-~ 136 (261)
T 4gek_A 58 SMIGMLAERFVQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDI-A 136 (261)
T ss_dssp HHHHHHHHHHCCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTC-C
T ss_pred HHHHHHHHHhCCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccccc-c
Confidence 33444443 34678999999999999999998864 36799999999999999999999888888899999999754 1
Q ss_pred HHHhCCCCCcEEEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 186 ALILNGEASSYDFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 186 ~~~~~~~~~~fDlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
.++||+|++.... .+...+++++.+.|||||++++.+...
T Consensus 137 -------~~~~d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~~~ 181 (261)
T 4gek_A 137 -------IENASMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEKFS 181 (261)
T ss_dssp -------CCSEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEBC
T ss_pred -------ccccccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEeccC
Confidence 3679999987542 234568999999999999999876554
No 27
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.68 E-value=3.5e-16 Score=127.23 Aligned_cols=116 Identities=12% Similarity=0.182 Sum_probs=94.2
Q ss_pred HHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHH
Q 023645 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALI 188 (279)
Q Consensus 109 ~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~ 188 (279)
.++..+....++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++++..++.++++++.+|+.+.++..
T Consensus 21 ~~~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~- 97 (177)
T 2esr_A 21 AIFNMIGPYFNGGRVLDLFAGSGGLAIEAVSR-G-MSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL- 97 (177)
T ss_dssp HHHHHHCSCCCSCEEEEETCTTCHHHHHHHHT-T-CCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB-
T ss_pred HHHHHHHhhcCCCeEEEeCCCCCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh-
Confidence 33333333456789999999999999999886 3 46999999999999999999999888778999999998866544
Q ss_pred hCCCCCcEEEEEEeCCc--cchHHHHHHHH--ccCCCCcEEEEeCCC
Q 023645 189 LNGEASSYDFAFVDAEK--RMYQEYFELLL--QLIRVGGIIVIDNVL 231 (279)
Q Consensus 189 ~~~~~~~fDlI~id~~~--~~~~~~l~~~~--~~Lk~gG~lv~dd~~ 231 (279)
.++||+|+++.+. ......++.+. ++|+|||++++....
T Consensus 98 ----~~~fD~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 140 (177)
T 2esr_A 98 ----TGRFDLVFLDPPYAKETIVATIEALAAKNLLSEQVMVVCETDK 140 (177)
T ss_dssp ----CSCEEEEEECCSSHHHHHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred ----cCCCCEEEECCCCCcchHHHHHHHHHhCCCcCCCcEEEEEECC
Confidence 4679999999773 44566777776 999999999997544
No 28
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.67 E-value=2.4e-16 Score=127.89 Aligned_cols=116 Identities=16% Similarity=0.151 Sum_probs=94.6
Q ss_pred HHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHH
Q 023645 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 108 ~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
...+...+...++.+|||+|||+|..+..+++..+ +.+|+++|+++.+++.|+++++..+..+++ ++++|+.+.++..
T Consensus 14 ~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~ 91 (178)
T 3hm2_A 14 RALAISALAPKPHETLWDIGGGSGSIAIEWLRSTP-QTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV 91 (178)
T ss_dssp HHHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTSS-SEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC
T ss_pred HHHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHCC-CCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc
Confidence 33344444556677999999999999999999875 689999999999999999999998887678 8889987654421
Q ss_pred HhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 188 ILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
.++||+|++...... ..+++.+.+.|+|||.+++....
T Consensus 92 -----~~~~D~i~~~~~~~~-~~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 92 -----PDNPDVIFIGGGLTA-PGVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp -----CSCCSEEEECC-TTC-TTHHHHHHHTCCTTCEEEEEECS
T ss_pred -----CCCCCEEEECCcccH-HHHHHHHHHhcCCCCEEEEEeec
Confidence 378999999876554 67899999999999999997654
No 29
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.67 E-value=5e-16 Score=138.46 Aligned_cols=149 Identities=15% Similarity=0.140 Sum_probs=110.2
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHH--hC-C-CCcEEEEEcChhhHHHHHHhCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AG-V-SHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g-~-~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
..+++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++.. .+ + ..+++++.+|+.+.++.. .
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-----~ 149 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPT-VEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT-----E 149 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC-----C
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc-----C
Confidence 4678999999999999999998654 67999999999999999998865 22 2 457999999998876553 5
Q ss_pred CcEEEEEEeCCccc----------hHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeE
Q 023645 194 SSYDFAFVDAEKRM----------YQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVS 263 (279)
Q Consensus 194 ~~fDlI~id~~~~~----------~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 263 (279)
++||+|++|..... ..++++.+.+.|+|||++++... .... ........+.+.++.+..+..+.
T Consensus 150 ~~fD~Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~----~~~~--~~~~~~~~~~~~l~~~F~~v~~~ 223 (314)
T 1uir_A 150 ERYDVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQTG----MILL--THHRVHPVVHRTVREAFRYVRSY 223 (314)
T ss_dssp CCEEEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEEEE----EECC-----CHHHHHHHHHHTTCSEEEEE
T ss_pred CCccEEEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEEcc----Cccc--cCHHHHHHHHHHHHHHCCceEEE
Confidence 78999999976433 47899999999999999999521 1110 11123334555555555555566
Q ss_pred EEEeecCCc---eEEEEE
Q 023645 264 ISMVPIGDG---MTICQK 278 (279)
Q Consensus 264 ~~~lp~~~G---~~i~~~ 278 (279)
.+.+|..+| +.+|.|
T Consensus 224 ~~~vP~~~g~~~~~~as~ 241 (314)
T 1uir_A 224 KNHIPGFFLNFGFLLASD 241 (314)
T ss_dssp EEEEGGGTEEEEEEEEES
T ss_pred EEecCCCCCeEEEEEEEC
Confidence 677888766 567765
No 30
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.66 E-value=1.6e-15 Score=124.15 Aligned_cols=135 Identities=13% Similarity=0.138 Sum_probs=97.2
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++. +++|+++|+++++++.|+++++..++ +++++++++..+..... +++||
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~~~~~l~~~~-----~~~fD 91 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGI-ENTELILDGHENLDHYV-----REPIR 91 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTC-CCEEEEESCGGGGGGTC-----CSCEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEeCcHHHHHhhc-----cCCcC
Confidence 35679999999999999999986 57999999999999999999999988 56999997775432111 57899
Q ss_pred EEEEeCC------------ccchHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEE
Q 023645 198 FAFVDAE------------KRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSIS 265 (279)
Q Consensus 198 lI~id~~------------~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 265 (279)
+|+++.. .......++.+.+.|||||.+++. .|.+... .......+.+|.+.+.. ..+...
T Consensus 92 ~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~--~~~~~~~----~~~~~~~~~~~~~~l~~-~~~~~~ 164 (185)
T 3mti_A 92 AAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIM--IYYGHDG----GDMEKDAVLEYVIGLDQ-RVFTAM 164 (185)
T ss_dssp EEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEE--EC----------CHHHHHHHHHHHHSCT-TTEEEE
T ss_pred EEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEE--EeCCCCC----CHHHHHHHHHHHHhCCC-ceEEEE
Confidence 9998731 133456789999999999999984 3444321 12333456666666533 346655
Q ss_pred Eee
Q 023645 266 MVP 268 (279)
Q Consensus 266 ~lp 268 (279)
...
T Consensus 165 ~~~ 167 (185)
T 3mti_A 165 LYQ 167 (185)
T ss_dssp EEE
T ss_pred Eeh
Confidence 444
No 31
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.66 E-value=5.2e-16 Score=133.44 Aligned_cols=119 Identities=13% Similarity=0.234 Sum_probs=98.0
Q ss_pred HHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHH
Q 023645 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 108 ~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
..++..+....++.+|||||||+|..+..+++..+ ++|+++|+++.+++.|++++...++.++++++++|+.+.. .
T Consensus 35 ~~~l~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~- 110 (257)
T 3f4k_A 35 RKAVSFINELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLP-F- 110 (257)
T ss_dssp HHHHTTSCCCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCS-S-
T ss_pred HHHHHHHhcCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCC-C-
Confidence 33343343455678999999999999999999875 4999999999999999999999999888999999996432 1
Q ss_pred HhCCCCCcEEEEEEeCCc--cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 188 ILNGEASSYDFAFVDAEK--RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~~--~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
.+++||+|++.... -+...+++.+.++|+|||++++.+..|..
T Consensus 111 ----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 155 (257)
T 3f4k_A 111 ----QNEELDLIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSEASWFT 155 (257)
T ss_dssp ----CTTCEEEEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred ----CCCCEEEEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEEeeccC
Confidence 15799999987642 25778999999999999999999876554
No 32
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.66 E-value=1.1e-15 Score=131.35 Aligned_cols=123 Identities=21% Similarity=0.223 Sum_probs=100.9
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
..+.....+...+...++.+|||||||+|..+..+++.. +.+|+++|+++.+++.|+++++..++.++++++++|+.+
T Consensus 20 ~~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~ 97 (256)
T 1nkv_A 20 FTEEKYATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAG 97 (256)
T ss_dssp CCHHHHHHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTT
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHh
Confidence 345555555555566678899999999999999999886 469999999999999999999999988789999999976
Q ss_pred HHHHHHhCCCCCcEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 183 SLKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
... +++||+|++... ..+...+++++.++|||||.+++.+..|..
T Consensus 98 ~~~-------~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~~~~ 145 (256)
T 1nkv_A 98 YVA-------NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEPYWRQ 145 (256)
T ss_dssp CCC-------SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEEEETT
T ss_pred CCc-------CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecCcccC
Confidence 421 478999998654 235678999999999999999998766543
No 33
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.66 E-value=9e-16 Score=134.69 Aligned_cols=145 Identities=17% Similarity=0.179 Sum_probs=108.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh--CC--------CCcEEEEEcChhhHHHHH
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV--------SHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~--------~~~v~~~~gd~~~~l~~~ 187 (279)
..+++|||||||+|..+..+++. + ..+|+++|+++.+++.|++++ .. ++ ..+++++.+|+.+.++.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~-~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-D-VDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-C-CSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45789999999999999999987 5 679999999999999999988 43 32 45799999999877653
Q ss_pred HhCCCCCcEEEEEEeCCc-----cc--hHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCC
Q 023645 188 ILNGEASSYDFAFVDAEK-----RM--YQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDE 260 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~~-----~~--~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~ 260 (279)
.++||+|++|... .. ..++++.+.+.|+|||+++++... . .........+.+.++.+..+.
T Consensus 150 -----~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~~~----~---~~~~~~~~~~~~~l~~~f~~v 217 (281)
T 1mjf_A 150 -----NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQAGS----V---YLFTDELISAYKEMKKVFDRV 217 (281)
T ss_dssp -----CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEEEEE----T---TTSHHHHHHHHHHHHHHCSEE
T ss_pred -----cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEcCC----c---ccCHHHHHHHHHHHHHHCCce
Confidence 3689999999752 11 367899999999999999997321 1 112233345566666665555
Q ss_pred CeEEEEeecCCc---eEEEEE
Q 023645 261 RVSISMVPIGDG---MTICQK 278 (279)
Q Consensus 261 ~~~~~~lp~~~G---~~i~~~ 278 (279)
.+..+.+|..+| +.+|.|
T Consensus 218 ~~~~~~vP~~~g~~~~~~as~ 238 (281)
T 1mjf_A 218 YYYSFPVIGYASPWAFLVGVK 238 (281)
T ss_dssp EEEEECCTTSSSSEEEEEEEE
T ss_pred EEEEEecCCCCceEEEEEeeC
Confidence 566677887655 777776
No 34
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.65 E-value=1.1e-16 Score=136.86 Aligned_cols=111 Identities=17% Similarity=0.177 Sum_probs=89.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|.++.++++..+ .++|+||+++++++.|+++.+..+. +++++.+|+.+.+..+ .+++||
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~--~~v~~id~~~~~~~~a~~~~~~~~~--~~~~~~~~a~~~~~~~----~~~~FD 130 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPI--DEHWIIECNDGVFQRLRDWAPRQTH--KVIPLKGLWEDVAPTL----PDGHFD 130 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCE--EEEEEEECCHHHHHHHHHHGGGCSS--EEEEEESCHHHHGGGS----CTTCEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCC--cEEEEEeCCHHHHHHHHHHHhhCCC--ceEEEeehHHhhcccc----cccCCc
Confidence 3567999999999999999987654 5899999999999999998886554 5899999997665433 257899
Q ss_pred EEEEeCC--------ccchHHHHHHHHccCCCCcEEEEeCCCCCCcc
Q 023645 198 FAFVDAE--------KRMYQEYFELLLQLIRVGGIIVIDNVLWHGKV 236 (279)
Q Consensus 198 lI~id~~--------~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~ 236 (279)
.|+.|.. ..+...+++++.++|||||++++.+....+..
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~~~~~~~~ 177 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLTSWGEL 177 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHHHHHHH
T ss_pred eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEecCCchhh
Confidence 9998864 22356788999999999999999876655543
No 35
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.65 E-value=3.2e-15 Score=123.56 Aligned_cols=140 Identities=11% Similarity=0.163 Sum_probs=103.1
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.|+++++..++.++++++++|+.+..... +++|
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~f 94 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYI-----DCPV 94 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTC-----CSCE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhc-----cCCc
Confidence 34667999999999999999999875467999999999999999999999988778999999987653222 5789
Q ss_pred EEEEEeCCc------------cchHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEE
Q 023645 197 DFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSI 264 (279)
Q Consensus 197 DlI~id~~~------------~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 264 (279)
|+|+++.+. .....+++.+.++|+|||.+++.. |.+.. ........+.+|.+.+ ...++..
T Consensus 95 D~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~--~~~~~----~~~~~~~~~~~~~~~l-~~~~~~v 167 (197)
T 3eey_A 95 KAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVI--YYGGD----TGFEEKEKVLEFLKGV-DQKKFIV 167 (197)
T ss_dssp EEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEE--CCBTT----TBSHHHHHHHHHHTTS-CTTTEEE
T ss_pred eEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEE--ccCCC----CcHHHHHHHHHHHHhC-CCCcEEE
Confidence 999988632 134578999999999999999854 33321 1122333445554443 2345665
Q ss_pred EEee
Q 023645 265 SMVP 268 (279)
Q Consensus 265 ~~lp 268 (279)
....
T Consensus 168 ~~~~ 171 (197)
T 3eey_A 168 QRTD 171 (197)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 5443
No 36
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.65 E-value=7.9e-16 Score=133.41 Aligned_cols=118 Identities=12% Similarity=0.232 Sum_probs=97.0
Q ss_pred HHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHH
Q 023645 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALI 188 (279)
Q Consensus 109 ~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~ 188 (279)
.++..+....++.+|||||||+|..+..+++. + .++|+++|+++.+++.|+++++..++.++++++++|+.+.. .
T Consensus 36 ~~l~~l~~~~~~~~vLDiGcG~G~~~~~la~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~- 110 (267)
T 3kkz_A 36 KALSFIDNLTEKSLIADIGCGTGGQTMVLAGH-V-TGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLP--F- 110 (267)
T ss_dssp HHHTTCCCCCTTCEEEEETCTTCHHHHHHHTT-C-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C-
T ss_pred HHHHhcccCCCCCEEEEeCCCCCHHHHHHHhc-c-CCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCC--C-
Confidence 33333333556789999999999999999987 3 57999999999999999999999999888999999996532 1
Q ss_pred hCCCCCcEEEEEEeCCc--cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 189 LNGEASSYDFAFVDAEK--RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 189 ~~~~~~~fDlI~id~~~--~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
.+++||+|++.... -+...+++.+.++|||||++++.+..|..
T Consensus 111 ---~~~~fD~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 155 (267)
T 3kkz_A 111 ---RNEELDLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSECSWFT 155 (267)
T ss_dssp ---CTTCEEEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEEEESS
T ss_pred ---CCCCEEEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEeeecC
Confidence 15789999987652 25678999999999999999998877643
No 37
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.64 E-value=3.2e-15 Score=122.11 Aligned_cols=110 Identities=15% Similarity=0.164 Sum_probs=90.2
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|+++++..++.++++++++|+.+.++.+... .++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~~-~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~--~~~fD 118 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVSR-G-MDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEE--KLQFD 118 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHT--TCCEE
T ss_pred cCCCCEEEeCCccCHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhc--CCCCC
Confidence 46779999999999999988874 2 47999999999999999999999988778999999998866543211 46899
Q ss_pred EEEEeCC--ccchHHHHHHH--HccCCCCcEEEEeCCC
Q 023645 198 FAFVDAE--KRMYQEYFELL--LQLIRVGGIIVIDNVL 231 (279)
Q Consensus 198 lI~id~~--~~~~~~~l~~~--~~~Lk~gG~lv~dd~~ 231 (279)
+|+++.+ .......++.+ .++|+|||++++....
T Consensus 119 ~i~~~~~~~~~~~~~~~~~l~~~~~L~~gG~l~~~~~~ 156 (187)
T 2fhp_A 119 LVLLDPPYAKQEIVSQLEKMLERQLLTNEAVIVCETDK 156 (187)
T ss_dssp EEEECCCGGGCCHHHHHHHHHHTTCEEEEEEEEEEEET
T ss_pred EEEECCCCCchhHHHHHHHHHHhcccCCCCEEEEEeCC
Confidence 9999977 34456677777 7899999999986443
No 38
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.64 E-value=1.6e-15 Score=130.43 Aligned_cols=120 Identities=22% Similarity=0.261 Sum_probs=101.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh
Q 023645 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (279)
Q Consensus 101 ~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (279)
..+.+.....+...+...++.+|||+|||+|..+..+++.+.+.++++++|+++++++.|+++++..++.++++++++|+
T Consensus 75 ~~~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 154 (255)
T 3mb5_A 75 QIVHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDI 154 (255)
T ss_dssp CCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCG
T ss_pred ccccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECch
Confidence 34566666677777777888999999999999999999985447899999999999999999999999988899999999
Q ss_pred hhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 181 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 181 ~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+.++ +++||+|+++.+ ....+++.+.+.|+|||.+++..
T Consensus 155 ~~~~~-------~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 194 (255)
T 3mb5_A 155 YEGIE-------EENVDHVILDLP--QPERVVEHAAKALKPGGFFVAYT 194 (255)
T ss_dssp GGCCC-------CCSEEEEEECSS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred hhccC-------CCCcCEEEECCC--CHHHHHHHHHHHcCCCCEEEEEE
Confidence 86432 568999999765 33467899999999999999854
No 39
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.64 E-value=1.5e-15 Score=126.56 Aligned_cols=110 Identities=15% Similarity=0.170 Sum_probs=88.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCC-CcEEEEEcChhhHHHHHHhCCCCCc-
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNGEASS- 195 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~l~~~~~~~~~~~- 195 (279)
.++.+|||+|||+|..+..++... ..+|+++|+++++++.|+++++..++. ++++++++|+.+.++.+ .+++
T Consensus 52 ~~~~~vLDlGcGtG~~~~~~~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~----~~~~~ 125 (201)
T 2ift_A 52 IHQSECLDGFAGSGSLGFEALSRQ--AKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQP----QNQPH 125 (201)
T ss_dssp HTTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSC----CSSCC
T ss_pred cCCCeEEEcCCccCHHHHHHHHcc--CCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhh----ccCCC
Confidence 367899999999999999877653 369999999999999999999998884 56999999997654321 1367
Q ss_pred EEEEEEeCC--ccchHHHHHHH--HccCCCCcEEEEeCCCCC
Q 023645 196 YDFAFVDAE--KRMYQEYFELL--LQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 196 fDlI~id~~--~~~~~~~l~~~--~~~Lk~gG~lv~dd~~~~ 233 (279)
||+|+++.+ .......++.+ .++|+|||++++......
T Consensus 126 fD~I~~~~~~~~~~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 126 FDVVFLDPPFHFNLAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp EEEEEECCCSSSCHHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred CCEEEECCCCCCccHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 999999987 34566778888 678999999998655433
No 40
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.63 E-value=9.3e-15 Score=119.37 Aligned_cols=120 Identities=20% Similarity=0.305 Sum_probs=100.3
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
.........+...+...++.+|||+|||+|..+..+++.. .+|+++|+++.+++.++++++..+..++++++++|+.
T Consensus 16 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 92 (192)
T 1l3i_A 16 PTAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAP 92 (192)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHH
T ss_pred CChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHH
Confidence 3445555555555666778899999999999999999864 6999999999999999999999888667999999987
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+.++. .++||+|+++....+...+++.+.++|+|||.+++...
T Consensus 93 ~~~~~------~~~~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 93 EALCK------IPDIDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HHHTT------SCCEEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred Hhccc------CCCCCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 64432 25899999998777788999999999999999998654
No 41
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.62 E-value=2.1e-15 Score=125.89 Aligned_cols=106 Identities=19% Similarity=0.236 Sum_probs=90.7
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
.+|||||||+|..+..+++. + +.+++++|+++.+++.|+++++..++.++++++++|+.+.. + .+++||+|+
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~--~----~~~~~D~v~ 116 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-S-DFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIP--I----EDNYADLIV 116 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-S-EEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCS--S----CTTCEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHc-C-CCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCC--C----CcccccEEE
Confidence 39999999999999999988 3 67999999999999999999999998888999999997632 1 157899999
Q ss_pred EeCC---ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 201 VDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 201 id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
+... ..+...+++.+.++|+|||.+++.+.....
T Consensus 117 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 153 (219)
T 3dlc_A 117 SRGSVFFWEDVATAFREIYRILKSGGKTYIGGGFGNK 153 (219)
T ss_dssp EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEECCSSH
T ss_pred ECchHhhccCHHHHHHHHHHhCCCCCEEEEEeccCcH
Confidence 9865 345678999999999999999998765444
No 42
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.62 E-value=2.9e-15 Score=134.51 Aligned_cols=113 Identities=21% Similarity=0.373 Sum_probs=91.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh--CC-CCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
..+++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ ..+++++++|+.+.++.. .++
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~-~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~----~~~ 193 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHAS-IEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNA----AEG 193 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTS----CTT
T ss_pred CCCCEEEEECCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhc----cCC
Confidence 4678999999999999999998654 679999999999999999998753 44 357999999998776532 136
Q ss_pred cEEEEEEeCCc-----cc--hHHHHHHHHccCCCCcEEEEe-CCCCCCc
Q 023645 195 SYDFAFVDAEK-----RM--YQEYFELLLQLIRVGGIIVID-NVLWHGK 235 (279)
Q Consensus 195 ~fDlI~id~~~-----~~--~~~~l~~~~~~Lk~gG~lv~d-d~~~~g~ 235 (279)
+||+|++|... .. ...+++.+.++|+|||+++++ +..|.+.
T Consensus 194 ~fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~ 242 (334)
T 1xj5_A 194 SYDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQAESLWLHM 242 (334)
T ss_dssp CEEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEECCCTTTCH
T ss_pred CccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEecCCccccH
Confidence 89999998641 11 478999999999999999997 5666653
No 43
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.62 E-value=9.4e-15 Score=130.24 Aligned_cols=125 Identities=17% Similarity=0.212 Sum_probs=102.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
.+......++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.++++++..|+.+ ++++++|+.
T Consensus 101 ~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~-v~~~~~D~~ 179 (315)
T 1ixk_A 101 YIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLN-VILFHSSSL 179 (315)
T ss_dssp EECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCS-EEEESSCGG
T ss_pred EEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCe-EEEEECChh
Confidence 4455556666667777788899999999999999999988656899999999999999999999999864 999999997
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCccc-------------------------hHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKRM-------------------------YQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~~-------------------------~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
+... . .++||+|++|++... ...+++.+.++|||||.+++..+...
T Consensus 180 ~~~~-~-----~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs~~ 250 (315)
T 1ixk_A 180 HIGE-L-----NVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCSLE 250 (315)
T ss_dssp GGGG-G-----CCCEEEEEEECCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred hccc-c-----cccCCEEEEeCCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCCCC
Confidence 6532 2 468999999865210 14788899999999999999776543
No 44
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.62 E-value=7.7e-15 Score=136.77 Aligned_cols=123 Identities=17% Similarity=0.260 Sum_probs=101.3
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH
Q 023645 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 104 ~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (279)
......++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.+++++++.|+. ++++++|+.+.
T Consensus 86 Qd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~--v~~~~~Da~~l 163 (464)
T 3m6w_A 86 QEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP--LAVTQAPPRAL 163 (464)
T ss_dssp CCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC--CEEECSCHHHH
T ss_pred ECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe--EEEEECCHHHh
Confidence 3334455556666677889999999999999999999876689999999999999999999999986 99999999876
Q ss_pred HHHHHhCCCCCcEEEEEEeCCcc-------------------------chHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 184 LKALILNGEASSYDFAFVDAEKR-------------------------MYQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 184 l~~~~~~~~~~~fDlI~id~~~~-------------------------~~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
.... .++||+|++|++.. .....++.+.++|||||.|++..+.+.
T Consensus 164 ~~~~-----~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvysTCs~~ 233 (464)
T 3m6w_A 164 AEAF-----GTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKRMAEVQKALLAQASRLLGPGGVLVYSTCTFA 233 (464)
T ss_dssp HHHH-----CSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred hhhc-----cccCCEEEECCCcCCccccccChHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeccCc
Confidence 5434 57899999987621 126688889999999999999776554
No 45
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.62 E-value=3.5e-15 Score=127.60 Aligned_cols=105 Identities=20% Similarity=0.227 Sum_probs=88.5
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..++...+ +++|+++|+++++++.|+++++..++.+ ++++++|+.+..... ...++||
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~~~---~~~~~fD 143 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFP-HLHVTIVDSLNKRITFLEKLSEALQLEN-TTFCHDRAETFGQRK---DVRESYD 143 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEESCHHHHTTCT---TTTTCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEeccHHHhcccc---cccCCcc
Confidence 3678999999999999999998765 6899999999999999999999999865 999999997642100 0036899
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+|++.. ...+..+++.+.++|+|||.+++.
T Consensus 144 ~V~~~~-~~~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 144 IVTARA-VARLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp EEEEEC-CSCHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEEec-cCCHHHHHHHHHHhcCCCCEEEEE
Confidence 999987 456788999999999999999884
No 46
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.62 E-value=8.5e-15 Score=121.85 Aligned_cols=103 Identities=11% Similarity=0.201 Sum_probs=89.8
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++...+..+ ++++++|+.+.. .++||
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~--------~~~fD 127 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKL-G-AKSVLATDISDESMTAAEENAALNGIYD-IALQKTSLLADV--------DGKFD 127 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCCC-CEEEESSTTTTC--------CSCEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCc-eEEEeccccccC--------CCCce
Confidence 35679999999999999998874 3 4699999999999999999999988876 999999997532 57899
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+|+++...+....+++.+.++|+|||.+++.++.
T Consensus 128 ~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 161 (205)
T 3grz_A 128 LIVANILAEILLDLIPQLDSHLNEDGQVIFSGID 161 (205)
T ss_dssp EEEEESCHHHHHHHGGGSGGGEEEEEEEEEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHhcCCCCEEEEEecC
Confidence 9999988777888899999999999999996544
No 47
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.62 E-value=3.4e-15 Score=124.53 Aligned_cols=104 Identities=14% Similarity=0.157 Sum_probs=85.7
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||+|||+|..++.++... ..+|+++|+++.+++.|+++++..++ ++++++++|+.+.++.. .++||+
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~--~~~V~~vD~s~~~l~~a~~~~~~~~~-~~v~~~~~D~~~~~~~~-----~~~fD~ 125 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRY--AAGATLIEMDRAVSQQLIKNLATLKA-GNARVVNSNAMSFLAQK-----GTPHNI 125 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTT--CSEEEEECSCHHHHHHHHHHHHHTTC-CSEEEECSCHHHHHSSC-----CCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcC--CCEEEEEECCHHHHHHHHHHHHHcCC-CcEEEEECCHHHHHhhc-----CCCCCE
Confidence 67899999999999999877653 25999999999999999999999888 56999999998755421 468999
Q ss_pred EEEeCC--ccchHHHHHHHHc--cCCCCcEEEEeCC
Q 023645 199 AFVDAE--KRMYQEYFELLLQ--LIRVGGIIVIDNV 230 (279)
Q Consensus 199 I~id~~--~~~~~~~l~~~~~--~Lk~gG~lv~dd~ 230 (279)
|+++.+ .......++.+.+ +|+|||++++...
T Consensus 126 V~~~~p~~~~~~~~~l~~l~~~~~L~pgG~l~i~~~ 161 (202)
T 2fpo_A 126 VFVDPPFRRGLLEETINLLEDNGWLADEALIYVESE 161 (202)
T ss_dssp EEECCSSSTTTHHHHHHHHHHTTCEEEEEEEEEEEE
T ss_pred EEECCCCCCCcHHHHHHHHHhcCccCCCcEEEEEEC
Confidence 999977 3455667777754 5999999998654
No 48
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.62 E-value=5.6e-15 Score=130.45 Aligned_cols=107 Identities=7% Similarity=0.091 Sum_probs=93.0
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++..+ .+|+++|+++++++.|++++...++.++++++++|+.+. +++|
T Consensus 70 ~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~~f 138 (302)
T 3hem_A 70 LEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---------DEPV 138 (302)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---------CCCC
T ss_pred CCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---------CCCc
Confidence 35677999999999999999999864 799999999999999999999999988899999999754 4789
Q ss_pred EEEEEeCCc------------cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 197 DFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 197 DlI~id~~~------------~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
|+|++.... ..+..+++.+.++|||||.+++.++....
T Consensus 139 D~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 139 DRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp SEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred cEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 999987543 33478999999999999999998876554
No 49
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.62 E-value=5.2e-15 Score=128.02 Aligned_cols=114 Identities=15% Similarity=0.148 Sum_probs=94.7
Q ss_pred HHHHHHHHhhc-CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHH
Q 023645 108 AQLLAMLVQIL-GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 186 (279)
Q Consensus 108 ~~~l~~l~~~~-~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~ 186 (279)
+.++..++... ++.+|||+|||+|..++.+++..+ .+|+++|+++.+++.|+++++..++.++++++++|+.+....
T Consensus 37 ~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~--~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~ 114 (259)
T 3lpm_A 37 AVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRTK--AKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDL 114 (259)
T ss_dssp HHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTCC--CEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGT
T ss_pred HHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhcC--CcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhh
Confidence 44566666666 788999999999999999998754 499999999999999999999999988899999999876432
Q ss_pred HHhCCCCCcEEEEEEeCCc-----------------------cchHHHHHHHHccCCCCcEEEE
Q 023645 187 LILNGEASSYDFAFVDAEK-----------------------RMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 187 ~~~~~~~~~fDlI~id~~~-----------------------~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+ ..++||+|+++.+. .....+++.+.++|+|||.+++
T Consensus 115 ~----~~~~fD~Ii~npPy~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 174 (259)
T 3lpm_A 115 I----PKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANF 174 (259)
T ss_dssp S----CTTCEEEEEECCCC-----------------------HHHHHHHHHHHHHEEEEEEEEE
T ss_pred h----ccCCccEEEECCCCCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEE
Confidence 2 14789999997652 1235688999999999999998
No 50
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.61 E-value=4.4e-15 Score=125.54 Aligned_cols=105 Identities=18% Similarity=0.232 Sum_probs=88.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||||||+|.++..+++..| +.+|+|+|+++.+++.|+++++..++.+ ++++++|+.+.++.... +++||.
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p-~~~v~giD~s~~~l~~a~~~~~~~~l~n-v~~~~~Da~~~l~~~~~---~~~~d~ 108 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRP-EQDFLGIEVHSPGVGACLASAHEEGLSN-LRVMCHDAVEVLHKMIP---DNSLRM 108 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHTTCSS-EEEECSCHHHHHHHHSC---TTCEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCC-CCeEEEEEecHHHHHHHHHHHHHhCCCc-EEEEECCHHHHHHHHcC---CCChhe
Confidence 567999999999999999999887 6899999999999999999999988875 99999999887664321 579999
Q ss_pred EEEeCC---cc--c------hHHHHHHHHccCCCCcEEEEe
Q 023645 199 AFVDAE---KR--M------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 199 I~id~~---~~--~------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|++..+ .. . ...+++.+.++|||||++++.
T Consensus 109 v~~~~~~p~~~~~~~~rr~~~~~~l~~~~r~LkpGG~l~i~ 149 (218)
T 3dxy_A 109 VQLFFPDPWHKARHNKRRIVQVPFAELVKSKLQLGGVFHMA 149 (218)
T ss_dssp EEEESCCCCCSGGGGGGSSCSHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEeCCCCccchhhhhhhhhhHHHHHHHHHHcCCCcEEEEE
Confidence 998632 11 1 135899999999999999884
No 51
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.61 E-value=3.9e-15 Score=130.25 Aligned_cols=106 Identities=15% Similarity=0.211 Sum_probs=87.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh--CC-CCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
..+++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++... ++ .++++++.+|+.+.++.. .+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~-----~~ 147 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPS-VKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS-----EN 147 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTT-CSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC-----CS
T ss_pred CCCCEEEEECCchHHHHHHHHhCCC-CceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-----CC
Confidence 3578999999999999999987643 579999999999999999988652 34 457999999998876542 57
Q ss_pred cEEEEEEeCCccc-------hHHHHHHHHccCCCCcEEEEeC
Q 023645 195 SYDFAFVDAEKRM-------YQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 195 ~fDlI~id~~~~~-------~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+||+|++|..... ..++++.+.+.|+|||++++..
T Consensus 148 ~fD~Ii~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~~ 189 (275)
T 1iy9_A 148 QYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQT 189 (275)
T ss_dssp CEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEEC
T ss_pred CeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 8999999875321 2679999999999999999974
No 52
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.61 E-value=1.5e-14 Score=116.25 Aligned_cols=107 Identities=19% Similarity=0.171 Sum_probs=87.6
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||+|||+|..+..+++..+ +|+++|+++.+++.|+++++..++ +++++++|+.+.++..... .++||+
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~---~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~~~~~~--~~~~D~ 113 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGW---EAVLVEKDPEAVRLLKENVRRTGL--GARVVALPVEVFLPEAKAQ--GERFTV 113 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTC---EEEEECCCHHHHHHHHHHHHHHTC--CCEEECSCHHHHHHHHHHT--TCCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCC---eEEEEeCCHHHHHHHHHHHHHcCC--ceEEEeccHHHHHHhhhcc--CCceEE
Confidence 678999999999999999998743 599999999999999999998887 6999999998866544221 248999
Q ss_pred EEEeCCc-cchHHHHHHHH--ccCCCCcEEEEeCCCC
Q 023645 199 AFVDAEK-RMYQEYFELLL--QLIRVGGIIVIDNVLW 232 (279)
Q Consensus 199 I~id~~~-~~~~~~l~~~~--~~Lk~gG~lv~dd~~~ 232 (279)
|+++.+. ......++.+. ++|+|||++++.....
T Consensus 114 i~~~~~~~~~~~~~~~~~~~~~~L~~gG~~~~~~~~~ 150 (171)
T 1ws6_A 114 AFMAPPYAMDLAALFGELLASGLVEAGGLYVLQHPKD 150 (171)
T ss_dssp EEECCCTTSCTTHHHHHHHHHTCEEEEEEEEEEEETT
T ss_pred EEECCCCchhHHHHHHHHHhhcccCCCcEEEEEeCCc
Confidence 9998654 45556777777 9999999999865443
No 53
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.60 E-value=1.2e-14 Score=135.28 Aligned_cols=125 Identities=17% Similarity=0.225 Sum_probs=102.6
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
+......++..++...++.+|||+|||+|..|..++..++..++|+++|+++.+++.+++++++.|+.+ +.++++|+.+
T Consensus 89 vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~n-v~v~~~Da~~ 167 (456)
T 3m4x_A 89 SQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSN-AIVTNHAPAE 167 (456)
T ss_dssp ECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSS-EEEECCCHHH
T ss_pred EECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCc-eEEEeCCHHH
Confidence 344445566666677788899999999999999999987756899999999999999999999999974 9999999987
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCcc-------------------------chHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 183 SLKALILNGEASSYDFAFVDAEKR-------------------------MYQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~-------------------------~~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
..... .++||+|++|++.. .....++.+.++|||||.|++..+.+.
T Consensus 168 l~~~~-----~~~FD~Il~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~LkpGG~LvYsTCs~~ 238 (456)
T 3m4x_A 168 LVPHF-----SGFFDRIVVDAPCSGEGMFRKDPNAIKEWTEESPLYCQKRQQEILSSAIKMLKNKGQLIYSTCTFA 238 (456)
T ss_dssp HHHHH-----TTCEEEEEEECCCCCGGGTTTCHHHHHHCCTTHHHHHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred hhhhc-----cccCCEEEECCCCCCccccccCHHHhhhcCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEeecc
Confidence 65444 57899999997621 122678888999999999999877654
No 54
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.60 E-value=6.1e-15 Score=120.65 Aligned_cols=105 Identities=13% Similarity=0.190 Sum_probs=89.0
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCC-cEEEEEcChhhHHHHHHhCCCCC
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
...++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...++.+ +++++.+|+.+.++ .+
T Consensus 49 ~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~-------~~ 118 (194)
T 1dus_A 49 VVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVK-------DR 118 (194)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCT-------TS
T ss_pred ccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccc-------cC
Confidence 3446779999999999999999887 4799999999999999999999888765 59999999876432 46
Q ss_pred cEEEEEEeCCc----cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 195 SYDFAFVDAEK----RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 195 ~fDlI~id~~~----~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+||+|+++... .....+++.+.++|+|||.+++...
T Consensus 119 ~~D~v~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 158 (194)
T 1dus_A 119 KYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVVIQ 158 (194)
T ss_dssp CEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceEEEECCCcccchhHHHHHHHHHHHHcCCCCEEEEEEC
Confidence 89999998763 3456889999999999999998654
No 55
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.60 E-value=4.7e-14 Score=121.86 Aligned_cols=135 Identities=13% Similarity=0.174 Sum_probs=103.4
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++++.+++. +++.++|+.+.++ .++||
T Consensus 119 ~~~~~VLDiGcG~G~l~~~la~~---g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~d~~~~~~-------~~~fD 186 (254)
T 2nxc_A 119 RPGDKVLDLGTGSGVLAIAAEKL---GGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEGSLEAALP-------FGPFD 186 (254)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEESCHHHHGG-------GCCEE
T ss_pred CCCCEEEEecCCCcHHHHHHHHh---CCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEECChhhcCc-------CCCCC
Confidence 46789999999999999998875 249999999999999999999988875 8999999876432 46899
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEE-eecCCceEEE
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISM-VPIGDGMTIC 276 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~-lp~~~G~~i~ 276 (279)
+|+++...+....+++.+.++|+|||.+++..+.... ..++.+.+.+ .+|.... ...++...+.
T Consensus 187 ~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~~~~--------------~~~v~~~l~~-~Gf~~~~~~~~~~W~~l~ 251 (254)
T 2nxc_A 187 LLVANLYAELHAALAPRYREALVPGGRALLTGILKDR--------------APLVREAMAG-AGFRPLEEAAEGEWVLLA 251 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEEGGG--------------HHHHHHHHHH-TTCEEEEEEEETTEEEEE
T ss_pred EEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeeccCC--------------HHHHHHHHHH-CCCEEEEEeccCCeEEEE
Confidence 9999887777788999999999999999997654321 2334444433 4566543 3345556555
Q ss_pred EEC
Q 023645 277 QKR 279 (279)
Q Consensus 277 ~~~ 279 (279)
-||
T Consensus 252 ~~k 254 (254)
T 2nxc_A 252 YGR 254 (254)
T ss_dssp EEC
T ss_pred EEC
Confidence 443
No 56
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.59 E-value=3.3e-14 Score=124.17 Aligned_cols=122 Identities=16% Similarity=0.192 Sum_probs=98.1
Q ss_pred HHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHH
Q 023645 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALI 188 (279)
Q Consensus 109 ~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~ 188 (279)
.++..++...++.+|||+|||+|..+..+++.++..++|+++|+++.+++.++++++..|+. +++++++|+.+......
T Consensus 73 ~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 151 (274)
T 3ajd_A 73 MIPPIVLNPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVL-NTIIINADMRKYKDYLL 151 (274)
T ss_dssp GHHHHHHCCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCHHHHHHHHH
T ss_pred HHHHHHhCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCC-cEEEEeCChHhcchhhh
Confidence 34445555667889999999999999999998764589999999999999999999999986 59999999987644321
Q ss_pred hCCCCCcEEEEEEeCCc---------------------cchHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 189 LNGEASSYDFAFVDAEK---------------------RMYQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 189 ~~~~~~~fDlI~id~~~---------------------~~~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
.. .++||+|++|++. .....+++.+.++|||||.+++..+.+.
T Consensus 152 ~~--~~~fD~Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~ 215 (274)
T 3ajd_A 152 KN--EIFFDKILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSME 215 (274)
T ss_dssp HT--TCCEEEEEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCC
T ss_pred hc--cccCCEEEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCC
Confidence 11 3689999999542 2346789999999999999999776544
No 57
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.59 E-value=6.2e-15 Score=127.14 Aligned_cols=103 Identities=24% Similarity=0.355 Sum_probs=87.8
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||||||+|..++.++...+ +++|+++|+++++++.|+++++..++.+ ++++++|+.+..... ...++||+
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~l~~-v~~~~~d~~~~~~~~---~~~~~fD~ 154 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRP-ELELVLVDATRKKVAFVERAIEVLGLKG-ARALWGRAEVLAREA---GHREAYAR 154 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHTCSS-EEEEECCHHHHTTST---TTTTCEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCCc-eEEEECcHHHhhccc---ccCCCceE
Confidence 567999999999999999999876 7899999999999999999999999976 999999997653210 00378999
Q ss_pred EEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 199 AFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 199 I~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
|++.+. .....+++.+.++|+|||.+++
T Consensus 155 I~s~a~-~~~~~ll~~~~~~LkpgG~l~~ 182 (249)
T 3g89_A 155 AVARAV-APLCVLSELLLPFLEVGGAAVA 182 (249)
T ss_dssp EEEESS-CCHHHHHHHHGGGEEEEEEEEE
T ss_pred EEECCc-CCHHHHHHHHHHHcCCCeEEEE
Confidence 999765 3467889999999999999886
No 58
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.59 E-value=7.7e-15 Score=129.67 Aligned_cols=106 Identities=15% Similarity=0.324 Sum_probs=86.0
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHH--hCC-CCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AGV-SHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g~-~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
..+++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++.. .++ ..+++++++|+.+.++.. .+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-----~~ 162 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDS-VEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF-----KN 162 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTT-CSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC-----SS
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCC-CCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC-----CC
Confidence 3568999999999999999998654 57999999999999999998865 233 457999999998765432 47
Q ss_pred cEEEEEEeCCcc--------chHHHHHHHHccCCCCcEEEEeC
Q 023645 195 SYDFAFVDAEKR--------MYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 195 ~fDlI~id~~~~--------~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+||+|++|.... ...++++.+.+.|+|||++++..
T Consensus 163 ~fD~Ii~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 205 (296)
T 1inl_A 163 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAET 205 (296)
T ss_dssp CEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 899999987533 23688999999999999999963
No 59
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.59 E-value=5.3e-15 Score=128.27 Aligned_cols=119 Identities=20% Similarity=0.261 Sum_probs=95.7
Q ss_pred HHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHH---hCCCCcEEEEEcChhhHH
Q 023645 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER---AGVSHKVKIKHGLAADSL 184 (279)
Q Consensus 108 ~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~---~g~~~~v~~~~gd~~~~l 184 (279)
+.++..++...++.+|||+|||+|..++.++...+ +.+|+++|+++++++.|+++++. +++.++++++++|+.+..
T Consensus 25 ~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~~-~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~ 103 (260)
T 2ozv_A 25 AMLLASLVADDRACRIADLGAGAGAAGMAVAARLE-KAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRA 103 (260)
T ss_dssp HHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHCT-TEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCH
T ss_pred HHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHh
Confidence 34455555556678999999999999999999886 67999999999999999999998 888878999999998764
Q ss_pred HHHHhC-CCCCcEEEEEEeCCc---------------------cchHHHHHHHHccCCCCcEEEE
Q 023645 185 KALILN-GEASSYDFAFVDAEK---------------------RMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 185 ~~~~~~-~~~~~fDlI~id~~~---------------------~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+..... ...++||+|+++.+. ..+..+++.+.++|+|||.+++
T Consensus 104 ~~~~~~~~~~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~ 168 (260)
T 2ozv_A 104 KARVEAGLPDEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSL 168 (260)
T ss_dssp HHHHHTTCCTTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEE
T ss_pred hhhhhhccCCCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEE
Confidence 422111 124789999998542 1256788999999999999988
No 60
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.59 E-value=2.4e-14 Score=120.01 Aligned_cols=113 Identities=14% Similarity=0.165 Sum_probs=93.8
Q ss_pred HhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
....++.+|||+|||+|..+..+++..++..+|+++|+++.+++.+++++...++. +++++.+|+.+.. . .++
T Consensus 33 ~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~--~----~~~ 105 (219)
T 3dh0_A 33 FGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLK-NVEVLKSEENKIP--L----PDN 105 (219)
T ss_dssp HTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECBTTBCS--S----CSS
T ss_pred hCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCC-cEEEEecccccCC--C----CCC
Confidence 34556779999999999999999998744689999999999999999999988886 5999999987532 1 157
Q ss_pred cEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 195 SYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 195 ~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
+||+|++... ..+...+++.+.++|+|||.+++.+.....
T Consensus 106 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 148 (219)
T 3dh0_A 106 TVDFIFMAFTFHELSEPLKFLEELKRVAKPFAYLAIIDWKKEE 148 (219)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred CeeEEEeehhhhhcCCHHHHHHHHHHHhCCCeEEEEEEecccc
Confidence 8999999765 335678999999999999999997755443
No 61
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.59 E-value=5.8e-14 Score=113.81 Aligned_cols=114 Identities=18% Similarity=0.225 Sum_probs=94.0
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
..+.....+.......++.+|||+|||+|..+..+++ + ..+++++|+++.+++.++++++..++. +++++++|+.+
T Consensus 19 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~--~-~~~v~~vD~~~~~~~~a~~~~~~~~~~-~~~~~~~d~~~ 94 (183)
T 2yxd_A 19 TKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK--R-CKFVYAIDYLDGAIEVTKQNLAKFNIK-NCQIIKGRAED 94 (183)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT--T-SSEEEEEECSHHHHHHHHHHHHHTTCC-SEEEEESCHHH
T ss_pred CHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh--c-CCeEEEEeCCHHHHHHHHHHHHHcCCC-cEEEEECCccc
Confidence 3444445555555556778999999999999999998 3 689999999999999999999998874 59999999976
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.++ .++||+|+++.. .....+++.+.++ |||.+++...
T Consensus 95 ~~~-------~~~~D~i~~~~~-~~~~~~l~~~~~~--~gG~l~~~~~ 132 (183)
T 2yxd_A 95 VLD-------KLEFNKAFIGGT-KNIEKIIEILDKK--KINHIVANTI 132 (183)
T ss_dssp HGG-------GCCCSEEEECSC-SCHHHHHHHHHHT--TCCEEEEEES
T ss_pred ccc-------CCCCcEEEECCc-ccHHHHHHHHhhC--CCCEEEEEec
Confidence 322 368999999888 7788889998888 9999999764
No 62
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.58 E-value=4.1e-15 Score=132.15 Aligned_cols=106 Identities=8% Similarity=0.061 Sum_probs=91.6
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++.. +.+|+++|+++++++.|++++...++.++++++.+|+.+. +++||
T Consensus 89 ~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---------~~~fD 157 (318)
T 2fk8_A 89 KPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDF---------AEPVD 157 (318)
T ss_dssp CTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGC---------CCCCS
T ss_pred CCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHC---------CCCcC
Confidence 456799999999999999999875 3699999999999999999999888888899999998653 36899
Q ss_pred EEEEeCC-----ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 198 FAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 198 lI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
+|++... ..+...+++.+.++|+|||.+++.++....
T Consensus 158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 9998754 256688999999999999999998776544
No 63
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.58 E-value=1.5e-14 Score=121.59 Aligned_cols=104 Identities=16% Similarity=0.151 Sum_probs=86.5
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||||||+|..+..+++..| +.+|+|+|+++.+++.|+++++..++. +++++++|+.+....+ .+++||.
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~giD~s~~~l~~a~~~~~~~~~~-nv~~~~~d~~~l~~~~----~~~~~d~ 111 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNP-DINYIGIELFKSVIVTAVQKVKDSEAQ-NVKLLNIDADTLTDVF----EPGEVKR 111 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCT-TSEEEEECSCHHHHHHHHHHHHHSCCS-SEEEECCCGGGHHHHC----CTTSCCE
T ss_pred CCceEEEEecCCCHHHHHHHHHCC-CCCEEEEEechHHHHHHHHHHHHcCCC-CEEEEeCCHHHHHhhc----CcCCcCE
Confidence 466999999999999999999876 789999999999999999999988885 4999999998743222 1468999
Q ss_pred EEEeCCcc-----------chHHHHHHHHccCCCCcEEEEe
Q 023645 199 AFVDAEKR-----------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 199 I~id~~~~-----------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|++..+.. ....+++.+.+.|+|||.|++.
T Consensus 112 v~~~~~~p~~~~~~~~~rl~~~~~l~~~~~~LkpgG~l~~~ 152 (213)
T 2fca_A 112 VYLNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 152 (213)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred EEEECCCCCcCccccccccCcHHHHHHHHHHcCCCCEEEEE
Confidence 98864311 1467899999999999999984
No 64
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.58 E-value=6.9e-15 Score=129.82 Aligned_cols=106 Identities=15% Similarity=0.211 Sum_probs=84.5
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC---C-CCcEEEEEcChhhHHHHHHhCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG---V-SHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g---~-~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
.++++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++...+ + ..+++++.+|+.+.++.. .
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~-----~ 155 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT-----S 155 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTT-CCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC-----C
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc-----C
Confidence 4578999999999999999998644 6799999999999999999987652 2 347999999998776532 5
Q ss_pred CcEEEEEEeCCcc-------chHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKR-------MYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~-------~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
++||+|++|.... ...++++.+.+.|+|||++++..
T Consensus 156 ~~fDvIi~D~~~p~~~~~~l~~~~f~~~~~~~LkpgG~lv~~~ 198 (294)
T 3adn_A 156 QTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQN 198 (294)
T ss_dssp CCEEEEEECC----------CCHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCccEEEECCCCccCcchhccHHHHHHHHHHhcCCCCEEEEec
Confidence 7899999986522 12679999999999999999863
No 65
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.58 E-value=8.8e-15 Score=121.78 Aligned_cols=120 Identities=20% Similarity=0.268 Sum_probs=74.8
Q ss_pred CHHHHHHHHHHHhh----cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC
Q 023645 104 SPDQAQLLAMLVQI----LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (279)
Q Consensus 104 ~~~~~~~l~~l~~~----~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (279)
.+....++..+... .++.+|||+|||+|..+..+++..+ +.+++++|+++.+++.|++++...+. +++++++|
T Consensus 11 ~~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 87 (215)
T 4dzr_A 11 RPDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACP-GVSVTAVDLSMDALAVARRNAERFGA--VVDWAAAD 87 (215)
T ss_dssp CHHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCT-TEEEEEEECC---------------------CCHHH
T ss_pred CccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhCC--ceEEEEcc
Confidence 44555555555543 5677999999999999999999876 67999999999999999999988776 68999999
Q ss_pred hhhHHHHHHhCCCCCcEEEEEEeCCccc-----------------------------hHHHHHHHHccCCCCcE-EEEe
Q 023645 180 AADSLKALILNGEASSYDFAFVDAEKRM-----------------------------YQEYFELLLQLIRVGGI-IVID 228 (279)
Q Consensus 180 ~~~~l~~~~~~~~~~~fDlI~id~~~~~-----------------------------~~~~l~~~~~~Lk~gG~-lv~d 228 (279)
+.+.++..... .++||+|+++.+... +..+++.+.++|+|||+ +++.
T Consensus 88 ~~~~~~~~~~~--~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 164 (215)
T 4dzr_A 88 GIEWLIERAER--GRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLALDGGEDGLQFYRRMAALPPYVLARGRAGVFLE 164 (215)
T ss_dssp HHHHHHHHHHT--TCCBSEEEECCCCCC------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEE
T ss_pred hHhhhhhhhhc--cCcccEEEECCCCCCCccccccChhhhccCccccccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 98755431111 378999999754210 15677778899999999 6553
No 66
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.58 E-value=1.3e-14 Score=121.85 Aligned_cols=104 Identities=16% Similarity=0.189 Sum_probs=87.3
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||||||+|..+..+++..| +.+++|+|+++.+++.|++++...++ .+++++++|+.+....+ .+++||+
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~a~~~~~~~~~-~~v~~~~~d~~~~~~~~----~~~~~D~ 114 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNP-DINYIGIDIQKSVLSYALDKVLEVGV-PNIKLLWVDGSDLTDYF----EDGEIDR 114 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHHCC-SSEEEEECCSSCGGGTS----CTTCCSE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCC-CCCEEEEEcCHHHHHHHHHHHHHcCC-CCEEEEeCCHHHHHhhc----CCCCCCE
Confidence 467999999999999999999987 78999999999999999999999888 46999999997632111 1468999
Q ss_pred EEEeCCcc-----------chHHHHHHHHccCCCCcEEEEe
Q 023645 199 AFVDAEKR-----------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 199 I~id~~~~-----------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|+++.+.. .+..+++.+.++|+|||++++.
T Consensus 115 i~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 155 (214)
T 1yzh_A 115 LYLNFSDPWPKKRHEKRRLTYKTFLDTFKRILPENGEIHFK 155 (214)
T ss_dssp EEEESCCCCCSGGGGGGSTTSHHHHHHHHHHSCTTCEEEEE
T ss_pred EEEECCCCccccchhhhccCCHHHHHHHHHHcCCCcEEEEE
Confidence 99986522 2367999999999999999884
No 67
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.58 E-value=2.4e-14 Score=124.90 Aligned_cols=117 Identities=16% Similarity=0.239 Sum_probs=96.8
Q ss_pred CCHHHHHHHHHHHhh--cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh
Q 023645 103 VSPDQAQLLAMLVQI--LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~--~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (279)
..++...++..++.. .++.+|||+|||+|..+..++...+ +.+|+++|+++.+++.|+++++..++. +++++++|+
T Consensus 91 pr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~n~~~~~~~-~v~~~~~d~ 168 (276)
T 2b3t_A 91 PRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASERP-DCEIIAVDRMPDAVSLAQRNAQHLAIK-NIHILQSDW 168 (276)
T ss_dssp CCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHCT-TSEEEEECSSHHHHHHHHHHHHHHTCC-SEEEECCST
T ss_pred cCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-ceEEEEcch
Confidence 355666666666655 4567999999999999999998876 689999999999999999999998886 599999999
Q ss_pred hhHHHHHHhCCCCCcEEEEEEeCCc----------------------------cchHHHHHHHHccCCCCcEEEEe
Q 023645 181 ADSLKALILNGEASSYDFAFVDAEK----------------------------RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 181 ~~~l~~~~~~~~~~~fDlI~id~~~----------------------------~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.+.++ .++||+|+++.+. ..+..+++.+.++|+|||++++.
T Consensus 169 ~~~~~-------~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~~~g~~~~~~~l~~~~~~LkpgG~l~~~ 237 (276)
T 2b3t_A 169 FSALA-------GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAADSGMADIVHIIEQSRNALVSGGFLLLE 237 (276)
T ss_dssp TGGGT-------TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCHHHHTHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred hhhcc-------cCCccEEEECCCCCCccccccChhhhhcCcHHHHcCCCcHHHHHHHHHHHHHHhcCCCCEEEEE
Confidence 76532 4689999998542 23467788899999999999996
No 68
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.57 E-value=1.4e-14 Score=125.72 Aligned_cols=110 Identities=16% Similarity=0.214 Sum_probs=93.2
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++.. +++|+++|+++.+++.+++++...++.++++++.+|+.+.. . .+++|
T Consensus 59 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~-----~~~~f 130 (273)
T 3bus_A 59 VRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLP-F-----EDASF 130 (273)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-S-----CTTCE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCC-C-----CCCCc
Confidence 3467899999999999999999875 47999999999999999999999998888999999997531 1 14789
Q ss_pred EEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 197 DFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 197 DlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
|+|++... ..+...+++.+.++|||||.+++.+....+
T Consensus 131 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~~~ 171 (273)
T 3bus_A 131 DAVWALESLHHMPDRGRALREMARVLRPGGTVAIADFVLLA 171 (273)
T ss_dssp EEEEEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEEEESS
T ss_pred cEEEEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEeeccC
Confidence 99998754 345678999999999999999998876543
No 69
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.57 E-value=1.3e-14 Score=121.05 Aligned_cols=113 Identities=20% Similarity=0.310 Sum_probs=93.4
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
..+.....+...+...++.+|||||||+|..+..+++. +++|+++|+++++++.|+++++..+.. +++++++|+.+
T Consensus 61 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~-~v~~~~~d~~~ 136 (210)
T 3lbf_A 61 SQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLH-NVSTRHGDGWQ 136 (210)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEESCGGG
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCC-ceEEEECCccc
Confidence 35666666666667778889999999999999999987 479999999999999999999998886 59999999976
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
..+. .++||+|+++....... +.+.++|+|||.+++.
T Consensus 137 ~~~~------~~~~D~i~~~~~~~~~~---~~~~~~L~pgG~lv~~ 173 (210)
T 3lbf_A 137 GWQA------RAPFDAIIVTAAPPEIP---TALMTQLDEGGILVLP 173 (210)
T ss_dssp CCGG------GCCEEEEEESSBCSSCC---THHHHTEEEEEEEEEE
T ss_pred CCcc------CCCccEEEEccchhhhh---HHHHHhcccCcEEEEE
Confidence 4332 47899999987654433 3678999999999985
No 70
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.57 E-value=8.7e-15 Score=128.22 Aligned_cols=109 Identities=18% Similarity=0.281 Sum_probs=92.4
Q ss_pred HhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
....++.+|||||||+|.++..+++.++.+.+|+++|+++.+++.|++++...+. +++++++|+.+... ++
T Consensus 18 ~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~-------~~ 88 (284)
T 3gu3_A 18 WKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY--DSEFLEGDATEIEL-------ND 88 (284)
T ss_dssp SCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS--EEEEEESCTTTCCC-------SS
T ss_pred hccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcchhhcCc-------CC
Confidence 3455788999999999999999999887568999999999999999999987654 69999999976321 46
Q ss_pred cEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 195 SYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 195 ~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
+||+|++... ..+...+++.+.++|+|||.+++.+..|
T Consensus 89 ~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 129 (284)
T 3gu3_A 89 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFEPHW 129 (284)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEECCH
T ss_pred CeeEEEECChhhcCCCHHHHHHHHHHHcCCCCEEEEEecch
Confidence 8999999865 3456789999999999999999887764
No 71
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.57 E-value=2.7e-14 Score=120.78 Aligned_cols=136 Identities=15% Similarity=0.173 Sum_probs=99.8
Q ss_pred hcCCCEEEEEcCc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 117 ILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 117 ~~~~~~VLEiG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
..++.+|||+||| +|..+..+++.. +.+|+++|+++.+++.|+++++..++ +++++++|+....+ + .+++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~-~----~~~~ 123 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS--NVRLVKSNGGIIKG-V----VEGT 123 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC--CCEEEECSSCSSTT-T----CCSC
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC--CcEEEeCCchhhhh-c----ccCc
Confidence 4567899999999 999999999875 47999999999999999999999888 59999999632211 1 1478
Q ss_pred EEEEEEeCCcc----------------------chHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHH
Q 023645 196 YDFAFVDAEKR----------------------MYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFN 253 (279)
Q Consensus 196 fDlI~id~~~~----------------------~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~ 253 (279)
||+|+++.+.. .+..+++.+.++|+|||.+++--. .+. ....++.
T Consensus 124 fD~I~~npp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~--~~~-----------~~~~~~~ 190 (230)
T 3evz_A 124 FDVIFSAPPYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP--DKE-----------KLLNVIK 190 (230)
T ss_dssp EEEEEECCCCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE--SCH-----------HHHHHHH
T ss_pred eeEEEECCCCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec--ccH-----------hHHHHHH
Confidence 99999985521 146789999999999999998311 110 1234444
Q ss_pred HHhhhCCCeEEEEeecCCceEE
Q 023645 254 KNLMEDERVSISMVPIGDGMTI 275 (279)
Q Consensus 254 ~~l~~~~~~~~~~lp~~~G~~i 275 (279)
+.+. +.++....+.+..|..+
T Consensus 191 ~~l~-~~g~~~~~~~~~~g~~~ 211 (230)
T 3evz_A 191 ERGI-KLGYSVKDIKFKVGTRW 211 (230)
T ss_dssp HHHH-HTTCEEEEEEECCCC-C
T ss_pred HHHH-HcCCceEEEEecCCCeE
Confidence 4443 34567777777666543
No 72
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.57 E-value=1.7e-14 Score=128.87 Aligned_cols=106 Identities=21% Similarity=0.346 Sum_probs=87.4
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHH--hCC-CCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER--AGV-SHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g~-~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
..+++|||||||+|..+..+++..+ ..+|+++|+++++++.|++++.. .++ ..+++++++|+.+.++.. ++
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-----~~ 188 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-----TN 188 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-----CS
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc-----CC
Confidence 4578999999999999999997644 67999999999999999998865 233 457999999998876543 57
Q ss_pred cEEEEEEeCCc-----cc-h-HHHHHHHHccCCCCcEEEEeC
Q 023645 195 SYDFAFVDAEK-----RM-Y-QEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 195 ~fDlI~id~~~-----~~-~-~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+||+|++|... .. + .++++.+.+.|+|||++++..
T Consensus 189 ~fDvIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 230 (321)
T 2pt6_A 189 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 230 (321)
T ss_dssp CEEEEEEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEEE
T ss_pred CceEEEECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEc
Confidence 89999998731 11 2 689999999999999999963
No 73
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.56 E-value=9.7e-15 Score=128.65 Aligned_cols=115 Identities=18% Similarity=0.303 Sum_probs=88.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCC---------------------------
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS--------------------------- 170 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~--------------------------- 170 (279)
.++++|||||||+|..+..+++.++ ..+|+|+|+++.+++.|++++...+..
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKR 123 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC---------------------------------
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccc
Confidence 3578999999999999999999986 579999999999999999987655422
Q ss_pred ------------------------------CcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCc---c------chHHH
Q 023645 171 ------------------------------HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK---R------MYQEY 211 (279)
Q Consensus 171 ------------------------------~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~---~------~~~~~ 211 (279)
++++|+++|+.+....+.. ...++||+|++.... + ....+
T Consensus 124 ~~~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~-~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~ 202 (292)
T 3g07_A 124 SCFPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVE-AQTPEYDVVLCLSLTKWVHLNWGDEGLKRM 202 (292)
T ss_dssp ------------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHT-TCCCCEEEEEEESCHHHHHHHHHHHHHHHH
T ss_pred ccccchhhhccCccccccccccccccccccccceEEecccccCcccccc-ccCCCcCEEEEChHHHHhhhcCCHHHHHHH
Confidence 5799999998743222211 125799999998753 2 56678
Q ss_pred HHHHHccCCCCcEEEEeCCCCCC
Q 023645 212 FELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 212 l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
++.+.++|+|||+|++...-|..
T Consensus 203 l~~~~~~LkpGG~lil~~~~~~~ 225 (292)
T 3g07_A 203 FRRIYRHLRPGGILVLEPQPWSS 225 (292)
T ss_dssp HHHHHHHEEEEEEEEEECCCHHH
T ss_pred HHHHHHHhCCCcEEEEecCCchh
Confidence 99999999999999998766653
No 74
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.56 E-value=1.5e-13 Score=123.31 Aligned_cols=109 Identities=15% Similarity=0.170 Sum_probs=90.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCC-cEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
++.+|||+|||+|..++.++.. +.+|+++|+|+.+++.|+++++.+++.+ +++++++|+.+.++..... .++||
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~---ga~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~--~~~fD 227 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAA---GAEVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERR--GSTYD 227 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHH--TCCBS
T ss_pred CCCcEEEcccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhc--CCCce
Confidence 5679999999999999999985 3599999999999999999999999876 5999999998876543211 36899
Q ss_pred EEEEeCCc-------------cchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 198 FAFVDAEK-------------RMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 198 lI~id~~~-------------~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
+|++|.+. ..+..+++.+.++|+|||++++.....
T Consensus 228 ~Ii~dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 228 IILTDPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp EEEECCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred EEEECCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 99998762 135678888999999999988766543
No 75
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.56 E-value=2.3e-14 Score=119.17 Aligned_cols=100 Identities=11% Similarity=0.153 Sum_probs=87.8
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||+|||+|..+..++...+ +.+++++|+++.+++.+++++...++.+ ++++++|+.+..+ .++||+
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~~~-------~~~~D~ 135 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRP-EAHFTLLDSLGKRVRFLRQVQHELKLEN-IEPVQSRVEEFPS-------EPPFDG 135 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCSS-EEEEECCTTTSCC-------CSCEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEecchhhCCc-------cCCcCE
Confidence 478999999999999999999876 6899999999999999999999988876 9999999976431 468999
Q ss_pred EEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 199 AFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 199 I~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|++.. ...+..+++.+.++|+|||.+++.
T Consensus 136 i~~~~-~~~~~~~l~~~~~~L~~gG~l~~~ 164 (207)
T 1jsx_A 136 VISRA-FASLNDMVSWCHHLPGEQGRFYAL 164 (207)
T ss_dssp EECSC-SSSHHHHHHHHTTSEEEEEEEEEE
T ss_pred EEEec-cCCHHHHHHHHHHhcCCCcEEEEE
Confidence 99765 456778999999999999999985
No 76
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.56 E-value=3.6e-14 Score=123.87 Aligned_cols=119 Identities=21% Similarity=0.310 Sum_probs=99.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
.+.+.....+...+...++.+|||+|||+|..+..+++.+.+.++|+++|+++.+++.|+++++..++.++++++.+|+.
T Consensus 95 ~~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 174 (277)
T 1o54_A 95 IVYPKDSSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS 174 (277)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGG
T ss_pred ccCHHHHHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHH
Confidence 34555556666666777888999999999999999999865478999999999999999999999888677999999997
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+.++ +++||+|+++.+ ....+++.+.+.|+|||.+++..
T Consensus 175 ~~~~-------~~~~D~V~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 213 (277)
T 1o54_A 175 EGFD-------EKDVDALFLDVP--DPWNYIDKCWEALKGGGRFATVC 213 (277)
T ss_dssp GCCS-------CCSEEEEEECCS--CGGGTHHHHHHHEEEEEEEEEEE
T ss_pred Hccc-------CCccCEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 6522 468999999764 33477889999999999999864
No 77
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.56 E-value=5.2e-14 Score=123.07 Aligned_cols=107 Identities=9% Similarity=0.076 Sum_probs=91.1
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++..+ .+|+++|+++++++.+++++...++..+++++.+|+.+. .++|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~---------~~~f 130 (287)
T 1kpg_A 62 LQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQF---------DEPV 130 (287)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGC---------CCCC
T ss_pred CCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhC---------CCCe
Confidence 34567999999999999999996654 599999999999999999999888887899999998643 3789
Q ss_pred EEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 197 DFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 197 DlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
|+|++.... .+...+++.+.++|||||.+++.++....
T Consensus 131 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 173 (287)
T 1kpg_A 131 DRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTITGLH 173 (287)
T ss_dssp SEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEEECC
T ss_pred eEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEecCCC
Confidence 999987542 45678999999999999999998876543
No 78
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.56 E-value=5.4e-14 Score=123.54 Aligned_cols=117 Identities=16% Similarity=0.392 Sum_probs=94.8
Q ss_pred CCCHHHHHHHHHHHhh---cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc
Q 023645 102 QVSPDQAQLLAMLVQI---LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 178 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~---~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g 178 (279)
...++...++..+... .++.+|||+|||+|..++.++.. + +.+|+++|+|+++++.|+++++..++.++++++++
T Consensus 103 ipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~-~-~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~ 180 (284)
T 1nv8_A 103 VPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF-S-DAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKG 180 (284)
T ss_dssp CCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH-S-SCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEES
T ss_pred ecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 3455556666555443 35679999999999999999998 5 78999999999999999999999999888999999
Q ss_pred ChhhHHHHHHhCCCCCcE---EEEEEeCCccc----------------------hHHHHHHHH-ccCCCCcEEEEe
Q 023645 179 LAADSLKALILNGEASSY---DFAFVDAEKRM----------------------YQEYFELLL-QLIRVGGIIVID 228 (279)
Q Consensus 179 d~~~~l~~~~~~~~~~~f---DlI~id~~~~~----------------------~~~~l~~~~-~~Lk~gG~lv~d 228 (279)
|+.+.++ ++| |+|+++++... -..+++.+. +.|+|||++++.
T Consensus 181 D~~~~~~--------~~f~~~D~IvsnPPyi~~~~~l~~~v~~ep~~al~~~~dgl~~~~~i~~~~l~pgG~l~~e 248 (284)
T 1nv8_A 181 EFLEPFK--------EKFASIEMILSNPPYVKSSAHLPKDVLFEPPEALFGGEDGLDFYREFFGRYDTSGKIVLME 248 (284)
T ss_dssp STTGGGG--------GGTTTCCEEEECCCCBCGGGSCTTSCCCSCHHHHBCTTTSCHHHHHHHHHCCCTTCEEEEE
T ss_pred cchhhcc--------cccCCCCEEEEcCCCCCcccccChhhccCcHHHhcCCCcHHHHHHHHHHhcCCCCCEEEEE
Confidence 9987432 467 99999854221 126789999 999999999984
No 79
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.55 E-value=1.7e-14 Score=125.94 Aligned_cols=111 Identities=10% Similarity=0.091 Sum_probs=93.5
Q ss_pred HHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhC
Q 023645 111 LAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN 190 (279)
Q Consensus 111 l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~ 190 (279)
+..+....++.+|||+|||+|.+++.+++..+ .++|+++|+++.+++.|+++++.+++.+ ++++++|+.+. +.
T Consensus 111 ~~~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~-~~~~~~d~~~~-~~---- 183 (272)
T 3a27_A 111 KRMAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNN-VIPILADNRDV-EL---- 183 (272)
T ss_dssp HHHHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSS-EEEEESCGGGC-CC----
T ss_pred HHHHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCC-EEEEECChHHc-Cc----
Confidence 33344455678999999999999999999875 6799999999999999999999998865 88999999875 32
Q ss_pred CCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 191 GEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 191 ~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
.++||+|++|.+. ....++..+.+.|+|||++++....
T Consensus 184 --~~~~D~Vi~d~p~-~~~~~l~~~~~~LkpgG~l~~s~~~ 221 (272)
T 3a27_A 184 --KDVADRVIMGYVH-KTHKFLDKTFEFLKDRGVIHYHETV 221 (272)
T ss_dssp --TTCEEEEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEE
T ss_pred --cCCceEEEECCcc-cHHHHHHHHHHHcCCCCEEEEEEcC
Confidence 3689999999875 5667889999999999999986554
No 80
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.55 E-value=3.3e-14 Score=124.45 Aligned_cols=105 Identities=16% Similarity=0.099 Sum_probs=90.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|.+++.+++..+ .+|+++|+++.+++.|+++++.+++.++++++++|+.+... .++||
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~--~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~-------~~~fD 194 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGK--AKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-------ENIAD 194 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTC--CEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------CSCEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc-------cCCcc
Confidence 3478999999999999999999854 28999999999999999999999998889999999987643 47899
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
+|+++.+. ....+++.+.++|+|||++++.....
T Consensus 195 ~Vi~~~p~-~~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 195 RILMGYVV-RTHEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp EEEECCCS-SGGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEEECCch-hHHHHHHHHHHHCCCCeEEEEEEeec
Confidence 99998763 33578889999999999999976654
No 81
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.55 E-value=1.7e-14 Score=120.32 Aligned_cols=116 Identities=13% Similarity=0.002 Sum_probs=84.8
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC-----------CCC
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG-----------VSH 171 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g-----------~~~ 171 (279)
+++...+++..+ ...++.+|||+|||+|..+.++++. +.+|+|+|+|+.+++.|++...... ...
T Consensus 7 ~~~~l~~~~~~l-~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~ 82 (203)
T 1pjz_A 7 VNKDLQQYWSSL-NVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAP 82 (203)
T ss_dssp STHHHHHHHHHH-CCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECS
T ss_pred CCHHHHHHHHhc-ccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCC
Confidence 345454554433 2346789999999999999999986 4699999999999999998754210 124
Q ss_pred cEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCc-----cchHHHHHHHHccCCCCcEEEE
Q 023645 172 KVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 172 ~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+++++++|+.+..... .++||+|++.... .....+++++.++|||||.+++
T Consensus 83 ~v~~~~~d~~~l~~~~-----~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l 138 (203)
T 1pjz_A 83 GIEIWCGDFFALTARD-----IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLL 138 (203)
T ss_dssp SSEEEEECCSSSTHHH-----HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEE
T ss_pred ccEEEECccccCCccc-----CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEE
Confidence 6999999997653221 1689999975442 2345689999999999998443
No 82
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.55 E-value=4.1e-14 Score=131.99 Aligned_cols=126 Identities=16% Similarity=0.230 Sum_probs=100.2
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
+......++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..|+. +++++++|+.+
T Consensus 243 ~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~-~v~~~~~D~~~ 321 (450)
T 2yxl_A 243 VQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIK-IVKPLVKDARK 321 (450)
T ss_dssp ECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCC-SEEEECSCTTC
T ss_pred ecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCC-cEEEEEcChhh
Confidence 33445556666667778889999999999999999998874489999999999999999999999986 49999999875
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCccc-------------------------hHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 183 SLKALILNGEASSYDFAFVDAEKRM-------------------------YQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~~-------------------------~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
..+.+ .+++||+|++|++... ...+++.+.++|||||.+++..+.+.
T Consensus 322 ~~~~~----~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~lvy~tcs~~ 393 (450)
T 2yxl_A 322 APEII----GEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINEMSQLQRELLESAARLVKPGGRLLYTTCSIF 393 (450)
T ss_dssp CSSSS----CSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHHHHHHHHHHHHHHHTTEEEEEEEEEEESCCC
T ss_pred cchhh----ccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 42211 1268999999865211 15678999999999999998776554
No 83
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.55 E-value=2.2e-14 Score=126.03 Aligned_cols=111 Identities=14% Similarity=0.228 Sum_probs=93.4
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
...++.+|||||||+|..+..+++.. +.+|+++|+++.+++.|+++....++.++++++++|+.+.. . .+++
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~-~-----~~~~ 150 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP-C-----EDNS 150 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS-S-----CTTC
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC-C-----CCCC
Confidence 44567899999999999999999875 36999999999999999999999999888999999997531 1 1578
Q ss_pred EEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 196 YDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 196 fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
||+|++... ..+...+++.+.++|||||.+++.+.....
T Consensus 151 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 192 (297)
T 2o57_A 151 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKED 192 (297)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEeccCC
Confidence 999998755 334678999999999999999998766543
No 84
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.55 E-value=5.7e-14 Score=120.64 Aligned_cols=119 Identities=18% Similarity=0.217 Sum_probs=96.9
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh-CCCCcEEEEEcC
Q 023645 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-GVSHKVKIKHGL 179 (279)
Q Consensus 101 ~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g~~~~v~~~~gd 179 (279)
..+.+.....+...+...++.+|||+|||+|..+..+++.+.+.++|+++|+++.+++.|+++++.. | .++++++++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g-~~~v~~~~~d 156 (258)
T 2pwy_A 78 TPTYPKDASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQ-VENVRFHLGK 156 (258)
T ss_dssp CCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCC-CCCEEEEESC
T ss_pred ccccchHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcC-CCCEEEEECc
Confidence 3445555555666666778889999999999999999998544689999999999999999999987 7 4569999999
Q ss_pred hhhH-HHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 180 AADS-LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 180 ~~~~-l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+.+. ++ +++||+|+++.. ....+++.+.++|+|||.+++..
T Consensus 157 ~~~~~~~-------~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 198 (258)
T 2pwy_A 157 LEEAELE-------EAAYDGVALDLM--EPWKVLEKAALALKPDRFLVAYL 198 (258)
T ss_dssp GGGCCCC-------TTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred hhhcCCC-------CCCcCEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 9764 21 468999999764 33477899999999999999854
No 85
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.55 E-value=1.4e-13 Score=127.69 Aligned_cols=158 Identities=18% Similarity=0.240 Sum_probs=118.9
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
+......++..++...++.+|||+|||+|..+..+++..+ +++|+++|+++.+++.++++++..|+. ++++++|+.+
T Consensus 230 ~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~-~~~v~a~D~~~~~l~~~~~~~~~~g~~--~~~~~~D~~~ 306 (429)
T 1sqg_A 230 VQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAP-EAQVVAVDIDEQRLSRVYDNLKRLGMK--ATVKQGDGRY 306 (429)
T ss_dssp ECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCT-TCEEEEEESSTTTHHHHHHHHHHTTCC--CEEEECCTTC
T ss_pred eeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHHcCCC--eEEEeCchhh
Confidence 4455666667777777888999999999999999999887 489999999999999999999998874 7899999976
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCccc-------------------------hHHHHHHHHccCCCCcEEEEeCCCCCCccc
Q 023645 183 SLKALILNGEASSYDFAFVDAEKRM-------------------------YQEYFELLLQLIRVGGIIVIDNVLWHGKVA 237 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~~-------------------------~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~ 237 (279)
..+.+. .++||+|++|++... +..+++.+.++|||||.+++..+.+.....
T Consensus 307 ~~~~~~----~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~~l~~~q~~~L~~a~~~LkpGG~lvystcs~~~~en 382 (429)
T 1sqg_A 307 PSQWCG----EQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCSVLPEEN 382 (429)
T ss_dssp THHHHT----TCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESCCCGGGT
T ss_pred chhhcc----cCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECCCChhhH
Confidence 644331 368999999875211 146788899999999999998776543311
Q ss_pred CcccCChhhHHHHHHHHHhhhCCCeEE-----------EEeec---CCceEEEEE
Q 023645 238 DQMVNDAKTISIRNFNKNLMEDERVSI-----------SMVPI---GDGMTICQK 278 (279)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~l~~~~~~~~-----------~~lp~---~~G~~i~~~ 278 (279)
...+..| +...++++. .++|- +||+-+|+.
T Consensus 383 --------e~~v~~~---l~~~~~~~~~~~~~~~~~~~~~~P~~~~~dGff~a~l 426 (429)
T 1sqg_A 383 --------SLQIKAF---LQRTADAELCETGTPEQPGKQNLPGAEEGDGFFYAKL 426 (429)
T ss_dssp --------HHHHHHH---HHHCTTCEECSSBCSSSBSEEECCCTTSCCSEEEEEE
T ss_pred --------HHHHHHH---HHhCCCCEEeCCCCCCCCeEEECCCCCCCCceEEEEE
Confidence 1123334 445665543 45663 589999875
No 86
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.55 E-value=1.2e-14 Score=123.72 Aligned_cols=106 Identities=18% Similarity=0.196 Sum_probs=83.0
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|+++.+..+ .+++++++|+.+.++.+ .+++||
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~--~~v~~~~~d~~~~~~~~----~~~~fD 130 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQT--HKVIPLKGLWEDVAPTL----PDGHFD 130 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSC--EEEEEEEECCHHHHHHHHHHGGGCS--SEEEEEESCHHHHGGGS----CTTCEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcC--CCeEEEEcCCHHHHHHHHHHHHhcC--CCeEEEecCHHHhhccc----CCCceE
Confidence 356799999999999999997643 2489999999999999999887655 46999999997653222 257899
Q ss_pred EEEEeCC--------ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 198 FAFVDAE--------KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 198 lI~id~~--------~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+|++|.. ......+++++.++|||||++++-+..
T Consensus 131 ~V~~d~~~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 172 (236)
T 1zx0_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNLT 172 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCHH
T ss_pred EEEECCcccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEecC
Confidence 9999322 112335689999999999999987654
No 87
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.55 E-value=2.9e-14 Score=124.66 Aligned_cols=103 Identities=21% Similarity=0.315 Sum_probs=88.4
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
+.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...++..+++++++|+.+..+.. +++||+|
T Consensus 69 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~fD~v 140 (285)
T 4htf_A 69 KLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHL-----ETPVDLI 140 (285)
T ss_dssp CCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGC-----SSCEEEE
T ss_pred CCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhc-----CCCceEE
Confidence 569999999999999999986 57999999999999999999998888778999999997654221 5899999
Q ss_pred EEeCC---ccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 200 FVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 200 ~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
++... ..+...+++.+.++|+|||++++...
T Consensus 141 ~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 141 LFHAVLEWVADPRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp EEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EECchhhcccCHHHHHHHHHHHcCCCeEEEEEEe
Confidence 99865 34567899999999999999999764
No 88
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.55 E-value=5.3e-14 Score=123.96 Aligned_cols=109 Identities=16% Similarity=0.118 Sum_probs=87.0
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh-CCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-GVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
++.+|||||||+|..+..+++.++...+|+++|+++.+++.|+++++.. +...+++++++|+.+...........++||
T Consensus 36 ~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD 115 (299)
T 3g5t_A 36 ERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKID 115 (299)
T ss_dssp CCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCee
Confidence 5779999999999999999987744789999999999999999999886 455679999999976421100000027899
Q ss_pred EEEEeCCc--cchHHHHHHHHccCCCCcEEEE
Q 023645 198 FAFVDAEK--RMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 198 lI~id~~~--~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+|++.... -+...+++.+.++|+|||.|++
T Consensus 116 ~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i 147 (299)
T 3g5t_A 116 MITAVECAHWFDFEKFQRSAYANLRKDGTIAI 147 (299)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHEEEEEEEEE
T ss_pred EEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEE
Confidence 99987541 1678899999999999999998
No 89
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.55 E-value=4.6e-14 Score=126.63 Aligned_cols=121 Identities=16% Similarity=0.245 Sum_probs=93.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC----------CCC
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG----------VSH 171 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g----------~~~ 171 (279)
...+.....+...+...++.+|||+|||+|..+..+++..++.++|+++|+++.+++.|+++++..+ ...
T Consensus 88 ~~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~ 167 (336)
T 2b25_A 88 ITFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPD 167 (336)
T ss_dssp CCCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCC
T ss_pred ccCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCC
Confidence 4566655556666677788999999999999999999986446899999999999999999998643 235
Q ss_pred cEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 172 KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 172 ~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+++++++|+.+....+. +++||+|+++.... ..+++.+.+.|+|||.+++-
T Consensus 168 ~v~~~~~d~~~~~~~~~----~~~fD~V~~~~~~~--~~~l~~~~~~LkpgG~lv~~ 218 (336)
T 2b25_A 168 NVDFIHKDISGATEDIK----SLTFDAVALDMLNP--HVTLPVFYPHLKHGGVCAVY 218 (336)
T ss_dssp CEEEEESCTTCCC-----------EEEEEECSSST--TTTHHHHGGGEEEEEEEEEE
T ss_pred ceEEEECChHHcccccC----CCCeeEEEECCCCH--HHHHHHHHHhcCCCcEEEEE
Confidence 79999999976532221 46799999986533 24788999999999999974
No 90
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=99.54 E-value=1.6e-13 Score=124.71 Aligned_cols=148 Identities=18% Similarity=0.251 Sum_probs=101.1
Q ss_pred CCCEEEEEcCc------cCHHHHHHHHH-CCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHh
Q 023645 119 GAQRCIEVGVY------TGYSSLAIALV-LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALIL 189 (279)
Q Consensus 119 ~~~~VLEiG~G------~G~~t~~la~~-~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~ 189 (279)
++.+||||||| +|..++.+++. +| +++|+++|+++++. . ...+++++++|+.+. ...+..
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP-~a~V~GVDiSp~m~---------~-~~~rI~fv~GDa~dlpf~~~l~~ 284 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFP-RGQIYGLDIMDKSH---------V-DELRIRTIQGDQNDAEFLDRIAR 284 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCT-TCEEEEEESSCCGG---------G-CBTTEEEEECCTTCHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCC-CCEEEEEECCHHHh---------h-cCCCcEEEEecccccchhhhhhc
Confidence 57899999999 77777777765 45 78999999999972 1 235799999999763 211111
Q ss_pred CCCCCcEEEEEEeCCc--cchHHHHHHHHccCCCCcEEEEeCCCC------CCcccCcccCChhhHHHHHHHHHhhhC--
Q 023645 190 NGEASSYDFAFVDAEK--RMYQEYFELLLQLIRVGGIIVIDNVLW------HGKVADQMVNDAKTISIRNFNKNLMED-- 259 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~--~~~~~~l~~~~~~Lk~gG~lv~dd~~~------~g~~~~~~~~~~~~~~~~~~~~~l~~~-- 259 (279)
. .++||+|+++..+ .+....|+++.++|||||++++.|+.+ .|...+......-...++++.+.+...
T Consensus 285 ~--d~sFDlVisdgsH~~~d~~~aL~el~rvLKPGGvlVi~Dl~tsy~p~f~G~~~~~~~~~tii~~lk~l~D~l~~~~~ 362 (419)
T 3sso_A 285 R--YGPFDIVIDDGSHINAHVRTSFAALFPHVRPGGLYVIEDMWTAYWPGFGGQADPQECSGTSLGLLKSLIDAIQHQEL 362 (419)
T ss_dssp H--HCCEEEEEECSCCCHHHHHHHHHHHGGGEEEEEEEEEECGGGGGCTBTTCCSSTTCCTTSHHHHHHHHHHHHTGGGS
T ss_pred c--cCCccEEEECCcccchhHHHHHHHHHHhcCCCeEEEEEecccccCcccCCCccCCcchhHHHHHHHHHHHHhccccc
Confidence 0 3789999998753 456788999999999999999999882 222111111112223466666655321
Q ss_pred -------CCeE---EEEeecCCceEEEEEC
Q 023645 260 -------ERVS---ISMVPIGDGMTICQKR 279 (279)
Q Consensus 260 -------~~~~---~~~lp~~~G~~i~~~~ 279 (279)
|.+. +.-+.+.++|.+..|+
T Consensus 363 ~~~~~~~~~~~~~~~~~~h~y~~i~~~~kg 392 (419)
T 3sso_A 363 PSDPNRSPGYVDRNIVGLHVYHNVAFVEKG 392 (419)
T ss_dssp CCCTTCCCCHHHHHEEEEEEETTEEEEEES
T ss_pred CCCcCCCCCccccceeEEEecCcEEEEEec
Confidence 1221 5678889999998884
No 91
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.54 E-value=2.7e-14 Score=123.15 Aligned_cols=109 Identities=16% Similarity=0.222 Sum_probs=89.4
Q ss_pred HHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 114 LVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
.+...++.+|||||||+|..+..+++.. .+|+++|+++.+++.|+++++..++. +++++++|+.+. + + .+
T Consensus 32 ~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~-~v~~~~~d~~~l-~-~----~~ 101 (260)
T 1vl5_A 32 IAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQ-QVEYVQGDAEQM-P-F----TD 101 (260)
T ss_dssp HHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCC-CC-C-S----CT
T ss_pred HhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEEecHHhC-C-C----CC
Confidence 3344577899999999999999999875 49999999999999999999988876 599999998653 1 1 15
Q ss_pred CcEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 194 SSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 194 ~~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
++||+|++... ..+....++++.++|||||.+++.+...
T Consensus 102 ~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~~~~~~~ 143 (260)
T 1vl5_A 102 ERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDNSA 143 (260)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CCEEEEEEhhhhHhcCCHHHHHHHHHHHcCCCCEEEEEEcCC
Confidence 78999998865 3456789999999999999999965543
No 92
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.54 E-value=3e-14 Score=126.95 Aligned_cols=116 Identities=26% Similarity=0.372 Sum_probs=94.1
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH
Q 023645 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 104 ~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (279)
.+.....+...+...++.+|||||||+|..+..+++..+..++|+++|+++++++.|+++++..++.+ ++++.+|+.+.
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~d~~~~ 138 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCGDGYYG 138 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGGC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEECChhhc
Confidence 34444455555566678899999999999999999886645789999999999999999999988876 99999999764
Q ss_pred HHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 184 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 184 l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
++. .++||+|+++...+... +.+.+.|||||++++..
T Consensus 139 ~~~------~~~fD~Iv~~~~~~~~~---~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 139 VPE------FSPYDVIFVTVGVDEVP---ETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CGG------GCCEEEEEECSBBSCCC---HHHHHHEEEEEEEEEEB
T ss_pred ccc------CCCeEEEEEcCCHHHHH---HHHHHhcCCCcEEEEEE
Confidence 331 47899999987755543 56788999999999964
No 93
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.54 E-value=4.9e-14 Score=120.23 Aligned_cols=118 Identities=14% Similarity=0.226 Sum_probs=95.6
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHH
Q 023645 106 DQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 185 (279)
Q Consensus 106 ~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~ 185 (279)
.....+.......++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++...++. +++++++|+.+. +
T Consensus 8 ~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~-~v~~~~~d~~~~-~ 82 (239)
T 1xxl_A 8 HSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVE-NVRFQQGTAESL-P 82 (239)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCC-SEEEEECBTTBC-C
T ss_pred CCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCC-CeEEEecccccC-C
Confidence 334445555666788899999999999999998874 49999999999999999999988876 599999998653 2
Q ss_pred HHHhCCCCCcEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 186 ALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 186 ~~~~~~~~~~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
. .+++||+|++... ..+...+++.+.++|+|||.+++.+...+
T Consensus 83 ~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 128 (239)
T 1xxl_A 83 F-----PDDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVDHYAP 128 (239)
T ss_dssp S-----CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred C-----CCCcEEEEEECCchhhccCHHHHHHHHHHHcCCCcEEEEEEcCCC
Confidence 1 1478999998854 34567899999999999999999765543
No 94
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.54 E-value=3.4e-14 Score=126.08 Aligned_cols=103 Identities=20% Similarity=0.204 Sum_probs=85.8
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
.+|||||||+|..+.++++..+ +.+|++||+++.+++.|++++... ...+++++++|+.+++... .+++||+|+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p-~~~v~~VEidp~vi~~Ar~~~~~~-~~~rv~v~~~Da~~~l~~~----~~~~fDvIi 164 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYP-QSRNTVVELDAELARLSREWFDIP-RAPRVKIRVDDARMVAESF----TPASRDVII 164 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHST-TCEEEEEESCHHHHHHHHHHSCCC-CTTTEEEEESCHHHHHHTC----CTTCEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCC-CcEEEEEECCHHHHHHHHHhcccc-CCCceEEEECcHHHHHhhc----cCCCCCEEE
Confidence 3999999999999999999877 679999999999999999988642 2457999999998876542 146899999
Q ss_pred EeCCcc-------chHHHHHHHHccCCCCcEEEEeC
Q 023645 201 VDAEKR-------MYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 201 id~~~~-------~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+|.... ...++++.+.+.|+|||++++..
T Consensus 165 ~D~~~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 165 RDVFAGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp ECCSTTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 986421 13689999999999999999864
No 95
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.54 E-value=4.1e-14 Score=120.94 Aligned_cols=105 Identities=11% Similarity=0.153 Sum_probs=84.3
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHH------hCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER------AGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~------~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
++.+|||||||+|..+..+++..| +..|+|+|+++.+++.|+++++. .+. .+++++++|+.+.++... .
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p-~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~-~nv~~~~~d~~~~l~~~~---~ 120 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFP-DTLILGLEIRVKVSDYVQDRIRALRAAPAGGF-QNIACLRSNAMKHLPNFF---Y 120 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGST-TSEEEEEESCHHHHHHHHHHHHHHHHSTTCCC-TTEEEEECCTTTCHHHHC---C
T ss_pred CCCeEEEEccCCcHHHHHHHHHCC-CCeEEEEECCHHHHHHHHHHHHHHHHHHhcCC-CeEEEEECcHHHhhhhhC---C
Confidence 456899999999999999999876 68999999999999999988764 344 359999999987555332 1
Q ss_pred CCcEEEEEEeCCccc-----------hHHHHHHHHccCCCCcEEEEe
Q 023645 193 ASSYDFAFVDAEKRM-----------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 193 ~~~fDlI~id~~~~~-----------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+++||.|++...... ...+++.+.++|+|||.|++.
T Consensus 121 ~~~~D~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~LkpGG~l~~~ 167 (235)
T 3ckk_A 121 KGQLTKMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRVGGLVYTI 167 (235)
T ss_dssp TTCEEEEEEESCC-----------CCCHHHHHHHHHHEEEEEEEEEE
T ss_pred CcCeeEEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCCCCEEEEE
Confidence 578999998643211 257899999999999999874
No 96
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.53 E-value=3.1e-14 Score=120.57 Aligned_cols=113 Identities=12% Similarity=0.145 Sum_probs=92.2
Q ss_pred HHHHHhhc-CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHh
Q 023645 111 LAMLVQIL-GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (279)
Q Consensus 111 l~~l~~~~-~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~ 189 (279)
|..+.... ++.+|+|||||+|+.++.++...+ ..+|+++|+++.+++.|+++++.+|+.++++++++|..+.++.
T Consensus 6 L~~l~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~--- 81 (225)
T 3kr9_A 6 LELVASFVSQGAILLDVGSDHAYLPIELVERGQ-IKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEE--- 81 (225)
T ss_dssp HHHHHTTSCTTEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG---
T ss_pred HHHHHHhCCCCCEEEEeCCCcHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhccc---
Confidence 34444443 456999999999999999998755 5799999999999999999999999998999999999865431
Q ss_pred CCCCCcEEEEEEeCC-ccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 190 NGEASSYDFAFVDAE-KRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 190 ~~~~~~fDlI~id~~-~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.++||+|++.+. ......+++.+...|+++|.+|+.-.
T Consensus 82 ---~~~~D~IviaG~Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 82 ---TDQVSVITIAGMGGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp ---GGCCCEEEEEEECHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred ---CcCCCEEEEcCCChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 136999887543 33467888999999999999999655
No 97
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.53 E-value=1.9e-14 Score=122.04 Aligned_cols=106 Identities=16% Similarity=0.199 Sum_probs=87.5
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++..+ +.+++++|+++.+++.|++++...+ +++++++|+.+... .++|
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~-------~~~f 110 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYP-EATFTLVDMSEKMLEIAKNRFRGNL---KVKYIEADYSKYDF-------EEKY 110 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTCSCT---TEEEEESCTTTCCC-------CSCE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHhhccCC---CEEEEeCchhccCC-------CCCc
Confidence 34568999999999999999999986 7899999999999999999876544 69999999975421 3789
Q ss_pred EEEEEeCCccc-----hHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 197 DFAFVDAEKRM-----YQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 197 DlI~id~~~~~-----~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
|+|++...... ...+++.+.++|+|||.+++.+...+
T Consensus 111 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 111 DMVVSALSIHHLEDEDKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred eEEEEeCccccCCHHHHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 99999865322 23589999999999999999876544
No 98
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.53 E-value=7.4e-15 Score=129.99 Aligned_cols=109 Identities=15% Similarity=0.090 Sum_probs=90.1
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..++....++.+|+++|+++.+++.|++++...++.++++++++|+.+... .++|
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~f 188 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDT-------REGY 188 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCC-------CSCE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCc-------cCCe
Confidence 456789999999999999998633333789999999999999999999998988889999999976421 4789
Q ss_pred EEEEEeCCc------cchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 197 DFAFVDAEK------RMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 197 DlI~id~~~------~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
|+|++.... .....+++.+.+.|+|||++++.+...
T Consensus 189 D~v~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 230 (305)
T 3ocj_A 189 DLLTSNGLNIYEPDDARVTELYRRFWQALKPGGALVTSFLTP 230 (305)
T ss_dssp EEEECCSSGGGCCCHHHHHHHHHHHHHHEEEEEEEEEECCCC
T ss_pred EEEEECChhhhcCCHHHHHHHHHHHHHhcCCCeEEEEEecCC
Confidence 999987642 223347999999999999999988654
No 99
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.53 E-value=7.2e-14 Score=120.64 Aligned_cols=121 Identities=12% Similarity=-0.002 Sum_probs=89.7
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHH----------h----
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER----------A---- 167 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~----------~---- 167 (279)
...+...+++..+....++.+|||+|||+|..+.+|++. +.+|+|||+|+.+++.|++.... .
T Consensus 51 ~~~~~l~~~~~~~~~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~ 127 (252)
T 2gb4_A 51 QGHQLLKKHLDTFLKGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKV 127 (252)
T ss_dssp TCCHHHHHHHHHHHTTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEE
T ss_pred CCCHHHHHHHHHhccCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccc
Confidence 455665566555544346789999999999999999986 56999999999999999775431 0
Q ss_pred --CCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCC-----ccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 168 --GVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 168 --g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
....+++++++|+.+.... +.++||+|+.... ......+++.+.++|||||.+++-.+
T Consensus 128 ~~~~~~~i~~~~~D~~~l~~~-----~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~~ 192 (252)
T 2gb4_A 128 FKSSSGSISLYCCSIFDLPRA-----NIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAVL 192 (252)
T ss_dssp EEETTSSEEEEESCTTTGGGG-----CCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccCCCceEEEECccccCCcc-----cCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEEE
Confidence 0124699999999865321 0278999996543 33456789999999999999865433
No 100
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=4.7e-14 Score=118.08 Aligned_cols=115 Identities=20% Similarity=0.323 Sum_probs=92.6
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH
Q 023645 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 104 ~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (279)
.+.....+...+...++.+|||||||+|..+..+++..++..+|+++|+++.+++.+++++...+..+ ++++.+|+.+.
T Consensus 62 ~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~~ 140 (215)
T 2yxe_A 62 AIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIVGDGTLG 140 (215)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEESCGGGC
T ss_pred cHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEECCcccC
Confidence 45555555555566678899999999999999999987445799999999999999999999888765 99999998643
Q ss_pred HHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 184 LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 184 l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
++. .++||+|+++....... +.+.++|+|||.+++.
T Consensus 141 ~~~------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 141 YEP------LAPYDRIYTTAAGPKIP---EPLIRQLKDGGKLLMP 176 (215)
T ss_dssp CGG------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEE
T ss_pred CCC------CCCeeEEEECCchHHHH---HHHHHHcCCCcEEEEE
Confidence 321 36899999987655433 4788999999999985
No 101
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.53 E-value=6e-14 Score=122.25 Aligned_cols=124 Identities=21% Similarity=0.266 Sum_probs=99.1
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh-C-CCCcEEE
Q 023645 98 GSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-G-VSHKVKI 175 (279)
Q Consensus 98 ~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g-~~~~v~~ 175 (279)
.....+.+.....+...+...++.+|||+|||+|..+..+++.+.+.++|+++|+++++++.|+++++.. | +.+++++
T Consensus 78 ~~~~~~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~ 157 (280)
T 1i9g_A 78 RGPQVIYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRL 157 (280)
T ss_dssp SCSCCCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEE
T ss_pred ccceeecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEE
Confidence 3344456666666666666778889999999999999999987644689999999999999999999887 5 4557999
Q ss_pred EEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 176 KHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 176 ~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+++|+.+.. + .+++||+|+++.. +...+++.+.+.|+|||.+++..
T Consensus 158 ~~~d~~~~~--~----~~~~~D~v~~~~~--~~~~~l~~~~~~L~pgG~l~~~~ 203 (280)
T 1i9g_A 158 VVSDLADSE--L----PDGSVDRAVLDML--APWEVLDAVSRLLVAGGVLMVYV 203 (280)
T ss_dssp ECSCGGGCC--C----CTTCEEEEEEESS--CGGGGHHHHHHHEEEEEEEEEEE
T ss_pred EECchHhcC--C----CCCceeEEEECCc--CHHHHHHHHHHhCCCCCEEEEEe
Confidence 999997641 1 1468999999765 33478899999999999999854
No 102
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.53 E-value=2.7e-13 Score=111.18 Aligned_cols=146 Identities=10% Similarity=-0.005 Sum_probs=100.8
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..++.++...| +.+|+++|+|+.+++.+++++...|..+++++ +|..+..+ .++||
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~p-~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~-------~~~~D 117 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNENE-KIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVY-------KGTYD 117 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSSC-CCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHT-------TSEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcCC-CCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCC-------CCCcC
Confidence 4578999999999999999988766 67999999999999999999999998866776 56654322 68899
Q ss_pred EEEEeCCccc---hHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCceE
Q 023645 198 FAFVDAEKRM---YQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDGMT 274 (279)
Q Consensus 198 lI~id~~~~~---~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~ 274 (279)
+|+.....+. ....+..+.+.|+|||++|--++-.-|.- .+...... -..|.+.+ .......-.+-+++-+.
T Consensus 118 vVLa~k~LHlL~~~~~al~~v~~~L~pggvfISfptksl~Gr-~~gm~~~Y---~~~~~~~~-~~~~~~~~~~~~~nEl~ 192 (200)
T 3fzg_A 118 VVFLLKMLPVLKQQDVNILDFLQLFHTQNFVISFPIKSLSGK-EKGMEENY---QLWFESFT-KGWIKILDSKVIGNELV 192 (200)
T ss_dssp EEEEETCHHHHHHTTCCHHHHHHTCEEEEEEEEEECCCCC---CTTCCCCH---HHHHHHHT-TTTSCEEEEEEETTEEE
T ss_pred hhhHhhHHHhhhhhHHHHHHHHHHhCCCCEEEEeChHHhcCC-CcchhhhH---HHHHHHhc-cCcceeeeeeeeCceEE
Confidence 9998765332 22345578999999999998763221110 01111111 23455555 45555556666776665
Q ss_pred EEEE
Q 023645 275 ICQK 278 (279)
Q Consensus 275 i~~~ 278 (279)
...+
T Consensus 193 y~~~ 196 (200)
T 3fzg_A 193 YITS 196 (200)
T ss_dssp EEEC
T ss_pred EEEe
Confidence 5444
No 103
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.53 E-value=8.7e-14 Score=117.52 Aligned_cols=120 Identities=20% Similarity=0.257 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHH--hhcCCCEEEEEcCccCHHHHHHHHHCC----CCCEEEEEeCChhHHHHHHHHHHHhCC----CCcE
Q 023645 104 SPDQAQLLAMLV--QILGAQRCIEVGVYTGYSSLAIALVLP----ESGCLVACERDARSLEVAKKYYERAGV----SHKV 173 (279)
Q Consensus 104 ~~~~~~~l~~l~--~~~~~~~VLEiG~G~G~~t~~la~~~~----~~~~v~~iD~s~~~~~~a~~~~~~~g~----~~~v 173 (279)
.+.....+...+ ...++.+|||||||+|+.+..+++... +.++|+++|+++++++.|+++++..++ .+++
T Consensus 63 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v 142 (227)
T 2pbf_A 63 APHMHALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNF 142 (227)
T ss_dssp CHHHHHHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTE
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCE
Confidence 344433333333 355678999999999999999999874 467999999999999999999998873 3469
Q ss_pred EEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 174 KIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 174 ~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+++.+|+.+..+.... ..++||+|+++..... +++.+.+.|+|||.+++.
T Consensus 143 ~~~~~d~~~~~~~~~~--~~~~fD~I~~~~~~~~---~~~~~~~~LkpgG~lv~~ 192 (227)
T 2pbf_A 143 KIIHKNIYQVNEEEKK--ELGLFDAIHVGASASE---LPEILVDLLAENGKLIIP 192 (227)
T ss_dssp EEEECCGGGCCHHHHH--HHCCEEEEEECSBBSS---CCHHHHHHEEEEEEEEEE
T ss_pred EEEECChHhcccccCc--cCCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEE
Confidence 9999999774310000 0378999999877554 357788999999999985
No 104
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.53 E-value=3.6e-14 Score=123.30 Aligned_cols=108 Identities=22% Similarity=0.248 Sum_probs=91.7
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++..| +.+|+++|+++.+++.+++++...+.. +++++.+|+.+... .+++|
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~------~~~~f 106 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNP-DAEITSIDISPESLEKARENTEKNGIK-NVKFLQANIFSLPF------EDSSF 106 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCT-TSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGGCCS------CTTCE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CcEEEEcccccCCC------CCCCe
Confidence 35678999999999999999999876 689999999999999999999988876 49999999975321 15789
Q ss_pred EEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 197 DFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 197 DlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
|+|++... ..+...+++.+.++|+|||++++.+..+
T Consensus 107 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (276)
T 3mgg_A 107 DHIFVCFVLEHLQSPEEALKSLKKVLKPGGTITVIEGDH 145 (276)
T ss_dssp EEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEECG
T ss_pred eEEEEechhhhcCCHHHHHHHHHHHcCCCcEEEEEEcCC
Confidence 99998765 3456789999999999999999977544
No 105
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.53 E-value=1.6e-13 Score=126.83 Aligned_cols=125 Identities=18% Similarity=0.168 Sum_probs=95.8
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHH-------HHHHHHhCCC-CcEEEE
Q 023645 105 PDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVA-------KKYYERAGVS-HKVKIK 176 (279)
Q Consensus 105 ~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a-------~~~~~~~g~~-~~v~~~ 176 (279)
+.....+...+...++.+|||||||+|..++.+++..+ ..+|+|+|+++.+++.| +++++..|+. .+++++
T Consensus 228 p~~v~~ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~g-~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i 306 (433)
T 1u2z_A 228 PNFLSDVYQQCQLKKGDTFMDLGSGVGNCVVQAALECG-CALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFS 306 (433)
T ss_dssp HHHHHHHHHHTTCCTTCEEEEESCTTSHHHHHHHHHHC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEE
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEE
Confidence 44444444445566788999999999999999998765 46899999999999999 8888888853 569999
Q ss_pred EcChhhH---HHHHHhCCCCCcEEEEEEeCC--ccchHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 177 HGLAADS---LKALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 177 ~gd~~~~---l~~~~~~~~~~~fDlI~id~~--~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
++|.... ++.. .++||+|+++.. ..+....+..+.+.|||||.|++.+.+.+..
T Consensus 307 ~gD~~~~~~~~~~~-----~~~FDvIvvn~~l~~~d~~~~L~el~r~LKpGG~lVi~d~f~p~~ 365 (433)
T 1u2z_A 307 LKKSFVDNNRVAEL-----IPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLKSLRSLT 365 (433)
T ss_dssp ESSCSTTCHHHHHH-----GGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESSCSSCTT
T ss_pred EcCccccccccccc-----cCCCCEEEEeCccccccHHHHHHHHHHhCCCCeEEEEeeccCCcc
Confidence 9865421 2222 368999998643 3556678899999999999999987665543
No 106
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.52 E-value=3.1e-14 Score=126.34 Aligned_cols=110 Identities=11% Similarity=0.131 Sum_probs=92.4
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++.. +++|+++|+++.+++.|+++++..++.++++++++|+.+.. + .+++|
T Consensus 115 ~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--~----~~~~f 186 (312)
T 3vc1_A 115 AGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTP--F----DKGAV 186 (312)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--C----CTTCE
T ss_pred CCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCC--C----CCCCE
Confidence 4457899999999999999999875 47999999999999999999999999888999999997532 1 15799
Q ss_pred EEEEEeCC--ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 197 DFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 197 DlI~id~~--~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
|+|++... .-+...+++.+.++|||||.+++.+.....
T Consensus 187 D~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 226 (312)
T 3vc1_A 187 TASWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCWNP 226 (312)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEECT
T ss_pred eEEEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccccc
Confidence 99998754 224788999999999999999987655444
No 107
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.52 E-value=6e-14 Score=123.18 Aligned_cols=106 Identities=20% Similarity=0.307 Sum_probs=87.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC--C-CCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--V-SHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--~-~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++...+ + ..+++++.+|+.+.++.. .+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~-----~~ 150 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKS-VENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV-----TN 150 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTT-CCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC-----CS
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCC-CCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC-----CC
Confidence 4578999999999999999987644 6799999999999999999886432 2 357999999998876653 57
Q ss_pred cEEEEEEeCCc-----cch--HHHHHHHHccCCCCcEEEEeC
Q 023645 195 SYDFAFVDAEK-----RMY--QEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 195 ~fDlI~id~~~-----~~~--~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+||+|++|... ... .++++.+.+.|+|||++++..
T Consensus 151 ~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 151 TYDVIIVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CEEEEEEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CceEEEEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 89999998641 111 689999999999999999974
No 108
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.52 E-value=4.1e-14 Score=129.03 Aligned_cols=106 Identities=10% Similarity=0.117 Sum_probs=88.2
Q ss_pred HhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCC--cEEEEEcChhhHHHHHHhCCC
Q 023645 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH--KVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~--~v~~~~gd~~~~l~~~~~~~~ 192 (279)
+...++.+|||+|||+|..+..+++..| +.+|+++|+++.+++.|+++++.+++.+ +++++.+|+.+.++
T Consensus 218 l~~~~~~~VLDlGcG~G~~s~~la~~~p-~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~------- 289 (375)
T 4dcm_A 218 LPENLEGEIVDLGCGNGVIGLTLLDKNP-QAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE------- 289 (375)
T ss_dssp CCCSCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC-------
T ss_pred CcccCCCeEEEEeCcchHHHHHHHHHCC-CCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC-------
Confidence 3334557999999999999999999876 6899999999999999999999988754 58889999976432
Q ss_pred CCcEEEEEEeCCcc--------chHHHHHHHHccCCCCcEEEEe
Q 023645 193 ASSYDFAFVDAEKR--------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 193 ~~~fDlI~id~~~~--------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+++||+|+++.+.. ....+++.+.+.|+|||.+++-
T Consensus 290 ~~~fD~Ii~nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv 333 (375)
T 4dcm_A 290 PFRFNAVLCNPPFHQQHALTDNVAWEMFHHARRCLKINGELYIV 333 (375)
T ss_dssp TTCEEEEEECCCC-------CCHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCeeEEEECCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 57899999986632 2346789999999999999983
No 109
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.52 E-value=1.9e-13 Score=125.52 Aligned_cols=110 Identities=19% Similarity=0.270 Sum_probs=93.7
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCC-CCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV-SHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~-~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
..++++|||+|||+|..++.++... ..+|+++|+++.+++.|+++++.+++ .++++++++|+.+.++.+... ..+
T Consensus 218 ~~~~~~VLDl~cG~G~~sl~la~~g--~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~--~~~ 293 (396)
T 3c0k_A 218 YVENKRVLNCFSYTGGFAVSALMGG--CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDR--GEK 293 (396)
T ss_dssp HCTTCEEEEESCTTCSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHT--TCC
T ss_pred hhCCCeEEEeeccCCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhc--CCC
Confidence 3577899999999999999999852 35999999999999999999999998 657999999999877654322 368
Q ss_pred EEEEEEeCCc------------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 196 YDFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 196 fDlI~id~~~------------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
||+|++|++. ..+..++..+.++|+|||++++...
T Consensus 294 fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 340 (396)
T 3c0k_A 294 FDVIVMDPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSC 340 (396)
T ss_dssp EEEEEECCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 9999999764 5677889999999999999998654
No 110
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.52 E-value=5.1e-15 Score=126.26 Aligned_cols=110 Identities=13% Similarity=0.084 Sum_probs=88.8
Q ss_pred HHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHh
Q 023645 110 LLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (279)
Q Consensus 110 ~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~ 189 (279)
++..+....++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++++..++.++++++++|+.+..+
T Consensus 69 l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~---- 141 (241)
T 3gdh_A 69 IAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLAS---- 141 (241)
T ss_dssp HHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGG----
T ss_pred HHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcc----
Confidence 3344444457889999999999999999986 479999999999999999999999986679999999987542
Q ss_pred CCCCCcEEEEEEeCCccc---hHHHHHHHHccCCCCcEEEEeC
Q 023645 190 NGEASSYDFAFVDAEKRM---YQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~~~---~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.++||+|+++.+... ....+..+.++|+|||+++++.
T Consensus 142 ---~~~~D~v~~~~~~~~~~~~~~~~~~~~~~L~pgG~~i~~~ 181 (241)
T 3gdh_A 142 ---FLKADVVFLSPPWGGPDYATAETFDIRTMMSPDGFEIFRL 181 (241)
T ss_dssp ---GCCCSEEEECCCCSSGGGGGSSSBCTTTSCSSCHHHHHHH
T ss_pred ---cCCCCEEEECCCcCCcchhhhHHHHHHhhcCCcceeHHHH
Confidence 579999999876332 2224556778999999987764
No 111
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.52 E-value=1.3e-13 Score=113.40 Aligned_cols=105 Identities=14% Similarity=0.182 Sum_probs=87.1
Q ss_pred HHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 114 LVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
++...++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++...++. +++++.+|+.+... .
T Consensus 27 ~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~-~~~~~~~d~~~~~~-------~ 95 (199)
T 2xvm_A 27 AVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLD-NLHTRVVDLNNLTF-------D 95 (199)
T ss_dssp HTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCT-TEEEEECCGGGCCC-------C
T ss_pred HhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCC-CcEEEEcchhhCCC-------C
Confidence 344456789999999999999999986 469999999999999999999888875 49999999876321 4
Q ss_pred CcEEEEEEeCC-----ccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
++||+|++... ......+++.+.++|+|||.+++-+
T Consensus 96 ~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 136 (199)
T 2xvm_A 96 RQYDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVA 136 (199)
T ss_dssp CCEEEEEEESCGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCceEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEE
Confidence 78999998764 2356789999999999999977644
No 112
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.51 E-value=1.2e-13 Score=122.53 Aligned_cols=106 Identities=12% Similarity=0.194 Sum_probs=84.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHH---hCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYER---AGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~---~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
.++++|||||||+|..+..+++..+ ..+|+++|+++.+++.|++++.. .....+++++.+|+.+.+... .++
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~-~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~----~~~ 168 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGT-VEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQT----PDN 168 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSS----CTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCC-CCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhc----cCC
Confidence 4578999999999999999997643 57999999999999999998743 222457999999998765421 147
Q ss_pred cEEEEEEeCCccc-------hHHHHHHHHccCCCCcEEEEe
Q 023645 195 SYDFAFVDAEKRM-------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 195 ~fDlI~id~~~~~-------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+||+|++|..... ..++++.+.+.|+|||++++.
T Consensus 169 ~fDvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 209 (304)
T 3bwc_A 169 TYDVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQ 209 (304)
T ss_dssp CEEEEEEECC---------CCHHHHHHHHHHEEEEEEEEEE
T ss_pred ceeEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 8999999875222 158899999999999999986
No 113
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.51 E-value=2.1e-13 Score=124.77 Aligned_cols=109 Identities=16% Similarity=0.178 Sum_probs=90.1
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCC-cEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
.++++|||+|||+|..++.++... ..+|+++|+++.+++.|+++++.+++.+ +++++++|+.+.++.+... ..+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g--a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~--~~~f 286 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG--AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRH--HLTY 286 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT--BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHT--TCCE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC--CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHh--CCCc
Confidence 567899999999999999999752 2499999999999999999999999875 7999999999877655322 3589
Q ss_pred EEEEEeCCc------------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 197 DFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 197 DlI~id~~~------------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
|+|++|++. ..+..++..+.++|+|||++++...
T Consensus 287 D~Ii~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 287 DIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp EEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred cEEEECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 999998763 1244566777899999999998754
No 114
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.51 E-value=5.6e-14 Score=119.33 Aligned_cols=105 Identities=13% Similarity=0.101 Sum_probs=87.0
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...+...+++++++|+.+..+ .++||+
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD~ 135 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASP---ERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRP-------TELFDL 135 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBT---TEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCC-------SSCEEE
T ss_pred CCCCEEEeCCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCC-------CCCeeE
Confidence 4569999999999999988763 679999999999999999998876666679999999976432 468999
Q ss_pred EEEeCC-----ccchHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 199 AFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 199 I~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
|++... ......+++.+.++|+|||.+++......
T Consensus 136 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~ 175 (235)
T 3lcc_A 136 IFDYVFFCAIEPEMRPAWAKSMYELLKPDGELITLMYPIT 175 (235)
T ss_dssp EEEESSTTTSCGGGHHHHHHHHHHHEEEEEEEEEEECCCS
T ss_pred EEEChhhhcCCHHHHHHHHHHHHHHCCCCcEEEEEEeccc
Confidence 998654 33677899999999999999998655443
No 115
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.51 E-value=7.3e-14 Score=117.31 Aligned_cols=104 Identities=16% Similarity=0.156 Sum_probs=79.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++..+ +++|+|+|+++.+++.+.+..+.. +++.++.+|+.+..... . ..++||
T Consensus 56 ~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~---~~v~~~~~d~~~~~~~~--~-~~~~fD 128 (210)
T 1nt2_A 56 RGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER---NNIIPLLFDASKPWKYS--G-IVEKVD 128 (210)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC---SSEEEECSCTTCGGGTT--T-TCCCEE
T ss_pred CCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC---CCeEEEEcCCCCchhhc--c-ccccee
Confidence 4567999999999999999999887 689999999999887666655532 35888989886531100 0 047899
Q ss_pred EEEEeCCccc-hHHHHHHHHccCCCCcEEEEe
Q 023645 198 FAFVDAEKRM-YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 198 lI~id~~~~~-~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+|+++..... ...+++++.++|||||.+++.
T Consensus 129 ~V~~~~~~~~~~~~~l~~~~r~LkpgG~l~i~ 160 (210)
T 1nt2_A 129 LIYQDIAQKNQIEILKANAEFFLKEKGEVVIM 160 (210)
T ss_dssp EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEeccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence 9999865443 334589999999999999986
No 116
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.51 E-value=4.3e-13 Score=130.83 Aligned_cols=156 Identities=10% Similarity=0.086 Sum_probs=113.1
Q ss_pred HHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh------CCCCcEEEEEcChhh
Q 023645 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA------GVSHKVKIKHGLAAD 182 (279)
Q Consensus 109 ~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~------g~~~~v~~~~gd~~~ 182 (279)
..+...+...++.+|||||||+|..+..+++..++..+|+|+|+++.+++.|++++... ++ .+++++++|+.+
T Consensus 711 e~LLelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl-~nVefiqGDa~d 789 (950)
T 3htx_A 711 EYALKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNV-KSATLYDGSILE 789 (950)
T ss_dssp HHHHHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSC-SEEEEEESCTTS
T ss_pred HHHHHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCC-CceEEEECchHh
Confidence 33444455568899999999999999999987644579999999999999999977643 33 369999999976
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCccc-----hHHHHHHHHccCCCCcEEEEeCCC------CCCc----------------
Q 023645 183 SLKALILNGEASSYDFAFVDAEKRM-----YQEYFELLLQLIRVGGIIVIDNVL------WHGK---------------- 235 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~~-----~~~~l~~~~~~Lk~gG~lv~dd~~------~~g~---------------- 235 (279)
... ..++||+|++....++ ...+++.+.++|||| .+++.... +.+.
T Consensus 790 Lp~------~d~sFDlVV~~eVLeHL~dp~l~~~L~eI~RvLKPG-~LIISTPN~eyN~lF~~Lnp~tr~~dPd~~~~~~ 862 (950)
T 3htx_A 790 FDS------RLHDVDIGTCLEVIEHMEEDQACEFGEKVLSLFHPK-LLIVSTPNYEFNTILQRSTPETQEENNSEPQLPK 862 (950)
T ss_dssp CCT------TSCSCCEEEEESCGGGSCHHHHHHHHHHHHHTTCCS-EEEEEECBGGGHHHHTCC------------CCSS
T ss_pred CCc------ccCCeeEEEEeCchhhCChHHHHHHHHHHHHHcCCC-EEEEEecCchhhhhhhhccccccccccccccccc
Confidence 422 1578999999766333 335789999999999 66665432 2211
Q ss_pred ccCcc-cCChhhHHHHHHHHHhhhCCCeEEEEeecCCc
Q 023645 236 VADQM-VNDAKTISIRNFNKNLMEDERVSISMVPIGDG 272 (279)
Q Consensus 236 ~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G 272 (279)
+..+. ...-....+++|.+.+.++.++.+...++|+|
T Consensus 863 fRh~DHrFEWTReEFr~Wae~LAer~GYsVefvGVGDg 900 (950)
T 3htx_A 863 FRNHDHKFEWTREQFNQWASKLGKRHNYSVEFSGVGGS 900 (950)
T ss_dssp CSCSSCSCCBCHHHHHHHHHHHHHHTTEEEEEEEESSC
T ss_pred ccccCcceeecHHHHHHHHHHHHHhcCcEEEEEccCCC
Confidence 00000 00112345777888899999999999999998
No 117
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.50 E-value=1.6e-13 Score=128.71 Aligned_cols=126 Identities=20% Similarity=0.248 Sum_probs=102.0
Q ss_pred CCCHHHHHHHHHHHhhc--CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC
Q 023645 102 QVSPDQAQLLAMLVQIL--GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~--~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (279)
.+......++..++... ++.+|||+|||+|..|..+++.++..++|+++|+++.+++.+++++++.|+.+ ++++++|
T Consensus 98 ~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~n-v~~~~~D 176 (479)
T 2frx_A 98 YIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISN-VALTHFD 176 (479)
T ss_dssp EECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCS-EEEECCC
T ss_pred EEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCc-EEEEeCC
Confidence 44555555666666666 78899999999999999999988756899999999999999999999999864 9999999
Q ss_pred hhhHHHHHHhCCCCCcEEEEEEeCCccc-------------------------hHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 180 AADSLKALILNGEASSYDFAFVDAEKRM-------------------------YQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 180 ~~~~l~~~~~~~~~~~fDlI~id~~~~~-------------------------~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
+.+..... .++||.|++|++... ....++.+.++|||||.|++..+.+.
T Consensus 177 ~~~~~~~~-----~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~l~~~q~~iL~~a~~~LkpGG~LvysTcs~~ 250 (479)
T 2frx_A 177 GRVFGAAV-----PEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRPGGTLVYSTCTLN 250 (479)
T ss_dssp STTHHHHS-----TTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESCCS
T ss_pred HHHhhhhc-----cccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHHHHHHHHHHHHHHHHhcCCCCEEEEecccCC
Confidence 97654322 578999999865210 23578888999999999999877654
No 118
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.50 E-value=2.6e-13 Score=124.29 Aligned_cols=102 Identities=23% Similarity=0.360 Sum_probs=86.0
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++++|||+|||+|..++.++.. ++.|+++|+|+.+++.|+++++.+++.. ++.++|+.+.++.. .+.||+
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~---ga~V~avDis~~al~~a~~n~~~ng~~~--~~~~~D~~~~l~~~-----~~~fD~ 283 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARK---GAYALAVDKDLEALGVLDQAALRLGLRV--DIRHGEALPTLRGL-----EGPFHH 283 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCCC--EEEESCHHHHHHTC-----CCCEEE
T ss_pred CCCeEEEcccchhHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHhCCCC--cEEEccHHHHHHHh-----cCCCCE
Confidence 3789999999999999999985 3569999999999999999999999875 56699998877644 345999
Q ss_pred EEEeCCc------------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 199 AFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 199 I~id~~~------------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
|++|++. ..+..+++.+.++|+|||.|++..+
T Consensus 284 Ii~dpP~f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~ 327 (393)
T 4dmg_A 284 VLLDPPTLVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSC 327 (393)
T ss_dssp EEECCCCCCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEECCCcCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 9999873 3466788889999999999996544
No 119
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.50 E-value=7.9e-14 Score=119.64 Aligned_cols=105 Identities=11% Similarity=0.155 Sum_probs=85.8
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh--------CCCCcEEEEEcChhhHHHHHHhC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--------GVSHKVKIKHGLAADSLKALILN 190 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--------g~~~~v~~~~gd~~~~l~~~~~~ 190 (279)
++.+|||||||+|.++..+++..+ +.+|+|+|+++.+++.|+++++.. ++. +++++++|+.+.++...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~-nv~~~~~D~~~~l~~~~-- 124 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFP-EDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQ-NINVLRGNAMKFLPNFF-- 124 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHST-TSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTT-TEEEEECCTTSCGGGTS--
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCC-CCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCC-cEEEEeccHHHHHHHhc--
Confidence 456899999999999999999886 679999999999999999998876 664 59999999987544221
Q ss_pred CCCCcEEEEEEeCCccc-----------hHHHHHHHHccCCCCcEEEEe
Q 023645 191 GEASSYDFAFVDAEKRM-----------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 191 ~~~~~fDlI~id~~~~~-----------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+.+.+|.|++..+... +..+++.+.++|+|||+|++.
T Consensus 125 -~~~~~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~LkpgG~l~~~ 172 (246)
T 2vdv_E 125 -EKGQLSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLKEGGVVYTI 172 (246)
T ss_dssp -CTTCEEEEEEESCCCC------CSSCCCHHHHHHHHHHEEEEEEEEEE
T ss_pred -cccccCEEEEECCCcccccchhHHhhccHHHHHHHHHHcCCCCEEEEE
Confidence 2578999987643221 257899999999999999883
No 120
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.50 E-value=1.9e-13 Score=125.47 Aligned_cols=108 Identities=24% Similarity=0.372 Sum_probs=92.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++++|||+|||+|..++.++.. + ..+|+++|+++.+++.|+++++.+++.++++++++|+.+.++.+... ..+||+
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g-~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~--~~~fD~ 292 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-G-ADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKK--GEKFDI 292 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHT--TCCEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-C-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhh--CCCCCE
Confidence 6789999999999999999986 2 35999999999999999999999998767999999998877654322 368999
Q ss_pred EEEeCCc------------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 199 AFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 199 I~id~~~------------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
|++|++. ..+..++..+.++|+|||++++...
T Consensus 293 Vi~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 293 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred EEECCCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 9999874 4567788999999999998888654
No 121
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.50 E-value=1.1e-13 Score=120.79 Aligned_cols=104 Identities=17% Similarity=0.143 Sum_probs=89.8
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++++|||+|||+|.+++.++... .++|+++|++|.+++.+++|++.+++.++++++++|+.++.+ .+.||
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g--~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~-------~~~~D 194 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG-------ENIAD 194 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC-------CSCEE
T ss_pred CCCCEEEEecCcCcHHHHHHHHhc--CCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhcc-------ccCCC
Confidence 467899999999999999999873 369999999999999999999999999999999999987643 57899
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
.|+++.+... .+++..+.++|++||+|.++...
T Consensus 195 ~Vi~~~p~~~-~~~l~~a~~~lk~gG~ih~~~~~ 227 (278)
T 3k6r_A 195 RILMGYVVRT-HEFIPKALSIAKDGAIIHYHNTV 227 (278)
T ss_dssp EEEECCCSSG-GGGHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEECCCCcH-HHHHHHHHHHcCCCCEEEEEeee
Confidence 9999876433 46788899999999999876543
No 122
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.50 E-value=4.6e-14 Score=119.96 Aligned_cols=107 Identities=10% Similarity=0.131 Sum_probs=86.9
Q ss_pred HHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHh
Q 023645 110 LLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (279)
Q Consensus 110 ~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~ 189 (279)
++..+....++.+|||||||+|..+..+++.. .+|+++|+++.+++.|++.+.. +++++++|+.+..+
T Consensus 33 ~~~~l~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~-----~v~~~~~d~~~~~~---- 100 (250)
T 2p7i_A 33 MVRAFTPFFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD-----GITYIHSRFEDAQL---- 100 (250)
T ss_dssp HHHHHGGGCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS-----CEEEEESCGGGCCC----
T ss_pred HHHHHHhhcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC-----CeEEEEccHHHcCc----
Confidence 34444445677899999999999999998764 4899999999999999987642 59999999976521
Q ss_pred CCCCCcEEEEEEeCC---ccchHHHHHHHH-ccCCCCcEEEEeCCC
Q 023645 190 NGEASSYDFAFVDAE---KRMYQEYFELLL-QLIRVGGIIVIDNVL 231 (279)
Q Consensus 190 ~~~~~~fDlI~id~~---~~~~~~~l~~~~-~~Lk~gG~lv~dd~~ 231 (279)
+++||+|++... ..+...+++++. ++|||||.+++....
T Consensus 101 ---~~~fD~v~~~~~l~~~~~~~~~l~~~~~~~LkpgG~l~i~~~~ 143 (250)
T 2p7i_A 101 ---PRRYDNIVLTHVLEHIDDPVALLKRINDDWLAEGGRLFLVCPN 143 (250)
T ss_dssp ---SSCEEEEEEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred ---CCcccEEEEhhHHHhhcCHHHHHHHHHHHhcCCCCEEEEEcCC
Confidence 578999998765 235678999999 999999999997644
No 123
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.50 E-value=2.3e-13 Score=123.98 Aligned_cols=117 Identities=12% Similarity=0.058 Sum_probs=90.6
Q ss_pred HHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHH-------HHhCCC-CcEEEEEcChhhHH
Q 023645 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYY-------ERAGVS-HKVKIKHGLAADSL 184 (279)
Q Consensus 113 ~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-------~~~g~~-~~v~~~~gd~~~~l 184 (279)
..+...++.+|||||||+|..++.++...+ ..+++|||+++.+++.|+++. +..|+. .+++|++||+.+..
T Consensus 167 ~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g-~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~~lp 245 (438)
T 3uwp_A 167 DEIKMTDDDLFVDLGSGVGQVVLQVAAATN-CKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE 245 (438)
T ss_dssp HHHCCCTTCEEEEESCTTSHHHHHHHHHCC-CSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTTSHH
T ss_pred HhcCCCCCCEEEEeCCCCCHHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECcccCCc
Confidence 334556788999999999999999998765 457999999999999998765 345663 67999999998642
Q ss_pred HHHHhCCCCCcEEEEEEeCC--ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 185 KALILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 185 ~~~~~~~~~~~fDlI~id~~--~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
-... -..||+||++.. ..+....+.++++.|||||.||+.+.+.+.
T Consensus 246 ~~d~----~~~aDVVf~Nn~~F~pdl~~aL~Ei~RvLKPGGrIVssE~f~p~ 293 (438)
T 3uwp_A 246 WRER----IANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAPL 293 (438)
T ss_dssp HHHH----HHTCSEEEECCTTCCHHHHHHHHHHHTTSCTTCEEEESSCSSCT
T ss_pred cccc----cCCccEEEEcccccCchHHHHHHHHHHcCCCCcEEEEeecccCC
Confidence 2100 147999998764 345667788899999999999998766543
No 124
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.50 E-value=4.1e-14 Score=118.43 Aligned_cols=108 Identities=15% Similarity=0.155 Sum_probs=86.3
Q ss_pred HHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHh
Q 023645 110 LLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (279)
Q Consensus 110 ~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~ 189 (279)
++..+....++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++...+ +++++++|+.+..+
T Consensus 42 ~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~---~~~~~~~d~~~~~~---- 111 (216)
T 3ofk_A 42 LLRLSLSSGAVSNGLEIGCAAGAFTEKLAPH---CKRLTVIDVMPRAIGRACQRTKRWS---HISWAATDILQFST---- 111 (216)
T ss_dssp HHHHHTTTSSEEEEEEECCTTSHHHHHHGGG---EEEEEEEESCHHHHHHHHHHTTTCS---SEEEEECCTTTCCC----
T ss_pred HHHHHcccCCCCcEEEEcCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcccCC---CeEEEEcchhhCCC----
Confidence 3444444556679999999999999999886 3599999999999999999886533 69999999976531
Q ss_pred CCCCCcEEEEEEeCCc------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 190 NGEASSYDFAFVDAEK------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+++||+|++.... .....+++.+.++|+|||++++...
T Consensus 112 ---~~~fD~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 155 (216)
T 3ofk_A 112 ---AELFDLIVVAEVLYYLEDMTQMRTAIDNMVKMLAPGGHLVFGSA 155 (216)
T ss_dssp ---SCCEEEEEEESCGGGSSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred ---CCCccEEEEccHHHhCCCHHHHHHHHHHHHHHcCCCCEEEEEec
Confidence 5899999997542 2235679999999999999998653
No 125
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.50 E-value=4.6e-14 Score=120.10 Aligned_cols=106 Identities=13% Similarity=0.113 Sum_probs=85.8
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
+.++.+|||+|||+|+.+..+++..+++++|+++|+++++++.++++.+.. .++..+.+|..+..... ...+.+
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~---~ni~~V~~d~~~p~~~~---~~~~~v 148 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR---RNIFPILGDARFPEKYR---HLVEGV 148 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC---TTEEEEESCTTCGGGGT---TTCCCE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh---cCeeEEEEeccCccccc---cccceE
Confidence 567889999999999999999999877899999999999999998876543 35888888886421100 115789
Q ss_pred EEEEEeCCc-cchHHHHHHHHccCCCCcEEEEe
Q 023645 197 DFAFVDAEK-RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 197 DlI~id~~~-~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|+||++... .+...++.++.+.|||||.+++.
T Consensus 149 DvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 149 DGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp EEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 999998764 44567889999999999999884
No 126
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.50 E-value=1.4e-13 Score=117.45 Aligned_cols=117 Identities=18% Similarity=0.187 Sum_probs=96.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
.+.+.....+...+...++.+|||+|||+|..+..+++. ..+|+++|+++++++.|+++.+..++..+++++.+|+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~ 150 (248)
T 2yvl_A 74 IIYPKDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFK 150 (248)
T ss_dssp CCCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTT
T ss_pred cccchhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChh
Confidence 445666666666677778889999999999999999988 47999999999999999999998888777999999987
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+... .+++||+|+++.. ....+++.+.++|+|||.+++..
T Consensus 151 ~~~~------~~~~~D~v~~~~~--~~~~~l~~~~~~L~~gG~l~~~~ 190 (248)
T 2yvl_A 151 DAEV------PEGIFHAAFVDVR--EPWHYLEKVHKSLMEGAPVGFLL 190 (248)
T ss_dssp TSCC------CTTCBSEEEECSS--CGGGGHHHHHHHBCTTCEEEEEE
T ss_pred hccc------CCCcccEEEECCc--CHHHHHHHHHHHcCCCCEEEEEe
Confidence 6420 1468999999765 34467889999999999999854
No 127
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.50 E-value=1.8e-13 Score=119.61 Aligned_cols=101 Identities=15% Similarity=0.225 Sum_probs=85.7
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||+|||+|..+..+++. +.+|+++|+++.+++.+++++...++ +++++++|+.+... .++|
T Consensus 118 ~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~-------~~~f 185 (286)
T 3m70_A 118 IISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL--NISTALYDINAANI-------QENY 185 (286)
T ss_dssp HSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCGGGCCC-------CSCE
T ss_pred ccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC--ceEEEEeccccccc-------cCCc
Confidence 347789999999999999999986 46999999999999999999998887 69999999976422 4789
Q ss_pred EEEEEeCC-----ccchHHHHHHHHccCCCCcEEEEeC
Q 023645 197 DFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 197 DlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
|+|++... ......+++.+.++|+|||++++-.
T Consensus 186 D~i~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 223 (286)
T 3m70_A 186 DFIVSTVVFMFLNRERVPSIIKNMKEHTNVGGYNLIVA 223 (286)
T ss_dssp EEEEECSSGGGSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cEEEEccchhhCCHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 99999764 3446689999999999999977643
No 128
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.49 E-value=8.4e-14 Score=117.69 Aligned_cols=103 Identities=17% Similarity=0.177 Sum_probs=83.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHH--HHHHhCCCCCc
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL--KALILNGEASS 195 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l--~~~~~~~~~~~ 195 (279)
.++.+|||+|||+|..+..+++.+++.++|+++|+++.+++.++++.+.. .+++++++|+.+.. ... .++
T Consensus 72 ~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~---~~v~~~~~d~~~~~~~~~~-----~~~ 143 (227)
T 1g8a_A 72 KPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER---RNIVPILGDATKPEEYRAL-----VPK 143 (227)
T ss_dssp CTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC---TTEEEEECCTTCGGGGTTT-----CCC
T ss_pred CCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc---CCCEEEEccCCCcchhhcc-----cCC
Confidence 35679999999999999999988654689999999999999999887643 46999999997532 111 358
Q ss_pred EEEEEEeCCccchH-HHHHHHHccCCCCcEEEEe
Q 023645 196 YDFAFVDAEKRMYQ-EYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 196 fDlI~id~~~~~~~-~~l~~~~~~Lk~gG~lv~d 228 (279)
||+|+++....... .++..+.++|+|||.+++.
T Consensus 144 ~D~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 177 (227)
T 1g8a_A 144 VDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp EEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEECCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence 99999998754443 4499999999999999986
No 129
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.49 E-value=2.7e-13 Score=132.78 Aligned_cols=116 Identities=20% Similarity=0.259 Sum_probs=96.6
Q ss_pred HHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCC-CcEEEEEcChhhHHHHHHhCC
Q 023645 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADSLKALILNG 191 (279)
Q Consensus 113 ~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~l~~~~~~~ 191 (279)
.+....++++|||+|||+|.+++.++... ..+|+++|+|+.+++.|+++++.+|+. ++++++++|+.+.++..
T Consensus 533 ~l~~~~~g~~VLDlg~GtG~~sl~aa~~g--a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~---- 606 (703)
T 3v97_A 533 MLGQMSKGKDFLNLFSYTGSATVHAGLGG--ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREA---- 606 (703)
T ss_dssp HHHHHCTTCEEEEESCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHC----
T ss_pred HHHHhcCCCcEEEeeechhHHHHHHHHCC--CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhc----
Confidence 34445578899999999999999998742 357999999999999999999999997 57999999999877654
Q ss_pred CCCcEEEEEEeCCc--------------cchHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 192 EASSYDFAFVDAEK--------------RMYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 192 ~~~~fDlI~id~~~--------------~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
.++||+|++|++. ..+..++..+.++|+|||+|++....+...
T Consensus 607 -~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~~~ll~~a~~~LkpgG~L~~s~~~~~~~ 663 (703)
T 3v97_A 607 -NEQFDLIFIDPPTFSNSKRMEDAFDVQRDHLALMKDLKRLLRAGGTIMFSNNKRGFR 663 (703)
T ss_dssp -CCCEEEEEECCCSBC-------CCBHHHHHHHHHHHHHHHEEEEEEEEEEECCTTCC
T ss_pred -CCCccEEEECCccccCCccchhHHHHHHHHHHHHHHHHHhcCCCcEEEEEECCcccc
Confidence 5789999999862 246677888899999999999987664433
No 130
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.49 E-value=9.8e-14 Score=117.73 Aligned_cols=105 Identities=13% Similarity=0.158 Sum_probs=88.9
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|+|||||+|+.++.+++..+ ..+|+++|+++.+++.|+++++.+|+.++++++++|..+.+.. .++||+
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~-~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~------~~~~D~ 93 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGY-CDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEE------ADNIDT 93 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTC-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG------GGCCCE
T ss_pred CCCEEEEECCchHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhcccc------ccccCE
Confidence 456999999999999999998754 5689999999999999999999999999999999999876531 237999
Q ss_pred EEEeC-CccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 199 AFVDA-EKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 199 I~id~-~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
|++.+ ...-...+++.....|+++|.+|+...
T Consensus 94 IviaGmGg~lI~~IL~~~~~~l~~~~~lIlqp~ 126 (230)
T 3lec_A 94 ITICGMGGRLIADILNNDIDKLQHVKTLVLQPN 126 (230)
T ss_dssp EEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred EEEeCCchHHHHHHHHHHHHHhCcCCEEEEECC
Confidence 87644 344567788888899999999999764
No 131
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.49 E-value=1.5e-13 Score=115.93 Aligned_cols=104 Identities=14% Similarity=0.238 Sum_probs=85.0
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCC----CCcEEEEEcChhhHHHHHHhCCC
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV----SHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~----~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
..++.+|||||||+|..+..+++..++.++|+++|+++.+++.+++++...+. .++++++++|+.+....
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~------ 148 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAE------ 148 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGG------
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCccc------
Confidence 45678999999999999999998864457999999999999999999988764 34699999998643221
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.++||+|+++..... +++.+.+.|||||.+++.-
T Consensus 149 ~~~fD~i~~~~~~~~---~~~~~~~~LkpgG~lv~~~ 182 (226)
T 1i1n_A 149 EAPYDAIHVGAAAPV---VPQALIDQLKPGGRLILPV 182 (226)
T ss_dssp GCCEEEEEECSBBSS---CCHHHHHTEEEEEEEEEEE
T ss_pred CCCcCEEEECCchHH---HHHHHHHhcCCCcEEEEEE
Confidence 468999999876544 3467889999999999953
No 132
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.49 E-value=2.1e-13 Score=124.64 Aligned_cols=110 Identities=25% Similarity=0.368 Sum_probs=93.3
Q ss_pred HHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 114 LVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
+... ++.+|||+|||+|..++.++.. ..+|+++|+++.+++.|+++++.+++.+ ++++++|+.+.++.+... .
T Consensus 205 ~~~~-~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~-~~~~~~d~~~~~~~~~~~--~ 277 (382)
T 1wxx_A 205 MERF-RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGN-VRVLEANAFDLLRRLEKE--G 277 (382)
T ss_dssp GGGC-CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTT-EEEEESCHHHHHHHHHHT--T
T ss_pred HHhc-CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCC-ceEEECCHHHHHHHHHhc--C
Confidence 3344 6779999999999999999987 3699999999999999999999999876 999999999877654322 3
Q ss_pred CcEEEEEEeCCc------------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 194 SSYDFAFVDAEK------------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 194 ~~fDlI~id~~~------------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.+||+|++|++. ..+..++..+.++|+|||++++...
T Consensus 278 ~~fD~Ii~dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 278 ERFDLVVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp CCEEEEEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCeeEEEECCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 689999999864 4567788999999999999998654
No 133
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.49 E-value=4.4e-14 Score=123.25 Aligned_cols=112 Identities=21% Similarity=0.227 Sum_probs=88.5
Q ss_pred HHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh-CCCCcEEEEEcChhhHHHHH
Q 023645 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-GVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 109 ~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-g~~~~v~~~~gd~~~~l~~~ 187 (279)
..+...+...++.+|||+|||+|..+..+++.+.++++|+++|+++.+++.|+++++.. |. ++++++++|+.+.++
T Consensus 100 ~~~~~~~~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~-~~v~~~~~d~~~~~~-- 176 (275)
T 1yb2_A 100 SYIIMRCGLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDI-GNVRTSRSDIADFIS-- 176 (275)
T ss_dssp ------CCCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCC-TTEEEECSCTTTCCC--
T ss_pred HHHHHHcCCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCC-CcEEEEECchhccCc--
Confidence 34444555667789999999999999999987433689999999999999999999887 74 469999999976321
Q ss_pred HhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 188 ILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+++||+|+++.+ ....+++.+.+.|+|||.+++...
T Consensus 177 -----~~~fD~Vi~~~~--~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 177 -----DQMYDAVIADIP--DPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp -----SCCEEEEEECCS--CGGGSHHHHHHTEEEEEEEEEEES
T ss_pred -----CCCccEEEEcCc--CHHHHHHHHHHHcCCCCEEEEEeC
Confidence 468999999654 345789999999999999998653
No 134
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.49 E-value=9.3e-14 Score=119.54 Aligned_cols=107 Identities=8% Similarity=0.128 Sum_probs=88.0
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++.. +.+|+++|+++.+++.|+++.... .+++++++|+.+. +. .+++|
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~-~~-----~~~~f 121 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN---NKIIFEANDILTK-EF-----PENNF 121 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC---TTEEEEECCTTTC-CC-----CTTCE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC---CCeEEEECccccC-CC-----CCCcE
Confidence 4467799999999999999999875 479999999999999999877543 5699999999754 11 15789
Q ss_pred EEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 197 DFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 197 DlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
|+|++.... .+...+++.+.++|+|||.+++.+.....
T Consensus 122 D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 164 (266)
T 3ujc_A 122 DLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDYCATE 164 (266)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEESC
T ss_pred EEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999997652 55678899999999999999998765443
No 135
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.49 E-value=6.3e-14 Score=119.54 Aligned_cols=116 Identities=20% Similarity=0.190 Sum_probs=89.0
Q ss_pred HHHHHHHHhhc----CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH
Q 023645 108 AQLLAMLVQIL----GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 108 ~~~l~~l~~~~----~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (279)
..++..+.... ++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++...+ ..+++++.+|+.+.
T Consensus 64 ~~~~~~l~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~~d~~~~ 140 (241)
T 2ex4_A 64 RKFLQRFLREGPNKTGTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEG-KRVRNYFCCGLQDF 140 (241)
T ss_dssp HHHHHGGGC----CCCCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGG-GGEEEEEECCGGGC
T ss_pred HHHHHHHHHhcccCCCCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcC-CceEEEEEcChhhc
Confidence 34455554433 47899999999999999988764 3699999999999999999987654 34589999998654
Q ss_pred HHHHHhCCCCCcEEEEEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 184 LKALILNGEASSYDFAFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 184 l~~~~~~~~~~~fDlI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
.. .+++||+|++..... ....+++.+.++|+|||++++.+...
T Consensus 141 ~~------~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~ 188 (241)
T 2ex4_A 141 TP------EPDSYDVIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDNMA 188 (241)
T ss_dssp CC------CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEB
T ss_pred CC------CCCCEEEEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEEccC
Confidence 21 146899999986522 24578999999999999999966544
No 136
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.48 E-value=2.4e-13 Score=116.45 Aligned_cols=99 Identities=16% Similarity=0.255 Sum_probs=82.8
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++....+. +++++++|+.+... .++||+
T Consensus 41 ~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~--~v~~~~~d~~~~~~-------~~~fD~ 108 (252)
T 1wzn_A 41 EVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAF-------KNEFDA 108 (252)
T ss_dssp CCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC--CCEEEESCGGGCCC-------CSCEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEECChhhccc-------CCCccE
Confidence 4679999999999999999985 46999999999999999999987775 58999999976421 468999
Q ss_pred EEEeCC------ccchHHHHHHHHccCCCCcEEEEeC
Q 023645 199 AFVDAE------KRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 199 I~id~~------~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
|++... ......+++.+.++|+|||.++++-
T Consensus 109 v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~li~~~ 145 (252)
T 1wzn_A 109 VTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFITDF 145 (252)
T ss_dssp EEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcCCchhcCCHHHHHHHHHHHHHHcCCCeEEEEec
Confidence 997532 2346678999999999999999864
No 137
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.48 E-value=1e-13 Score=126.60 Aligned_cols=118 Identities=21% Similarity=0.271 Sum_probs=92.8
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh-----C-C-CCcEEEEEcChhhHHHHHHh
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-----G-V-SHKVKIKHGLAADSLKALIL 189 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-----g-~-~~~v~~~~gd~~~~l~~~~~ 189 (279)
..++.+|||||||+|..+..+++..+++++|+++|+++.+++.|+++++.. | . ..+++++++|+.+.......
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 456789999999999999999998754789999999999999999988765 3 2 24699999999753110000
Q ss_pred CCCCCcEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 190 NGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 190 ~~~~~~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
...+++||+|++... ..+...+++.+.++|||||++++.++....
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTNKLALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred CCCCCCEEEEEEccchhcCCCHHHHHHHHHHHcCCCCEEEEEEecccc
Confidence 012578999999865 345678999999999999999998776554
No 138
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.48 E-value=1.3e-13 Score=117.35 Aligned_cols=115 Identities=23% Similarity=0.393 Sum_probs=92.1
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
..+.....+...+...++.+|||||||+|..+..+++..+ .+|+++|+++.+++.|+++++..++.+ ++++.+|+..
T Consensus 75 ~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~d~~~ 151 (235)
T 1jg1_A 75 SAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKN-VHVILGDGSK 151 (235)
T ss_dssp CCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEESCGGG
T ss_pred ccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEECCccc
Confidence 3555555666666667788999999999999999999865 799999999999999999999988865 9999999843
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.++. ..+||+|+++....... +.+.+.|+|||.+++.-
T Consensus 152 ~~~~------~~~fD~Ii~~~~~~~~~---~~~~~~L~pgG~lvi~~ 189 (235)
T 1jg1_A 152 GFPP------KAPYDVIIVTAGAPKIP---EPLIEQLKIGGKLIIPV 189 (235)
T ss_dssp CCGG------GCCEEEEEECSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred CCCC------CCCccEEEECCcHHHHH---HHHHHhcCCCcEEEEEE
Confidence 2221 34699999987655433 36788999999999853
No 139
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.48 E-value=8.5e-13 Score=118.84 Aligned_cols=111 Identities=13% Similarity=0.096 Sum_probs=93.2
Q ss_pred cC-CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 118 LG-AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 118 ~~-~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
.+ +.+|||||||+|..+..+++..| +.+++++|+ +.+++.+++++...++.++++++.+|+.+..+.. .+.|
T Consensus 177 ~~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----~~~~ 249 (352)
T 3mcz_A 177 FARARTVIDLAGGHGTYLAQVLRRHP-QLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE-----GGAA 249 (352)
T ss_dssp GTTCCEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT-----TCCE
T ss_pred cCCCCEEEEeCCCcCHHHHHHHHhCC-CCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC-----CCCc
Confidence 44 78999999999999999999987 689999999 8999999999999898888999999997653111 4679
Q ss_pred EEEEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 197 DFAFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 197 DlI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
|+|++....+ .....++.+.+.|+|||.+++.+..++..
T Consensus 250 D~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (352)
T 3mcz_A 250 DVVMLNDCLHYFDAREAREVIGHAAGLVKPGGALLILTMTMNDD 293 (352)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEECCCTT
T ss_pred cEEEEecccccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 9999876422 34678999999999999999988776553
No 140
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.47 E-value=2.3e-13 Score=123.04 Aligned_cols=120 Identities=19% Similarity=0.212 Sum_probs=99.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
.+.+..+..+..++...++.+|||+|||+|..++.++....+..+++|+|+++.+++.|+++++.+|+. +++++++|+.
T Consensus 186 ~l~~~la~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~-~i~~~~~D~~ 264 (354)
T 3tma_A 186 SLTPVLAQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLS-WIRFLRADAR 264 (354)
T ss_dssp SCCHHHHHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCT-TCEEEECCGG
T ss_pred CcCHHHHHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCC-ceEEEeCChh
Confidence 455666666667777777889999999999999999987623689999999999999999999999998 7999999998
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCcc-----------chHHHHHHHHccCCCCcEEEEe
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKR-----------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~-----------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+.... ...||+|++|++.. .+..+++.+.++|+|||.+++-
T Consensus 265 ~~~~~------~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 316 (354)
T 3tma_A 265 HLPRF------FPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALLPPGGRVALL 316 (354)
T ss_dssp GGGGT------CCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTSCTTCEEEEE
T ss_pred hCccc------cCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 75332 35689999987622 1467888899999999999883
No 141
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.47 E-value=3e-13 Score=117.31 Aligned_cols=114 Identities=12% Similarity=0.097 Sum_probs=88.8
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChh------HHHHHHHHHHHhCCCCcEEEEEcC-hhh-HHHHH
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDAR------SLEVAKKYYERAGVSHKVKIKHGL-AAD-SLKAL 187 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~------~~~~a~~~~~~~g~~~~v~~~~gd-~~~-~l~~~ 187 (279)
...++.+|||||||+|..+..+++..++.++|+++|+++. +++.|++++...++.++++++++| ... .++.
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~- 118 (275)
T 3bkx_A 40 QVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTNLSDDLGPI- 118 (275)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCCTTTCCGGG-
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECChhhhccCCC-
Confidence 4457789999999999999999998643689999999997 999999999988887789999998 321 1111
Q ss_pred HhCCCCCcEEEEEEeCCc---cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 188 ILNGEASSYDFAFVDAEK---RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~~---~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
.+++||+|++.... .+...+++.+..+++|||.+++.+....+
T Consensus 119 ----~~~~fD~v~~~~~l~~~~~~~~~~~~~~~l~~~gG~l~~~~~~~~~ 164 (275)
T 3bkx_A 119 ----ADQHFDRVVLAHSLWYFASANALALLFKNMAAVCDHVDVAEWSMQP 164 (275)
T ss_dssp ----TTCCCSEEEEESCGGGSSCHHHHHHHHHHHTTTCSEEEEEEECSSC
T ss_pred ----CCCCEEEEEEccchhhCCCHHHHHHHHHHHhCCCCEEEEEEecCCC
Confidence 15789999987652 33445666777777789999998766543
No 142
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.47 E-value=4.5e-13 Score=117.36 Aligned_cols=119 Identities=18% Similarity=0.175 Sum_probs=92.2
Q ss_pred HHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCC---CcEEEEEcChh
Q 023645 105 PDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS---HKVKIKHGLAA 181 (279)
Q Consensus 105 ~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~---~~v~~~~gd~~ 181 (279)
.....++..++...++.+|||||||+|..+..+++. +.+|+++|+|+.+++.|+++....+.. .++.+..+|+.
T Consensus 43 ~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~ 119 (293)
T 3thr_A 43 AEYKAWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWL 119 (293)
T ss_dssp HHHHHHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGG
T ss_pred HHHHHHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChh
Confidence 444556666666677889999999999999999986 459999999999999999887544332 35789999987
Q ss_pred hHHHHHHhCCCCCcEEEEEEe-CC---ccc-------hHHHHHHHHccCCCCcEEEEeC
Q 023645 182 DSLKALILNGEASSYDFAFVD-AE---KRM-------YQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id-~~---~~~-------~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+....+ ..+++||+|++. .. ..+ ...+++.+.++|||||++++..
T Consensus 120 ~~~~~~---~~~~~fD~V~~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 175 (293)
T 3thr_A 120 TLDKDV---PAGDGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDH 175 (293)
T ss_dssp GHHHHS---CCTTCEEEEEECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred hCcccc---ccCCCeEEEEEcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEe
Confidence 654322 115799999996 32 222 6789999999999999999864
No 143
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.47 E-value=1.3e-13 Score=116.99 Aligned_cols=104 Identities=13% Similarity=0.096 Sum_probs=82.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++..+ .++|+++|+++.+++.++++.+.. .++.++.+|+.+...... . .++||
T Consensus 73 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~---~~v~~~~~d~~~~~~~~~--~-~~~~D 145 (230)
T 1fbn_A 73 KRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER---ENIIPILGDANKPQEYAN--I-VEKVD 145 (230)
T ss_dssp CTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC---TTEEEEECCTTCGGGGTT--T-SCCEE
T ss_pred CCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC---CCeEEEECCCCCcccccc--c-CccEE
Confidence 3567999999999999999999876 689999999999999999887643 569999999875211010 0 36899
Q ss_pred EEEEeCC-ccchHHHHHHHHccCCCCcEEEEe
Q 023645 198 FAFVDAE-KRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 198 lI~id~~-~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+|+.+.. ......+++.+.+.|+|||.+++.
T Consensus 146 ~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 177 (230)
T 1fbn_A 146 VIYEDVAQPNQAEILIKNAKWFLKKGGYGMIA 177 (230)
T ss_dssp EEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence 9997754 333467799999999999999985
No 144
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.47 E-value=2.7e-13 Score=115.49 Aligned_cols=106 Identities=12% Similarity=0.064 Sum_probs=79.7
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||+|||+|+.+..+++.+++.++|+++|+++.+++...+..+.. .++.++++|+....... ...++|
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r---~nv~~i~~Da~~~~~~~---~~~~~~ 147 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR---PNIFPLLADARFPQSYK---SVVENV 147 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC---TTEEEEECCTTCGGGTT---TTCCCE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc---CCeEEEEcccccchhhh---ccccce
Confidence 456789999999999999999998766899999999999875554444332 35999999986431100 014689
Q ss_pred EEEEEeCCccchHHHHH-HHHccCCCCcEEEEe
Q 023645 197 DFAFVDAEKRMYQEYFE-LLLQLIRVGGIIVID 228 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~-~~~~~Lk~gG~lv~d 228 (279)
|+||+|.........+. .+.+.|||||.+++.
T Consensus 148 D~I~~d~a~~~~~~il~~~~~~~LkpGG~lvis 180 (232)
T 3id6_C 148 DVLYVDIAQPDQTDIAIYNAKFFLKVNGDMLLV 180 (232)
T ss_dssp EEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecCCChhHHHHHHHHHHHhCCCCeEEEEE
Confidence 99999987666555554 445599999999985
No 145
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.46 E-value=2.7e-13 Score=115.95 Aligned_cols=111 Identities=10% Similarity=0.142 Sum_probs=90.9
Q ss_pred HHHhhc-CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCC
Q 023645 113 MLVQIL-GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG 191 (279)
Q Consensus 113 ~l~~~~-~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~ 191 (279)
.+.... ++.+|||||||+|+.++.+++..+ ..+|+++|+++.+++.|+++++.+|+.++++++++|..+.+..
T Consensus 14 ~i~~~v~~g~~VlDIGtGsG~l~i~la~~~~-~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~----- 87 (244)
T 3gnl_A 14 KVASYITKNERIADIGSDHAYLPCFAVKNQT-ASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEK----- 87 (244)
T ss_dssp HHHTTCCSSEEEEEETCSTTHHHHHHHHTTS-EEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCG-----
T ss_pred HHHHhCCCCCEEEEECCccHHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCc-----
Confidence 344433 456999999999999999998754 5689999999999999999999999998999999999876431
Q ss_pred CCCcEEEEEEeC-CccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 192 EASSYDFAFVDA-EKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 192 ~~~~fDlI~id~-~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
..+||+|++.+ ...-...+++.....|+++|.+|+.-.
T Consensus 88 -~~~~D~IviagmGg~lI~~IL~~~~~~L~~~~~lIlq~~ 126 (244)
T 3gnl_A 88 -KDAIDTIVIAGMGGTLIRTILEEGAAKLAGVTKLILQPN 126 (244)
T ss_dssp -GGCCCEEEEEEECHHHHHHHHHHTGGGGTTCCEEEEEES
T ss_pred -cccccEEEEeCCchHHHHHHHHHHHHHhCCCCEEEEEcC
Confidence 13599987643 445577888888999999999999754
No 146
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.46 E-value=2.8e-13 Score=123.72 Aligned_cols=114 Identities=18% Similarity=0.295 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHhh-----cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc
Q 023645 104 SPDQAQLLAMLVQI-----LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG 178 (279)
Q Consensus 104 ~~~~~~~l~~l~~~-----~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g 178 (279)
.+....++..+... .++.+|||+|||+|..+..+++. +.+|+++|+++.+++.|+++++.+++. ++++++
T Consensus 213 d~~t~~ll~~l~~~l~~~~~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~--v~~~~~ 287 (381)
T 3dmg_A 213 DPASLLLLEALQERLGPEGVRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK--AQALHS 287 (381)
T ss_dssp CHHHHHHHHHHHHHHCTTTTTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC--CEEEEC
T ss_pred CHHHHHHHHHHHHhhcccCCCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC--eEEEEc
Confidence 34444455555443 25679999999999999999986 469999999999999999999988874 899999
Q ss_pred ChhhHHHHHHhCCCCCcEEEEEEeCCc--------cchHHHHHHHHccCCCCcEEEEe
Q 023645 179 LAADSLKALILNGEASSYDFAFVDAEK--------RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 179 d~~~~l~~~~~~~~~~~fDlI~id~~~--------~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|+.+.... +++||+|+++.+. .....+++.+.+.|+|||.+++.
T Consensus 288 D~~~~~~~------~~~fD~Ii~npp~~~~~~~~~~~~~~~l~~~~~~LkpGG~l~iv 339 (381)
T 3dmg_A 288 DVDEALTE------EARFDIIVTNPPFHVGGAVILDVAQAFVNVAAARLRPGGVFFLV 339 (381)
T ss_dssp STTTTSCT------TCCEEEEEECCCCCTTCSSCCHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred chhhcccc------CCCeEEEEECCchhhcccccHHHHHHHHHHHHHhcCcCcEEEEE
Confidence 99765321 3799999998542 33567899999999999999984
No 147
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.46 E-value=2.7e-13 Score=113.18 Aligned_cols=110 Identities=16% Similarity=0.186 Sum_probs=88.0
Q ss_pred HHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHH
Q 023645 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 108 ~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
..++..+....++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++ .+. .+++++++|+.+..
T Consensus 35 ~~~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~-~~~~~~~~d~~~~~--- 103 (218)
T 3ou2_A 35 PAALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGL-DNVEFRQQDLFDWT--- 103 (218)
T ss_dssp HHHHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCC-TTEEEEECCTTSCC---
T ss_pred HHHHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCC-CCeEEEecccccCC---
Confidence 344455555666789999999999999999987 4699999999999999988 444 35999999997651
Q ss_pred HhCCCCCcEEEEEEeCCccc-----hHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 188 ILNGEASSYDFAFVDAEKRM-----YQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~~~~-----~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
.+++||+|++...... ...+++.+.++|+|||.+++.+...
T Consensus 104 ----~~~~~D~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 104 ----PDRQWDAVFFAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp ----CSSCEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred ----CCCceeEEEEechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 1689999999765322 3678999999999999999976643
No 148
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.46 E-value=1e-12 Score=119.46 Aligned_cols=107 Identities=14% Similarity=0.152 Sum_probs=91.2
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|+.+.. ...||
T Consensus 201 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--------p~~~D 270 (369)
T 3gwz_A 201 SGAATAVDIGGGRGSLMAAVLDAFP-GLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI--------PDGAD 270 (369)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC--------CSSCS
T ss_pred ccCcEEEEeCCCccHHHHHHHHHCC-CCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC--------CCCce
Confidence 4568999999999999999999987 789999999 9999999999999998889999999997322 23799
Q ss_pred EEEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 198 FAFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 198 lI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
+|++..... .....++.+.+.|+|||.+++.+..++.
T Consensus 271 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 312 (369)
T 3gwz_A 271 VYLIKHVLHDWDDDDVVRILRRIATAMKPDSRLLVIDNLIDE 312 (369)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEEBCCS
T ss_pred EEEhhhhhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 999876522 2336899999999999999998877655
No 149
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.46 E-value=2.4e-13 Score=112.57 Aligned_cols=102 Identities=16% Similarity=0.182 Sum_probs=84.3
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...+. +++++++|+.+.. . .+++||+|+
T Consensus 31 ~~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~--~----~~~~fD~v~ 99 (202)
T 2kw5_A 31 GKILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV--KITTVQSNLADFD--I----VADAWEGIV 99 (202)
T ss_dssp SEEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC--CEEEECCBTTTBS--C----CTTTCSEEE
T ss_pred CCEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC--ceEEEEcChhhcC--C----CcCCccEEE
Confidence 39999999999999999875 46999999999999999999988776 5999999987541 1 147899999
Q ss_pred EeCC---ccchHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 201 VDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 201 id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
+... ......+++.+.++|+|||.+++......
T Consensus 100 ~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~ 135 (202)
T 2kw5_A 100 SIFCHLPSSLRQQLYPKVYQGLKPGGVFILEGFAPE 135 (202)
T ss_dssp EECCCCCHHHHHHHHHHHHTTCCSSEEEEEEEECTT
T ss_pred EEhhcCCHHHHHHHHHHHHHhcCCCcEEEEEEeccc
Confidence 8643 23567789999999999999999865543
No 150
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.45 E-value=3.6e-13 Score=114.35 Aligned_cols=109 Identities=12% Similarity=0.152 Sum_probs=87.8
Q ss_pred HHHHHHHHhhc--CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHH
Q 023645 108 AQLLAMLVQIL--GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLK 185 (279)
Q Consensus 108 ~~~l~~l~~~~--~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~ 185 (279)
...+..++... ++.+|||||||+|..+..+++. +.+++++|+++.+++.+++++...+. +++++++|+.+...
T Consensus 24 ~~~~~~~l~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~~ 98 (246)
T 1y8c_A 24 SDFIIEKCVENNLVFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL--KPRLACQDISNLNI 98 (246)
T ss_dssp HHHHHHHHHTTTCCTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC--CCEEECCCGGGCCC
T ss_pred HHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC--CeEEEecccccCCc
Confidence 34444444433 6789999999999999999886 46999999999999999999987765 58999999875421
Q ss_pred HHHhCCCCCcEEEEEEeC-Cc------cchHHHHHHHHccCCCCcEEEEe
Q 023645 186 ALILNGEASSYDFAFVDA-EK------RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 186 ~~~~~~~~~~fDlI~id~-~~------~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.++||+|++.. .. .+...+++.+.++|+|||.++++
T Consensus 99 -------~~~fD~v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 141 (246)
T 1y8c_A 99 -------NRKFDLITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIFD 141 (246)
T ss_dssp -------SCCEEEEEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEEE
T ss_pred -------cCCceEEEEcCccccccCCHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 37899999976 31 45678899999999999999984
No 151
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.45 E-value=1.1e-13 Score=119.84 Aligned_cols=94 Identities=18% Similarity=0.203 Sum_probs=76.1
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
..+|||||||+|..+..++.. ..+|+|+|+|+.+++.|++ ..+++++++|+.+.. + .+++||+|
T Consensus 40 ~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~-------~~~v~~~~~~~e~~~--~----~~~sfD~v 103 (257)
T 4hg2_A 40 RGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR-------HPRVTYAVAPAEDTG--L----PPASVDVA 103 (257)
T ss_dssp SSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC-------CTTEEEEECCTTCCC--C----CSSCEEEE
T ss_pred CCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh-------cCCceeehhhhhhhc--c----cCCcccEE
Confidence 468999999999999999976 3699999999999877653 246999999996541 1 26899999
Q ss_pred EEeCC--ccchHHHHHHHHccCCCCcEEEEeC
Q 023645 200 FVDAE--KRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 200 ~id~~--~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
++... .-+...++.++.++|||||+|++-.
T Consensus 104 ~~~~~~h~~~~~~~~~e~~rvLkpgG~l~~~~ 135 (257)
T 4hg2_A 104 IAAQAMHWFDLDRFWAELRRVARPGAVFAAVT 135 (257)
T ss_dssp EECSCCTTCCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEeeehhHhhHHHHHHHHHHHcCCCCEEEEEE
Confidence 98654 3346789999999999999998743
No 152
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.45 E-value=3.2e-13 Score=114.24 Aligned_cols=112 Identities=18% Similarity=0.236 Sum_probs=89.0
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
..+.....+...+...++.+|||||||+|..+..+++.. .+|+++|+++.+++.+++++...+ +++++.+|+.+
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~---~v~~~~~d~~~ 127 (231)
T 1vbf_A 54 TALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN---NIKLILGDGTL 127 (231)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS---SEEEEESCGGG
T ss_pred CCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC---CeEEEECCccc
Confidence 345555555555566677899999999999999999874 699999999999999999987655 69999999976
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.++. .++||+|+++....... +.+.+.|+|||.+++..
T Consensus 128 ~~~~------~~~fD~v~~~~~~~~~~---~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 128 GYEE------EKPYDRVVVWATAPTLL---CKPYEQLKEGGIMILPI 165 (231)
T ss_dssp CCGG------GCCEEEEEESSBBSSCC---HHHHHTEEEEEEEEEEE
T ss_pred cccc------CCCccEEEECCcHHHHH---HHHHHHcCCCcEEEEEE
Confidence 3321 47899999987655432 46889999999999864
No 153
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.45 E-value=2.8e-13 Score=123.49 Aligned_cols=106 Identities=13% Similarity=0.172 Sum_probs=88.5
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
...++++|||||||+|..+..+++.. ..+|+++|++ .+++.|+++++..++.++++++++|+.+... .++
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g--~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~ 129 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAG--ARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISL-------PEK 129 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTT--CSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCC-------SSC
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcC--CCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCc-------CCc
Confidence 34567899999999999999999862 3499999999 9999999999999999899999999976421 378
Q ss_pred EEEEEEeCC------ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 196 YDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 196 fDlI~id~~------~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
||+|+++.. ......++..+.++|+|||+++++...
T Consensus 130 ~D~Iv~~~~~~~l~~e~~~~~~l~~~~~~LkpgG~li~~~~~ 171 (376)
T 3r0q_C 130 VDVIISEWMGYFLLRESMFDSVISARDRWLKPTGVMYPSHAR 171 (376)
T ss_dssp EEEEEECCCBTTBTTTCTHHHHHHHHHHHEEEEEEEESSEEE
T ss_pred ceEEEEcChhhcccchHHHHHHHHHHHhhCCCCeEEEEecCe
Confidence 999998652 134667888889999999999986654
No 154
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.45 E-value=3.2e-13 Score=114.68 Aligned_cols=103 Identities=17% Similarity=0.137 Sum_probs=82.6
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCc
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASS 195 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~ 195 (279)
.++.+|||+|||+|..+..+++..++.++|+++|+++.+++.+.++.+.. .+++++++|+.+. ++.. .++
T Consensus 76 ~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~---~~v~~~~~d~~~~~~~~~~-----~~~ 147 (233)
T 2ipx_A 76 KPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR---TNIIPVIEDARHPHKYRML-----IAM 147 (233)
T ss_dssp CTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC---TTEEEECSCTTCGGGGGGG-----CCC
T ss_pred CCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc---CCeEEEEcccCChhhhccc-----CCc
Confidence 45679999999999999999998744689999999999888887777654 4699999999763 2222 578
Q ss_pred EEEEEEeCCccc-hHHHHHHHHccCCCCcEEEEe
Q 023645 196 YDFAFVDAEKRM-YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 196 fDlI~id~~~~~-~~~~l~~~~~~Lk~gG~lv~d 228 (279)
||+|+++....+ ...++..+.+.|+|||.+++.
T Consensus 148 ~D~V~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~ 181 (233)
T 2ipx_A 148 VDVIFADVAQPDQTRIVALNAHTFLRNGGHFVIS 181 (233)
T ss_dssp EEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEEEcCCCccHHHHHHHHHHHHcCCCeEEEEE
Confidence 999999876333 345578899999999999994
No 155
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.45 E-value=2.8e-13 Score=122.33 Aligned_cols=106 Identities=17% Similarity=0.190 Sum_probs=88.1
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
...++++|||||||+|..+..+++. + ..+|+|+|++ ++++.|+++++..++.++++++++|+.+.. + ..++
T Consensus 63 ~~~~~~~VLDvGcG~G~~~~~la~~-g-~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~--~----~~~~ 133 (349)
T 3q7e_A 63 HLFKDKVVLDVGSGTGILCMFAAKA-G-ARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVE--L----PVEK 133 (349)
T ss_dssp HHHTTCEEEEESCTTSHHHHHHHHT-T-CSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCC--C----SSSC
T ss_pred ccCCCCEEEEEeccchHHHHHHHHC-C-CCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHcc--C----CCCc
Confidence 3467889999999999999999987 3 4699999999 599999999999999888999999997651 1 1479
Q ss_pred EEEEEEeCC------ccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 196 YDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 196 fDlI~id~~------~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
||+|+++.. ......++..+.++|||||+++.+..
T Consensus 134 fD~Iis~~~~~~l~~~~~~~~~l~~~~r~LkpgG~li~~~~ 174 (349)
T 3q7e_A 134 VDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIFPDRA 174 (349)
T ss_dssp EEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEESCEE
T ss_pred eEEEEEccccccccCchhHHHHHHHHHHhCCCCCEEccccc
Confidence 999998642 34567788888999999999985443
No 156
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.45 E-value=4.5e-13 Score=110.94 Aligned_cols=109 Identities=16% Similarity=0.092 Sum_probs=86.5
Q ss_pred HHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHH
Q 023645 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 108 ~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
..++..+.... +.+|||+|||+|..+..+++. +.+|+++|+++.+++.++++. .+++++++|+.+.. .
T Consensus 31 ~~~l~~~~~~~-~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~--~ 98 (203)
T 3h2b_A 31 RVLIEPWATGV-DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQTH------PSVTFHHGTITDLS--D 98 (203)
T ss_dssp HHHHHHHHHHC-CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHHC------TTSEEECCCGGGGG--G
T ss_pred HHHHHHHhccC-CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHhC------CCCeEEeCcccccc--c
Confidence 34445544433 779999999999999999986 469999999999999998863 25899999997642 1
Q ss_pred HhCCCCCcEEEEEEeCC-----ccchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 188 ILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
.+++||+|++... ..+...+++.+.++|+|||.+++.....
T Consensus 99 ----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 144 (203)
T 3h2b_A 99 ----SPKRWAGLLAWYSLIHMGPGELPDALVALRMAVEDGGGLLMSFFSG 144 (203)
T ss_dssp ----SCCCEEEEEEESSSTTCCTTTHHHHHHHHHHTEEEEEEEEEEEECC
T ss_pred ----CCCCeEEEEehhhHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEccC
Confidence 1579999998754 2367889999999999999999976543
No 157
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.45 E-value=1.6e-13 Score=115.01 Aligned_cols=110 Identities=19% Similarity=0.155 Sum_probs=86.1
Q ss_pred HHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHH
Q 023645 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALI 188 (279)
Q Consensus 109 ~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~ 188 (279)
.++..+. ..++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++. .+++++++|+.+...
T Consensus 36 ~~l~~~~-~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~-----~~~~~~~~d~~~~~~--- 103 (220)
T 3hnr_A 36 DILEDVV-NKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP-----KEFSITEGDFLSFEV--- 103 (220)
T ss_dssp HHHHHHH-HTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC-----TTCCEESCCSSSCCC---
T ss_pred HHHHHhh-ccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC-----CceEEEeCChhhcCC---
Confidence 3444333 347789999999999999999986 5799999999999999988764 468999999875421
Q ss_pred hCCCCCcEEEEEEeCCccc---h--HHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 189 LNGEASSYDFAFVDAEKRM---Y--QEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 189 ~~~~~~~fDlI~id~~~~~---~--~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
.++||+|++...... . ..+++.+.+.|||||.+++.+..+..
T Consensus 104 ----~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 150 (220)
T 3hnr_A 104 ----PTSIDTIVSTYAFHHLTDDEKNVAIAKYSQLLNKGGKIVFADTIFAD 150 (220)
T ss_dssp ----CSCCSEEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEEECBSS
T ss_pred ----CCCeEEEEECcchhcCChHHHHHHHHHHHHhcCCCCEEEEEeccccC
Confidence 378999999865322 2 23899999999999999998765543
No 158
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.45 E-value=3.7e-14 Score=123.14 Aligned_cols=96 Identities=10% Similarity=0.119 Sum_probs=79.6
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh--CC-CCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GV-SHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~-~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
.+++|||||||+|..+..+++. + .+|+++|+++++++.|++++... ++ .++++++.+|+.+.+ ++
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~-~--~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~---------~~ 139 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKY-D--THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI---------KK 139 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTS-S--CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC---------CC
T ss_pred CCCEEEEEeCCcCHHHHHHHhC-C--CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH---------hh
Confidence 5679999999999999999886 4 79999999999999999876431 12 357999999997542 57
Q ss_pred EEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 196 YDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 196 fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
||+|++|.... ..+++.+.+.|+|||++++.
T Consensus 140 fD~Ii~d~~dp--~~~~~~~~~~L~pgG~lv~~ 170 (262)
T 2cmg_A 140 YDLIFCLQEPD--IHRIDGLKRMLKEDGVFISV 170 (262)
T ss_dssp EEEEEESSCCC--HHHHHHHHTTEEEEEEEEEE
T ss_pred CCEEEECCCCh--HHHHHHHHHhcCCCcEEEEE
Confidence 99999996533 35899999999999999985
No 159
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.44 E-value=2e-13 Score=117.03 Aligned_cols=99 Identities=13% Similarity=0.186 Sum_probs=82.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++..+ .+|+++|+++.+++.|+++.. ..+++++++|+.+.. . .+++||
T Consensus 43 ~~~~~vLD~GcG~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~-~-----~~~~fD 110 (253)
T 3g5l_A 43 FNQKTVLDLGCGFGWHCIYAAEHGA--KKVLGIDLSERMLTEAKRKTT----SPVVCYEQKAIEDIA-I-----EPDAYN 110 (253)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC--SEEEEEESCHHHHHHHHHHCC----CTTEEEEECCGGGCC-C-----CTTCEE
T ss_pred cCCCEEEEECCCCCHHHHHHHHcCC--CEEEEEECCHHHHHHHHHhhc----cCCeEEEEcchhhCC-C-----CCCCeE
Confidence 4678999999999999999998743 399999999999999998765 356999999996532 1 157999
Q ss_pred EEEEeCC---ccchHHHHHHHHccCCCCcEEEEe
Q 023645 198 FAFVDAE---KRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 198 lI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+|++... ..+...+++.+.++|+|||.+++.
T Consensus 111 ~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~ 144 (253)
T 3g5l_A 111 VVLSSLALHYIASFDDICKKVYINLKSSGSFIFS 144 (253)
T ss_dssp EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEchhhhhhhhHHHHHHHHHHHcCCCcEEEEE
Confidence 9999765 345778999999999999999996
No 160
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.44 E-value=7.6e-14 Score=119.91 Aligned_cols=109 Identities=17% Similarity=0.207 Sum_probs=83.0
Q ss_pred CCCEEEEEcCccCHHHHHHHHH--CCCCCEEEEEeCChhHHHHHHHHHHHh---CCCCc---------------------
Q 023645 119 GAQRCIEVGVYTGYSSLAIALV--LPESGCLVACERDARSLEVAKKYYERA---GVSHK--------------------- 172 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~--~~~~~~v~~iD~s~~~~~~a~~~~~~~---g~~~~--------------------- 172 (279)
++.+|||+|||+|..+..+++. .+ +.+|+|+|+++.+++.|++++... ++.++
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~-~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRS-LRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGG-EEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccC-CCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 4569999999999999999987 43 579999999999999999988765 44333
Q ss_pred ----EE-------------EEEcChhhHHHHHHhCCCCCcEEEEEEeCCc------------cchHHHHHHHHccCCCCc
Q 023645 173 ----VK-------------IKHGLAADSLKALILNGEASSYDFAFVDAEK------------RMYQEYFELLLQLIRVGG 223 (279)
Q Consensus 173 ----v~-------------~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~------------~~~~~~l~~~~~~Lk~gG 223 (279)
++ ++++|+.+..+..... ...+||+|+++.+. ..+..+++.+.++|+|||
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-~~~~fD~Iv~npp~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG 208 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVL-AGSAPDVVLTDLPYGERTHWEGQVPGQPVAGLLRSLASALPAHA 208 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHH-TTCCCSEEEEECCGGGSSSSSSCCCHHHHHHHHHHHHHHSCTTC
T ss_pred hhhhhhhhccccccccccceeeccccccccccccc-CCCCceEEEeCCCeeccccccccccccHHHHHHHHHHHhcCCCc
Confidence 66 9999987643210000 03589999998642 234578999999999999
Q ss_pred EEEEeC
Q 023645 224 IIVIDN 229 (279)
Q Consensus 224 ~lv~dd 229 (279)
++++.+
T Consensus 209 ~l~~~~ 214 (250)
T 1o9g_A 209 VIAVTD 214 (250)
T ss_dssp EEEEEE
T ss_pred EEEEeC
Confidence 999843
No 161
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.44 E-value=6.6e-13 Score=120.39 Aligned_cols=111 Identities=14% Similarity=0.119 Sum_probs=91.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|+.+....+ .++||
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~-----p~~~D 250 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYNK-EVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPF-----PTGFD 250 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHST-TCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCC-----CCCCS
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCC-----CCCcC
Confidence 4678999999999999999999987 689999999 9999999999998888788999999997531001 36899
Q ss_pred EEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 198 FAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 198 lI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
+|++.... +....+++++.+.|+|||.|++.+..++..
T Consensus 251 ~v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (363)
T 3dp7_A 251 AVWMSQFLDCFSEEEVISILTRVAQSIGKDSKVYIMETLWDRQ 293 (363)
T ss_dssp EEEEESCSTTSCHHHHHHHHHHHHHHCCTTCEEEEEECCTTSC
T ss_pred EEEEechhhhCCHHHHHHHHHHHHHhcCCCcEEEEEeeccCCc
Confidence 99986542 234577999999999999999988776553
No 162
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.44 E-value=1.7e-12 Score=115.81 Aligned_cols=108 Identities=16% Similarity=0.266 Sum_probs=90.4
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++..| +.+++++|++ .+++.|++++...++.++++++.+|+.+. .. .+.||
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~-----~~~~D 234 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNP-NAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEV--DY-----GNDYD 234 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCT-TCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTS--CC-----CSCEE
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccC--CC-----CCCCc
Confidence 5668999999999999999999986 6799999999 99999999999999888899999999753 11 34599
Q ss_pred EEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 198 FAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 198 lI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
+|++.... .....+++.+.+.|+|||.+++.+...+.
T Consensus 235 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 276 (335)
T 2r3s_A 235 LVLLPNFLHHFDVATCEQLLRKIKTALAVEGKVIVFDFIPNS 276 (335)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECCCCT
T ss_pred EEEEcchhccCCHHHHHHHHHHHHHhCCCCcEEEEEeecCCC
Confidence 99986542 33468899999999999988887766543
No 163
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.44 E-value=3.5e-13 Score=111.92 Aligned_cols=115 Identities=14% Similarity=0.154 Sum_probs=89.0
Q ss_pred HHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHH
Q 023645 107 QAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA 186 (279)
Q Consensus 107 ~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~ 186 (279)
...++..+....++.+|||+|||+|..+..++... +.+|+++|+++.+++.+++++...+. +++++++|+.+..
T Consensus 11 ~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~~~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~--~~~~~~~d~~~~~-- 84 (209)
T 2p8j_A 11 LYRFLKYCNESNLDKTVLDCGAGGDLPPLSIFVED--GYKTYGIEISDLQLKKAENFSRENNF--KLNISKGDIRKLP-- 84 (209)
T ss_dssp HHHHHHHHHHSSSCSEEEEESCCSSSCTHHHHHHT--TCEEEEEECCHHHHHHHHHHHHHHTC--CCCEEECCTTSCC--
T ss_pred HHHHHHHHhccCCCCEEEEECCCCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHhcCC--ceEEEECchhhCC--
Confidence 34455555555677899999999999865554442 57999999999999999999887663 5889999987531
Q ss_pred HHhCCCCCcEEEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 187 LILNGEASSYDFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 187 ~~~~~~~~~fDlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
. .+++||+|++.... .+...+++.+.+.|+|||++++....
T Consensus 85 ~----~~~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 130 (209)
T 2p8j_A 85 F----KDESMSFVYSYGTIFHMRKNDVKEAIDEIKRVLKPGGLACINFLT 130 (209)
T ss_dssp S----CTTCEEEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred C----CCCceeEEEEcChHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence 1 14789999986542 45678899999999999999997654
No 164
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.44 E-value=3e-13 Score=112.79 Aligned_cols=98 Identities=14% Similarity=0.178 Sum_probs=81.0
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++ +++++.+|+.+.. . +++|
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-------~~~~~~~d~~~~~--~-----~~~f 103 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL-------GRPVRTMLFHQLD--A-----IDAY 103 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH-------TSCCEECCGGGCC--C-----CSCE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc-------CCceEEeeeccCC--C-----CCcE
Confidence 345779999999999999999986 469999999999999999887 2677888886543 1 6899
Q ss_pred EEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 197 DFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 197 DlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
|+|++.... .....+++.+.++|+|||++++....
T Consensus 104 D~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 143 (211)
T 3e23_A 104 DAVWAHACLLHVPRDELADVLKLIWRALKPGGLFYASYKS 143 (211)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEecCchhhcCHHHHHHHHHHHHHhcCCCcEEEEEEcC
Confidence 999997652 25568899999999999999997443
No 165
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.44 E-value=2e-13 Score=115.52 Aligned_cols=116 Identities=18% Similarity=0.235 Sum_probs=88.0
Q ss_pred CHHHH-HHHHHHH-hhcCCCEEEEEcCccCHHHHHHHHHCCC-----CCEEEEEeCChhHHHHHHHHHHHhCC----CCc
Q 023645 104 SPDQA-QLLAMLV-QILGAQRCIEVGVYTGYSSLAIALVLPE-----SGCLVACERDARSLEVAKKYYERAGV----SHK 172 (279)
Q Consensus 104 ~~~~~-~~l~~l~-~~~~~~~VLEiG~G~G~~t~~la~~~~~-----~~~v~~iD~s~~~~~~a~~~~~~~g~----~~~ 172 (279)
.+... .++..+. ...++.+|||||||+|+.+..+++..+. .++|+++|+++++++.|++++...+. ..+
T Consensus 67 ~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~ 146 (227)
T 1r18_A 67 APHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQ 146 (227)
T ss_dssp CHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred ChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCc
Confidence 44433 3333333 3456789999999999999999986542 25999999999999999999887652 235
Q ss_pred EEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 173 VKIKHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 173 v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
++++.+|..+.++. .++||+|+++...... .+.+.+.|+|||.+++.
T Consensus 147 v~~~~~d~~~~~~~------~~~fD~I~~~~~~~~~---~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 147 LLIVEGDGRKGYPP------NAPYNAIHVGAAAPDT---PTELINQLASGGRLIVP 193 (227)
T ss_dssp EEEEESCGGGCCGG------GCSEEEEEECSCBSSC---CHHHHHTEEEEEEEEEE
T ss_pred eEEEECCcccCCCc------CCCccEEEECCchHHH---HHHHHHHhcCCCEEEEE
Confidence 99999999763321 3689999998875543 36788999999999985
No 166
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.43 E-value=6.7e-13 Score=116.10 Aligned_cols=106 Identities=11% Similarity=0.045 Sum_probs=87.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++. + ..+|+++|+++.+++.|++++...+...+++++++|+.+.... .+++||
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-----~~~~fD 135 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-G-IGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMD-----LGKEFD 135 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-T-CSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCC-----CSSCEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-C-CCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccC-----CCCCcC
Confidence 46789999999999999998876 2 4599999999999999999999888777899999999754100 157899
Q ss_pred EEEEeCCc-------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 198 FAFVDAEK-------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 198 lI~id~~~-------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+|++.... .+...+++.+.++|+|||.+++...
T Consensus 136 ~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 175 (298)
T 1ri5_A 136 VISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMTVP 175 (298)
T ss_dssp EEEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEECchhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 99987553 3456789999999999999998653
No 167
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.43 E-value=2.6e-12 Score=116.48 Aligned_cols=104 Identities=19% Similarity=0.180 Sum_probs=88.2
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++..+ +.+++++|+ +.+++.|++++...++.++++++.+|+.+.+ ...|
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~ 249 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAP-HLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL--------PVTA 249 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------SCCE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCC-CCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC--------CCCC
Confidence 34678999999999999999999986 689999999 9999999999999898878999999987532 2359
Q ss_pred EEEEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCC
Q 023645 197 DFAFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 197 DlI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
|+|++..... ....+++.+.+.|+|||.+++.+.
T Consensus 250 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 250 DVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CEEEEeccccCCCHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 9999876532 224789999999999999888766
No 168
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.43 E-value=7.8e-13 Score=119.34 Aligned_cols=104 Identities=13% Similarity=0.140 Sum_probs=85.8
Q ss_pred HhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
....++++|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++.+++.++++++++|+.+.. + .+
T Consensus 46 l~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~--~-----~~ 115 (348)
T 2y1w_A 46 HTDFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L-----PE 115 (348)
T ss_dssp GGGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C-----SS
T ss_pred cccCCcCEEEEcCCCccHHHHHHHhC-C-CCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCC--C-----CC
Confidence 34457789999999999999999885 3 46999999996 88999999999999888999999997641 1 36
Q ss_pred cEEEEEEeCC-----ccchHHHHHHHHccCCCCcEEEEe
Q 023645 195 SYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 195 ~fDlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+||+|++... .+.....+..+.++|+|||++++.
T Consensus 116 ~~D~Ivs~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~ 154 (348)
T 2y1w_A 116 QVDIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFPT 154 (348)
T ss_dssp CEEEEEECCCBTTBTTTSHHHHHHHGGGGEEEEEEEESC
T ss_pred ceeEEEEeCchhcCChHHHHHHHHHHHhhcCCCeEEEEe
Confidence 8999998753 244567788889999999999854
No 169
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.42 E-value=4.1e-13 Score=115.86 Aligned_cols=98 Identities=16% Similarity=0.154 Sum_probs=80.7
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++. +++++++|+.+... +++||+
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~------~~~~~~~d~~~~~~-------~~~fD~ 113 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP------DAVLHHGDMRDFSL-------GRRFSA 113 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTCCC-------SCCEEE
T ss_pred CCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC------CCEEEECChHHCCc-------cCCcCE
Confidence 4579999999999999999876 4599999999999999998753 58999999976421 478999
Q ss_pred EEEeC-Cc------cchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 199 AFVDA-EK------RMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 199 I~id~-~~------~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
|++.. .. .....+++.+.++|+|||.++++....
T Consensus 114 v~~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 154 (263)
T 3pfg_A 114 VTCMFSSIGHLAGQAELDAALERFAAHVLPDGVVVVEPWWF 154 (263)
T ss_dssp EEECTTGGGGSCHHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred EEEcCchhhhcCCHHHHHHHHHHHHHhcCCCcEEEEEeccC
Confidence 99976 32 345678999999999999999986433
No 170
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.42 E-value=6.9e-13 Score=111.45 Aligned_cols=102 Identities=12% Similarity=0.146 Sum_probs=84.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||+|||+|..+..+++..+ +++++|+++.+++.|++++...+ .+++++++|+.+.. . .+++||+
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~---~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~--~----~~~~~D~ 106 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF---EVVGVDISEDMIRKAREYAKSRE--SNVEFIVGDARKLS--F----EDKTFDY 106 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC---EEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCTTSCC--S----CTTCEEE
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC---EEEEEECCHHHHHHHHHHHHhcC--CCceEEECchhcCC--C----CCCcEEE
Confidence 467999999999999999988743 99999999999999999998766 46999999987531 1 1468999
Q ss_pred EEEeCC--c---cchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 199 AFVDAE--K---RMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 199 I~id~~--~---~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
|++... . .+...+++.+.++|+|||.+++.+..
T Consensus 107 v~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 107 VIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp EEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEcCchHhCCHHHHHHHHHHHHHHcCCCcEEEEEecC
Confidence 998765 2 24567899999999999999987654
No 171
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.42 E-value=2.6e-13 Score=116.42 Aligned_cols=98 Identities=14% Similarity=0.124 Sum_probs=82.8
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++..| +++++++|+++.+++.++++ ..+++++++|+.+.. . +++||
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~~D~s~~~~~~a~~~------~~~~~~~~~d~~~~~--~-----~~~fD 97 (259)
T 2p35_A 32 ERVLNGYDLGCGPGNSTELLTDRYG-VNVITGIDSDDDMLEKAADR------LPNTNFGKADLATWK--P-----AQKAD 97 (259)
T ss_dssp SCCSSEEEETCTTTHHHHHHHHHHC-TTSEEEEESCHHHHHHHHHH------STTSEEEECCTTTCC--C-----SSCEE
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHh------CCCcEEEECChhhcC--c-----cCCcC
Confidence 4567999999999999999999876 67999999999999999887 135899999987543 1 57899
Q ss_pred EEEEeCC---ccchHHHHHHHHccCCCCcEEEEeC
Q 023645 198 FAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 198 lI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+|++... ..+...+++.+.++|+|||.+++..
T Consensus 98 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 132 (259)
T 2p35_A 98 LLYANAVFQWVPDHLAVLSQLMDQLESGGVLAVQM 132 (259)
T ss_dssp EEEEESCGGGSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred EEEEeCchhhCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence 9999765 3456788999999999999999965
No 172
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.42 E-value=7.9e-13 Score=118.95 Aligned_cols=105 Identities=14% Similarity=0.146 Sum_probs=85.8
Q ss_pred HHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 114 LVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
.....++++|||||||+|..+..+++. + ..+|+++|+++ +++.|+++++..++.++++++++|+.+.. + ..
T Consensus 59 ~~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~----~~ 129 (340)
T 2fyt_A 59 NPHIFKDKVVLDVGCGTGILSMFAAKA-G-AKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVH--L----PV 129 (340)
T ss_dssp CGGGTTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSC--C----SC
T ss_pred hhhhcCCCEEEEeeccCcHHHHHHHHc-C-CCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhc--C----CC
Confidence 334567789999999999999999986 3 36999999996 99999999999999778999999997641 1 14
Q ss_pred CcEEEEEEeCC------ccchHHHHHHHHccCCCCcEEEE
Q 023645 194 SSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 194 ~~fDlI~id~~------~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
++||+|+++.. ......++..+.++|||||.++.
T Consensus 130 ~~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~lip 169 (340)
T 2fyt_A 130 EKVDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVYP 169 (340)
T ss_dssp SCEEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEES
T ss_pred CcEEEEEEcCchhhccCHHHHHHHHHHHHhhcCCCcEEEc
Confidence 78999998651 23456788888999999999984
No 173
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.42 E-value=3.1e-13 Score=115.12 Aligned_cols=98 Identities=14% Similarity=0.127 Sum_probs=80.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++. +.+|+++|+++.+++.++++ ++++.+|+.+.+..+ .+++||
T Consensus 40 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~---------~~~~~~d~~~~~~~~----~~~~fD 103 (240)
T 3dli_A 40 KGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK---------FNVVKSDAIEYLKSL----PDKYLD 103 (240)
T ss_dssp TTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT---------SEEECSCHHHHHHTS----CTTCBS
T ss_pred cCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh---------cceeeccHHHHhhhc----CCCCee
Confidence 45689999999999999999987 46899999999999988774 688999987765332 157999
Q ss_pred EEEEeCC-----ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 198 FAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 198 lI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+|++... ..+...+++.+.++|||||.+++....
T Consensus 104 ~i~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 104 GVMISHFVEHLDPERLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EEEEESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EEEECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 9998764 224578999999999999999997654
No 174
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.42 E-value=6.6e-13 Score=114.08 Aligned_cols=101 Identities=23% Similarity=0.212 Sum_probs=83.0
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++ .+...+++++++|+.+.. + .+++|
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~--~~~~~~~~~~~~d~~~~~--~----~~~~f 105 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI--AGVDRKVQVVQADARAIP--L----PDESV 105 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT--TTSCTTEEEEESCTTSCC--S----CTTCE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh--hccCCceEEEEcccccCC--C----CCCCe
Confidence 346789999999999999999975 479999999999999999987 233456999999996532 1 15789
Q ss_pred EEEEEeCCc---cchHHHHHHHHccCCCCcEEEEe
Q 023645 197 DFAFVDAEK---RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 197 DlI~id~~~---~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|+|++.... .+...+++.+.++|+|||.+++.
T Consensus 106 D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~ 140 (263)
T 2yqz_A 106 HGVIVVHLWHLVPDWPKVLAEAIRVLKPGGALLEG 140 (263)
T ss_dssp EEEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEECCchhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence 999987652 34678999999999999999986
No 175
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.42 E-value=1.6e-13 Score=118.03 Aligned_cols=121 Identities=17% Similarity=0.159 Sum_probs=85.1
Q ss_pred HHHHHHHHHHHhhc-----CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC
Q 023645 105 PDQAQLLAMLVQIL-----GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (279)
Q Consensus 105 ~~~~~~l~~l~~~~-----~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (279)
+....++..++... ++.+|||+|||+|..+..++...+ +.+|+++|+++.+++.|+++++..++.++++++++|
T Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d 124 (254)
T 2h00_A 46 LNYIHWVEDLIGHQDSDKSTLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVP 124 (254)
T ss_dssp HHHHHHHHHHHCCCCGGGCCCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECC
T ss_pred HHHHHHHHHHHhhccccCCCCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcc
Confidence 45555666665433 467999999999999999988765 579999999999999999999999998889999999
Q ss_pred hhhH-HHHHHhCCCCCcEEEEEEeCCccch------------------HHHHHHHHccCCCCcEEEE
Q 023645 180 AADS-LKALILNGEASSYDFAFVDAEKRMY------------------QEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 180 ~~~~-l~~~~~~~~~~~fDlI~id~~~~~~------------------~~~l~~~~~~Lk~gG~lv~ 227 (279)
+.+. ...+.. ..+++||+|+++.+.... ...+..+.++|||||.+.+
T Consensus 125 ~~~~~~~~~~~-~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~LkpgG~l~~ 190 (254)
T 2h00_A 125 QKTLLMDALKE-ESEIIYDFCMCNPPFFANQLEAKGVNSRNPRRPPPSSVNTGGITEIMAEGGELEF 190 (254)
T ss_dssp TTCSSTTTSTT-CCSCCBSEEEECCCCC-------------------------CTTTTHHHHTHHHH
T ss_pred hhhhhhhhhhc-ccCCcccEEEECCCCccCcchhcccccccccccCCHHHHhhhHHHHEecCCEEEE
Confidence 7652 211110 001589999998552211 1234455677788776644
No 176
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.42 E-value=1.4e-12 Score=115.41 Aligned_cols=110 Identities=14% Similarity=0.135 Sum_probs=78.9
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCC-----cEEEEEcChhhH--HHHHHhCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-----KVKIKHGLAADS--LKALILNG 191 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-----~v~~~~gd~~~~--l~~~~~~~ 191 (279)
++.+|||||||+|..+..++... .++|+|+|+|+.+++.|++.+...+... .+++.++|+... ...+....
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~--~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGE--IALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhcC--CCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 35799999999998666555432 4699999999999999999988766431 267878777221 01111111
Q ss_pred CCCcEEEEEEeCCc------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 192 EASSYDFAFVDAEK------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 192 ~~~~fDlI~id~~~------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.+++||+|++.... .+...+++.+.++|||||++++...
T Consensus 126 ~~~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~ 170 (302)
T 2vdw_A 126 YFGKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTM 170 (302)
T ss_dssp CSSCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 25799999875431 3457899999999999999998654
No 177
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.42 E-value=1.7e-12 Score=118.33 Aligned_cols=104 Identities=17% Similarity=0.202 Sum_probs=89.6
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh---------------CCCCcEEEEEcChhh
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA---------------GVSHKVKIKHGLAAD 182 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~---------------g~~~~v~~~~gd~~~ 182 (279)
.++.+|||+|||+|..++.++...+ ..+|+++|+++++++.+++|++.+ ++.+ ++++++|+.+
T Consensus 46 ~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~-i~v~~~Da~~ 123 (378)
T 2dul_A 46 LNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKT-IVINHDDANR 123 (378)
T ss_dssp HCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSE-EEEEESCHHH
T ss_pred cCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCc-eEEEcCcHHH
Confidence 3678999999999999999999876 568999999999999999999998 7765 9999999988
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 183 SLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+... .++||+|++|+. .....+++.+.+.|++||++++..
T Consensus 124 ~~~~~-----~~~fD~I~lDP~-~~~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 124 LMAER-----HRYFHFIDLDPF-GSPMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HHHHS-----TTCEEEEEECCS-SCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhc-----cCCCCEEEeCCC-CCHHHHHHHHHHhcCCCCEEEEEe
Confidence 76543 368999999874 334688999999999999988854
No 178
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.41 E-value=2e-13 Score=120.23 Aligned_cols=103 Identities=10% Similarity=0.117 Sum_probs=84.2
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCC--CcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS--HKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~--~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
+.+|||||||+|..+..+++. +.+|+++|+++.+++.|++++...+.. .+++++++|+.+... +++||
T Consensus 83 ~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~-------~~~fD 152 (299)
T 3g2m_A 83 SGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFAL-------DKRFG 152 (299)
T ss_dssp CSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCC-------SCCEE
T ss_pred CCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCc-------CCCcC
Confidence 459999999999999999986 468999999999999999999876532 569999999976421 57899
Q ss_pred EEEEeCC------ccchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 198 FAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 198 lI~id~~------~~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
+|++... ......+++.+.++|+|||.|++.....
T Consensus 153 ~v~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 193 (299)
T 3g2m_A 153 TVVISSGSINELDEADRRGLYASVREHLEPGGKFLLSLAMS 193 (299)
T ss_dssp EEEECHHHHTTSCHHHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred EEEECCcccccCCHHHHHHHHHHHHHHcCCCcEEEEEeecC
Confidence 9986421 2245788999999999999999976543
No 179
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.41 E-value=1e-12 Score=117.58 Aligned_cols=105 Identities=21% Similarity=0.256 Sum_probs=85.9
Q ss_pred HhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
....++++|||||||+|..+..+++. + ..+|+++|++ .+++.|+++++..++.++++++++|+.+.. + ..+
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~-g-~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~--~----~~~ 104 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH-G-AKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVH--L----PFP 104 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT-C-CSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSC--C----SSS
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC-C-CCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhcc--C----CCC
Confidence 34557789999999999999999886 3 3599999999 599999999999999888999999997641 1 137
Q ss_pred cEEEEEEeCC------ccchHHHHHHHHccCCCCcEEEEe
Q 023645 195 SYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 195 ~fDlI~id~~------~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+||+|+++.. ......++..+.++|+|||.++.+
T Consensus 105 ~~D~Ivs~~~~~~l~~~~~~~~~l~~~~~~LkpgG~li~~ 144 (328)
T 1g6q_1 105 KVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIFPD 144 (328)
T ss_dssp CEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEESC
T ss_pred cccEEEEeCchhhcccHHHHHHHHHHHHhhcCCCeEEEEe
Confidence 8999998742 233567888889999999999854
No 180
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.41 E-value=6.9e-13 Score=118.64 Aligned_cols=107 Identities=12% Similarity=0.083 Sum_probs=90.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|+.+.. ..+||+
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------p~~~D~ 238 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHE-DLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL--------PAGAGG 238 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------CCSCSE
T ss_pred CCCEEEEeCCChhHHHHHHHHHCC-CCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC--------CCCCcE
Confidence 457999999999999999999987 689999999 9999999999999998889999999996322 238999
Q ss_pred EEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 199 AFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 199 I~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
|++....+ .....++++.+.|+|||.+++.+..++..
T Consensus 239 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 280 (332)
T 3i53_A 239 YVLSAVLHDWDDLSAVAILRRCAEAAGSGGVVLVIEAVAGDE 280 (332)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHHTTTCEEEEEECCCC--
T ss_pred EEEehhhccCCHHHHHHHHHHHHHhcCCCCEEEEEeecCCCC
Confidence 99875422 24678999999999999999988776654
No 181
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.41 E-value=2.3e-13 Score=115.47 Aligned_cols=103 Identities=12% Similarity=0.040 Sum_probs=80.5
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCC-hhHHHHH---HHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERD-ARSLEVA---KKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s-~~~~~~a---~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
.++.+|||||||+|..+..+++..+ +.+|+|+|+| +.+++.| +++....++. +++++++|+.+..... .
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~-~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~-~v~~~~~d~~~l~~~~-----~ 95 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQ-NTFYIGIDPVKENLFDISKKIIKKPSKGGLS-NVVFVIAAAESLPFEL-----K 95 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCT-TEEEEEECSCCGGGHHHHHHHTSCGGGTCCS-SEEEECCBTTBCCGGG-----T
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHHHHHcCCC-CeEEEEcCHHHhhhhc-----c
Confidence 3567999999999999999997655 7899999999 5666665 7777777775 4999999997652211 3
Q ss_pred CcEEEEEEeCCcc--------chHHHHHHHHccCCCCcEEEE
Q 023645 194 SSYDFAFVDAEKR--------MYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 194 ~~fDlI~id~~~~--------~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+.+|.|++..+.. ....+++++.++|||||.+++
T Consensus 96 d~v~~i~~~~~~~~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 96 NIADSISILFPWGTLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp TCEEEEEEESCCHHHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred CeEEEEEEeCCCcHHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 6788888765421 235689999999999999998
No 182
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.41 E-value=1.1e-12 Score=109.94 Aligned_cols=107 Identities=17% Similarity=0.178 Sum_probs=83.5
Q ss_pred HHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 113 ~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
......++.+|||||||+|..+..+++. +.+|+++|+++.+++.++++ .++.++.+|+.+..... ...
T Consensus 46 ~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-------~~~~~~~~~~~~~~~~~--~~~ 113 (227)
T 3e8s_A 46 LAILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA-------GAGEVHLASYAQLAEAK--VPV 113 (227)
T ss_dssp HHHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT-------CSSCEEECCHHHHHTTC--SCC
T ss_pred HHhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh-------cccccchhhHHhhcccc--ccc
Confidence 3344456789999999999999999986 46999999999999999886 34678888886542110 011
Q ss_pred CCcEEEEEEeCC--ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 193 ASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 193 ~~~fDlI~id~~--~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
..+||+|++... ..+...+++.+.++|+|||++++.+..
T Consensus 114 ~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~~~ 154 (227)
T 3e8s_A 114 GKDYDLICANFALLHQDIIELLSAMRTLLVPGGALVIQTLH 154 (227)
T ss_dssp CCCEEEEEEESCCCSSCCHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CCCccEEEECchhhhhhHHHHHHHHHHHhCCCeEEEEEecC
Confidence 456999998754 556778999999999999999997653
No 183
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.41 E-value=7e-13 Score=120.48 Aligned_cols=104 Identities=18% Similarity=0.222 Sum_probs=84.6
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++++|||||||+|..+++++++. ..+|++||.++ +++.|+++++.+|+.++|+++++++.+.. + +++|
T Consensus 81 ~~~~k~VLDvG~GtGiLs~~Aa~aG--A~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~--l-----pe~~ 150 (376)
T 4hc4_A 81 ALRGKTVLDVGAGTGILSIFCAQAG--ARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVE--L-----PEQV 150 (376)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHTT--CSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCC--C-----SSCE
T ss_pred hcCCCEEEEeCCCccHHHHHHHHhC--CCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeec--C-----Cccc
Confidence 4578899999999999999888763 25899999996 88999999999999999999999997641 1 5789
Q ss_pred EEEEEeCC------ccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 197 DFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 197 DlI~id~~------~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
|+|++... ......++....++|+|||.++.+..
T Consensus 151 DvivsE~~~~~l~~e~~l~~~l~a~~r~Lkp~G~~iP~~a 190 (376)
T 4hc4_A 151 DAIVSEWMGYGLLHESMLSSVLHARTKWLKEGGLLLPASA 190 (376)
T ss_dssp EEEECCCCBTTBTTTCSHHHHHHHHHHHEEEEEEEESCEE
T ss_pred cEEEeecccccccccchhhhHHHHHHhhCCCCceECCccc
Confidence 99987421 23456677777799999999986544
No 184
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.41 E-value=1.7e-12 Score=116.04 Aligned_cols=104 Identities=18% Similarity=0.126 Sum_probs=88.9
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++++...++.++++++.+|+.+. . .++||+|+
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~-----~~~~D~v~ 238 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEP-SARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQE---V-----PSNGDIYL 238 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCT-TCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTC---C-----CSSCSEEE
T ss_pred CEEEEeCCCchHHHHHHHHHCC-CCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCC---C-----CCCCCEEE
Confidence 8999999999999999999987 679999999 999999999998888777899999999752 1 46799999
Q ss_pred EeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 201 VDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 201 id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
+....+ .....++.+.+.|+|||.+++.+..++.
T Consensus 239 ~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 277 (334)
T 2ip2_A 239 LSRIIGDLDEAASLRLLGNCREAMAGDGRVVVIERTISA 277 (334)
T ss_dssp EESCGGGCCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred EchhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 876532 2347899999999999999998876654
No 185
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.41 E-value=8.2e-13 Score=106.31 Aligned_cols=101 Identities=12% Similarity=0.052 Sum_probs=82.2
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
...++.+|||+|||+|..+..+++.. .+++++|+++.+++.++++ ..+++++.+| ... .+++
T Consensus 14 ~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~------~~~v~~~~~d-~~~--------~~~~ 75 (170)
T 3i9f_A 14 FEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK------FDSVITLSDP-KEI--------PDNS 75 (170)
T ss_dssp HSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH------CTTSEEESSG-GGS--------CTTC
T ss_pred CcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh------CCCcEEEeCC-CCC--------CCCc
Confidence 44567799999999999999999864 4999999999999999887 2368999888 211 1578
Q ss_pred EEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 196 YDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 196 fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
||+|++... ..+...+++.+.+.|+|||.+++.+.....
T Consensus 76 ~D~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~ 117 (170)
T 3i9f_A 76 VDFILFANSFHDMDDKQHVISEVKRILKDDGRVIIIDWRKEN 117 (170)
T ss_dssp EEEEEEESCSTTCSCHHHHHHHHHHHEEEEEEEEEEEECSSC
T ss_pred eEEEEEccchhcccCHHHHHHHHHHhcCCCCEEEEEEcCccc
Confidence 999998765 345678999999999999999998765443
No 186
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.41 E-value=1.8e-12 Score=116.52 Aligned_cols=107 Identities=15% Similarity=0.216 Sum_probs=84.6
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC---CC----CcEEEEEcChhhHHHHHHhCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG---VS----HKVKIKHGLAADSLKALILNG 191 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g---~~----~~v~~~~gd~~~~l~~~~~~~ 191 (279)
.+++||+||||+|..+..+++..+ .+|++||+++.+++.|++++...+ +. ++++++.+|+.++++.....
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~--~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~- 264 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKP--KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 264 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCC--SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCEEEEEECChhHHHHHHHHCCC--CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhcc-
Confidence 578999999999999999987643 799999999999999999976321 22 26999999999988753211
Q ss_pred CCCcEEEEEEeCCc-c--------chHHHHHHH----HccCCCCcEEEEeC
Q 023645 192 EASSYDFAFVDAEK-R--------MYQEYFELL----LQLIRVGGIIVIDN 229 (279)
Q Consensus 192 ~~~~fDlI~id~~~-~--------~~~~~l~~~----~~~Lk~gG~lv~dd 229 (279)
.++||+||+|... . ...++++.+ .+.|+|||++++..
T Consensus 265 -~~~fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~qs 314 (364)
T 2qfm_A 265 -GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQG 314 (364)
T ss_dssp -TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred -CCCceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEEc
Confidence 4789999999743 1 235666766 89999999999874
No 187
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.40 E-value=5.3e-12 Score=110.21 Aligned_cols=110 Identities=10% Similarity=0.047 Sum_probs=84.2
Q ss_pred CCCEEEEEcCcc---CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHH-----HhC
Q 023645 119 GAQRCIEVGVYT---GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL-----ILN 190 (279)
Q Consensus 119 ~~~~VLEiG~G~---G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~-----~~~ 190 (279)
+..+|||||||+ |..+..+.+..| +++|+++|+|+.+++.|++++.. ..+++++++|+.+....+ ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p-~~~v~~vD~sp~~l~~Ar~~~~~---~~~v~~~~~D~~~~~~~~~~~~~~~~ 152 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNP-DARVVYVDIDPMVLTHGRALLAK---DPNTAVFTADVRDPEYILNHPDVRRM 152 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCT-TCEEEEEESSHHHHHHHHHHHTT---CTTEEEEECCTTCHHHHHHSHHHHHH
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCC-CCEEEEEECChHHHHHHHHhcCC---CCCeEEEEeeCCCchhhhccchhhcc
Confidence 457999999999 988777766666 68999999999999999998842 356999999997532110 011
Q ss_pred CCCCcEEEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 191 GEASSYDFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 191 ~~~~~fDlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
.+..+||+|++.... ......++++.+.|+|||+|++.+...
T Consensus 153 ~d~~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 153 IDFSRPAAIMLVGMLHYLSPDVVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CCTTSCCEEEETTTGGGSCTTTHHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCCCEEEEEechhhhCCcHHHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 112589999987542 236789999999999999999988654
No 188
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.40 E-value=6.3e-13 Score=115.83 Aligned_cols=101 Identities=18% Similarity=0.205 Sum_probs=83.2
Q ss_pred HHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 114 LVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
.+...++.+|||||||+|..+..+++ + +++|+++|+++.+++.+++++ .+++++.+|+.+.. . +
T Consensus 52 ~l~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~------~~~~~~~~d~~~~~--~-----~ 115 (279)
T 3ccf_A 52 LLNPQPGEFILDLGCGTGQLTEKIAQ--S-GAEVLGTDNAATMIEKARQNY------PHLHFDVADARNFR--V-----D 115 (279)
T ss_dssp HHCCCTTCEEEEETCTTSHHHHHHHH--T-TCEEEEEESCHHHHHHHHHHC------TTSCEEECCTTTCC--C-----S
T ss_pred HhCCCCCCEEEEecCCCCHHHHHHHh--C-CCeEEEEECCHHHHHHHHhhC------CCCEEEECChhhCC--c-----C
Confidence 34455778999999999999999998 3 689999999999999998765 35889999987532 1 4
Q ss_pred CcEEEEEEeCCc---cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 194 SSYDFAFVDAEK---RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 194 ~~fDlI~id~~~---~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
++||+|++.... .+...+++++.++|+|||.+++...
T Consensus 116 ~~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~l~~~~~ 155 (279)
T 3ccf_A 116 KPLDAVFSNAMLHWVKEPEAAIASIHQALKSGGRFVAEFG 155 (279)
T ss_dssp SCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCcCEEEEcchhhhCcCHHHHHHHHHHhcCCCcEEEEEec
Confidence 789999987653 4567899999999999999998654
No 189
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.39 E-value=6.1e-13 Score=112.19 Aligned_cols=104 Identities=16% Similarity=0.236 Sum_probs=85.0
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCC----CcEEEEEcChhhHHHHHHhCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS----HKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~----~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
.++.+|||+|||+|..+..++.. +.+|+++|+++.+++.+++++...++. .+++++.+|+.+.. . .+
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~-~-----~~ 99 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLS-F-----HD 99 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCC-S-----CT
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccC-C-----CC
Confidence 36779999999999999999986 469999999999999999998876663 35899999986532 1 15
Q ss_pred CcEEEEEEeCCcc---c---hHHHHHHHHccCCCCcEEEEeCC
Q 023645 194 SSYDFAFVDAEKR---M---YQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 194 ~~fDlI~id~~~~---~---~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
++||+|++..... + ...+++.+.++|+|||.+++.+.
T Consensus 100 ~~~D~v~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 142 (235)
T 3sm3_A 100 SSFDFAVMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF 142 (235)
T ss_dssp TCEEEEEEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CceeEEEEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence 7899999876522 2 33789999999999999999754
No 190
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.39 E-value=8.9e-13 Score=120.43 Aligned_cols=105 Identities=13% Similarity=0.172 Sum_probs=90.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCc-EEEEEcChhhHHH-HHHhCCCCCcE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHK-VKIKHGLAADSLK-ALILNGEASSY 196 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~-v~~~~gd~~~~l~-~~~~~~~~~~f 196 (279)
++.+|||++||+|..++.++...+...+|+++|+++.+++.+++|++.+++.++ ++++++|+.+.+. .. .++|
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~-----~~~f 126 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEW-----GFGF 126 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCC-----SSCE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhh-----CCCC
Confidence 467999999999999999998764126899999999999999999999999877 9999999988765 43 4689
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
|+|++|+ ......+++.+.++|++||+|++.-
T Consensus 127 D~V~lDP-~g~~~~~l~~a~~~Lk~gGll~~t~ 158 (392)
T 3axs_A 127 DYVDLDP-FGTPVPFIESVALSMKRGGILSLTA 158 (392)
T ss_dssp EEEEECC-SSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cEEEECC-CcCHHHHHHHHHHHhCCCCEEEEEe
Confidence 9999998 3444578999999999999988854
No 191
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.39 E-value=1.1e-12 Score=111.33 Aligned_cols=97 Identities=16% Similarity=0.168 Sum_probs=80.7
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||+|||+|..+..+++. .+++++|+++.+++.|+++....+ .+++++++|+.+... .++||+
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~~d~~~~~~-------~~~fD~ 99 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN--RHVDFWVQDMRELEL-------PEPVDA 99 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT--CCCEEEECCGGGCCC-------SSCEEE
T ss_pred CCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC--CceEEEEcChhhcCC-------CCCcCE
Confidence 4579999999999999988875 599999999999999999988766 358999999875421 478999
Q ss_pred EEEeC-C------ccchHHHHHHHHccCCCCcEEEEe
Q 023645 199 AFVDA-E------KRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 199 I~id~-~------~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|++.. . ......+++.+.++|+|||.++++
T Consensus 100 v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~ 136 (243)
T 3d2l_A 100 ITILCDSLNYLQTEADVKQTFDSAARLLTDGGKLLFD 136 (243)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEeCCchhhcCCHHHHHHHHHHHHHhcCCCeEEEEE
Confidence 99865 2 244567899999999999999984
No 192
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.39 E-value=7.1e-13 Score=112.55 Aligned_cols=108 Identities=15% Similarity=0.188 Sum_probs=85.5
Q ss_pred HHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHh
Q 023645 110 LLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (279)
Q Consensus 110 ~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~ 189 (279)
.+..++...++.+|||||||+|..+..+++. + ..+++++|+++.+++.++++... .+++++++|+.+.. .
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~-~-~~~v~~vD~s~~~~~~a~~~~~~----~~~~~~~~d~~~~~--~-- 103 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH-G-ASYVLGLDLSEKMLARARAAGPD----TGITYERADLDKLH--L-- 103 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT-T-CSEEEEEESCHHHHHHHHHTSCS----SSEEEEECCGGGCC--C--
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC-C-CCeEEEEcCCHHHHHHHHHhccc----CCceEEEcChhhcc--C--
Confidence 3444555557789999999999999999886 2 23999999999999999886642 36999999987632 1
Q ss_pred CCCCCcEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeC
Q 023645 190 NGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 190 ~~~~~~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+++||+|++... ..+...+++.+.++|+|||.+++..
T Consensus 104 --~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 104 --PQDSFDLAYSSLALHYVEDVARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp --CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CCCCceEEEEeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence 1578999998765 3356789999999999999999864
No 193
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.39 E-value=4.2e-12 Score=114.77 Aligned_cols=107 Identities=14% Similarity=0.119 Sum_probs=89.6
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|+++++..++.++++++.+|+.+. + ...+
T Consensus 188 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~-------~~~~ 257 (359)
T 1x19_A 188 LDGVKKMIDVGGGIGDISAAMLKHFP-ELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKE-S-------YPEA 257 (359)
T ss_dssp CTTCCEEEEESCTTCHHHHHHHHHCT-TCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTS-C-------CCCC
T ss_pred CCCCCEEEEECCcccHHHHHHHHHCC-CCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccC-C-------CCCC
Confidence 45678999999999999999999987 689999999 999999999999988888899999999754 1 1334
Q ss_pred EEEEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 197 DFAFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 197 DlI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
|+|++..... ....+++.+.+.|+|||.+++.+...+
T Consensus 258 D~v~~~~vlh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~ 299 (359)
T 1x19_A 258 DAVLFCRILYSANEQLSTIMCKKAFDAMRSGGRLLILDMVID 299 (359)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHTTCCTTCEEEEEEECCC
T ss_pred CEEEEechhccCCHHHHHHHHHHHHHhcCCCCEEEEEecccC
Confidence 9999876532 256789999999999999987775554
No 194
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.39 E-value=2.2e-12 Score=115.87 Aligned_cols=102 Identities=14% Similarity=0.107 Sum_probs=87.2
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|.+++. ++ + ..+|+++|+++.+++.|+++++.+++.++++++++|+.+.+ ++||
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~-~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~---------~~fD 260 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--N-AKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD---------VKGN 260 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--T-SSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC---------CCEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--C-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc---------CCCc
Confidence 4778999999999999999 76 2 57999999999999999999999998778999999998653 5899
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
+|++|.+.. ...+++.+.++|+|||++++......
T Consensus 261 ~Vi~dpP~~-~~~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 261 RVIMNLPKF-AHKFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp EEEECCTTT-GGGGHHHHHHHEEEEEEEEEEEEESS
T ss_pred EEEECCcHh-HHHHHHHHHHHcCCCCEEEEEEeecC
Confidence 999987533 23788899999999999998765443
No 195
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.39 E-value=3.3e-12 Score=103.42 Aligned_cols=104 Identities=14% Similarity=0.190 Sum_probs=80.0
Q ss_pred CCHHHHHHHHHHHhh--cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh
Q 023645 103 VSPDQAQLLAMLVQI--LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~--~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (279)
..++...++.. +.. .++.+|||+|||+|..+..+++. . +|+++|+++.+++. .++++++++|+
T Consensus 6 P~~~~~~l~~~-l~~~~~~~~~vLD~GcG~G~~~~~l~~~---~-~v~gvD~s~~~~~~----------~~~~~~~~~d~ 70 (170)
T 3q87_B 6 PGEDTYTLMDA-LEREGLEMKIVLDLGTSTGVITEQLRKR---N-TVVSTDLNIRALES----------HRGGNLVRADL 70 (170)
T ss_dssp CCHHHHHHHHH-HHHHTCCSCEEEEETCTTCHHHHHHTTT---S-EEEEEESCHHHHHT----------CSSSCEEECST
T ss_pred cCccHHHHHHH-HHhhcCCCCeEEEeccCccHHHHHHHhc---C-cEEEEECCHHHHhc----------ccCCeEEECCh
Confidence 34555555555 444 56789999999999999999875 3 99999999999876 34689999999
Q ss_pred hhHHHHHHhCCCCCcEEEEEEeCCcc------------chHHHHHHHHccCCCCcEEEEeC
Q 023645 181 ADSLKALILNGEASSYDFAFVDAEKR------------MYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 181 ~~~l~~~~~~~~~~~fDlI~id~~~~------------~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+.++ +++||+|+++.+.. .....++.+.+.| |||.+++-.
T Consensus 71 ~~~~~-------~~~fD~i~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~l-pgG~l~~~~ 123 (170)
T 3q87_B 71 LCSIN-------QESVDVVVFNPPYVPDTDDPIIGGGYLGREVIDRFVDAV-TVGMLYLLV 123 (170)
T ss_dssp TTTBC-------GGGCSEEEECCCCBTTCCCTTTBCCGGGCHHHHHHHHHC-CSSEEEEEE
T ss_pred hhhcc-------cCCCCEEEECCCCccCCccccccCCcchHHHHHHHHhhC-CCCEEEEEE
Confidence 76322 47899999987533 2356778888888 999998854
No 196
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.39 E-value=8e-13 Score=119.00 Aligned_cols=100 Identities=18% Similarity=0.230 Sum_probs=84.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
..+.+|||+|||+|..+..+++..+ ..+|+++|+++.+++.+++++...++. ++++.+|+.+.. +++||
T Consensus 195 ~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~--~~~~~~d~~~~~--------~~~fD 263 (343)
T 2pjd_A 195 HTKGKVLDVGCGAGVLSVAFARHSP-KIRLTLCDVSAPAVEASRATLAANGVE--GEVFASNVFSEV--------KGRFD 263 (343)
T ss_dssp TCCSBCCBTTCTTSHHHHHHHHHCT-TCBCEEEESBHHHHHHHHHHHHHTTCC--CEEEECSTTTTC--------CSCEE
T ss_pred CCCCeEEEecCccCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhCCC--CEEEEccccccc--------cCCee
Confidence 3467999999999999999999876 579999999999999999999988875 577889886532 47899
Q ss_pred EEEEeCCcc--------chHHHHHHHHccCCCCcEEEEe
Q 023645 198 FAFVDAEKR--------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 198 lI~id~~~~--------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+|+++...+ ....+++.+.+.|+|||.+++-
T Consensus 264 ~Iv~~~~~~~g~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 302 (343)
T 2pjd_A 264 MIISNPPFHDGMQTSLDAAQTLIRGAVRHLNSGGELRIV 302 (343)
T ss_dssp EEEECCCCCSSSHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred EEEECCCcccCccCCHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 999986533 2467899999999999999884
No 197
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.39 E-value=8.8e-13 Score=112.81 Aligned_cols=103 Identities=17% Similarity=0.179 Sum_probs=84.0
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++.. ..+|+++|+++.+++.|++++... .+++++++|+.+.. . .+++||
T Consensus 92 ~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~---~~~~~~~~d~~~~~--~----~~~~fD 160 (254)
T 1xtp_A 92 HGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM---PVGKFILASMETAT--L----PPNTYD 160 (254)
T ss_dssp CCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS---SEEEEEESCGGGCC--C----CSSCEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC---CceEEEEccHHHCC--C----CCCCeE
Confidence 457899999999999999998874 358999999999999999987643 46999999987531 1 147899
Q ss_pred EEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 198 FAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 198 lI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+|++.... .+...+++.+.++|+|||++++.+..
T Consensus 161 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 199 (254)
T 1xtp_A 161 LIVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKENC 199 (254)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred EEEEcchhhhCCHHHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 99987652 34577899999999999999997743
No 198
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.38 E-value=5.8e-12 Score=111.77 Aligned_cols=126 Identities=17% Similarity=0.130 Sum_probs=94.1
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD 182 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~ 182 (279)
+......++..++...++.+|||+|||+|..|..++..++..++|+++|+++.+++.+++++++.|+. +++++++|+.+
T Consensus 86 ~Qd~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~-~v~~~~~D~~~ 164 (309)
T 2b9e_A 86 LQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVS-CCELAEEDFLA 164 (309)
T ss_dssp ECCTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCC-SEEEEECCGGG
T ss_pred EECHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCC-eEEEEeCChHh
Confidence 34444455556666677889999999999999999998765689999999999999999999999986 49999999976
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCcc---------c------------------hHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 183 SLKALILNGEASSYDFAFVDAEKR---------M------------------YQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~---------~------------------~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
..+... ...+||.|++|++.. + ....++.+.++|+ ||.|+...+.+.
T Consensus 165 ~~~~~~---~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~~~~~~~~~~l~~~Q~~iL~~a~~~l~-gG~lvYsTCs~~ 238 (309)
T 2b9e_A 165 VSPSDP---RYHEVHYILLDPSCSGSGMPSRQLEEPGAGTPSPVRLHALAGFQQRALCHALTFPS-LQRLVYSTCSLC 238 (309)
T ss_dssp SCTTCG---GGTTEEEEEECCCCCC------------------CCHHHHHHHHHHHHHHHTTCTT-CCEEEEEESCCC
T ss_pred cCcccc---ccCCCCEEEEcCCcCCCCCCccCCChhhhccCCHHHHHHHHHHHHHHHHHHHhccC-CCEEEEECCCCC
Confidence 432110 015799999986520 0 1234666677786 999988766543
No 199
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=99.38 E-value=2.6e-12 Score=112.86 Aligned_cols=108 Identities=15% Similarity=0.233 Sum_probs=77.1
Q ss_pred CCCEEEEEcCccCHHHHHHH----HHCCCCCEE--EEEeCChhHHHHHHHHHHHh-CCCCcEE--EEEcChhhHHHHHHh
Q 023645 119 GAQRCIEVGVYTGYSSLAIA----LVLPESGCL--VACERDARSLEVAKKYYERA-GVSHKVK--IKHGLAADSLKALIL 189 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la----~~~~~~~~v--~~iD~s~~~~~~a~~~~~~~-g~~~~v~--~~~gd~~~~l~~~~~ 189 (279)
++.+|||||||+|..+..++ ...+ +.+| +++|+|++|++.|++.+... ++. +++ +..+++.+....+..
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~-~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~-~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYP-GVCINNEVVEPSAEQIAKYKELVAKTSNLE-NVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHST-TCEEEEEEECSCHHHHHHHHHHHHTCSSCT-TEEEEEECSCHHHHHHHHHT
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCC-CceeeEEEEeCCHHHHHHHHHHHHhccCCC-cceEEEEecchhhhhhhhcc
Confidence 45699999999998776543 3333 4544 99999999999999988753 333 344 456666543322111
Q ss_pred CCCCCcEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEe
Q 023645 190 NGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 190 ~~~~~~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
...+++||+|++... ..+....++++.++|||||.+++-
T Consensus 130 ~~~~~~fD~V~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~ 171 (292)
T 2aot_A 130 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLII 171 (292)
T ss_dssp TTCCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEE
T ss_pred ccCCCceeEEEEeeeeeecCCHHHHHHHHHHHcCCCcEEEEE
Confidence 112578999998765 445778999999999999999985
No 200
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.38 E-value=2.3e-12 Score=116.32 Aligned_cols=105 Identities=20% Similarity=0.200 Sum_probs=88.9
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++..+ +.+++++|+ +.+++.|++++...++.++++++.+|+.+.+ ...|
T Consensus 181 ~~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~--------~~~~ 250 (360)
T 1tw3_A 181 WTNVRHVLDVGGGKGGFAAAIARRAP-HVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPL--------PRKA 250 (360)
T ss_dssp CTTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCC--------SSCE
T ss_pred CccCcEEEEeCCcCcHHHHHHHHhCC-CCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCC--------CCCc
Confidence 45678999999999999999999886 689999999 9999999999999888878999999987532 2459
Q ss_pred EEEEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCC
Q 023645 197 DFAFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 197 DlI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
|+|++....+ ....+++.+.+.|+|||.+++.+..
T Consensus 251 D~v~~~~vl~~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 251 DAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred cEEEEcccccCCCHHHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 9999876532 2347899999999999999987766
No 201
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.37 E-value=5.8e-13 Score=111.72 Aligned_cols=103 Identities=16% Similarity=0.104 Sum_probs=77.7
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHH----HHHHhCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKK----YYERAGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~----~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
..++.+|||||||+|..+..+++..| +++|+++|+++.+++.+.+ +....++. +++++++|+.+. +. .
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p-~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~-~v~~~~~d~~~l-~~-----~ 96 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNP-SRLVVALDADKSRMEKISAKAAAKPAKGGLP-NLLYLWATAERL-PP-----L 96 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCT-TEEEEEEESCGGGGHHHHHHHTSCGGGTCCT-TEEEEECCSTTC-CS-----C
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHhhhhcCCC-ceEEEecchhhC-CC-----C
Confidence 45667999999999999999999876 7899999999998875433 33334554 599999999763 21 1
Q ss_pred CCcEEEEEEeCCc--------cchHHHHHHHHccCCCCcEEEEe
Q 023645 193 ASSYDFAFVDAEK--------RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 193 ~~~fDlI~id~~~--------~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.+. |.|++.... .+...+++.+.++|||||.+++.
T Consensus 97 ~~~-d~v~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 97 SGV-GELHVLMPWGSLLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp CCE-EEEEEESCCHHHHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred CCC-CEEEEEccchhhhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 344 777755431 22367899999999999999984
No 202
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.36 E-value=2e-12 Score=121.36 Aligned_cols=101 Identities=13% Similarity=0.150 Sum_probs=83.8
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..++.+++. + ..+|+++|+++ +++.|+++++.+++.++++++++|+.+.. + .++|
T Consensus 156 ~~~~~~VLDiGcGtG~la~~la~~-~-~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~--~-----~~~f 225 (480)
T 3b3j_A 156 DFKDKIVLDVGCGSGILSFFAAQA-G-ARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVS--L-----PEQV 225 (480)
T ss_dssp GTTTCEEEEESCSTTHHHHHHHHT-T-CSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCC--C-----SSCE
T ss_pred hcCCCEEEEecCcccHHHHHHHHc-C-CCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCc--c-----CCCe
Confidence 346789999999999999998874 3 46999999998 99999999999999888999999997631 1 3689
Q ss_pred EEEEEeCC-----ccchHHHHHHHHccCCCCcEEEE
Q 023645 197 DFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 197 DlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
|+|+++.. .+.....+..+.++|+|||++++
T Consensus 226 D~Ivs~~~~~~~~~e~~~~~l~~~~~~LkpgG~li~ 261 (480)
T 3b3j_A 226 DIIISEPMGYMLFNERMLESYLHAKKYLKPSGNMFP 261 (480)
T ss_dssp EEEECCCCHHHHTCHHHHHHHHHGGGGEEEEEEEES
T ss_pred EEEEEeCchHhcCcHHHHHHHHHHHHhcCCCCEEEE
Confidence 99998754 23445667777899999999985
No 203
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.36 E-value=5.1e-12 Score=112.00 Aligned_cols=108 Identities=11% Similarity=0.064 Sum_probs=83.1
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC------CCCcEEEEEcChhhHHH--HHHhC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG------VSHKVKIKHGLAADSLK--ALILN 190 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g------~~~~v~~~~gd~~~~l~--~~~~~ 190 (279)
++.+|||||||+|..+..+++. + ..+++++|+++.+++.|++++...+ ...+++++++|+.+... .+.
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-- 109 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKG-R-INKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFR-- 109 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHT-T-CSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCS--
T ss_pred CCCEEEEECCCCcHHHHHHHhc-C-CCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcc--
Confidence 5679999999999999998874 3 5799999999999999999887653 23369999999975410 010
Q ss_pred CCCCcEEEEEEeCCc-------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 191 GEASSYDFAFVDAEK-------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 191 ~~~~~fDlI~id~~~-------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
...++||+|++.... .....+++.+.++|+|||++++...
T Consensus 110 ~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 156 (313)
T 3bgv_A 110 DPQMCFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTP 156 (313)
T ss_dssp STTCCEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred cCCCCEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecC
Confidence 013589999987653 2245889999999999999998644
No 204
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.36 E-value=7.4e-12 Score=113.98 Aligned_cols=117 Identities=22% Similarity=0.245 Sum_probs=92.3
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
.+.+.....+..++ ..++.+|||+|||+|..++.++...+ .++|+|+|+++.+++.|+++++.+|+.++++++++|+.
T Consensus 201 ~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~~-~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~ 278 (373)
T 3tm4_A 201 HLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRRY-SGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDAT 278 (373)
T ss_dssp CCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTTC-CSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGG
T ss_pred CccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChh
Confidence 34566666666666 66788999999999999999998754 46999999999999999999999999778999999998
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCcc-----------chHHHHHHHHccCCCCcEEEE
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKR-----------MYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~-----------~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+.... .++||+|++|.+.. .+..+++.+.+.| +|+.+++
T Consensus 279 ~~~~~------~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l-~g~~~~i 328 (373)
T 3tm4_A 279 QLSQY------VDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVL-EKRGVFI 328 (373)
T ss_dssp GGGGT------CSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHE-EEEEEEE
T ss_pred hCCcc------cCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHc-CCeEEEE
Confidence 75321 47899999987621 1466778888888 4444444
No 205
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.36 E-value=8.6e-13 Score=111.58 Aligned_cols=92 Identities=12% Similarity=0.084 Sum_probs=76.2
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCC-CCcE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE-ASSY 196 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~-~~~f 196 (279)
.++.+|||||||+|..+..+++. +.+|+++|+++.+++.++++ ..+++++++|+.+.++. . +++|
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~d~~~~~~~-----~~~~~f 112 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN------APHADVYEWNGKGELPA-----GLGAPF 112 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH------CTTSEEEECCSCSSCCT-----TCCCCE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh------CCCceEEEcchhhccCC-----cCCCCE
Confidence 46789999999999999999987 47999999999999999987 23589999999643321 1 4689
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEE
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
|+|++.. +...+++.+.++|||||.++
T Consensus 113 D~v~~~~---~~~~~l~~~~~~LkpgG~l~ 139 (226)
T 3m33_A 113 GLIVSRR---GPTSVILRLPELAAPDAHFL 139 (226)
T ss_dssp EEEEEES---CCSGGGGGHHHHEEEEEEEE
T ss_pred EEEEeCC---CHHHHHHHHHHHcCCCcEEE
Confidence 9999984 34467888999999999999
No 206
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.36 E-value=7e-12 Score=113.95 Aligned_cols=127 Identities=17% Similarity=0.067 Sum_probs=92.0
Q ss_pred CCCCCCCCHHHHHHHH-HHHhhc--CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcE
Q 023645 97 RGSQMQVSPDQAQLLA-MLVQIL--GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKV 173 (279)
Q Consensus 97 ~~~~~~~~~~~~~~l~-~l~~~~--~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v 173 (279)
+.++.++++...+.+. .+.... .+.+|||+|||+|.+++.+++. ..+|+++|+++++++.|+++++.+|+. ++
T Consensus 188 ~~~F~Q~n~~~~~~l~~~~~~~~~~~~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~-~v 263 (369)
T 3bt7_A 188 ENSFTQPNAAMNIQMLEWALDVTKGSKGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHID-NV 263 (369)
T ss_dssp TTSCCCSBHHHHHHHHHHHHHHTTTCCSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCC-SE
T ss_pred CCCeecCCHHHHHHHHHHHHHHhhcCCCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCC-ce
Confidence 3455666666544433 333322 3578999999999999999875 359999999999999999999999985 69
Q ss_pred EEEEcChhhHHHHHHhCCC----------CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 174 KIKHGLAADSLKALILNGE----------ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 174 ~~~~gd~~~~l~~~~~~~~----------~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+++.+|+.+.++.+...++ ..+||+|++|++.... .+.+.+.|+++|.|++-.+
T Consensus 264 ~~~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~g~---~~~~~~~l~~~g~ivyvsc 327 (369)
T 3bt7_A 264 QIIRMAAEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRSGL---DSETEKMVQAYPRILYISC 327 (369)
T ss_dssp EEECCCSHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTTCC---CHHHHHHHTTSSEEEEEES
T ss_pred EEEECCHHHHHHHHhhccccccccccccccCCCCEEEECcCcccc---HHHHHHHHhCCCEEEEEEC
Confidence 9999999887765521100 0379999999886532 2344555668888877443
No 207
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=3.5e-12 Score=108.75 Aligned_cols=107 Identities=10% Similarity=0.047 Sum_probs=82.4
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||+|..+..+++..+ +|+++|+++.+++.+++++. ..+++++++|+.+........ ....|
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~---~v~gvD~s~~~~~~a~~~~~----~~~~~~~~~d~~~~~~~~~~~-~~~~~ 125 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP---RVIGLDVSKSALEIAAKENT----AANISYRLLDGLVPEQAAQIH-SEIGD 125 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS---CEEEEESCHHHHHHHHHHSC----CTTEEEEECCTTCHHHHHHHH-HHHCS
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC---CEEEEECCHHHHHHHHHhCc----ccCceEEECcccccccccccc-cccCc
Confidence 34567999999999999999999854 89999999999999998762 236999999997643211000 01359
Q ss_pred EEEEEeCC-----ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 197 DFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 197 DlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
|+|++... ..+...+++.+.+.|||||.+++-+..
T Consensus 126 d~v~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 126 ANIYMRTGFHHIPVEKRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp CEEEEESSSTTSCGGGHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred cEEEEcchhhcCCHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99998754 235678999999999999997776554
No 208
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=6.7e-13 Score=114.68 Aligned_cols=111 Identities=19% Similarity=0.108 Sum_probs=85.2
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH
Q 023645 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 104 ~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (279)
.+.....+...+...++.+|||||||+|.++..+++ + +.+|+|+|+++.+++.+++.. +++++++|+.+.
T Consensus 19 ~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~--~-~~~v~gvD~s~~~~~~a~~~~-------~~~~~~~d~~~~ 88 (261)
T 3ege_A 19 DIRIVNAIINLLNLPKGSVIADIGAGTGGYSVALAN--Q-GLFVYAVEPSIVMRQQAVVHP-------QVEWFTGYAENL 88 (261)
T ss_dssp CHHHHHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT--T-TCEEEEECSCHHHHHSSCCCT-------TEEEECCCTTSC
T ss_pred cHHHHHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh--C-CCEEEEEeCCHHHHHHHHhcc-------CCEEEECchhhC
Confidence 344444455555556788999999999999999997 2 689999999999887766533 599999999653
Q ss_pred HHHHHhCCCCCcEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 184 LKALILNGEASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 184 l~~~~~~~~~~~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+. .+++||+|++... ..+...+++++.+.|| ||.+++.+..
T Consensus 89 -~~-----~~~~fD~v~~~~~l~~~~~~~~~l~~~~~~Lk-gG~~~~~~~~ 132 (261)
T 3ege_A 89 -AL-----PDKSVDGVISILAIHHFSHLEKSFQEMQRIIR-DGTIVLLTFD 132 (261)
T ss_dssp -CS-----CTTCBSEEEEESCGGGCSSHHHHHHHHHHHBC-SSCEEEEEEC
T ss_pred -CC-----CCCCEeEEEEcchHhhccCHHHHHHHHHHHhC-CcEEEEEEcC
Confidence 21 1578999998765 3567889999999999 9977665543
No 209
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.35 E-value=1.4e-12 Score=110.67 Aligned_cols=101 Identities=10% Similarity=0.093 Sum_probs=82.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++. +.+|+++|+++.+++.++++. ...+++++++|+.+.. . .+++||
T Consensus 52 ~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~~~d~~~~~-~-----~~~~fD 118 (242)
T 3l8d_A 52 KKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG----EGPDLSFIKGDLSSLP-F-----ENEQFE 118 (242)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT----CBTTEEEEECBTTBCS-S-----CTTCEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc----ccCCceEEEcchhcCC-C-----CCCCcc
Confidence 35679999999999999999986 469999999999999998764 2356999999997542 1 157899
Q ss_pred EEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 198 FAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 198 lI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+|++... ..+...+++.+.++|+|||++++....
T Consensus 119 ~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 119 AIMAINSLEWTEEPLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp EEEEESCTTSSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EEEEcChHhhccCHHHHHHHHHHHhCCCeEEEEEEcC
Confidence 9998764 345678899999999999999997643
No 210
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.35 E-value=5.6e-12 Score=116.61 Aligned_cols=117 Identities=15% Similarity=0.172 Sum_probs=91.4
Q ss_pred CCCCCCCHHHHHHH-HHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEE
Q 023645 98 GSQMQVSPDQAQLL-AMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK 176 (279)
Q Consensus 98 ~~~~~~~~~~~~~l-~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~ 176 (279)
..+.+.++...+.+ ..+....++.+|||+|||+|.+++.+++. ..+|+++|+++++++.|+++++.+++. ++++
T Consensus 268 ~~F~q~n~~~~e~l~~~~~~~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~--v~~~ 342 (425)
T 2jjq_A 268 NSFFQTNSYQAVNLVRKVSELVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD--AEFE 342 (425)
T ss_dssp TSCCCSBHHHHHHHHHHHHHHCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC--EEEE
T ss_pred ccccccCHHHHHHHHHHhhccCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc--EEEE
Confidence 45566666655443 33333556789999999999999999986 469999999999999999999998885 9999
Q ss_pred EcChhhHHHHHHhCCCCCcEEEEEEeCCccchHH-HHHHHHccCCCCcEEEEe
Q 023645 177 HGLAADSLKALILNGEASSYDFAFVDAEKRMYQE-YFELLLQLIRVGGIIVID 228 (279)
Q Consensus 177 ~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~-~l~~~~~~Lk~gG~lv~d 228 (279)
.+|+.+.+ ..+||+|++|.+...... .++.+ ..|+|||++++.
T Consensus 343 ~~d~~~~~--------~~~fD~Vv~dPPr~g~~~~~~~~l-~~l~p~givyvs 386 (425)
T 2jjq_A 343 VASDREVS--------VKGFDTVIVDPPRAGLHPRLVKRL-NREKPGVIVYVS 386 (425)
T ss_dssp ECCTTTCC--------CTTCSEEEECCCTTCSCHHHHHHH-HHHCCSEEEEEE
T ss_pred ECChHHcC--------ccCCCEEEEcCCccchHHHHHHHH-HhcCCCcEEEEE
Confidence 99998653 238999999988554433 55555 458999999985
No 211
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.35 E-value=2.5e-12 Score=117.06 Aligned_cols=102 Identities=12% Similarity=0.082 Sum_probs=84.5
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHH-HHhCCCCCcEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKA-LILNGEASSYD 197 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~-~~~~~~~~~fD 197 (279)
++++|||+| |+|..+..++...+ ..+|+++|+++.+++.|+++++..|+. +++++++|+.+.++. . +++||
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~-~~~v~~vDi~~~~l~~a~~~~~~~g~~-~v~~~~~D~~~~l~~~~-----~~~fD 243 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGL-PKRIAVLDIDERLTKFIEKAANEIGYE-DIEIFTFDLRKPLPDYA-----LHKFD 243 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTC-CSEEEEECSCHHHHHHHHHHHHHHTCC-CEEEECCCTTSCCCTTT-----SSCBS
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCC-CCEEEEEECCHHHHHHHHHHHHHcCCC-CEEEEEChhhhhchhhc-----cCCcc
Confidence 578999999 99999999988754 579999999999999999999999987 699999999763331 1 35899
Q ss_pred EEEEeCCc--cchHHHHHHHHccCCCCc-EEEEe
Q 023645 198 FAFVDAEK--RMYQEYFELLLQLIRVGG-IIVID 228 (279)
Q Consensus 198 lI~id~~~--~~~~~~l~~~~~~Lk~gG-~lv~d 228 (279)
+|++|.+. .....+++.+.+.|+||| ++++.
T Consensus 244 ~Vi~~~p~~~~~~~~~l~~~~~~LkpgG~~~~~~ 277 (373)
T 2qm3_A 244 TFITDPPETLEAIRAFVGRGIATLKGPRCAGYFG 277 (373)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHTBCSTTCEEEEE
T ss_pred EEEECCCCchHHHHHHHHHHHHHcccCCeEEEEE
Confidence 99999763 235678899999999999 44553
No 212
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.35 E-value=3.7e-12 Score=107.82 Aligned_cols=99 Identities=13% Similarity=0.103 Sum_probs=80.4
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++..+ +++++|+++.+++.|++++ .+++++++|+.+... .++||
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~---~v~~~D~s~~~~~~a~~~~------~~~~~~~~d~~~~~~-------~~~~D 102 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG---DTAGLELSEDMLTHARKRL------PDATLHQGDMRDFRL-------GRKFS 102 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS---EEEEEESCHHHHHHHHHHC------TTCEEEECCTTTCCC-------SSCEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC---cEEEEeCCHHHHHHHHHhC------CCCEEEECCHHHccc-------CCCCc
Confidence 4567999999999999999998753 9999999999999998864 248999999875321 46899
Q ss_pred EEEEeCC-------ccchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 198 FAFVDAE-------KRMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 198 lI~id~~-------~~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
+|++... ......+++.+.++|+|||.++++....
T Consensus 103 ~v~~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 103 AVVSMFSSVGYLKTTEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp EEEECTTGGGGCCSHHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred EEEEcCchHhhcCCHHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 9996432 1445788999999999999999986544
No 213
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.34 E-value=5.6e-13 Score=114.68 Aligned_cols=110 Identities=14% Similarity=0.118 Sum_probs=83.1
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCC----------------------------
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV---------------------------- 169 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~---------------------------- 169 (279)
.++.+|||||||+|..+..++.... .+|+++|+++.+++.+++++...+.
T Consensus 55 ~~~~~vLDlGcG~G~~~~~l~~~~~--~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 55 VKGELLIDIGSGPTIYQLLSACESF--TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp CCEEEEEEESCTTCCGGGTTGGGTE--EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cCCCEEEEECCCccHHHHHHhhccc--CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4567999999999999998887532 4899999999999999988764321
Q ss_pred CCcE-EEEEcChhhHHHHHHhCCCCCcEEEEEEeCCcc-------chHHHHHHHHccCCCCcEEEEeCCC
Q 023645 170 SHKV-KIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------MYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 170 ~~~v-~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~-------~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
..++ +++++|+.+..+.. ....++||+|++..... ....+++.+.++|+|||++++.+..
T Consensus 133 ~~~v~~~~~~d~~~~~~~~--~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 200 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLG--GVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLKPGGFLVMVDAL 200 (265)
T ss_dssp HHHEEEEEECCTTSSSTTT--TCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred hhhheeEEEeeeccCCCCC--ccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCCCCcEEEEEecC
Confidence 1127 89999987643211 00127899999876533 5678899999999999999997744
No 214
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.34 E-value=2.7e-12 Score=102.95 Aligned_cols=102 Identities=19% Similarity=0.215 Sum_probs=75.7
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHH--HHHHhCCCCC
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL--KALILNGEAS 194 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l--~~~~~~~~~~ 194 (279)
..++.+|||+|||+|..+..+++.++++.+++++|+++ +.+. .+++++++|+.+.. ..+.....++
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~-----------~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI-----------VGVDFLQGDFRDELVMKALLERVGDS 87 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC-----------TTEEEEESCTTSHHHHHHHHHHHTTC
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc-----------CcEEEEEcccccchhhhhhhccCCCC
Confidence 34677999999999999999999864468999999999 6432 45899999997642 0010000147
Q ss_pred cEEEEEEeCCcc---ch-----------HHHHHHHHccCCCCcEEEEeCC
Q 023645 195 SYDFAFVDAEKR---MY-----------QEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 195 ~fDlI~id~~~~---~~-----------~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+||+|+++.... .. ..+++.+.++|+|||.+++...
T Consensus 88 ~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 137 (180)
T 1ej0_A 88 KVQVVMSDMAPNMSGTPAVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF 137 (180)
T ss_dssp CEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ceeEEEECCCccccCCCccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 899999976522 11 5788999999999999998543
No 215
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.34 E-value=1.6e-12 Score=108.20 Aligned_cols=97 Identities=18% Similarity=0.197 Sum_probs=78.0
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||||||+|..+..+ + ..+++++|+++.+++.++++. .+++++++|+.+.. . .+++||+
T Consensus 36 ~~~~vLdiG~G~G~~~~~l----~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~~--~----~~~~fD~ 98 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL----P-YPQKVGVEPSEAMLAVGRRRA------PEATWVRAWGEALP--F----PGESFDV 98 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC----C-CSEEEEECCCHHHHHHHHHHC------TTSEEECCCTTSCC--S----CSSCEEE
T ss_pred CCCeEEEECCCCCHhHHhC----C-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcccccCC--C----CCCcEEE
Confidence 5679999999999988776 2 239999999999999998876 35889999986531 1 1568999
Q ss_pred EEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 199 AFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 199 I~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
|++... ..+....++.+.++|||||.+++.....
T Consensus 99 v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~~ 135 (211)
T 2gs9_A 99 VLLFTTLEFVEDVERVLLEARRVLRPGGALVVGVLEA 135 (211)
T ss_dssp EEEESCTTTCSCHHHHHHHHHHHEEEEEEEEEEEECT
T ss_pred EEEcChhhhcCCHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 998765 3456789999999999999999976543
No 216
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.34 E-value=2.4e-12 Score=111.50 Aligned_cols=105 Identities=15% Similarity=0.079 Sum_probs=76.4
Q ss_pred HHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh-HHHHHHh
Q 023645 111 LAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD-SLKALIL 189 (279)
Q Consensus 111 l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~-~l~~~~~ 189 (279)
+...+...++.+|||||||+|..+..+++. +++|+++|+|+.+++.|++++... .+.....+... .....
T Consensus 37 il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~----~v~~~~~~~~~~~~~~~-- 107 (261)
T 3iv6_A 37 DIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR----CVTIDLLDITAEIPKEL-- 107 (261)
T ss_dssp HHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS----CCEEEECCTTSCCCGGG--
T ss_pred HHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc----cceeeeeeccccccccc--
Confidence 333445567789999999999999999986 469999999999999999987643 12222222211 00111
Q ss_pred CCCCCcEEEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEe
Q 023645 190 NGEASSYDFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.++||+|+++... ......+..+.++| |||.+++.
T Consensus 108 ---~~~fD~Vv~~~~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS 147 (261)
T 3iv6_A 108 ---AGHFDFVLNDRLINRFTTEEARRACLGMLSLV-GSGTVRAS 147 (261)
T ss_dssp ---TTCCSEEEEESCGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred ---CCCccEEEEhhhhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence 4789999998653 34556888999999 99999985
No 217
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.33 E-value=2.8e-11 Score=100.40 Aligned_cols=111 Identities=15% Similarity=0.141 Sum_probs=85.1
Q ss_pred CCHHHHHHHHHHHh---hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC
Q 023645 103 VSPDQAQLLAMLVQ---ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (279)
Q Consensus 103 ~~~~~~~~l~~l~~---~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (279)
.++.....+...+. ..++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..++ +++++++|
T Consensus 30 ~~~~~~~~l~~~~~~~~~~~~~~vlD~g~G~G~~~~~l~~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~--~~~~~~~d 105 (207)
T 1wy7_A 30 TPGNAASELLWLAYSLGDIEGKVVADLGAGTGVLSYGALLLG--AKEVICVEVDKEAVDVLIENLGEFKG--KFKVFIGD 105 (207)
T ss_dssp CCHHHHHHHHHHHHHTTSSTTCEEEEETCTTCHHHHHHHHTT--CSEEEEEESCHHHHHHHHHHTGGGTT--SEEEEESC
T ss_pred CchHHHHHHHHHHHHcCCCCcCEEEEeeCCCCHHHHHHHHcC--CCEEEEEECCHHHHHHHHHHHHHcCC--CEEEEECc
Confidence 44544444444433 3357899999999999999998862 35899999999999999999988877 59999999
Q ss_pred hhhHHHHHHhCCCCCcEEEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEe
Q 023645 180 AADSLKALILNGEASSYDFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 180 ~~~~l~~~~~~~~~~~fDlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+.+. .++||+|+++.+. .....+++.+.+.+ |+++++.
T Consensus 106 ~~~~---------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l--~~~~~~~ 148 (207)
T 1wy7_A 106 VSEF---------NSRVDIVIMNPPFGSQRKHADRPFLLKAFEIS--DVVYSIH 148 (207)
T ss_dssp GGGC---------CCCCSEEEECCCCSSSSTTTTHHHHHHHHHHC--SEEEEEE
T ss_pred hHHc---------CCCCCEEEEcCCCccccCCchHHHHHHHHHhc--CcEEEEE
Confidence 9763 3589999999762 23457888888888 6665543
No 218
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.32 E-value=1.1e-11 Score=108.60 Aligned_cols=108 Identities=14% Similarity=0.154 Sum_probs=75.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeC-ChhHHHHHHHHH-----HHhCCC----CcEEEEEcChhhHHHHH
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACER-DARSLEVAKKYY-----ERAGVS----HKVKIKHGLAADSLKAL 187 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~-s~~~~~~a~~~~-----~~~g~~----~~v~~~~gd~~~~l~~~ 187 (279)
.++++|||||||+|..++.+++. + ..+|+++|+ ++.+++.|+++. +..++. ++++++..+..+....+
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~-~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 155 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-G-ADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSL 155 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-T-CSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-C-CCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHH
Confidence 46779999999999999988875 2 359999999 899999999999 555554 46888855533211111
Q ss_pred HhCCCCCcEEEEEE-eCC--ccchHHHHHHHHccCC---C--CcEEEE
Q 023645 188 ILNGEASSYDFAFV-DAE--KRMYQEYFELLLQLIR---V--GGIIVI 227 (279)
Q Consensus 188 ~~~~~~~~fDlI~i-d~~--~~~~~~~l~~~~~~Lk---~--gG~lv~ 227 (279)
......++||+|++ |.. ......+++.+.++|+ | ||.+++
T Consensus 156 ~~~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v 203 (281)
T 3bzb_A 156 QRCTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALV 203 (281)
T ss_dssp HHHHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEE
T ss_pred HhhccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEE
Confidence 10001478999987 432 4457789999999999 9 997665
No 219
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.31 E-value=8e-12 Score=101.96 Aligned_cols=106 Identities=11% Similarity=0.123 Sum_probs=83.0
Q ss_pred HHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHH
Q 023645 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 108 ~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
..++..+ ..++.+|||+|||+|..+..+++. +.+++++|+++.+++.+++++. +++++++|+.+.. +
T Consensus 37 ~~~l~~~--~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~~------~~~~~~~d~~~~~--~ 103 (195)
T 3cgg_A 37 ARLIDAM--APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDFP------EARWVVGDLSVDQ--I 103 (195)
T ss_dssp HHHHHHH--SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHCT------TSEEEECCTTTSC--C
T ss_pred HHHHHHh--ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhCC------CCcEEEcccccCC--C
Confidence 3444444 346779999999999999999986 4699999999999999988753 4889999987531 1
Q ss_pred HhCCCCCcEEEEEEeC-Cc-----cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 188 ILNGEASSYDFAFVDA-EK-----RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~-~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
..++||+|++.. .. .....+++.+.++|+|||.+++...
T Consensus 104 ----~~~~~D~i~~~~~~~~~~~~~~~~~~l~~~~~~l~~~G~l~~~~~ 148 (195)
T 3cgg_A 104 ----SETDFDLIVSAGNVMGFLAEDGREPALANIHRALGADGRAVIGFG 148 (195)
T ss_dssp ----CCCCEEEEEECCCCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ----CCCceeEEEECCcHHhhcChHHHHHHHHHHHHHhCCCCEEEEEeC
Confidence 147899999973 22 3347789999999999999998643
No 220
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=99.31 E-value=1.2e-11 Score=106.31 Aligned_cols=148 Identities=13% Similarity=0.169 Sum_probs=104.8
Q ss_pred CCCEEEEEcCccCHHHHHHHHH------CCCCCEEEEEeC-----Chh-------------------HHHHHHHHH----
Q 023645 119 GAQRCIEVGVYTGYSSLAIALV------LPESGCLVACER-----DAR-------------------SLEVAKKYY---- 164 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~------~~~~~~v~~iD~-----s~~-------------------~~~~a~~~~---- 164 (279)
-+..|+|+||..|.++..++.. .....+|+++|. .+. ..+..++.+
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~ 148 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHE 148 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHH
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHh
Confidence 4669999999999999997753 123568999993 211 111122222
Q ss_pred --HHhCC-CCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCc-cchHHHHHHHHccCCCCcEEEEeCCCCCCcccCcc
Q 023645 165 --ERAGV-SHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-RMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQM 240 (279)
Q Consensus 165 --~~~g~-~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~-~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~ 240 (279)
+..+. .++++++.|++.+.++.+..+....+||+|++|++. ..+..+++.+++.|+|||+|++||+.+++-
T Consensus 149 ~~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~Y~~t~~~le~~~p~l~~GGvIv~DD~~~~~w----- 223 (257)
T 3tos_A 149 CSDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDLYEPTKAVLEAIRPYLTKGSIVAFDELDNPKW----- 223 (257)
T ss_dssp TTSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCCHHHHHHHHHHHGGGEEEEEEEEESSTTCTTC-----
T ss_pred hhhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcccchHHHHHHHHHHHhCCCcEEEEcCCCCCCC-----
Confidence 23454 478999999999999887655435689999999985 556778999999999999999999853221
Q ss_pred cCChhhHHHHHHHHHhhhCCCeEEEEeecCCceEEEE
Q 023645 241 VNDAKTISIRNFNKNLMEDERVSISMVPIGDGMTICQ 277 (279)
Q Consensus 241 ~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G~~i~~ 277 (279)
. ..+.|+.+| ..+.++....+|++.+...++
T Consensus 224 -~-G~~~A~~ef----~~~~~~~i~~~p~~~~~~y~~ 254 (257)
T 3tos_A 224 -P-GENIAMRKV----LGLDHAPLRLLPGRPAPAYLR 254 (257)
T ss_dssp -T-HHHHHHHHH----TCTTSSCCEECTTCSCCEEEE
T ss_pred -h-HHHHHHHHH----HhhCCCeEEEccCCCCCEEEE
Confidence 1 223444444 467788888999988876553
No 221
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.30 E-value=2e-12 Score=107.44 Aligned_cols=102 Identities=9% Similarity=0.091 Sum_probs=81.6
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++..+ .+++++|+++.+++.++++... ..+++++++|+.+. + + .+++||
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~--~~v~~~D~s~~~~~~a~~~~~~---~~~i~~~~~d~~~~-~-~----~~~~fD 109 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGF--PNVTSVDYSSVVVAAMQACYAH---VPQLRWETMDVRKL-D-F----PSASFD 109 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTC--CCEEEEESCHHHHHHHHHHTTT---CTTCEEEECCTTSC-C-S----CSSCEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCC--CcEEEEeCCHHHHHHHHHhccc---CCCcEEEEcchhcC-C-C----CCCccc
Confidence 4567999999999999999998643 3899999999999999998763 24689999998754 1 1 147899
Q ss_pred EEEEeCCc------------------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 198 FAFVDAEK------------------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 198 lI~id~~~------------------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+|++.... .....+++.+.++|+|||.+++.+.
T Consensus 110 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 160 (215)
T 2pxx_A 110 VVLEKGTLDALLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTS 160 (215)
T ss_dssp EEEEESHHHHHTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred EEEECcchhhhccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeC
Confidence 99986431 2346789999999999999998654
No 222
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.29 E-value=7.3e-12 Score=108.00 Aligned_cols=95 Identities=16% Similarity=0.180 Sum_probs=77.1
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++.+|||||||+|..+..+++. +.+++++|+++.+++.++++.. . .++++|+.+.. . .+++||+
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~-----~--~~~~~d~~~~~--~----~~~~fD~ 117 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV-----K--NVVEAKAEDLP--F----PSGAFEA 117 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC-----S--CEEECCTTSCC--S----CTTCEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC-----C--CEEECcHHHCC--C----CCCCEEE
Confidence 6789999999999999999875 4699999999999999988653 1 27888886531 1 1578999
Q ss_pred EEEeCC----ccchHHHHHHHHccCCCCcEEEEeC
Q 023645 199 AFVDAE----KRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 199 I~id~~----~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
|++... ..+...+++.+.++|+|||.+++..
T Consensus 118 v~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 152 (260)
T 2avn_A 118 VLALGDVLSYVENKDKAFSEIRRVLVPDGLLIATV 152 (260)
T ss_dssp EEECSSHHHHCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEcchhhhccccHHHHHHHHHHHcCCCeEEEEEe
Confidence 998653 2447789999999999999999864
No 223
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=99.29 E-value=1.6e-11 Score=106.57 Aligned_cols=166 Identities=12% Similarity=0.059 Sum_probs=102.5
Q ss_pred CCCChhHHHHHHhccCChHHHHHHHHHH-HccCCCCCCCCHHHHHHHHH----HHhhcCCCEEEEEcCcc--CHHHHHHH
Q 023645 66 ISVTPPLYDYILRNVREPEILRQLREET-AGMRGSQMQVSPDQAQLLAM----LVQILGAQRCIEVGVYT--GYSSLAIA 138 (279)
Q Consensus 66 ~~~~~~l~~Y~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~~~l~~----l~~~~~~~~VLEiG~G~--G~~t~~la 138 (279)
.....++++|+..--...++=+++-+.. ...|.. ..+......++.. +.......+|||||||+ +..+..++
T Consensus 21 ~p~~aR~yd~~LgGk~n~~~Dr~~~~~~~~~~P~~-~~~a~~nr~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la 99 (277)
T 3giw_A 21 SAHSARIYDYIIGGKDYYPADKEAGDAMSREWPAL-PVHMRANRDWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIA 99 (277)
T ss_dssp SCCHHHHHHHHTTCSCCCHHHHHHHHHHHHHCTTH-HHHHHHHHHHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHH
T ss_pred CCCcchhheeecCCccCCHHHHHHHHHHHHhCCCH-HHHHHHHHHHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHH
Confidence 3455689999997654444333333333 223321 1112222233333 33334557999999997 44556666
Q ss_pred HHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE-----EEEEeCCcc---c---
Q 023645 139 LVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD-----FAFVDAEKR---M--- 207 (279)
Q Consensus 139 ~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD-----lI~id~~~~---~--- 207 (279)
+...++++|+++|.|+.|++.|++.+...+ ..+++++++|+.+....+......+.|| .|+++...+ +
T Consensus 100 ~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~-~~~~~~v~aD~~~~~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~ 178 (277)
T 3giw_A 100 QSVAPESRVVYVDNDPIVLTLSQGLLASTP-EGRTAYVEADMLDPASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDD 178 (277)
T ss_dssp HHHCTTCEEEEEECCHHHHHTTHHHHCCCS-SSEEEEEECCTTCHHHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGC
T ss_pred HHHCCCCEEEEEeCChHHHHHHHHHhccCC-CCcEEEEEecccChhhhhcccccccccCcCCcchHHhhhhHhcCCchhh
Confidence 544337899999999999999999886433 2469999999976522110000013344 466665421 1
Q ss_pred hHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 208 YQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 208 ~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
....+..+.+.|+|||+|++.....+
T Consensus 179 p~~~l~~l~~~L~PGG~Lvls~~~~d 204 (277)
T 3giw_A 179 AVGIVRRLLEPLPSGSYLAMSIGTAE 204 (277)
T ss_dssp HHHHHHHHHTTSCTTCEEEEEEECCT
T ss_pred HHHHHHHHHHhCCCCcEEEEEeccCC
Confidence 45789999999999999999876544
No 224
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.29 E-value=1.1e-12 Score=113.64 Aligned_cols=110 Identities=15% Similarity=0.077 Sum_probs=78.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCC----------------------------
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGV---------------------------- 169 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~---------------------------- 169 (279)
.++.+|||||||+|..+..++... ..+|+++|+|+.+++.|+++++....
T Consensus 54 ~~g~~vLDiGCG~G~~~~~~~~~~--~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 54 LQGDTLIDIGSGPTIYQVLAACDS--FQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp CCEEEEEESSCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCceEEEeCCCccHHHHHHHHhh--hcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 356799999999998776655431 13799999999999999987754210
Q ss_pred CCcEE-EEEcChhhHHHHHHhCCCCCcEEEEEEeCC-------ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 170 SHKVK-IKHGLAADSLKALILNGEASSYDFAFVDAE-------KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 170 ~~~v~-~~~gd~~~~l~~~~~~~~~~~fDlI~id~~-------~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
..++. ++++|+.+..+. .....++||+|++... ..++...++.+.++|||||.+++.+..
T Consensus 132 ~~~i~~~~~~D~~~~~~~--~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LKPGG~li~~~~~ 199 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPL--APAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLKPGGHLVTTVTL 199 (263)
T ss_dssp HHHEEEEEECCTTSSSTT--TTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEES
T ss_pred HhhhheEEeccccCCCCC--CccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcCCCcEEEEEEee
Confidence 11244 888888753210 0001468999998643 244567899999999999999998654
No 225
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=99.27 E-value=1e-10 Score=105.57 Aligned_cols=107 Identities=11% Similarity=0.090 Sum_probs=85.2
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..+..+|||||||+|..+..+++..| +.+++..|. |++++.|+++++..+ .++|+++.+|+.+.. ...+
T Consensus 177 ~~~~~~v~DvGgG~G~~~~~l~~~~p-~~~~~~~dl-p~v~~~a~~~~~~~~-~~rv~~~~gD~~~~~--------~~~~ 245 (353)
T 4a6d_A 177 LSVFPLMCDLGGGAGALAKECMSLYP-GCKITVFDI-PEVVWTAKQHFSFQE-EEQIDFQEGDFFKDP--------LPEA 245 (353)
T ss_dssp GGGCSEEEEETCTTSHHHHHHHHHCS-SCEEEEEEC-HHHHHHHHHHSCC---CCSEEEEESCTTTSC--------CCCC
T ss_pred cccCCeEEeeCCCCCHHHHHHHHhCC-CceeEeccC-HHHHHHHHHhhhhcc-cCceeeecCccccCC--------CCCc
Confidence 44567999999999999999999998 789999998 889999998876544 578999999987531 3467
Q ss_pred EEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 197 DFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 197 DlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
|++++.... +.....++++.+.|+|||.+++.+.+.+.
T Consensus 246 D~~~~~~vlh~~~d~~~~~iL~~~~~al~pgg~lli~e~~~~~ 288 (353)
T 4a6d_A 246 DLYILARVLHDWADGKCSHLLERIYHTCKPGGGILVIESLLDE 288 (353)
T ss_dssp SEEEEESSGGGSCHHHHHHHHHHHHHHCCTTCEEEEEECCCCT
T ss_pred eEEEeeeecccCCHHHHHHHHHHHHhhCCCCCEEEEEEeeeCC
Confidence 999886542 23456799999999999988887766543
No 226
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.27 E-value=7.4e-12 Score=109.63 Aligned_cols=110 Identities=10% Similarity=0.024 Sum_probs=76.1
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh-----------------CCC-----------
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA-----------------GVS----------- 170 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~-----------------g~~----------- 170 (279)
++.+|||||||+|..+..++.. + ..+|+|+|+|+.+++.|+++++.. +..
T Consensus 71 ~~~~vLDiGcG~G~~~~l~~~~-~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 148 (289)
T 2g72_A 71 SGRTLIDIGSGPTVYQLLSACS-H-FEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLR 148 (289)
T ss_dssp CCSEEEEETCTTCCGGGTTGGG-G-CSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHH
T ss_pred CCCeEEEECCCcChHHHHhhcc-C-CCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHH
Confidence 6789999999999955444432 2 469999999999999998865421 110
Q ss_pred -CcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCc-------cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 171 -HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-------RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 171 -~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~-------~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
..++++.+|+.+.++.-.....+++||+|++.... .+....++.+.++|||||.|++.+.
T Consensus 149 ~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~LkpGG~l~~~~~ 216 (289)
T 2g72_A 149 ARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLRPGGHLLLIGA 216 (289)
T ss_dssp HHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred hhhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 01567777876522210000113569999987652 2467889999999999999999753
No 227
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.27 E-value=4e-11 Score=99.09 Aligned_cols=107 Identities=15% Similarity=0.188 Sum_probs=79.5
Q ss_pred CCHHHHHHHHHHHh---hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC
Q 023645 103 VSPDQAQLLAMLVQ---ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (279)
Q Consensus 103 ~~~~~~~~l~~l~~---~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (279)
........+...+. ..++.+|||+|||+|..+..+++. + ..+|+++|+++.+++.|++++. +++++++|
T Consensus 32 ~~~~~~~~l~~~~~~~~~~~~~~vlD~gcG~G~~~~~l~~~-~-~~~v~~vD~~~~~~~~a~~~~~------~~~~~~~d 103 (200)
T 1ne2_A 32 TDASTAAYFLIEIYNDGNIGGRSVIDAGTGNGILACGSYLL-G-AESVTAFDIDPDAIETAKRNCG------GVNFMVAD 103 (200)
T ss_dssp CCHHHHHHHHHHHHHHTSSBTSEEEEETCTTCHHHHHHHHT-T-BSEEEEEESCHHHHHHHHHHCT------TSEEEECC
T ss_pred CCHHHHHHHHHHHHhcCCCCCCEEEEEeCCccHHHHHHHHc-C-CCEEEEEECCHHHHHHHHHhcC------CCEEEECc
Confidence 34444444434333 236779999999999999999886 3 3589999999999999999875 58999999
Q ss_pred hhhHHHHHHhCCCCCcEEEEEEeCCcc-----chHHHHHHHHccCCCCcEEEEe
Q 023645 180 AADSLKALILNGEASSYDFAFVDAEKR-----MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 180 ~~~~l~~~~~~~~~~~fDlI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+.+. .++||+|+++.+.. ....+++.+.+.+ |+++++.
T Consensus 104 ~~~~---------~~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~--g~~~~~~ 146 (200)
T 1ne2_A 104 VSEI---------SGKYDTWIMNPPFGSVVKHSDRAFIDKAFETS--MWIYSIG 146 (200)
T ss_dssp GGGC---------CCCEEEEEECCCC-------CHHHHHHHHHHE--EEEEEEE
T ss_pred HHHC---------CCCeeEEEECCCchhccCchhHHHHHHHHHhc--CcEEEEE
Confidence 9763 36899999997622 2346788888887 6665554
No 228
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.26 E-value=2.3e-11 Score=100.36 Aligned_cols=99 Identities=14% Similarity=0.170 Sum_probs=71.6
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHH------------
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL------------ 184 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l------------ 184 (279)
.++.+|||+|||+|.++..+++..++ +++|+++|+++.. .. .+++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~-~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PI-PNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CC-TTCEEEECCTTTTSSCCC--------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CC-CCceEEEccccchhhhhhcccccccc
Confidence 45679999999999999999998863 5899999999842 12 35899999986532
Q ss_pred -------HHHHhCCCCCcEEEEEEeCCccc-------h-------HHHHHHHHccCCCCcEEEEe
Q 023645 185 -------KALILNGEASSYDFAFVDAEKRM-------Y-------QEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 185 -------~~~~~~~~~~~fDlI~id~~~~~-------~-------~~~l~~~~~~Lk~gG~lv~d 228 (279)
..+.....+++||+|+++..... . ...++.+.++|+|||.+++.
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~~~~d~~~~~~~~~~~l~~~~~~LkpgG~lv~~ 153 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGNKIDDHLNSCELTLSITHFMEQYINIGGTYIVK 153 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 00000001468999999864221 1 13677889999999999984
No 229
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.26 E-value=2.8e-11 Score=106.20 Aligned_cols=100 Identities=17% Similarity=0.180 Sum_probs=78.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
..++.....+...+...++.+|||||||+|..+..+++. +.+|+++|+++.+++.+++++...+..++++++++|+.
T Consensus 11 l~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~ 87 (285)
T 1zq9_A 11 LKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVL 87 (285)
T ss_dssp ECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTT
T ss_pred cCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEccee
Confidence 345555555555555667789999999999999999987 35999999999999999999877666567999999997
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCccchHHHH
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYF 212 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l 212 (279)
+.. ..+||+|+++.+.......+
T Consensus 88 ~~~--------~~~fD~vv~nlpy~~~~~~~ 110 (285)
T 1zq9_A 88 KTD--------LPFFDTCVANLPYQISSPFV 110 (285)
T ss_dssp TSC--------CCCCSEEEEECCGGGHHHHH
T ss_pred ccc--------chhhcEEEEecCcccchHHH
Confidence 541 24799999987755443333
No 230
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.25 E-value=1.7e-11 Score=105.92 Aligned_cols=95 Identities=19% Similarity=0.204 Sum_probs=77.2
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++.++ +.+|+++|+++.+++.|+++. .++.+..+|+.+. + . .+++||
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~~v~~vD~s~~~~~~a~~~~------~~~~~~~~d~~~~-~-~----~~~~fD 150 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALP-EITTFGLDVSKVAIKAAAKRY------PQVTFCVASSHRL-P-F----SDTSMD 150 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCT-TSEEEEEESCHHHHHHHHHHC------TTSEEEECCTTSC-S-B----CTTCEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCC-CCeEEEEeCCHHHHHHHHHhC------CCcEEEEcchhhC-C-C----CCCcee
Confidence 4677999999999999999999875 679999999999999998764 2478999998643 1 1 147899
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+|++.... ..++.+.++|+|||.+++..
T Consensus 151 ~v~~~~~~----~~l~~~~~~L~pgG~l~~~~ 178 (269)
T 1p91_A 151 AIIRIYAP----CKAEELARVVKPGGWVITAT 178 (269)
T ss_dssp EEEEESCC----CCHHHHHHHEEEEEEEEEEE
T ss_pred EEEEeCCh----hhHHHHHHhcCCCcEEEEEE
Confidence 99986553 34788999999999998854
No 231
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.25 E-value=3.9e-11 Score=111.31 Aligned_cols=122 Identities=13% Similarity=0.205 Sum_probs=90.9
Q ss_pred CCCCCHH-HHHHHHHHHh---hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEE
Q 023645 100 QMQVSPD-QAQLLAMLVQ---ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKI 175 (279)
Q Consensus 100 ~~~~~~~-~~~~l~~l~~---~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~ 175 (279)
+.+.++. ...++..+.. ..++.+|||+|||+|.+++.+++. ..+|+++|+++++++.|+++++.+++. ++++
T Consensus 263 f~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~-~v~f 338 (433)
T 1uwv_A 263 FIQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQ-NVTF 338 (433)
T ss_dssp CCCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCC-SEEE
T ss_pred ccccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCC-ceEE
Confidence 3444444 3334444433 345679999999999999999986 479999999999999999999998886 6999
Q ss_pred EEcChhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 176 KHGLAADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 176 ~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+++|+.+.++.+.. .+++||+|++|.+.....+.++.+.+ ++|++++++.
T Consensus 339 ~~~d~~~~l~~~~~--~~~~fD~Vv~dPPr~g~~~~~~~l~~-~~p~~ivyvs 388 (433)
T 1uwv_A 339 YHENLEEDVTKQPW--AKNGFDKVLLDPARAGAAGVMQQIIK-LEPIRIVYVS 388 (433)
T ss_dssp EECCTTSCCSSSGG--GTTCCSEEEECCCTTCCHHHHHHHHH-HCCSEEEEEE
T ss_pred EECCHHHHhhhhhh--hcCCCCEEEECCCCccHHHHHHHHHh-cCCCeEEEEE
Confidence 99999874332100 14689999999987666666665543 7898888774
No 232
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.25 E-value=3.2e-11 Score=108.45 Aligned_cols=118 Identities=12% Similarity=0.038 Sum_probs=91.7
Q ss_pred CCCHHHHHHHHHHHh----hcCCCEEEEEcCccCHHHHHHHHHCCCC----CEEEEEeCChhHHHHHHHHHHHhCCCCcE
Q 023645 102 QVSPDQAQLLAMLVQ----ILGAQRCIEVGVYTGYSSLAIALVLPES----GCLVACERDARSLEVAKKYYERAGVSHKV 173 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~----~~~~~~VLEiG~G~G~~t~~la~~~~~~----~~v~~iD~s~~~~~~a~~~~~~~g~~~~v 173 (279)
.++.....++..++. ..++.+|||+|||+|..+..+++.++.. .+++|+|+++.+++.|+.++...|+ ++
T Consensus 109 ~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~--~~ 186 (344)
T 2f8l_A 109 MTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ--KM 186 (344)
T ss_dssp CCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC--CC
T ss_pred CChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC--Cc
Confidence 355566666555543 2345799999999999999999887532 7899999999999999999998887 48
Q ss_pred EEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccc---------------------hHHHHHHHHccCCCCcEEEEe
Q 023645 174 KIKHGLAADSLKALILNGEASSYDFAFVDAEKRM---------------------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 174 ~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~---------------------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.++++|+.+... .++||+|+.+++... ...+++.+.+.|+|||.+++-
T Consensus 187 ~i~~~D~l~~~~-------~~~fD~Ii~NPPfg~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v 255 (344)
T 2f8l_A 187 TLLHQDGLANLL-------VDPVDVVISDLPVGYYPDDENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFL 255 (344)
T ss_dssp EEEESCTTSCCC-------CCCEEEEEEECCCSEESCHHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEE
T ss_pred eEEECCCCCccc-------cCCccEEEECCCCCCcCchhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEE
Confidence 999999875321 478999999977211 125789999999999988773
No 233
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.23 E-value=2e-11 Score=106.41 Aligned_cols=105 Identities=17% Similarity=0.220 Sum_probs=77.0
Q ss_pred CCCEEEEEcCccCH----HHHHHHHHCCC---CCEEEEEeCChhHHHHHHHHHH--------------H---------hC
Q 023645 119 GAQRCIEVGVYTGY----SSLAIALVLPE---SGCLVACERDARSLEVAKKYYE--------------R---------AG 168 (279)
Q Consensus 119 ~~~~VLEiG~G~G~----~t~~la~~~~~---~~~v~~iD~s~~~~~~a~~~~~--------------~---------~g 168 (279)
++.+|+|+|||+|. .++.+++.++. +.+|+|+|+|+++++.|+++.- + .|
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45699999999998 55666666442 3599999999999999998641 0 00
Q ss_pred -------CCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEe
Q 023645 169 -------VSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 169 -------~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+.++|+|.++|..+. + +. ..++||+|++.... ......++.+.+.|+|||+|++.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~-~-~~---~~~~fDlI~crnvliyf~~~~~~~vl~~~~~~L~pgG~L~lg 251 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEK-Q-YN---VPGPFDAIFCRNVMIYFDKTTQEDILRRFVPLLKPDGLLFAG 251 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCS-S-CC---CCCCEEEEEECSSGGGSCHHHHHHHHHHHGGGEEEEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCC-C-CC---cCCCeeEEEECCchHhCCHHHHHHHHHHHHHHhCCCcEEEEE
Confidence 113699999998752 1 10 03689999996542 23467899999999999999984
No 234
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=99.23 E-value=1.2e-11 Score=113.89 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=75.6
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++. +.+|+++|+++.+++.|++. +......+...+..+.++.. +++||
T Consensus 106 ~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~-----~~~fD 173 (416)
T 4e2x_A 106 GPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT-----EGPAN 173 (416)
T ss_dssp SSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH-----HCCEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC-----CCCEE
Confidence 45779999999999999999975 46999999999999998875 33322222222222233322 48999
Q ss_pred EEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 198 FAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 198 lI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+|++... ..+...+++.+.++|||||++++...
T Consensus 174 ~I~~~~vl~h~~d~~~~l~~~~r~LkpgG~l~i~~~ 209 (416)
T 4e2x_A 174 VIYAANTLCHIPYVQSVLEGVDALLAPDGVFVFEDP 209 (416)
T ss_dssp EEEEESCGGGCTTHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEECChHHhcCCHHHHHHHHHHHcCCCeEEEEEeC
Confidence 9998865 34577899999999999999999743
No 235
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.23 E-value=3.9e-11 Score=99.10 Aligned_cols=96 Identities=14% Similarity=0.191 Sum_probs=69.8
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HH---HHHhCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LK---ALILNGE 192 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~---~~~~~~~ 192 (279)
.++.+|||+|||+|.++..+++. +++|+++|+++.. .. .+++++++|+.+. .. .......
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~-~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EI-AGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CC-TTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cC-CCeEEEEccccCHHHHHHHHHHhhccc
Confidence 45789999999999999999986 5899999999852 12 3599999998652 11 1110000
Q ss_pred CCcEEEEEEeCCcc--------------chHHHHHHHHccCCCCcEEEEe
Q 023645 193 ASSYDFAFVDAEKR--------------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 193 ~~~fDlI~id~~~~--------------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.++||+|++|.... .....++.+.++|||||.+++.
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~~~d~~~~~~l~~~~l~~a~~~LkpGG~lv~k 138 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIPSRDHAVSYQIGQRVMEIAVRYLRNGGNVLLK 138 (191)
T ss_dssp CSSEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCcceEEecCCCcCCCCCcccCHHHHHHHHHHHHHHHHHHccCCCEEEEE
Confidence 14899999986421 1235677788999999999975
No 236
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.21 E-value=2.2e-11 Score=102.25 Aligned_cols=98 Identities=23% Similarity=0.361 Sum_probs=77.8
Q ss_pred HHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 113 MLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 113 ~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
.+....++.+|||||||+|..+..++.. +++|+++.+++.++++ +++++.+|+.+. + . .
T Consensus 41 ~l~~~~~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~--------~~~~~~~d~~~~-~-~----~ 99 (219)
T 1vlm_A 41 AVKCLLPEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR--------GVFVLKGTAENL-P-L----K 99 (219)
T ss_dssp HHHHHCCSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT--------TCEEEECBTTBC-C-S----C
T ss_pred HHHHhCCCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc--------CCEEEEcccccC-C-C----C
Confidence 3444455789999999999999877642 9999999999998876 478999998653 1 1 1
Q ss_pred CCcEEEEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 193 ASSYDFAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 193 ~~~fDlI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+++||+|++... ..+...+++.+.++|+|||.+++....
T Consensus 100 ~~~fD~v~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 100 DESFDFALMVTTICFVDDPERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp TTCEEEEEEESCGGGSSCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCeeEEEEcchHhhccCHHHHHHHHHHHcCCCcEEEEEEeC
Confidence 468999998865 345678999999999999999997654
No 237
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=99.20 E-value=1.7e-11 Score=110.40 Aligned_cols=106 Identities=12% Similarity=0.069 Sum_probs=82.0
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..+..+|||||||+|..+..+++..| +.+++++|+ +..+. ++..+..+..++++++.+|+.+. + . +|
T Consensus 182 ~~~~~~vLDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~---~-----p-~~ 248 (348)
T 3lst_A 182 FPATGTVADVGGGRGGFLLTVLREHP-GLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE---V-----P-HA 248 (348)
T ss_dssp CCSSEEEEEETCTTSHHHHHHHHHCT-TEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC---C-----C-CC
T ss_pred ccCCceEEEECCccCHHHHHHHHHCC-CCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC---C-----C-CC
Confidence 34567999999999999999999987 689999999 44444 44444456667899999999632 1 3 89
Q ss_pred EEEEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 197 DFAFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 197 DlI~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
|+|++....+ .....++++.+.|||||.|++.+...+..
T Consensus 249 D~v~~~~vlh~~~d~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~ 292 (348)
T 3lst_A 249 DVHVLKRILHNWGDEDSVRILTNCRRVMPAHGRVLVIDAVVPEG 292 (348)
T ss_dssp SEEEEESCGGGSCHHHHHHHHHHHHHTCCTTCEEEEEECCBCSS
T ss_pred cEEEEehhccCCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCCC
Confidence 9999875422 23578999999999999999988766543
No 238
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.19 E-value=1.6e-11 Score=102.88 Aligned_cols=98 Identities=15% Similarity=0.075 Sum_probs=77.4
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||+|||+|..+..+++. + .+++++|+++.+++.++++. .+++.+|+.+..... .+++||
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~--~~~~~~D~~~~~~~~~~~~~--------~~~~~~d~~~~~~~~----~~~~fD 95 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G--TRVSGIEAFPEAAEQAKEKL--------DHVVLGDIETMDMPY----EEEQFD 95 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T--CEEEEEESSHHHHHHHHTTS--------SEEEESCTTTCCCCS----CTTCEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C--CeEEEEeCCHHHHHHHHHhC--------CcEEEcchhhcCCCC----CCCccC
Confidence 46779999999999999999986 3 79999999999998887643 267888886421111 147899
Q ss_pred EEEEeCC---ccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 198 FAFVDAE---KRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 198 lI~id~~---~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+|++... ..+...+++.+.++|+|||.+++...
T Consensus 96 ~v~~~~~l~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 131 (230)
T 3cc8_A 96 CVIFGDVLEHLFDPWAVIEKVKPYIKQNGVILASIP 131 (230)
T ss_dssp EEEEESCGGGSSCHHHHHHHTGGGEEEEEEEEEEEE
T ss_pred EEEECChhhhcCCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 9998765 23457889999999999999999653
No 239
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.19 E-value=4.8e-11 Score=102.24 Aligned_cols=145 Identities=9% Similarity=0.031 Sum_probs=100.1
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|-+++.++...+ ..+|+++|+++.+++.+++++..+|+. .++.+.|.....+ .++||
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p-~a~y~a~DId~~~le~a~~~l~~~g~~--~~~~v~D~~~~~p-------~~~~D 200 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPA-ETVYIASDIDARLVGFVDEALTRLNVP--HRTNVADLLEDRL-------DEPAD 200 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCT-TCEEEEEESBHHHHHHHHHHHHHTTCC--EEEEECCTTTSCC-------CSCCS
T ss_pred CCCceeeeeccCccHHHHHHHhhCC-CCEEEEEeCCHHHHHHHHHHHHhcCCC--ceEEEeeecccCC-------CCCcc
Confidence 4588999999999999999887655 789999999999999999999998886 6888888865433 68999
Q ss_pred EEEEeCCccc-----hHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeecCCc
Q 023645 198 FAFVDAEKRM-----YQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPIGDG 272 (279)
Q Consensus 198 lI~id~~~~~-----~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~~~G 272 (279)
++++.-..+. ....+ .+...|+++|++|--+.-.-|. ... .-..-..+.++....+.++....+-+++-
T Consensus 201 vaL~lkti~~Le~q~kg~g~-~ll~aL~~~~vvVSfp~ksl~G---rs~--gm~~~Y~~~~e~~~~~~g~~~~~~~~~nE 274 (281)
T 3lcv_B 201 VTLLLKTLPCLETQQRGSGW-EVIDIVNSPNIVVTFPTKSLGQ---RSK--GMFQNYSQSFESQARERSCRIQRLEIGNE 274 (281)
T ss_dssp EEEETTCHHHHHHHSTTHHH-HHHHHSSCSEEEEEEECC------------CHHHHHHHHHHHHHHHHTCCEEEEEETTE
T ss_pred hHHHHHHHHHhhhhhhHHHH-HHHHHhCCCCEEEeccchhhcC---CCc--chhhHHHHHHHHHHHhcCCceeeeeecCe
Confidence 9998654222 12345 7889999999999876622111 110 01111223333333334446667777777
Q ss_pred eEEEEE
Q 023645 273 MTICQK 278 (279)
Q Consensus 273 ~~i~~~ 278 (279)
+..+.+
T Consensus 275 l~y~i~ 280 (281)
T 3lcv_B 275 LIYVIQ 280 (281)
T ss_dssp EEEEEC
T ss_pred eEEEec
Confidence 665544
No 240
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.18 E-value=7.3e-12 Score=109.89 Aligned_cols=97 Identities=14% Similarity=0.085 Sum_probs=71.7
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEE-EcChhhHHH-HHHhCCCCCcE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK-HGLAADSLK-ALILNGEASSY 196 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~-~gd~~~~l~-~~~~~~~~~~f 196 (279)
++.+|||||||||.++..+++. + .++|+++|+++.|++.+.+. ..++... ..++..... .+ ...+|
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~-g-a~~V~aVDvs~~mL~~a~r~------~~rv~~~~~~ni~~l~~~~l----~~~~f 152 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN-G-AKLVYAVDVGTNQLVWKLRQ------DDRVRSMEQYNFRYAEPVDF----TEGLP 152 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSSSCSCHHHHT------CTTEEEECSCCGGGCCGGGC----TTCCC
T ss_pred cccEEEecCCCccHHHHHHHhC-C-CCEEEEEECCHHHHHHHHHh------CcccceecccCceecchhhC----CCCCC
Confidence 4679999999999999998876 2 46999999999999875432 1234333 233322111 11 12359
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
|+|++|.........+..+.++|+|||.+++
T Consensus 153 D~v~~d~sf~sl~~vL~e~~rvLkpGG~lv~ 183 (291)
T 3hp7_A 153 SFASIDVSFISLNLILPALAKILVDGGQVVA 183 (291)
T ss_dssp SEEEECCSSSCGGGTHHHHHHHSCTTCEEEE
T ss_pred CEEEEEeeHhhHHHHHHHHHHHcCcCCEEEE
Confidence 9999998877788899999999999999887
No 241
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=99.18 E-value=4.6e-11 Score=103.22 Aligned_cols=108 Identities=18% Similarity=0.139 Sum_probs=79.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHH-------CCC----CCEEEEEeCCh--------------hHHHHHHHHHHHh------
Q 023645 119 GAQRCIEVGVYTGYSSLAIALV-------LPE----SGCLVACERDA--------------RSLEVAKKYYERA------ 167 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~-------~~~----~~~v~~iD~s~--------------~~~~~a~~~~~~~------ 167 (279)
++.+|||||+|+|++++.+++. .|. ..+++++|..| +..+.|++.++..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999999998765 342 25899999987 3444677776641
Q ss_pred ----CCC---CcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCc-----c-chHHHHHHHHccCCCCcEEEE
Q 023645 168 ----GVS---HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-----R-MYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 168 ----g~~---~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~-----~-~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
.+. .+++++.||+.+.++.+.... ...||+||+|+.. + .+.++|+.+.++|+|||+|+.
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~-~~~~D~iflD~fsp~~~p~lw~~~~l~~l~~~L~pGG~l~t 211 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSL-NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLAT 211 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGG-TTCEEEEEECSSCTTTCGGGCCHHHHHHHHHHEEEEEEEEE
T ss_pred hhheeccCCceEEEEEECcHHHHHhhccccc-CCeEEEEEECCCCcccChhhcCHHHHHHHHHHcCCCcEEEE
Confidence 121 357899999998777551100 1379999999742 1 367899999999999999996
No 242
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.18 E-value=7.9e-11 Score=104.00 Aligned_cols=97 Identities=14% Similarity=0.231 Sum_probs=73.1
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
.+++.....+...+...++.+|||||||+|..+..+++. +++|+++|+++.+++.++++++..+. ++++++++|+.
T Consensus 25 l~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~-~~v~~~~~D~~ 100 (299)
T 2h1r_A 25 LKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGY-NNLEVYEGDAI 100 (299)
T ss_dssp ECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEC----CC
T ss_pred ecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCC-CceEEEECchh
Confidence 445555555555566667789999999999999999875 46999999999999999999987776 46999999987
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCccchHH
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKRMYQE 210 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~~~~~ 210 (279)
+.. ..+||+|+++.+......
T Consensus 101 ~~~--------~~~~D~Vv~n~py~~~~~ 121 (299)
T 2h1r_A 101 KTV--------FPKFDVCTANIPYKISSP 121 (299)
T ss_dssp SSC--------CCCCSEEEEECCGGGHHH
T ss_pred hCC--------cccCCEEEEcCCcccccH
Confidence 541 358999999987554433
No 243
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.18 E-value=1.1e-10 Score=95.85 Aligned_cols=100 Identities=10% Similarity=0.084 Sum_probs=72.2
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCC--------CEEEEEeCChhHHHHHHHHHHHhCCCCcEEEE-EcChhhHHH--H
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPES--------GCLVACERDARSLEVAKKYYERAGVSHKVKIK-HGLAADSLK--A 186 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~--------~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~-~gd~~~~l~--~ 186 (279)
.++.+|||+|||+|.++..+++.++.. ++|+++|+++.. .. .+++++ .+|+.+... .
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~-~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PL-EGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CC-TTCEEECSCCTTSHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cC-CCCeEEEeccCCCHHHHHH
Confidence 457799999999999999999987633 799999999842 12 358888 888764321 1
Q ss_pred HHhCCCCCcEEEEEEeCCcc-------ch-------HHHHHHHHccCCCCcEEEEeC
Q 023645 187 LILNGEASSYDFAFVDAEKR-------MY-------QEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 187 ~~~~~~~~~fDlI~id~~~~-------~~-------~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+.....+++||+|+++.... +. ...++.+.++|+|||.+++..
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 11101135899999875311 11 367888999999999999864
No 244
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=99.17 E-value=7.8e-12 Score=106.54 Aligned_cols=98 Identities=13% Similarity=0.183 Sum_probs=67.6
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc-ChhhHH-HHHHhCCCCCc
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAADSL-KALILNGEASS 195 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l-~~~~~~~~~~~ 195 (279)
..+++|||||||+|..+..+++. + ..+|+|+|+++++++.++++.. ++..... ++.... ..+ +...
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~-g-~~~V~gvDis~~ml~~a~~~~~------~~~~~~~~~~~~~~~~~~----~~~~ 103 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQN-G-AKLVYALDVGTNQLAWKIRSDE------RVVVMEQFNFRNAVLADF----EQGR 103 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT-T-CSEEEEECSSCCCCCHHHHTCT------TEEEECSCCGGGCCGGGC----CSCC
T ss_pred CCCCEEEEEccCCCHHHHHHHhc-C-CCEEEEEcCCHHHHHHHHHhCc------cccccccceEEEeCHhHc----CcCC
Confidence 34679999999999999999986 2 2599999999999998766432 2222211 221110 011 0123
Q ss_pred EEEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 196 YDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 196 fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
||.+.+|........++..+.++|||||.+++
T Consensus 104 ~d~~~~D~v~~~l~~~l~~i~rvLkpgG~lv~ 135 (232)
T 3opn_A 104 PSFTSIDVSFISLDLILPPLYEILEKNGEVAA 135 (232)
T ss_dssp CSEEEECCSSSCGGGTHHHHHHHSCTTCEEEE
T ss_pred CCEEEEEEEhhhHHHHHHHHHHhccCCCEEEE
Confidence 56666666555557889999999999999988
No 245
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=99.16 E-value=1.6e-10 Score=101.22 Aligned_cols=106 Identities=15% Similarity=0.206 Sum_probs=87.4
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh--C--CCCcEEEEEcChhhHHHHHHhCCC
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--G--VSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g--~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
...+++||-||.|.|..+..+++..+ ..+|+.+|+++..++.+++.+... + -..|++++.+|+..++...
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~-v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~----- 154 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKN-VESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT----- 154 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTT-CCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS-----
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCC-cceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc-----
Confidence 35688999999999999999987644 579999999999999999988642 2 1468999999999877543
Q ss_pred CCcEEEEEEeCCcc-------chHHHHHHHHccCCCCcEEEEe
Q 023645 193 ASSYDFAFVDAEKR-------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 193 ~~~fDlI~id~~~~-------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.++||+|++|.... ...++++.+.+.|+|||+++..
T Consensus 155 ~~~yDvIi~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 155 SQTFDVIISDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp SCCEEEEEESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred cccCCEEEEeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 57899999996411 2457899999999999999985
No 246
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=99.15 E-value=9.4e-11 Score=106.41 Aligned_cols=99 Identities=15% Similarity=0.127 Sum_probs=79.0
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ ..+++++.+|+.+.+ ... |+
T Consensus 203 ~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~d~~~~~--------p~~-D~ 264 (368)
T 3reo_A 203 GLTTIVDVGGGTGAVASMIVAKYP-SINAINFDL-PHVIQDAPA-------FSGVEHLGGDMFDGV--------PKG-DA 264 (368)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTCC--------CCC-SE
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCC-CCEEEEEeh-HHHHHhhhh-------cCCCEEEecCCCCCC--------CCC-CE
Confidence 467999999999999999999987 789999999 888766653 246999999997522 223 99
Q ss_pred EEEeCCcc-----chHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 199 AFVDAEKR-----MYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 199 I~id~~~~-----~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
|++....+ .....++++.+.|+|||.|++.+...+..
T Consensus 265 v~~~~vlh~~~~~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 306 (368)
T 3reo_A 265 IFIKWICHDWSDEHCLKLLKNCYAALPDHGKVIVAEYILPPS 306 (368)
T ss_dssp EEEESCGGGBCHHHHHHHHHHHHHHSCTTCEEEEEECCCCSS
T ss_pred EEEechhhcCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 99865532 23468999999999999999988776543
No 247
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.15 E-value=4.4e-11 Score=103.45 Aligned_cols=89 Identities=18% Similarity=0.224 Sum_probs=72.2
Q ss_pred HHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCCh-------hHHHHHHHHHHHhCCCCcEEEEEcChhhH
Q 023645 111 LAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDA-------RSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 111 l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~-------~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (279)
+...+...++.+|||+|||+|..++.++.. +++|+++|+++ ++++.|+++.+.+++.++++++++|+.+.
T Consensus 75 l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~ 151 (258)
T 2r6z_A 75 IAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQ 151 (258)
T ss_dssp HHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHH
T ss_pred HHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHH
Confidence 334444455679999999999999999985 47999999999 99999999988888777799999999887
Q ss_pred HHHHHhCCCCCcEEEEEEeCC
Q 023645 184 LKALILNGEASSYDFAFVDAE 204 (279)
Q Consensus 184 l~~~~~~~~~~~fDlI~id~~ 204 (279)
++.+... .++||+|++|+.
T Consensus 152 l~~~~~~--~~~fD~V~~dP~ 170 (258)
T 2r6z_A 152 MPALVKT--QGKPDIVYLDPM 170 (258)
T ss_dssp HHHHHHH--HCCCSEEEECCC
T ss_pred HHhhhcc--CCCccEEEECCC
Confidence 7655210 168999999875
No 248
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=99.14 E-value=1.4e-10 Score=96.80 Aligned_cols=96 Identities=15% Similarity=0.132 Sum_probs=73.7
Q ss_pred HHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHH
Q 023645 108 AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 108 ~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
..++..+....++.+|||||||+|..+..++ .+++++|+++. +++++++|+.+. + .
T Consensus 56 ~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~----------------~~~~~~~d~~~~-~-~ 111 (215)
T 2zfu_A 56 DRIARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL----------------DPRVTVCDMAQV-P-L 111 (215)
T ss_dssp HHHHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS----------------STTEEESCTTSC-S-C
T ss_pred HHHHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC----------------CceEEEeccccC-C-C
Confidence 3455555555667899999999999887662 58999999997 367888888652 1 1
Q ss_pred HhCCCCCcEEEEEEeCC--ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 188 ILNGEASSYDFAFVDAE--KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~--~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
.+++||+|++... ..+...+++.+.++|+|||.+++.+..
T Consensus 112 ----~~~~fD~v~~~~~l~~~~~~~~l~~~~~~L~~gG~l~i~~~~ 153 (215)
T 2zfu_A 112 ----EDESVDVAVFCLSLMGTNIRDFLEEANRVLKPGGLLKVAEVS 153 (215)
T ss_dssp ----CTTCEEEEEEESCCCSSCHHHHHHHHHHHEEEEEEEEEEECG
T ss_pred ----CCCCEeEEEEehhccccCHHHHHHHHHHhCCCCeEEEEEEcC
Confidence 1478999998754 355678999999999999999997643
No 249
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.14 E-value=6.3e-11 Score=108.96 Aligned_cols=110 Identities=15% Similarity=0.226 Sum_probs=84.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh
Q 023645 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (279)
Q Consensus 101 ~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (279)
..+.+....++..++...++.+|||+|||+|..+..+++..+...+++|+|+++.+++.| .+++++++|+
T Consensus 21 ~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a----------~~~~~~~~D~ 90 (421)
T 2ih2_A 21 VETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP----------PWAEGILADF 90 (421)
T ss_dssp CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC----------TTEEEEESCG
T ss_pred EeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC----------CCCcEEeCCh
Confidence 344566666666665544567999999999999999998763367999999999998776 3589999999
Q ss_pred hhHHHHHHhCCCCCcEEEEEEeCCc--------------c------------------chHHHHHHHHccCCCCcEEEE
Q 023645 181 ADSLKALILNGEASSYDFAFVDAEK--------------R------------------MYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 181 ~~~l~~~~~~~~~~~fDlI~id~~~--------------~------------------~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
.+..+ .++||+|+++++. . .+..+++.+.++|+|||.+++
T Consensus 91 ~~~~~-------~~~fD~Ii~NPPy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~ 162 (421)
T 2ih2_A 91 LLWEP-------GEAFDLILGNPPYGIVGEASKYPIHVFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVF 162 (421)
T ss_dssp GGCCC-------SSCEEEEEECCCCCCBSCTTTCSBCCCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEE
T ss_pred hhcCc-------cCCCCEEEECcCccCcccccccccccCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEE
Confidence 76421 4689999997541 1 112568888999999998877
No 250
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.13 E-value=1.5e-10 Score=105.97 Aligned_cols=118 Identities=14% Similarity=0.162 Sum_probs=87.8
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCC-------------------------------------CC
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE-------------------------------------SG 145 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~-------------------------------------~~ 145 (279)
+.+..+..+..++...++..|||.+||+|.+++.++..... ..
T Consensus 185 l~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 264 (393)
T 3k0b_A 185 IKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPL 264 (393)
T ss_dssp CCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCc
Confidence 45555555666666667789999999999999887764321 14
Q ss_pred EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCcc-------chHHHHHHHHcc
Q 023645 146 CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------MYQEYFELLLQL 218 (279)
Q Consensus 146 ~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~-------~~~~~l~~~~~~ 218 (279)
+|+|+|+++.+++.|+++++.+|+.++++++++|+.+... ..+||+|++|++.. ....++..+.+.
T Consensus 265 ~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~-------~~~fD~Iv~NPPYg~rl~~~~~l~~ly~~lg~~ 337 (393)
T 3k0b_A 265 NIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQT-------EDEYGVVVANPPYGERLEDEEAVRQLYREMGIV 337 (393)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCC-------CCCSCEEEECCCCCCSHHHHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCC-------CCCCCEEEECCCCccccCCchhHHHHHHHHHHH
Confidence 6999999999999999999999998889999999986532 46899999998742 233344444444
Q ss_pred CCC--CcEEEE
Q 023645 219 IRV--GGIIVI 227 (279)
Q Consensus 219 Lk~--gG~lv~ 227 (279)
|++ ||.+.+
T Consensus 338 lk~~~g~~~~i 348 (393)
T 3k0b_A 338 YKRMPTWSVYV 348 (393)
T ss_dssp HHTCTTCEEEE
T ss_pred HhcCCCCEEEE
Confidence 444 665554
No 251
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=99.13 E-value=2.3e-10 Score=103.66 Aligned_cols=99 Identities=16% Similarity=0.088 Sum_probs=79.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ ..+++++.+|+.+.+ ... |
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~-------~~~v~~~~~D~~~~~--------p~~-D 261 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYP-TIKGVNFDL-PHVISEAPQ-------FPGVTHVGGDMFKEV--------PSG-D 261 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC-------CTTEEEEECCTTTCC--------CCC-S
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCC-CCeEEEecC-HHHHHhhhh-------cCCeEEEeCCcCCCC--------CCC-C
Confidence 3568999999999999999999987 789999999 888766653 257999999997521 223 9
Q ss_pred EEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 198 FAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 198 lI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
+|++.... +.....++++.+.|+|||.+++.+...+.
T Consensus 262 ~v~~~~vlh~~~d~~~~~~L~~~~~~L~pgG~l~i~e~~~~~ 303 (364)
T 3p9c_A 262 TILMKWILHDWSDQHCATLLKNCYDALPAHGKVVLVQCILPV 303 (364)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHSCTTCEEEEEECCBCS
T ss_pred EEEehHHhccCCHHHHHHHHHHHHHHcCCCCEEEEEEeccCC
Confidence 99986543 33457899999999999999998877654
No 252
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.11 E-value=1.3e-09 Score=92.51 Aligned_cols=145 Identities=10% Similarity=-0.010 Sum_probs=94.1
Q ss_pred HhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 115 VQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
....++.+|||||||+|.+++.+. + ..+|+++|+++.+++.+++++...|. +.++.++|.....+ .+
T Consensus 101 ~~~~~p~~VLDlGCG~gpLal~~~---~-~~~y~a~DId~~~i~~ar~~~~~~g~--~~~~~v~D~~~~~~-------~~ 167 (253)
T 3frh_A 101 FSAETPRRVLDIACGLNPLALYER---G-IASVWGCDIHQGLGDVITPFAREKDW--DFTFALQDVLCAPP-------AE 167 (253)
T ss_dssp TSSCCCSEEEEETCTTTHHHHHHT---T-CSEEEEEESBHHHHHHHHHHHHHTTC--EEEEEECCTTTSCC-------CC
T ss_pred hcCCCCCeEEEecCCccHHHHHhc---c-CCeEEEEeCCHHHHHHHHHHHHhcCC--CceEEEeecccCCC-------CC
Confidence 333568899999999999998877 3 68999999999999999999988774 47899999875433 57
Q ss_pred cEEEEEEeCCc-----cchHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEEEeec
Q 023645 195 SYDFAFVDAEK-----RMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSISMVPI 269 (279)
Q Consensus 195 ~fDlI~id~~~-----~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~lp~ 269 (279)
+||+|++.-.. ......+ .+...|+++|++|--++-. +...... -.....+.++..........-.+-+
T Consensus 168 ~~DvvLllk~lh~LE~q~~~~~~-~ll~aL~~~~vvVsfPtks---l~Gr~~g--m~~~Y~~~~e~~~~~~~~~~~~~~~ 241 (253)
T 3frh_A 168 AGDLALIFKLLPLLEREQAGSAM-ALLQSLNTPRMAVSFPTRS---LGGRGKG--MEANYAAWFEGGLPAEFEIEDKKTI 241 (253)
T ss_dssp BCSEEEEESCHHHHHHHSTTHHH-HHHHHCBCSEEEEEEECC----------------CHHHHHHHHSCTTEEEEEEEEE
T ss_pred CcchHHHHHHHHHhhhhchhhHH-HHHHHhcCCCEEEEcChHH---hcCCCcc--hhhHHHHHHHHHhhccchhhhheec
Confidence 99999876431 1122333 6777999999998765321 1111100 0001222333333444455556667
Q ss_pred CCceEEEEE
Q 023645 270 GDGMTICQK 278 (279)
Q Consensus 270 ~~G~~i~~~ 278 (279)
++-+....+
T Consensus 242 ~nEl~~~i~ 250 (253)
T 3frh_A 242 GTELIYLIK 250 (253)
T ss_dssp TTEEEEEEE
T ss_pred CceEEEEEe
Confidence 776655443
No 253
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=99.11 E-value=1.3e-09 Score=98.24 Aligned_cols=124 Identities=13% Similarity=0.075 Sum_probs=97.8
Q ss_pred HHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCC-----CcEEEEEcCh
Q 023645 106 DQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVS-----HKVKIKHGLA 180 (279)
Q Consensus 106 ~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-----~~v~~~~gd~ 180 (279)
....+...++...++.+|||+++|.|.-|..++...+ ++.|+++|+++..++..++++++.+.. .++.+...|+
T Consensus 135 ~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~~-~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~ 213 (359)
T 4fzv_A 135 AASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTGC-CRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDG 213 (359)
T ss_dssp GGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTTC-EEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCG
T ss_pred HHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhcC-CCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCch
Confidence 3445566666777888999999999999999998655 678999999999999999999988764 4689999998
Q ss_pred hhHHHHHHhCCCCCcEEEEEEeCCccc---------------------------hHHHHHHHHccCCCCcEEEEeCCCCC
Q 023645 181 ADSLKALILNGEASSYDFAFVDAEKRM---------------------------YQEYFELLLQLIRVGGIIVIDNVLWH 233 (279)
Q Consensus 181 ~~~l~~~~~~~~~~~fDlI~id~~~~~---------------------------~~~~l~~~~~~Lk~gG~lv~dd~~~~ 233 (279)
....+.. .+.||.|++|++... ..+.++.+.++|||||+||...+-..
T Consensus 214 ~~~~~~~-----~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~ 288 (359)
T 4fzv_A 214 RKWGELE-----GDTYDRVLVDVPCTTDRHSLHEEENNIFKRSRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLS 288 (359)
T ss_dssp GGHHHHS-----TTCEEEEEEECCCCCHHHHTTCCTTCTTSGGGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCC
T ss_pred hhcchhc-----cccCCEEEECCccCCCCCcccccChhhhhhCCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCc
Confidence 7654432 578999999976211 13467778899999999999877654
Q ss_pred Cc
Q 023645 234 GK 235 (279)
Q Consensus 234 g~ 235 (279)
-.
T Consensus 289 ~~ 290 (359)
T 4fzv_A 289 HL 290 (359)
T ss_dssp TT
T ss_pred hh
Confidence 43
No 254
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.10 E-value=1.8e-10 Score=105.19 Aligned_cols=117 Identities=15% Similarity=0.125 Sum_probs=86.7
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCC-------------------------------------CCCE
Q 023645 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLP-------------------------------------ESGC 146 (279)
Q Consensus 104 ~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~-------------------------------------~~~~ 146 (279)
.+..+..+..++...++.+|||+|||+|.+++.++.... ...+
T Consensus 180 ~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~ 259 (385)
T 3ldu_A 180 RETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFK 259 (385)
T ss_dssp CHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCC
T ss_pred cHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCce
Confidence 444555555555556678999999999999998876532 1157
Q ss_pred EEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCcc-------chHHHHHHHHccC
Q 023645 147 LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------MYQEYFELLLQLI 219 (279)
Q Consensus 147 v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~-------~~~~~l~~~~~~L 219 (279)
|+|+|+++.+++.|++++..+|+.+.+++.++|+.+... ..+||+|++|++.. ....++..+.+.|
T Consensus 260 V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~-------~~~~D~Iv~NPPyg~rl~~~~~l~~ly~~lg~~l 332 (385)
T 3ldu_A 260 IYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKS-------EDEFGFIITNPPYGERLEDKDSVKQLYKELGYAF 332 (385)
T ss_dssp EEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCC-------SCBSCEEEECCCCCCSHHHHHHHHHHHHHHHHHH
T ss_pred EEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCc-------CCCCcEEEECCCCcCccCCHHHHHHHHHHHHHHH
Confidence 999999999999999999999998889999999987532 46899999998742 2334455554555
Q ss_pred CC--CcEEEE
Q 023645 220 RV--GGIIVI 227 (279)
Q Consensus 220 k~--gG~lv~ 227 (279)
++ |+.+.+
T Consensus 333 k~~~g~~~~i 342 (385)
T 3ldu_A 333 RKLKNWSYYL 342 (385)
T ss_dssp HTSBSCEEEE
T ss_pred hhCCCCEEEE
Confidence 54 655444
No 255
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.10 E-value=3.6e-10 Score=103.09 Aligned_cols=118 Identities=13% Similarity=0.112 Sum_probs=88.9
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCC-------------------------------------CC
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE-------------------------------------SG 145 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~-------------------------------------~~ 145 (279)
+.+..+..+..+....++..+||.+||+|.+.+..+..... ..
T Consensus 178 l~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~ 257 (384)
T 3ldg_A 178 IKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQL 257 (384)
T ss_dssp CCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCC
T ss_pred CcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCc
Confidence 44555555556666667789999999999999887764321 14
Q ss_pred EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCc-------cchHHHHHHHHcc
Q 023645 146 CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEK-------RMYQEYFELLLQL 218 (279)
Q Consensus 146 ~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~-------~~~~~~l~~~~~~ 218 (279)
+|+|+|+++.+++.|++|++.+|+.++++++++|+.+... ..+||+|++|++. .....++..+.+.
T Consensus 258 ~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~-------~~~fD~Iv~NPPYG~rl~~~~~l~~ly~~lg~~ 330 (384)
T 3ldg_A 258 DISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKT-------NKINGVLISNPPYGERLLDDKAVDILYNEMGET 330 (384)
T ss_dssp CEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCC-------CCCSCEEEECCCCTTTTSCHHHHHHHHHHHHHH
T ss_pred eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCc-------cCCcCEEEECCchhhccCCHHHHHHHHHHHHHH
Confidence 6999999999999999999999998889999999987532 3589999999873 2344455555555
Q ss_pred CCC--CcEEEE
Q 023645 219 IRV--GGIIVI 227 (279)
Q Consensus 219 Lk~--gG~lv~ 227 (279)
||+ ||.+.+
T Consensus 331 lk~~~g~~~~i 341 (384)
T 3ldg_A 331 FAPLKTWSQFI 341 (384)
T ss_dssp HTTCTTSEEEE
T ss_pred HhhCCCcEEEE
Confidence 555 765554
No 256
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.09 E-value=7.5e-10 Score=97.43 Aligned_cols=103 Identities=13% Similarity=0.053 Sum_probs=79.4
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh
Q 023645 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (279)
Q Consensus 101 ~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (279)
..+.+.....+...+...++.+|||||||+|..|..+++. ..+|+++|+++++++.+++++.. . .+++++++|+
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~~--~-~~v~vi~gD~ 105 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKEL--Y-NNIEIIWGDA 105 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHHH--C-SSEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhcc--C-CCeEEEECch
Confidence 4556666666666666677889999999999999999987 46999999999999999999873 2 3699999999
Q ss_pred hhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHH
Q 023645 181 ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELL 215 (279)
Q Consensus 181 ~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~ 215 (279)
.+.... +.+||.|+.+.+.......+..+
T Consensus 106 l~~~~~------~~~fD~Iv~NlPy~is~pil~~l 134 (295)
T 3gru_A 106 LKVDLN------KLDFNKVVANLPYQISSPITFKL 134 (295)
T ss_dssp TTSCGG------GSCCSEEEEECCGGGHHHHHHHH
T ss_pred hhCCcc------cCCccEEEEeCcccccHHHHHHH
Confidence 864211 35799999987755444444333
No 257
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.09 E-value=8e-10 Score=97.55 Aligned_cols=87 Identities=16% Similarity=0.093 Sum_probs=70.6
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
...++.+|||+|||+|..+..+++.++ +++|+++|.|+.+++.|+++++..+ ++++++++|+.+....+...+ ..+
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g--~~v~~v~~d~~~l~~~l~~~g-~~~ 98 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS--DRVSLFKVSYREADFLLKTLG-IEK 98 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT--TTEEEEECCGGGHHHHHHHTT-CSC
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC--CcEEEEECCHHHHHHHHHhcC-CCC
Confidence 345678999999999999999999987 7899999999999999999998777 579999999876432222111 258
Q ss_pred EEEEEEeCCcc
Q 023645 196 YDFAFVDAEKR 206 (279)
Q Consensus 196 fDlI~id~~~~ 206 (279)
||.|++|.+..
T Consensus 99 ~D~Vl~D~gvS 109 (301)
T 1m6y_A 99 VDGILMDLGVS 109 (301)
T ss_dssp EEEEEEECSCC
T ss_pred CCEEEEcCccc
Confidence 99999998643
No 258
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=99.06 E-value=1.1e-10 Score=106.00 Aligned_cols=99 Identities=15% Similarity=0.100 Sum_probs=79.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.++.+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ . .+++++.+|+.+. + .. ||
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~---~-----~~-~D 269 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYP-LIKGINFDL-PQVIENAPP------L-SGIEHVGGDMFAS---V-----PQ-GD 269 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------C-TTEEEEECCTTTC---C-----CC-EE
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCC-CCeEEEeCh-HHHHHhhhh------c-CCCEEEeCCcccC---C-----CC-CC
Confidence 3467999999999999999999987 689999999 888877664 1 3599999999752 1 23 99
Q ss_pred EEEEeCCcc---c--hHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 198 FAFVDAEKR---M--YQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 198 lI~id~~~~---~--~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
+|++....+ + ...+++.+.+.|+|||.+++.+...+.
T Consensus 270 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~pgG~l~i~e~~~~~ 311 (372)
T 1fp1_D 270 AMILKAVCHNWSDEKCIEFLSNCHKALSPNGKVIIVEFILPE 311 (372)
T ss_dssp EEEEESSGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEEECS
T ss_pred EEEEecccccCCHHHHHHHHHHHHHhcCCCCEEEEEEeccCC
Confidence 999876532 2 237899999999999999998776544
No 259
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.06 E-value=1.6e-10 Score=107.51 Aligned_cols=120 Identities=9% Similarity=0.075 Sum_probs=94.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCC------------CCCEEEEEeCChhHHHHHHHHHHHhC
Q 023645 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLP------------ESGCLVACERDARSLEVAKKYYERAG 168 (279)
Q Consensus 101 ~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~------------~~~~v~~iD~s~~~~~~a~~~~~~~g 168 (279)
..+++....++..++...++.+|||.|||+|.+...+++.+. ...+++|+|+++.+++.|+.++...|
T Consensus 153 fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g 232 (445)
T 2okc_A 153 YFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHG 232 (445)
T ss_dssp GCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTT
T ss_pred ccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhC
Confidence 345667777777777666678999999999999999887641 13579999999999999999998888
Q ss_pred CCC-cEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccc--------------------hHHHHHHHHccCCCCcEEEE
Q 023645 169 VSH-KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--------------------YQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 169 ~~~-~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~--------------------~~~~l~~~~~~Lk~gG~lv~ 227 (279)
... .+.++++|+..... ..+||+|+.+++... ...+++.+.++|+|||.+++
T Consensus 233 ~~~~~~~i~~gD~l~~~~-------~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~gG~~a~ 305 (445)
T 2okc_A 233 IGTDRSPIVCEDSLEKEP-------STLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLKTGGRAAV 305 (445)
T ss_dssp CCSSCCSEEECCTTTSCC-------SSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEEEEEEEEE
T ss_pred CCcCCCCEeeCCCCCCcc-------cCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhccCCEEEE
Confidence 753 57899999875421 358999999875221 14789999999999998865
No 260
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.05 E-value=3.6e-10 Score=108.31 Aligned_cols=102 Identities=18% Similarity=0.201 Sum_probs=77.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
..+.+|||||||+|..+..||+. +++|||||.++.+++.|+....+.|.. +++++++++.+..... ++++||
T Consensus 65 ~~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~-~~~~~~~~~~~~~~~~----~~~~fD 136 (569)
T 4azs_A 65 GRPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDF-AAEFRVGRIEEVIAAL----EEGEFD 136 (569)
T ss_dssp TSCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTS-EEEEEECCHHHHHHHC----CTTSCS
T ss_pred CCCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCC-ceEEEECCHHHHhhhc----cCCCcc
Confidence 35679999999999999999986 679999999999999999999877754 4999999998765432 257899
Q ss_pred EEEEeCCccchH-----HHHHHHHccCCCCcEEEE
Q 023645 198 FAFVDAEKRMYQ-----EYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 198 lI~id~~~~~~~-----~~l~~~~~~Lk~gG~lv~ 227 (279)
+|++-...++.. ..+..+.+.|+++|...+
T Consensus 137 ~v~~~e~~ehv~~~~~~~~~~~~~~tl~~~~~~~~ 171 (569)
T 4azs_A 137 LAIGLSVFHHIVHLHGIDEVKRLLSRLADVTQAVI 171 (569)
T ss_dssp EEEEESCHHHHHHHHCHHHHHHHHHHHHHHSSEEE
T ss_pred EEEECcchhcCCCHHHHHHHHHHHHHhccccceee
Confidence 999876644322 123344566777765444
No 261
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.05 E-value=3.3e-10 Score=103.81 Aligned_cols=77 Identities=16% Similarity=0.153 Sum_probs=67.3
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh--CCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA--GVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~--g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
+.+|||+|||+|..++.+++. +.+|+++|+++.+++.|+++++.. |+ ++++++++|+.+.++... .++||
T Consensus 94 g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl-~~i~~i~~Da~~~L~~~~----~~~fD 165 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEG-KDVNILTGDFKEYLPLIK----TFHPD 165 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTT-CEEEEEESCGGGSHHHHH----HHCCS
T ss_pred CCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCC-CcEEEEECcHHHhhhhcc----CCCce
Confidence 789999999999999999876 469999999999999999999988 88 579999999998765431 35899
Q ss_pred EEEEeCC
Q 023645 198 FAFVDAE 204 (279)
Q Consensus 198 lI~id~~ 204 (279)
+||+|++
T Consensus 166 vV~lDPP 172 (410)
T 3ll7_A 166 YIYVDPA 172 (410)
T ss_dssp EEEECCE
T ss_pred EEEECCC
Confidence 9999975
No 262
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=99.03 E-value=2.6e-10 Score=102.73 Aligned_cols=99 Identities=14% Similarity=0.130 Sum_probs=79.4
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.|++ . .+++++.+|+.+.+ ..||
T Consensus 187 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~~~---------p~~D 248 (352)
T 1fp2_A 187 DGLESIVDVGGGTGTTAKIICETFP-KLKCIVFDR-PQVVENLSG------S-NNLTYVGGDMFTSI---------PNAD 248 (352)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCT-TCEEEEEEC-HHHHTTCCC------B-TTEEEEECCTTTCC---------CCCS
T ss_pred ccCceEEEeCCCccHHHHHHHHHCC-CCeEEEeeC-HHHHhhccc------C-CCcEEEeccccCCC---------CCcc
Confidence 4568999999999999999999987 679999999 998887765 1 24999999986521 2499
Q ss_pred EEEEeCCcc---c--hHHHHHHHHccCCC---CcEEEEeCCCCCC
Q 023645 198 FAFVDAEKR---M--YQEYFELLLQLIRV---GGIIVIDNVLWHG 234 (279)
Q Consensus 198 lI~id~~~~---~--~~~~l~~~~~~Lk~---gG~lv~dd~~~~g 234 (279)
+|++....+ + ....++++.+.|+| ||.+++.+..++.
T Consensus 249 ~v~~~~~lh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 293 (352)
T 1fp2_A 249 AVLLKYILHNWTDKDCLRILKKCKEAVTNDGKRGKVTIIDMVIDK 293 (352)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHHSGGGCCCEEEEEECEECT
T ss_pred EEEeehhhccCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeecCC
Confidence 999876522 2 33789999999999 9999988776543
No 263
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.01 E-value=2.4e-09 Score=92.32 Aligned_cols=106 Identities=11% Similarity=0.064 Sum_probs=77.9
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh
Q 023645 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (279)
Q Consensus 101 ~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (279)
..+++.....+...+...++.+|||||||+|..|..+++. +++|+++|+++++++.+++++.. ..+++++++|+
T Consensus 11 FL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~---~~~v~~i~~D~ 84 (255)
T 3tqs_A 11 FLHDSFVLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ---QKNITIYQNDA 84 (255)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT---CTTEEEEESCT
T ss_pred cccCHHHHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh---CCCcEEEEcch
Confidence 3456666666666666777889999999999999999986 36999999999999999998864 34699999999
Q ss_pred hhH-HHHHHhCCCCCcEEEEEEeCCccchHHHHHHHH
Q 023645 181 ADS-LKALILNGEASSYDFAFVDAEKRMYQEYFELLL 216 (279)
Q Consensus 181 ~~~-l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~ 216 (279)
.+. ++.+. ..++|| |+.+.+..-....+..+.
T Consensus 85 ~~~~~~~~~---~~~~~~-vv~NlPY~is~~il~~ll 117 (255)
T 3tqs_A 85 LQFDFSSVK---TDKPLR-VVGNLPYNISTPLLFHLF 117 (255)
T ss_dssp TTCCGGGSC---CSSCEE-EEEECCHHHHHHHHHHHH
T ss_pred HhCCHHHhc---cCCCeE-EEecCCcccCHHHHHHHH
Confidence 875 22210 125788 777776544334444443
No 264
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.00 E-value=1.5e-10 Score=99.95 Aligned_cols=105 Identities=12% Similarity=0.142 Sum_probs=73.9
Q ss_pred HHHHHhhcCC--CEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC--------CCCcEEEEEcCh
Q 023645 111 LAMLVQILGA--QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--------VSHKVKIKHGLA 180 (279)
Q Consensus 111 l~~l~~~~~~--~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--------~~~~v~~~~gd~ 180 (279)
+...+...++ .+|||+|||+|..++.+++. +++|+++|.++.+.+.++++++.+. +.++++++++|+
T Consensus 78 l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~ 154 (258)
T 2oyr_A 78 VAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASS 154 (258)
T ss_dssp HHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCH
T ss_pred HHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCH
Confidence 3344444555 79999999999999999987 4689999999999888888776542 324799999999
Q ss_pred hhHHHHHHhCCCCCcEEEEEEeCCccch--HHHHHHHHccCCCCc
Q 023645 181 ADSLKALILNGEASSYDFAFVDAEKRMY--QEYFELLLQLIRVGG 223 (279)
Q Consensus 181 ~~~l~~~~~~~~~~~fDlI~id~~~~~~--~~~l~~~~~~Lk~gG 223 (279)
.+.++.+ .++||+||+|+..... ...+++..+.|++.+
T Consensus 155 ~~~L~~~-----~~~fDvV~lDP~y~~~~~saavkk~~~~lr~l~ 194 (258)
T 2oyr_A 155 LTALTDI-----TPRPQVVYLDPMFPHKQKSALVKKEMRVFQSLV 194 (258)
T ss_dssp HHHSTTC-----SSCCSEEEECCCCCCCCC-----HHHHHHHHHS
T ss_pred HHHHHhC-----cccCCEEEEcCCCCCcccchHHHHHHHHHHHhh
Confidence 8876543 3579999999863321 223344444554433
No 265
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=98.97 E-value=1.7e-09 Score=102.96 Aligned_cols=123 Identities=8% Similarity=-0.014 Sum_probs=94.8
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCC-----------------CCEEEEEeCChhHHHHHHH
Q 023645 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE-----------------SGCLVACERDARSLEVAKK 162 (279)
Q Consensus 100 ~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~-----------------~~~v~~iD~s~~~~~~a~~ 162 (279)
..-+++....++..++...++.+|+|.+||+|.+.+.+++.+.. ..+++|+|+++.+++.|+.
T Consensus 150 ~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~ 229 (541)
T 2ar0_A 150 QYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALM 229 (541)
T ss_dssp CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHH
T ss_pred eeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHH
Confidence 34456666777777776666789999999999999888876421 1379999999999999999
Q ss_pred HHHHhCCCC----cEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccc-----------------hHHHHHHHHccCCC
Q 023645 163 YYERAGVSH----KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM-----------------YQEYFELLLQLIRV 221 (279)
Q Consensus 163 ~~~~~g~~~----~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~-----------------~~~~l~~~~~~Lk~ 221 (279)
++...|... ++.++++|++...... ..+||+|+.+++... ...+++.+.+.|+|
T Consensus 230 nl~l~gi~~~~~~~~~I~~gDtL~~~~~~-----~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~ 304 (541)
T 2ar0_A 230 NCLLHDIEGNLDHGGAIRLGNTLGSDGEN-----LPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIETLHP 304 (541)
T ss_dssp HHHTTTCCCBGGGTBSEEESCTTSHHHHT-----SCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHHEEE
T ss_pred HHHHhCCCccccccCCeEeCCCccccccc-----ccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHHhCC
Confidence 998888764 2789999987653321 468999999876221 23688999999999
Q ss_pred CcEEEE
Q 023645 222 GGIIVI 227 (279)
Q Consensus 222 gG~lv~ 227 (279)
||.+++
T Consensus 305 gGr~a~ 310 (541)
T 2ar0_A 305 GGRAAV 310 (541)
T ss_dssp EEEEEE
T ss_pred CCEEEE
Confidence 998766
No 266
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.96 E-value=3.5e-09 Score=90.61 Aligned_cols=93 Identities=12% Similarity=0.079 Sum_probs=67.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 102 QVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 102 ~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
.+++.....+...+...++.+|||||||+|..+..+++.. ++|+++|+++++++.+++++.. .++++++++|+.
T Consensus 13 l~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~---~~~v~~~~~D~~ 86 (244)
T 1qam_A 13 ITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD---HDNFQVLNKDIL 86 (244)
T ss_dssp CCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT---CCSEEEECCCGG
T ss_pred cCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc---CCCeEEEEChHH
Confidence 4455555545444455567899999999999999999874 6999999999999999998763 246999999997
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCcc
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKR 206 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~ 206 (279)
+.... +...| .|+.+.+..
T Consensus 87 ~~~~~-----~~~~~-~vv~nlPy~ 105 (244)
T 1qam_A 87 QFKFP-----KNQSY-KIFGNIPYN 105 (244)
T ss_dssp GCCCC-----SSCCC-EEEEECCGG
T ss_pred hCCcc-----cCCCe-EEEEeCCcc
Confidence 64210 02345 466666543
No 267
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.95 E-value=2.5e-09 Score=93.78 Aligned_cols=90 Identities=20% Similarity=0.251 Sum_probs=67.9
Q ss_pred hcCCCEEEEEcCcc------CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEE-EEcChhhHHHHHHh
Q 023645 117 ILGAQRCIEVGVYT------GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKI-KHGLAADSLKALIL 189 (279)
Q Consensus 117 ~~~~~~VLEiG~G~------G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~-~~gd~~~~l~~~~~ 189 (279)
..++.+|||+|||+ |. ..+++..+++++|+++|+++. + .++++ +++|+.+...
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v-~~v~~~i~gD~~~~~~---- 120 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------V-SDADSTLIGDCATVHT---- 120 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------B-CSSSEEEESCGGGCCC----
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------C-CCCEEEEECccccCCc----
Confidence 34567999999955 55 556667776789999999998 1 24788 9999975321
Q ss_pred CCCCCcEEEEEEeCCcc--------------chHHHHHHHHccCCCCcEEEEeC
Q 023645 190 NGEASSYDFAFVDAEKR--------------MYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~~--------------~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.++||+|+++.... .+...++.+.+.|||||.+++..
T Consensus 121 ---~~~fD~Vvsn~~~~~~g~~~~d~~~~~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 121 ---ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp ---SSCEEEEEECCCCCC---CCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ---cCcccEEEEcCCccccccccccccchHHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 36899999974311 13478899999999999999964
No 268
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.93 E-value=1.7e-10 Score=100.18 Aligned_cols=100 Identities=11% Similarity=-0.061 Sum_probs=69.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHH-HHhCCCCcEEEE--EcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYY-ERAGVSHKVKIK--HGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-~~~g~~~~v~~~--~gd~~~~l~~~~~~~~~~ 194 (279)
.++.+|||||||+|.++..+++. ++|+++|+++ +...+++.. .......+++++ ++|+.+. + ++
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~-------~~ 139 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTL-P-------VE 139 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTS-C-------CC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHC-C-------CC
Confidence 45679999999999999999875 5899999998 422221110 000011158888 8898753 1 47
Q ss_pred cEEEEEEeCCc--cc-----h--HHHHHHHHccCCCCc--EEEEeCC
Q 023645 195 SYDFAFVDAEK--RM-----Y--QEYFELLLQLIRVGG--IIVIDNV 230 (279)
Q Consensus 195 ~fDlI~id~~~--~~-----~--~~~l~~~~~~Lk~gG--~lv~dd~ 230 (279)
+||+|++|... .. . ...++.+.++|+||| .+++...
T Consensus 140 ~fD~V~sd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~fv~kv~ 186 (265)
T 2oxt_A 140 RTDVIMCDVGESSPKWSVESERTIKILELLEKWKVKNPSADFVVKVL 186 (265)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHCTTCEEEEEES
T ss_pred CCcEEEEeCcccCCccchhHHHHHHHHHHHHHHhccCCCeEEEEEeC
Confidence 89999998541 01 1 136788889999999 9998543
No 269
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.93 E-value=3.3e-09 Score=92.22 Aligned_cols=104 Identities=15% Similarity=0.058 Sum_probs=78.3
Q ss_pred CCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC
Q 023645 100 QMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (279)
Q Consensus 100 ~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (279)
...+++.....+...+...++ +|||||||+|..|..+++. +++|+++|+++++++.+++++. ..+++++++|
T Consensus 28 nfL~d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~----~~~v~vi~~D 99 (271)
T 3fut_A 28 NFLVSEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLS----GLPVRLVFQD 99 (271)
T ss_dssp CEECCHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTT----TSSEEEEESC
T ss_pred cccCCHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcC----CCCEEEEECC
Confidence 345667666666666666777 9999999999999999986 3689999999999999999875 2469999999
Q ss_pred hhhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHH
Q 023645 180 AADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLL 216 (279)
Q Consensus 180 ~~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~ 216 (279)
+.+....- ...+|.|+.+.+..-....+..+.
T Consensus 100 ~l~~~~~~-----~~~~~~iv~NlPy~iss~il~~ll 131 (271)
T 3fut_A 100 ALLYPWEE-----VPQGSLLVANLPYHIATPLVTRLL 131 (271)
T ss_dssp GGGSCGGG-----SCTTEEEEEEECSSCCHHHHHHHH
T ss_pred hhhCChhh-----ccCccEEEecCcccccHHHHHHHh
Confidence 98652110 136899998877554444444444
No 270
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.92 E-value=2.7e-10 Score=100.81 Aligned_cols=96 Identities=10% Similarity=0.042 Sum_probs=67.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeC----ChhHHHHHHHHHHHhCCCCcEEEEEc-ChhhHHHHHHhCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACER----DARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGE 192 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~----s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~~~~~~~ 192 (279)
.++.+|||+|||+|.++..+++. ++|+++|+ ++.+++.+. .+..+ .++++++++ |+.+. +
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~~--~~~~~-~~~v~~~~~~D~~~l-~------- 145 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPIP--MSTYG-WNLVRLQSGVDVFFI-P------- 145 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCCC--CCSTT-GGGEEEECSCCTTTS-C-------
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHHH--hhhcC-CCCeEEEeccccccC-C-------
Confidence 34679999999999999999975 48999999 554332110 11111 146999999 88643 1
Q ss_pred CCcEEEEEEeCCcc--c----h---HHHHHHHHccCCCCcEEEEe
Q 023645 193 ASSYDFAFVDAEKR--M----Y---QEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 193 ~~~fDlI~id~~~~--~----~---~~~l~~~~~~Lk~gG~lv~d 228 (279)
.++||+|++|.... . . ...+..+.++|||||.++++
T Consensus 146 ~~~fD~V~sd~~~~~g~~~~d~~~~l~~L~~~~~~LkpGG~~v~k 190 (305)
T 2p41_A 146 PERCDTLLCDIGESSPNPTVEAGRTLRVLNLVENWLSNNTQFCVK 190 (305)
T ss_dssp CCCCSEEEECCCCCCSSHHHHHHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred cCCCCEEEECCccccCcchhhHHHHHHHHHHHHHHhCCCCEEEEE
Confidence 46899999986531 1 1 14677788999999999985
No 271
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.91 E-value=2.3e-09 Score=96.68 Aligned_cols=99 Identities=13% Similarity=0.076 Sum_probs=78.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
.+..+|||||||+|..+..+++..| +.+++++|+ +.+++.+++ . .+++++.+|+.+ + ...||
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~p-~~~~~~~D~-~~~~~~a~~------~-~~v~~~~~d~~~--~-------~~~~D 253 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIFP-HLKCTVFDQ-PQVVGNLTG------N-ENLNFVGGDMFK--S-------IPSAD 253 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHCT-TSEEEEEEC-HHHHSSCCC------C-SSEEEEECCTTT--C-------CCCCS
T ss_pred cCCCEEEEECCCcCHHHHHHHHHCC-CCeEEEecc-HHHHhhccc------C-CCcEEEeCccCC--C-------CCCce
Confidence 4668999999999999999999987 679999999 788766654 2 349999999975 1 13599
Q ss_pred EEEEeCCcc---c--hHHHHHHHHccCCC---CcEEEEeCCCCCC
Q 023645 198 FAFVDAEKR---M--YQEYFELLLQLIRV---GGIIVIDNVLWHG 234 (279)
Q Consensus 198 lI~id~~~~---~--~~~~l~~~~~~Lk~---gG~lv~dd~~~~g 234 (279)
+|++....+ + ....++.+.+.|+| ||.+++.+...+.
T Consensus 254 ~v~~~~vlh~~~d~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~~ 298 (358)
T 1zg3_A 254 AVLLKWVLHDWNDEQSLKILKNSKEAISHKGKDGKVIIIDISIDE 298 (358)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHTGGGGGGCEEEEEECEECT
T ss_pred EEEEcccccCCCHHHHHHHHHHHHHhCCCCCCCcEEEEEEeccCC
Confidence 999876522 2 34889999999999 9999987776543
No 272
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=98.90 E-value=3.7e-09 Score=101.61 Aligned_cols=100 Identities=12% Similarity=0.076 Sum_probs=77.0
Q ss_pred CCEEEEEcCccCHHHHHHHHH---CCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 120 AQRCIEVGVYTGYSSLAIALV---LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~---~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
...|||+|||+|..+...+++ .....+|++||.++ +...|++..+.+++.++|++++||+.+.- + .+++
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~--L-----PEKV 429 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWV--A-----PEKA 429 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCC--C-----SSCE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceecc--C-----Cccc
Confidence 357999999999985554443 33234799999997 67788999999999999999999998752 1 5799
Q ss_pred EEEEEeCC-----ccchHHHHHHHHccCCCCcEEEE
Q 023645 197 DFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 197 DlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
|+|+...- .+...+.+....++|||||+++=
T Consensus 430 DIIVSEwMG~fLl~E~mlevL~Ardr~LKPgGimiP 465 (637)
T 4gqb_A 430 DIIVSELLGSFADNELSPECLDGAQHFLKDDGVSIP 465 (637)
T ss_dssp EEEECCCCBTTBGGGCHHHHHHHHGGGEEEEEEEES
T ss_pred CEEEEEcCcccccccCCHHHHHHHHHhcCCCcEEcc
Confidence 99986421 44455667666799999999863
No 273
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.90 E-value=1.1e-10 Score=101.86 Aligned_cols=99 Identities=6% Similarity=-0.084 Sum_probs=69.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHH-HHhCCCCcEEEE--EcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYY-ERAGVSHKVKIK--HGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~-~~~g~~~~v~~~--~gd~~~~l~~~~~~~~~~ 194 (279)
.++.+|||+|||+|.++..+++. ++|+++|+++ +...+++.. .......+++++ ++|+.+. + ++
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l-~-------~~ 147 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKM-E-------PF 147 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGC-C-------CC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhC-C-------CC
Confidence 35679999999999999999875 5899999998 432222110 000111158898 8998753 1 47
Q ss_pred cEEEEEEeCCcc--c-----h--HHHHHHHHccCCCCc--EEEEeC
Q 023645 195 SYDFAFVDAEKR--M-----Y--QEYFELLLQLIRVGG--IIVIDN 229 (279)
Q Consensus 195 ~fDlI~id~~~~--~-----~--~~~l~~~~~~Lk~gG--~lv~dd 229 (279)
+||+|++|.... . . ...++.+.++|+||| .++++.
T Consensus 148 ~fD~Vvsd~~~~~~~~~~d~~~~l~~L~~~~r~LkpGG~~~~v~~~ 193 (276)
T 2wa2_A 148 QADTVLCDIGESNPTAAVEASRTLTVLNVISRWLEYNQGCGFCVKV 193 (276)
T ss_dssp CCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHHHSTTCEEEEEE
T ss_pred CcCEEEECCCcCCCchhhhHHHHHHHHHHHHHHhccCCCcEEEEEe
Confidence 899999986410 1 1 136788889999999 999854
No 274
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.88 E-value=5.5e-09 Score=94.23 Aligned_cols=146 Identities=14% Similarity=0.131 Sum_probs=102.0
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHh---CC----CCcEEEEEcChhhHHHHHHhCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERA---GV----SHKVKIKHGLAADSLKALILNG 191 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~---g~----~~~v~~~~gd~~~~l~~~~~~~ 191 (279)
++++||-||.|.|..+..+++. + ..+|+.+|++++.++.+++.+... .. .++++++.+|+.+++....+.
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~-~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~- 281 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-K-PKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE- 281 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-C-CSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH-
T ss_pred CCCeEEEECCCcHHHHHHHHhc-C-CceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc-
Confidence 5789999999999999999875 4 379999999999999999986421 11 246899999999988754322
Q ss_pred CCCcEEEEEEeCCc-------------cchHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhh
Q 023645 192 EASSYDFAFVDAEK-------------RMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLME 258 (279)
Q Consensus 192 ~~~~fDlI~id~~~-------------~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~ 258 (279)
.++||+|++|... -...++++.+.+.|+|||+++...-. +. . ...+..+.+.+..
T Consensus 282 -~~~yDvIIvDl~D~~~s~~p~g~a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s----~~----~---~~~~~~i~~tl~~ 349 (381)
T 3c6k_A 282 -GREFDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQGNC----VN----L---TEALSLYEEQLGR 349 (381)
T ss_dssp -TCCEEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEEEEE----TT----C---HHHHHHHHHHHTT
T ss_pred -cCceeEEEECCCCCcccCcccCcchHHHHHHHHHHHHHhcCCCCEEEEecCC----Cc----c---hhHHHHHHHHHHH
Confidence 4689999999521 11356788999999999999985311 11 0 1124455555544
Q ss_pred C-CCeEE----EEeec---CCceEEEEEC
Q 023645 259 D-ERVSI----SMVPI---GDGMTICQKR 279 (279)
Q Consensus 259 ~-~~~~~----~~lp~---~~G~~i~~~~ 279 (279)
- +.+.. +.+|. ..|+.+|.|+
T Consensus 350 vF~~v~~~~~~~~VPSy~~~W~F~~aSK~ 378 (381)
T 3c6k_A 350 LYCPVEFSKEIVCVPSYLELWVFYTVWKK 378 (381)
T ss_dssp SSSCEEEEEEEECCGGGSSCEEEEEEEEC
T ss_pred hCCcceEeeEEEEecCCCCceeeeEEECC
Confidence 2 33432 23453 4688888874
No 275
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.86 E-value=5.2e-11 Score=101.99 Aligned_cols=112 Identities=10% Similarity=0.142 Sum_probs=78.8
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH
Q 023645 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 104 ~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (279)
.+.....+...+...++.+|||||||+|..+..+++.. ++|+++|+++++++.+++++. ..++++++++|+.+.
T Consensus 14 ~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~---~~~~v~~~~~D~~~~ 87 (245)
T 1yub_A 14 SEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK---LNTRVTLIHQDILQF 87 (245)
T ss_dssp CTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT---TCSEEEECCSCCTTT
T ss_pred CHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc---cCCceEEEECChhhc
Confidence 33344444444445567799999999999999999873 699999999999999888765 235799999999764
Q ss_pred HHHHHhCCCCCcEEEEEEeCCccc----hH----------HHH----HHHHccCCCCcEEEE
Q 023645 184 LKALILNGEASSYDFAFVDAEKRM----YQ----------EYF----ELLLQLIRVGGIIVI 227 (279)
Q Consensus 184 l~~~~~~~~~~~fDlI~id~~~~~----~~----------~~l----~~~~~~Lk~gG~lv~ 227 (279)
. + ..+++| .|+.+.+... .. .++ +.+.++|+|||.+.+
T Consensus 88 ~--~---~~~~~f-~vv~n~Py~~~~~~~~~~~~~~~~~~~~lm~q~e~a~rll~~~G~l~v 143 (245)
T 1yub_A 88 Q--F---PNKQRY-KIVGNIPYHLSTQIIKKVVFESRASDIYLIVEEGFYKRTLDIHRTLGL 143 (245)
T ss_dssp T--C---CCSSEE-EEEEECCSSSCHHHHHHHHHHCCCEEEEEEEESSHHHHHHCGGGSHHH
T ss_pred C--c---ccCCCc-EEEEeCCccccHHHHHHHHhCCCCCeEEEEeeHHHHHHHhCCCCchhh
Confidence 2 1 002578 6777754221 11 122 557789999998765
No 276
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.86 E-value=3.6e-09 Score=100.60 Aligned_cols=157 Identities=13% Similarity=0.162 Sum_probs=107.9
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCC--------------CCEEEEEeCChhHHHHHHHH
Q 023645 98 GSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE--------------SGCLVACERDARSLEVAKKY 163 (279)
Q Consensus 98 ~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~--------------~~~v~~iD~s~~~~~~a~~~ 163 (279)
.+..-+++....++..++...++ +|+|.+||+|.+.+.+++.+.. ..+++|+|+++.++..|+.+
T Consensus 224 ~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~N 302 (544)
T 3khk_A 224 GGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMN 302 (544)
T ss_dssp STTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHH
T ss_pred CCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHH
Confidence 34556778888888887765444 9999999999998887654320 35899999999999999999
Q ss_pred HHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccc--------------------------------hHHH
Q 023645 164 YERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM--------------------------------YQEY 211 (279)
Q Consensus 164 ~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~--------------------------------~~~~ 211 (279)
+..+|+..++.+.++|.+..... ...+||+|+.+++... ...+
T Consensus 303 l~l~gi~~~i~i~~gDtL~~~~~-----~~~~fD~Iv~NPPf~~~~~~~~~~~~d~r~~~g~~~~~~~~~~~~~~~~~~F 377 (544)
T 3khk_A 303 MVIRGIDFNFGKKNADSFLDDQH-----PDLRADFVMTNPPFNMKDWWHEKLADDPRWTINTNGEKRILTPPTGNANFAW 377 (544)
T ss_dssp HHHTTCCCBCCSSSCCTTTSCSC-----TTCCEEEEEECCCSSCCSCCCGGGTTCGGGEECCC--CEECCCCTTCTHHHH
T ss_pred HHHhCCCcccceeccchhcCccc-----ccccccEEEECCCcCCccccchhhhhhhhhhcCcccccccccCCCcchhHHH
Confidence 99989876665688887643111 1468999999876221 1257
Q ss_pred HHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEE-Eee
Q 023645 212 FELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSIS-MVP 268 (279)
Q Consensus 212 l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~lp 268 (279)
++.+.+.|+|||.+++ ++.+|.+... .. +-..+.++|.++..++++ .+|
T Consensus 378 l~~~l~~Lk~gGr~ai--VlP~g~L~~~---~~---~~~~iRk~Lle~~~l~aII~LP 427 (544)
T 3khk_A 378 MLHMLYHLAPTGSMAL--LLANGSMSSN---TN---NEGEIRKTLVEQDLVECMVALP 427 (544)
T ss_dssp HHHHHHTEEEEEEEEE--EEETHHHHCC---GG---GHHHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHhccCceEEE--EecchhhhcC---cc---hHHHHHHHHHhCCcHhEEEECC
Confidence 8899999999998655 2222222111 00 124455666677777654 455
No 277
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.85 E-value=1.7e-08 Score=88.11 Aligned_cols=110 Identities=13% Similarity=0.095 Sum_probs=75.7
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC
Q 023645 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL 179 (279)
Q Consensus 101 ~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd 179 (279)
..+++.....+...+...++.+|||||||+|..|..+++..+. +++|+++|+++++++.++++. ..+++++++|
T Consensus 24 fL~d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~-----~~~v~~i~~D 98 (279)
T 3uzu_A 24 FLVDHGVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF-----GELLELHAGD 98 (279)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH-----GGGEEEEESC
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc-----CCCcEEEECC
Confidence 4456666655666666667889999999999999999987542 245999999999999999883 3469999999
Q ss_pred hhhH-HHHHHhCCCCCcEEEEEEeCCccchHHHHHHHH
Q 023645 180 AADS-LKALILNGEASSYDFAFVDAEKRMYQEYFELLL 216 (279)
Q Consensus 180 ~~~~-l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~ 216 (279)
+.+. ++.+...+ ....+.|+.+.+..-....+..+.
T Consensus 99 ~~~~~~~~~~~~~-~~~~~~vv~NlPY~iss~il~~ll 135 (279)
T 3uzu_A 99 ALTFDFGSIARPG-DEPSLRIIGNLPYNISSPLLFHLM 135 (279)
T ss_dssp GGGCCGGGGSCSS-SSCCEEEEEECCHHHHHHHHHHHG
T ss_pred hhcCChhHhcccc-cCCceEEEEccCccccHHHHHHHH
Confidence 9874 22221000 013456777776544444444443
No 278
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=98.82 E-value=2.6e-08 Score=94.55 Aligned_cols=158 Identities=13% Similarity=0.149 Sum_probs=112.0
Q ss_pred CCCCCCCHHHHHHHHHHHh----hcCCCEEEEEcCccCHHHHHHHHHCC--CCCEEEEEeCChhHHHHHHHHHHHhCCC-
Q 023645 98 GSQMQVSPDQAQLLAMLVQ----ILGAQRCIEVGVYTGYSSLAIALVLP--ESGCLVACERDARSLEVAKKYYERAGVS- 170 (279)
Q Consensus 98 ~~~~~~~~~~~~~l~~l~~----~~~~~~VLEiG~G~G~~t~~la~~~~--~~~~v~~iD~s~~~~~~a~~~~~~~g~~- 170 (279)
.+..-+++....++..++. ..++.+|+|.+||+|.+.+.+++.+. ...+++|+|+++.++..|+.++..+|..
T Consensus 196 ~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~ 275 (542)
T 3lkd_A 196 AGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPI 275 (542)
T ss_dssp CSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCG
T ss_pred CCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCc
Confidence 3455678888888888877 34667999999999999999988863 2468999999999999999999988885
Q ss_pred CcEEEEEcChhhHH-HHHHhCCCCCcEEEEEEeCCccc----------------h----------HHHHHHHHccCC-CC
Q 023645 171 HKVKIKHGLAADSL-KALILNGEASSYDFAFVDAEKRM----------------Y----------QEYFELLLQLIR-VG 222 (279)
Q Consensus 171 ~~v~~~~gd~~~~l-~~~~~~~~~~~fDlI~id~~~~~----------------~----------~~~l~~~~~~Lk-~g 222 (279)
+++.+.++|.+... +. ....+||+|+.+++... + ..+++.+.+.|+ +|
T Consensus 276 ~~~~I~~gDtL~~d~p~----~~~~~fD~IvaNPPf~~~~~~~~~~~~d~rf~~~G~~~~~s~~~~~Fl~~~l~~Lk~~g 351 (542)
T 3lkd_A 276 ENQFLHNADTLDEDWPT----QEPTNFDGVLMNPPYSAKWSASSGFMDDPRFSPFGKLAPKSKADFAFLLHGYYHLKQDN 351 (542)
T ss_dssp GGEEEEESCTTTSCSCC----SSCCCBSEEEECCCTTCCCCCCGGGGGSTTTGGGSSCCCTTCCHHHHHHHHHHTBCTTT
T ss_pred CccceEecceecccccc----cccccccEEEecCCcCCccccchhhhhhhhhhhhhhcCCCchhhHHHHHHHHHHhCCCc
Confidence 46899999987531 10 11478999999865110 1 237888999999 99
Q ss_pred cEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEE-Eee
Q 023645 223 GIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSIS-MVP 268 (279)
Q Consensus 223 G~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~lp 268 (279)
|.+++ ++-+|.+... . +-..+.++|.++..++++ .+|
T Consensus 352 Gr~a~--VlP~g~Lf~~----~---~~~~iRk~Lle~~~l~~II~LP 389 (542)
T 3lkd_A 352 GVMAI--VLPHGVLFRG----N---AEGTIRKALLEEGAIDTVIGLP 389 (542)
T ss_dssp CEEEE--EEETHHHHCC----T---HHHHHHHHHHHTTCEEEEEECC
T ss_pred eeEEE--EecchHhhCC----c---hhHHHHHHHHhCCceeEEEEcc
Confidence 98755 2222222110 0 124456666777777754 355
No 279
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.78 E-value=1.3e-08 Score=99.58 Aligned_cols=121 Identities=13% Similarity=0.117 Sum_probs=87.7
Q ss_pred CCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHC---C-------------------------------------
Q 023645 103 VSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVL---P------------------------------------- 142 (279)
Q Consensus 103 ~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~---~------------------------------------- 142 (279)
+.+..+..+..++...++..|||.+||+|.+.+.++... +
T Consensus 174 l~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~ 253 (703)
T 3v97_A 174 IKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLA 253 (703)
T ss_dssp SCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccc
Confidence 455555656666665667899999999999998877642 1
Q ss_pred -CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCcc-------chHHHHHH
Q 023645 143 -ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------MYQEYFEL 214 (279)
Q Consensus 143 -~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~-------~~~~~l~~ 214 (279)
...+|+|+|+++.+++.|++|++.+|+.+.+++.++|+.+..+.. ..++||+|+++++.. ....+++.
T Consensus 254 ~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~----~~~~~d~Iv~NPPYG~Rlg~~~~l~~ly~~ 329 (703)
T 3v97_A 254 EYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPL----PKGPYGTVLSNPPYGERLDSEPALIALHSL 329 (703)
T ss_dssp HCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSC----TTCCCCEEEECCCCCC---CCHHHHHHHHH
T ss_pred cCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCcccc----ccCCCCEEEeCCCccccccchhHHHHHHHH
Confidence 125899999999999999999999999988999999998642110 123899999998732 22333333
Q ss_pred ---HHccCCCCcEEEE
Q 023645 215 ---LLQLIRVGGIIVI 227 (279)
Q Consensus 215 ---~~~~Lk~gG~lv~ 227 (279)
.++.+.|||.+.+
T Consensus 330 l~~~lk~~~~g~~~~i 345 (703)
T 3v97_A 330 LGRIMKNQFGGWNLSL 345 (703)
T ss_dssp HHHHHHHHCTTCEEEE
T ss_pred HHHHHHhhCCCCeEEE
Confidence 3444567887655
No 280
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.75 E-value=3.1e-08 Score=85.01 Aligned_cols=115 Identities=17% Similarity=0.104 Sum_probs=79.5
Q ss_pred CCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh
Q 023645 101 MQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA 180 (279)
Q Consensus 101 ~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~ 180 (279)
...++.....+...+...++.+|||||||+|..+..+++. + ..+|+++|+++.+++.++++ + ..+++++++|+
T Consensus 13 fl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~-~-~~~v~avEid~~~~~~~~~~----~-~~~v~~i~~D~ 85 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH-P-LKKLYVIELDREMVENLKSI----G-DERLEVINEDA 85 (249)
T ss_dssp CEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS-C-CSEEEEECCCHHHHHHHTTS----C-CTTEEEECSCT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc-C-CCeEEEEECCHHHHHHHHhc----c-CCCeEEEEcch
Confidence 3455655555555666667789999999999999999976 2 47999999999999999876 2 24699999999
Q ss_pred hhH-HHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccC--CCCcEEEEe
Q 023645 181 ADS-LKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLI--RVGGIIVID 228 (279)
Q Consensus 181 ~~~-l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~L--k~gG~lv~d 228 (279)
.+. ++.. .+.| .|+.+.+..-....+..+.... -+.+++++.
T Consensus 86 ~~~~~~~~-----~~~~-~vv~NlPy~i~~~il~~ll~~~~~~~~~~~m~Q 130 (249)
T 3ftd_A 86 SKFPFCSL-----GKEL-KVVGNLPYNVASLIIENTVYNKDCVPLAVFMVQ 130 (249)
T ss_dssp TTCCGGGS-----CSSE-EEEEECCTTTHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred hhCChhHc-----cCCc-EEEEECchhccHHHHHHHHhcCCCCceEEEEEe
Confidence 764 2211 1234 6777777655555555554322 344555553
No 281
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.74 E-value=4.5e-08 Score=94.27 Aligned_cols=106 Identities=10% Similarity=-0.042 Sum_probs=75.9
Q ss_pred CCEEEEEcCccCHHHHHHHHHCC------------CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHH
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLP------------ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~------------~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
.+.|||+|||+|..+...+.+.. ...+|++||.++.+....+.... +++.++|+++++|+.+.....
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 45899999999999754433321 13499999999987765555544 789999999999998863211
Q ss_pred HhCCCCCcEEEEEEeCC-----ccchHHHHHHHHccCCCCcEEEE
Q 023645 188 ILNGEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
... ..++.|+|+...- .+...+.+..+.+.|||||+++=
T Consensus 489 ~~~-~~ekVDIIVSElmGsfl~nEL~pe~Ld~v~r~Lkp~Gi~iP 532 (745)
T 3ua3_A 489 KDR-GFEQPDIIVSELLGSFGDNELSPECLDGVTGFLKPTTISIP 532 (745)
T ss_dssp HHT-TCCCCSEEEECCCBTTBGGGSHHHHHHTTGGGSCTTCEEES
T ss_pred ccC-CCCcccEEEEeccccccchhccHHHHHHHHHhCCCCcEEEC
Confidence 111 1478999997532 33455677777899999999764
No 282
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.73 E-value=1e-07 Score=93.13 Aligned_cols=176 Identities=10% Similarity=0.075 Sum_probs=108.3
Q ss_pred cCChHHHHHHHHHHHcc--CCCCCCCCHHHHHHHHHHHhh------cCCCEEEEEcCccCHHHHHHHHHCCC--CCEEEE
Q 023645 80 VREPEILRQLREETAGM--RGSQMQVSPDQAQLLAMLVQI------LGAQRCIEVGVYTGYSSLAIALVLPE--SGCLVA 149 (279)
Q Consensus 80 ~~~~~~l~~~~~~~~~~--~~~~~~~~~~~~~~l~~l~~~------~~~~~VLEiG~G~G~~t~~la~~~~~--~~~v~~ 149 (279)
...++....+.+..... ..+...+++....++..++.. .++.+|||.|||+|.+.+.+++.++. ..+++|
T Consensus 274 ~~~DdL~ell~eya~k~Rkk~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyG 353 (878)
T 3s1s_A 274 LTGDELAELIHDIATRGRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWA 353 (878)
T ss_dssp CSSHHHHHHHHHHHTTSCCCCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEE
T ss_pred CchHHHHHHHHHHHHHhCCcCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEE
Confidence 34455555555554322 234456778888888777321 24679999999999999999987741 357999
Q ss_pred EeCChhHHHHH--HHHHHHhCCCC---cEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccc-----------------
Q 023645 150 CERDARSLEVA--KKYYERAGVSH---KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM----------------- 207 (279)
Q Consensus 150 iD~s~~~~~~a--~~~~~~~g~~~---~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~----------------- 207 (279)
+|+++.+++.| +.++..+++.. ...+...|+.+..... ..+||+|+.+++...
T Consensus 354 vEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~-----~~kFDVVIgNPPYg~~~~~~~e~kd~~~r~~~ 428 (878)
T 3s1s_A 354 NDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPED-----FANVSVVVMNPPYVSGVTDPAIKRKFAHKIIQ 428 (878)
T ss_dssp ECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGG-----GTTEEEEEECCBCCSSCCCHHHHHHHHHHHHH
T ss_pred EECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccc-----cCCCCEEEECCCccccccchhhhhhHHHHhhh
Confidence 99999999999 55444322211 1355666665421111 468999999876310
Q ss_pred ---------------hHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEEE-Eee
Q 023645 208 ---------------YQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSIS-MVP 268 (279)
Q Consensus 208 ---------------~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~lp 268 (279)
+..+++.+.++|++||.+++ ++-.+-+... .. .-..+.++|.++..+..+ .+|
T Consensus 429 g~p~~p~s~~G~~DLy~aFIe~Al~lLKpGGrLAf--IlP~s~Lf~s---g~---~~kkLRk~LLe~~~I~aIIdLP 497 (878)
T 3s1s_A 429 LTGNRPQTLFGQIGVEALFLELVTELVQDGTVISA--IMPKQYLTAQ---GN---ESKAFREFLVGNFGLEHIFLYP 497 (878)
T ss_dssp HHSSCCSSCSSSCCHHHHHHHHHHHHSCTTCEEEE--EEETHHHHCC---SH---HHHHHHHHHTTTTCEEEEEECC
T ss_pred hccccccccccccchHHHHHHHHHHhcCCCcEEEE--EEChHHhccC---Ch---HHHHHHHHHHhCCCeEEEEECC
Confidence 23467778899999998876 2222222110 01 124455666667666543 344
No 283
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.68 E-value=7.3e-08 Score=82.84 Aligned_cols=104 Identities=12% Similarity=-0.095 Sum_probs=69.8
Q ss_pred CHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH
Q 023645 104 SPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 104 ~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (279)
++.....+...+...++.+|||||||+|..|. +.. .+ ..+|+++|+++++++.+++++... ++++++++|+.+.
T Consensus 6 d~~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~-~~-~~~v~avEid~~~~~~a~~~~~~~---~~v~~i~~D~~~~ 79 (252)
T 1qyr_A 6 DQFVIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG-ER-LDQLTVIELDRDLAARLQTHPFLG---PKLTIYQQDAMTF 79 (252)
T ss_dssp CHHHHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH-TT-CSCEEEECCCHHHHHHHHTCTTTG---GGEEEECSCGGGC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh-CC-CCeEEEEECCHHHHHHHHHHhccC---CceEEEECchhhC
Confidence 44444445555555667799999999999999 654 22 233999999999999999876532 3699999999874
Q ss_pred -HHHHHhCCCCCcEEEEEEeCCccchHHHHHHH
Q 023645 184 -LKALILNGEASSYDFAFVDAEKRMYQEYFELL 215 (279)
Q Consensus 184 -l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~ 215 (279)
++..... .+..|.|+.+.+..-....+..+
T Consensus 80 ~~~~~~~~--~~~~~~vvsNlPY~i~~~il~~l 110 (252)
T 1qyr_A 80 NFGELAEK--MGQPLRVFGNLPYNISTPLMFHL 110 (252)
T ss_dssp CHHHHHHH--HTSCEEEEEECCTTTHHHHHHHH
T ss_pred CHHHhhcc--cCCceEEEECCCCCccHHHHHHH
Confidence 3332100 02457888887754444444333
No 284
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.62 E-value=1.1e-08 Score=82.57 Aligned_cols=90 Identities=13% Similarity=0.121 Sum_probs=68.3
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++.+|||||||. +++|+++.+++.|++.... +++++++|+.+.... ...+++|
T Consensus 10 ~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~-----~~~~~~~d~~~~~~~---~~~~~~f 64 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN-----EGRVSVENIKQLLQS---AHKESSF 64 (176)
T ss_dssp CCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT-----TSEEEEEEGGGGGGG---CCCSSCE
T ss_pred CCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc-----CcEEEEechhcCccc---cCCCCCE
Confidence 34678999999985 2389999999999987532 389999999754210 0015789
Q ss_pred EEEEEeCC---c-cchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 197 DFAFVDAE---K-RMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 197 DlI~id~~---~-~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
|+|++... . .+....++++.++|||||.+++.+..
T Consensus 65 D~V~~~~~l~~~~~~~~~~l~~~~r~LkpgG~l~~~~~~ 103 (176)
T 2ld4_A 65 DIILSGLVPGSTTLHSAEILAEIARILRPGGCLFLKEPV 103 (176)
T ss_dssp EEEEECCSTTCCCCCCHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred eEEEECChhhhcccCHHHHHHHHHHHCCCCEEEEEEccc
Confidence 99998643 2 56688999999999999999996543
No 285
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.52 E-value=5.6e-07 Score=77.91 Aligned_cols=83 Identities=12% Similarity=0.079 Sum_probs=66.9
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
...++..+||.+||.|..|..+++. +++|+|+|.++.+++.|++ ++. ++++++++++.+....+...+ .++
T Consensus 19 ~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~----~rv~lv~~~f~~l~~~L~~~g-~~~ 89 (285)
T 1wg8_A 19 AVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL----PGLTVVQGNFRHLKRHLAALG-VER 89 (285)
T ss_dssp TCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC----TTEEEEESCGGGHHHHHHHTT-CSC
T ss_pred CCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc----CCEEEEECCcchHHHHHHHcC-CCC
Confidence 3456779999999999999999987 5899999999999999998 643 579999999987644343322 368
Q ss_pred EEEEEEeCCccc
Q 023645 196 YDFAFVDAEKRM 207 (279)
Q Consensus 196 fDlI~id~~~~~ 207 (279)
+|.|++|.+...
T Consensus 90 vDgIL~DLGvSS 101 (285)
T 1wg8_A 90 VDGILADLGVSS 101 (285)
T ss_dssp EEEEEEECSCCH
T ss_pred cCEEEeCCcccc
Confidence 999999977544
No 286
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=98.33 E-value=4.2e-07 Score=78.76 Aligned_cols=128 Identities=16% Similarity=0.192 Sum_probs=92.6
Q ss_pred HHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHH
Q 023645 109 QLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALI 188 (279)
Q Consensus 109 ~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~ 188 (279)
.++..+.. ..+..+||+-+|+|..++.+++. ..+++.+|.++...+..++|++. .++++++.+|+...+..+.
T Consensus 82 ~yf~~l~~-~n~~~~LDlfaGSGaLgiEaLS~---~d~~vfvE~~~~a~~~L~~Nl~~---~~~~~V~~~D~~~~L~~l~ 154 (283)
T 2oo3_A 82 EYISVIKQ-INLNSTLSYYPGSPYFAINQLRS---QDRLYLCELHPTEYNFLLKLPHF---NKKVYVNHTDGVSKLNALL 154 (283)
T ss_dssp HHHHHHHH-HSSSSSCCEEECHHHHHHHHSCT---TSEEEEECCSHHHHHHHTTSCCT---TSCEEEECSCHHHHHHHHC
T ss_pred HHHHHHHH-hcCCCceeEeCCcHHHHHHHcCC---CCeEEEEeCCHHHHHHHHHHhCc---CCcEEEEeCcHHHHHHHhc
Confidence 34444433 45667999999999999988773 46999999999999999998864 4579999999988877663
Q ss_pred hCCCCCcEEEEEEeCCcc---chHHHHHHHH--ccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHHhh
Q 023645 189 LNGEASSYDFAFVDAEKR---MYQEYFELLL--QLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKNLM 257 (279)
Q Consensus 189 ~~~~~~~fDlI~id~~~~---~~~~~l~~~~--~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~ 257 (279)
.. ..+||+||+|++.+ .+...++.+. ..+.++|++++ |-..+. ...++.|.+.+.
T Consensus 155 ~~--~~~fdLVfiDPPYe~k~~~~~vl~~L~~~~~r~~~Gi~v~----WYPi~~--------~~~~~~~~~~l~ 214 (283)
T 2oo3_A 155 PP--PEKRGLIFIDPSYERKEEYKEIPYAIKNAYSKFSTGLYCV----WYPVVN--------KAWTEQFLRKMR 214 (283)
T ss_dssp SC--TTSCEEEEECCCCCSTTHHHHHHHHHHHHHHHCTTSEEEE----EEEESS--------HHHHHHHHHHHH
T ss_pred CC--CCCccEEEECCCCCCCcHHHHHHHHHHHhCccCCCeEEEE----EEeccc--------hHHHHHHHHHHH
Confidence 32 24799999999854 4556665554 35678999887 543321 112456777664
No 287
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.25 E-value=6.3e-06 Score=64.20 Aligned_cols=85 Identities=15% Similarity=0.055 Sum_probs=59.0
Q ss_pred CCCEEEEEcCccC-HHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 119 GAQRCIEVGVYTG-YSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 119 ~~~~VLEiG~G~G-~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
++.+|||||||.| ..+..|++.. +..|+++|++|..++ +++.|.++....+ -+.||
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~----------------~v~dDiF~P~~~~-----Y~~~D 91 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG----------------IVRDDITSPRMEI-----YRGAA 91 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT----------------EECCCSSSCCHHH-----HTTEE
T ss_pred CCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc----------------eEEccCCCCcccc-----cCCcC
Confidence 4579999999999 5999998753 578999999998765 7888887643322 25899
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+|+.-.+.......+-.+.+ +-|.-+++.
T Consensus 92 LIYsirPP~El~~~i~~lA~--~v~adliI~ 120 (153)
T 2k4m_A 92 LIYSIRPPAEIHSSLMRVAD--AVGARLIIK 120 (153)
T ss_dssp EEEEESCCTTTHHHHHHHHH--HHTCEEEEE
T ss_pred EEEEcCCCHHHHHHHHHHHH--HcCCCEEEE
Confidence 99665554444444444443 234555553
No 288
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.24 E-value=6.8e-06 Score=72.78 Aligned_cols=85 Identities=24% Similarity=0.148 Sum_probs=67.6
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++..++|..||.|..|..+++.++++++|+|+|.++++++.|+ .+ ..++++++++++.+....+...+-.+++
T Consensus 55 i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL----~~~Rv~lv~~nF~~l~~~L~~~g~~~~v 129 (347)
T 3tka_A 55 IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI----DDPRFSIIHGPFSALGEYVAERDLIGKI 129 (347)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC----CCTTEEEEESCGGGHHHHHHHTTCTTCE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh----cCCcEEEEeCCHHHHHHHHHhcCCCCcc
Confidence 456789999999999999999999877899999999999999884 33 2468999999998765555433212479
Q ss_pred EEEEEeCCcc
Q 023645 197 DFAFVDAEKR 206 (279)
Q Consensus 197 DlI~id~~~~ 206 (279)
|.|+.|-+..
T Consensus 130 DgILfDLGVS 139 (347)
T 3tka_A 130 DGILLDLGVS 139 (347)
T ss_dssp EEEEEECSCC
T ss_pred cEEEECCccC
Confidence 9999987643
No 289
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.12 E-value=1.1e-05 Score=76.36 Aligned_cols=156 Identities=9% Similarity=0.119 Sum_probs=106.6
Q ss_pred CCCCCCCHHHHHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHHCCC------------CCEEEEEeCChhHHHHHHHHHH
Q 023645 98 GSQMQVSPDQAQLLAMLVQILGAQRCIEVGVYTGYSSLAIALVLPE------------SGCLVACERDARSLEVAKKYYE 165 (279)
Q Consensus 98 ~~~~~~~~~~~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~~~~------------~~~v~~iD~s~~~~~~a~~~~~ 165 (279)
.+..-+++....++..++....+.+|+|-.||+|.+.....+.+.. ...++|+|+++.....|+-++-
T Consensus 196 ~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~ 275 (530)
T 3ufb_A 196 SGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLL 275 (530)
T ss_dssp CCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHH
T ss_pred CceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHH
Confidence 3456678888899988888888889999999999998877665421 2469999999999999999988
Q ss_pred HhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCcc-------------------chHHHHHHHHccCC------
Q 023645 166 RAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-------------------MYQEYFELLLQLIR------ 220 (279)
Q Consensus 166 ~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~-------------------~~~~~l~~~~~~Lk------ 220 (279)
-+|... ..+.++|...... ...++..+||+|+.+++.. ....+++.+...|+
T Consensus 276 lhg~~~-~~I~~~dtL~~~~--~~~~~~~~fD~Il~NPPf~~~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~Lk~~~~~l 352 (530)
T 3ufb_A 276 LHGLEY-PRIDPENSLRFPL--REMGDKDRVDVILTNPPFGGEEEKGILGNFPEDMQTAETAMLFLQLIMRKLKRPGHGS 352 (530)
T ss_dssp HHTCSC-CEEECSCTTCSCG--GGCCGGGCBSEEEECCCSSCBCCHHHHTTSCGGGCCCBHHHHHHHHHHHHBCCTTSSS
T ss_pred hcCCcc-ccccccccccCch--hhhcccccceEEEecCCCCccccccccccCchhcccchhHHHHHHHHHHHhhhhhhcc
Confidence 888754 5788888764211 1111235799999987631 12346777777776
Q ss_pred -CCcEEEE---eCCCCCCcccCcccCChhhHHHHHHHHHhhhCCCeEE-EEee
Q 023645 221 -VGGIIVI---DNVLWHGKVADQMVNDAKTISIRNFNKNLMEDERVSI-SMVP 268 (279)
Q Consensus 221 -~gG~lv~---dd~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~lp 268 (279)
+||.+.+ +.+++.+. .. ..+.++|.++..+++ +.||
T Consensus 353 ~~gGr~avVlP~g~Lf~~~---------~~---~~iRk~Lle~~~l~aII~LP 393 (530)
T 3ufb_A 353 DNGGRAAVVVPNGTLFSDG---------IS---ARIKEELLKNFNLHTIVRLP 393 (530)
T ss_dssp SSCCEEEEEEEHHHHHCCT---------HH---HHHHHHHHHHSEEEEEEECC
T ss_pred CCCceEEEEecchhhhccc---------hH---HHHHHHHhhcCEEEEEEECC
Confidence 6887655 23343332 11 234455566666665 4466
No 290
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.02 E-value=5.7e-06 Score=71.18 Aligned_cols=105 Identities=14% Similarity=0.095 Sum_probs=63.7
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..+..+|||+|||+|.++..+++..+ ...++++|+.-+........ ...+. + +....+++ +.. .+ ..++|
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~-~~~v~g~dVGvDl~~~pi~~-~~~g~-~-ii~~~~~~-dv~-~l----~~~~~ 141 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKE-VSGVKGFTLGRDGHEKPMNV-QSLGW-N-IITFKDKT-DIH-RL----EPVKC 141 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTT-EEEEEEECCCCTTCCCCCCC-CBTTG-G-GEEEECSC-CTT-TS----CCCCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcC-CCcceeEEEeccCccccccc-CcCCC-C-eEEEeccc-eeh-hc----CCCCc
Confidence 34567999999999999999887643 35788888874431000000 00011 2 33345543 111 11 15789
Q ss_pred EEEEEeCCcc----ch-----HHHHHHHHccCCCC-cEEEEeCCCC
Q 023645 197 DFAFVDAEKR----MY-----QEYFELLLQLIRVG-GIIVIDNVLW 232 (279)
Q Consensus 197 DlI~id~~~~----~~-----~~~l~~~~~~Lk~g-G~lv~dd~~~ 232 (279)
|+|++|.... .. ...++.+.++|+|| |.+|+. ++-
T Consensus 142 DlVlsD~apnsG~~~~D~~rs~~LL~~a~~~LkpG~G~FV~K-Vf~ 186 (277)
T 3evf_A 142 DTLLCDIGESSSSSVTEGERTVRVLDTVEKWLACGVDNFCVK-VLA 186 (277)
T ss_dssp SEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE-ESC
T ss_pred cEEEecCccCcCchHHHHHHHHHHHHHHHHHhCCCCCeEEEE-ecC
Confidence 9999997432 11 12357778999999 999994 443
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=97.99 E-value=1.3e-05 Score=72.12 Aligned_cols=72 Identities=7% Similarity=0.028 Sum_probs=54.7
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..++++|||+||++|++|..+++. +++|++||+.+-.- .+. -..+|+++++|+....+. .++|
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l~~-----~l~---~~~~V~~~~~d~~~~~~~------~~~~ 271 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPMAQ-----SLM---DTGQVTWLREDGFKFRPT------RSNI 271 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCCCH-----HHH---TTTCEEEECSCTTTCCCC------SSCE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhcCh-----hhc---cCCCeEEEeCccccccCC------CCCc
Confidence 346889999999999999999886 57999999875221 111 124699999999765431 4689
Q ss_pred EEEEEeCCc
Q 023645 197 DFAFVDAEK 205 (279)
Q Consensus 197 DlI~id~~~ 205 (279)
|+|++|...
T Consensus 272 D~vvsDm~~ 280 (375)
T 4auk_A 272 SWMVCDMVE 280 (375)
T ss_dssp EEEEECCSS
T ss_pred CEEEEcCCC
Confidence 999999763
No 292
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.95 E-value=3e-06 Score=72.07 Aligned_cols=96 Identities=16% Similarity=0.155 Sum_probs=61.8
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHH--CCC-CCEEEEEeC--ChhHHHHHHHHHHHhCCCCcEEEEEc-ChhhHHHHHHhC
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALV--LPE-SGCLVACER--DARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILN 190 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~--~~~-~~~v~~iD~--s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~~~~~ 190 (279)
+.++.+|||+||+.|.|+.+.++. ... .+.++++|. .|-.. ...|+ +-++|+++ |+.+.
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~-------~~~Gv-~~i~~~~G~Df~~~------- 135 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLM-------QSYGW-NIVTMKSGVDVFYK------- 135 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCC-------CSTTG-GGEEEECSCCGGGS-------
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCcc-------cCCCc-eEEEeeccCCccCC-------
Confidence 346779999999999999999986 321 245566662 22100 00121 22466667 98762
Q ss_pred CCCCcEEEEEEeCCccc---------hHHHHHHHHccCCCCc-EEEEe
Q 023645 191 GEASSYDFAFVDAEKRM---------YQEYFELLLQLIRVGG-IIVID 228 (279)
Q Consensus 191 ~~~~~fDlI~id~~~~~---------~~~~l~~~~~~Lk~gG-~lv~d 228 (279)
+..++|+|++|..+.. ....++.+.++|+||| .+++.
T Consensus 136 -~~~~~DvVLSDMAPnSG~~~vD~~Rs~~aL~~A~~~Lk~gG~~FvvK 182 (269)
T 2px2_A 136 -PSEISDTLLCDIGESSPSAEIEEQRTLRILEMVSDWLSRGPKEFCIK 182 (269)
T ss_dssp -CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred -CCCCCCEEEeCCCCCCCccHHHHHHHHHHHHHHHHHhhcCCcEEEEE
Confidence 1458999999964211 1225677779999999 88884
No 293
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.92 E-value=4.7e-06 Score=71.81 Aligned_cols=146 Identities=16% Similarity=0.069 Sum_probs=82.1
Q ss_pred ChhHHHHHHhccCC--hHHHHHHHHHHHccCCCCCCCCHHHHHHHHHHH--hhcCCCEEEEEcCccCHHHHHHHHHCCCC
Q 023645 69 TPPLYDYILRNVRE--PEILRQLREETAGMRGSQMQVSPDQAQLLAMLV--QILGAQRCIEVGVYTGYSSLAIALVLPES 144 (279)
Q Consensus 69 ~~~l~~Y~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l~--~~~~~~~VLEiG~G~G~~t~~la~~~~~~ 144 (279)
..++.+|-...+.| ...-++..+..... .--.+...-+++...- .+.+..+|||||||.|.++..+++..+ .
T Consensus 39 k~~f~~y~~~~i~e~~r~~ar~~l~~~~~~---g~YrSRAAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~g-v 114 (282)
T 3gcz_A 39 KTQFEQYKRSCILEVDRTHARDSLENGIQN---GIAVSRGSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKN-V 114 (282)
T ss_dssp HHHHHHHHTTTCEEECCHHHHHHHHHTCCS---SBCSSTHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTT-E
T ss_pred HHHHHhhhhhceeeccHHHHHHHHhcCCcC---CCEecHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcC-C
Confidence 44666777766533 22333333333222 1123433333333322 235667999999999999999887554 4
Q ss_pred CEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc-ChhhHHHHHHhCCCCCcEEEEEEeCCcc----c-----hHHHHHH
Q 023645 145 GCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGEASSYDFAFVDAEKR----M-----YQEYFEL 214 (279)
Q Consensus 145 ~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~~~~~~~~~~fDlI~id~~~~----~-----~~~~l~~ 214 (279)
..|+++|+...+...+... ...+. +.+.+... |..+ + ...++|+|++|.... . ....++.
T Consensus 115 ~sV~GvdvG~d~~~~pi~~-~~~g~-~ii~~~~~~dv~~----l----~~~~~DvVLSDmApnsG~~~~D~~rs~~LL~~ 184 (282)
T 3gcz_A 115 KKVMAFTLGVQGHEKPIMR-TTLGW-NLIRFKDKTDVFN----M----EVIPGDTLLCDIGESSPSIAVEEQRTLRVLNC 184 (282)
T ss_dssp EEEEEECCCCTTSCCCCCC-CBTTG-GGEEEECSCCGGG----S----CCCCCSEEEECCCCCCSCHHHHHHHHHHHHHH
T ss_pred CeeeeEEeccCcccccccc-ccCCC-ceEEeeCCcchhh----c----CCCCcCEEEecCccCCCChHHHHHHHHHHHHH
Confidence 5789999976532211100 00111 22333322 3321 1 157899999996532 1 1234666
Q ss_pred HHccCCCC--cEEEEe
Q 023645 215 LLQLIRVG--GIIVID 228 (279)
Q Consensus 215 ~~~~Lk~g--G~lv~d 228 (279)
+..+|+|| |.+|+.
T Consensus 185 A~~~Lk~g~~G~Fv~K 200 (282)
T 3gcz_A 185 AKQWLQEGNYTEFCIK 200 (282)
T ss_dssp HHHHHHHHCCCEEEEE
T ss_pred HHHHcCCCCCCcEEEE
Confidence 77999999 999995
No 294
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.74 E-value=0.00023 Score=61.70 Aligned_cols=152 Identities=13% Similarity=0.072 Sum_probs=82.6
Q ss_pred cCCC-ChhHHHHHHhccCC--hHHHHHHHHHHHccCCCCCCCCHHH-HHHHHHHHhhcCCCEEEEEcCccCHHHHHHHHH
Q 023645 65 VISV-TPPLYDYILRNVRE--PEILRQLREETAGMRGSQMQVSPDQ-AQLLAMLVQILGAQRCIEVGVYTGYSSLAIALV 140 (279)
Q Consensus 65 ~~~~-~~~l~~Y~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~-~~~l~~l~~~~~~~~VLEiG~G~G~~t~~la~~ 140 (279)
...+ ..++.+|-...+.| ...-++..+......+....-+..+ .++... --..++++|||+||++|.|+..+++.
T Consensus 24 Ln~l~k~~f~~y~~~~i~e~dr~~ar~~l~~~~~~~g~yrSRaa~KL~ei~ek-~l~~~g~~vlDLGaaPGgWsqva~~~ 102 (300)
T 3eld_A 24 LNMLGKQEFERYKVSDITEVDRTAARRYLKEGRTDVGISVSRGAAKIRWLHER-GYLRITGRVLDLGCGRGGWSYYAAAQ 102 (300)
T ss_dssp HTTSCHHHHHHHHHTTCEEECCHHHHHHHHHTCSSSCCCSSTTHHHHHHHHHH-TSCCCCEEEEEETCTTCHHHHHHHTS
T ss_pred HHhhhHHHHHhhhhhccccccHHHHHHHHHcCCccCCCccchHHHHHHHHHHh-CCCCCCCEEEEcCCCCCHHHHHHHHh
Confidence 3344 45677888776533 2233333333322112222222222 222223 22345679999999999999999976
Q ss_pred CCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc-ChhhHHHHHHhCCCCCcEEEEEEeCCcc----c-----hHH
Q 023645 141 LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGEASSYDFAFVDAEKR----M-----YQE 210 (279)
Q Consensus 141 ~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~~~~~~~~~~fDlI~id~~~~----~-----~~~ 210 (279)
.+ ...|+++|+.......... ....+. +.+.+..+ |+.. + ..+++|+|++|.... . ...
T Consensus 103 ~g-v~sV~Gvdlg~~~~~~P~~-~~~~~~-~iv~~~~~~di~~----l----~~~~~DlVlsD~APnsG~~~~D~~rs~~ 171 (300)
T 3eld_A 103 KE-VMSVKGYTLGIEGHEKPIH-MQTLGW-NIVKFKDKSNVFT----M----PTEPSDTLLCDIGESSSNPLVERDRTMK 171 (300)
T ss_dssp TT-EEEEEEECCCCTTSCCCCC-CCBTTG-GGEEEECSCCTTT----S----CCCCCSEEEECCCCCCSSHHHHHHHHHH
T ss_pred cC-CceeeeEEecccccccccc-ccccCC-ceEEeecCceeee----c----CCCCcCEEeecCcCCCCCHHHHHHHHHH
Confidence 43 3578899997542100000 000011 12333322 2221 1 147899999996533 1 123
Q ss_pred HHHHHHccCCCC-cEEEEe
Q 023645 211 YFELLLQLIRVG-GIIVID 228 (279)
Q Consensus 211 ~l~~~~~~Lk~g-G~lv~d 228 (279)
.++.+..+|+|| |.+|+.
T Consensus 172 LL~~A~~~LkpG~G~FV~K 190 (300)
T 3eld_A 172 VLENFERWKHVNTENFCVK 190 (300)
T ss_dssp HHHHHHHHCCTTCCEEEEE
T ss_pred HHHHHHHHhcCCCCcEEEE
Confidence 466677999999 999996
No 295
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.72 E-value=0.00019 Score=60.26 Aligned_cols=99 Identities=14% Similarity=0.074 Sum_probs=68.4
Q ss_pred hcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc-ChhhHHHHHHhCCCCCc
Q 023645 117 ILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGEASS 195 (279)
Q Consensus 117 ~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~~~~~~~~~~ 195 (279)
+.+..+|||+||++|.++.+++...+ ..+|+++|+-..-.+. -..++..|++ .++|+.+ |+... + ..+
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g-~~~V~avdvG~~ghe~-P~~~~s~gwn-~v~fk~gvDv~~~-~-------~~~ 144 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKK-VTEVRGYTKGGPGHEE-PVPMSTYGWN-IVKLMSGKDVFYL-P-------PEK 144 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTT-EEEEEEECCCSTTSCC-CCCCCCTTTT-SEEEECSCCGGGC-C-------CCC
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcC-CCEEEEEecCCCCccC-cchhhhcCcC-ceEEEeccceeec-C-------Ccc
Confidence 45677999999999999998887654 3489999997643210 0011233444 5999999 87432 2 467
Q ss_pred EEEEEEeCCcc---------chHHHHHHHHccCCCCcEEEE
Q 023645 196 YDFAFVDAEKR---------MYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 196 fDlI~id~~~~---------~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+|.|++|.... .....++.+.++|++ |-+++
T Consensus 145 ~DtllcDIgeSs~~~~vE~~RtlrvLela~~wL~~-~~fc~ 184 (267)
T 3p8z_A 145 CDTLLCDIGESSPSPTVEESRTIRVLKMVEPWLKN-NQFCI 184 (267)
T ss_dssp CSEEEECCCCCCSCHHHHHHHHHHHHHHHGGGCSS-CEEEE
T ss_pred ccEEEEecCCCCCChhhhhhHHHHHHHHHHHhccc-CCEEE
Confidence 99999996521 123367777799998 67777
No 296
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.67 E-value=0.00022 Score=62.35 Aligned_cols=51 Identities=18% Similarity=0.090 Sum_probs=43.4
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH 171 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~ 171 (279)
.++..|||++||+|..++.+++. +.+++|+|+++++++.|+++++......
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~~~~ 284 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREVPGF 284 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHSTTC
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhcccc
Confidence 46789999999999999987764 4699999999999999999998764433
No 297
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=97.65 E-value=0.00023 Score=62.36 Aligned_cols=136 Identities=18% Similarity=0.146 Sum_probs=82.0
Q ss_pred CCEEEEEcCccCHHHHHHHH---HCCCCC--EEEEEeCCh--------h-HHHHHHHHHHHhCC--CC--cEEEEEcChh
Q 023645 120 AQRCIEVGVYTGYSSLAIAL---VLPESG--CLVACERDA--------R-SLEVAKKYYERAGV--SH--KVKIKHGLAA 181 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~---~~~~~~--~v~~iD~s~--------~-~~~~a~~~~~~~g~--~~--~v~~~~gd~~ 181 (279)
.-+|||+|-|+|...+.... ...+.. +++++|..+ + ..+..+..+..... .. .+++..||+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 34899999999997654332 122244 567777532 1 22233333332110 12 2567889998
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCC--c----cchHHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCChhhHHHHHHHHH
Q 023645 182 DSLKALILNGEASSYDFAFVDAE--K----RMYQEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDAKTISIRNFNKN 255 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~--~----~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~~~~~~~~~~~~ 255 (279)
+.++.+ +..+||+||.|+- . -...++|+.+.++++|||+++-- .-.| +.+.
T Consensus 177 ~~l~~l----~~~~~Da~flDgFsP~kNPeLWs~e~f~~l~~~~~pgg~laTY--taag-----------------~VRR 233 (308)
T 3vyw_A 177 KRIKEV----ENFKADAVFHDAFSPYKNPELWTLDFLSLIKERIDEKGYWVSY--SSSL-----------------SVRK 233 (308)
T ss_dssp HHGGGC----CSCCEEEEEECCSCTTTSGGGGSHHHHHHHHTTEEEEEEEEES--CCCH-----------------HHHH
T ss_pred HHHhhh----cccceeEEEeCCCCcccCcccCCHHHHHHHHHHhCCCcEEEEE--eCcH-----------------HHHH
Confidence 887765 1358999999973 1 13468999999999999999852 2222 2333
Q ss_pred hhhCCCeEEEEee-cC--CceEEEEE
Q 023645 256 LMEDERVSISMVP-IG--DGMTICQK 278 (279)
Q Consensus 256 l~~~~~~~~~~lp-~~--~G~~i~~~ 278 (279)
-...-+|++.-.| +| ..+++|.+
T Consensus 234 ~L~~aGF~V~k~~G~g~KReml~A~~ 259 (308)
T 3vyw_A 234 SLLTLGFKVGSSREIGRKRKGTVASL 259 (308)
T ss_dssp HHHHTTCEEEEEECC---CEEEEEES
T ss_pred HHHHCCCEEEecCCCCCCCceeEEec
Confidence 3355677777766 32 35555543
No 298
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.63 E-value=0.00019 Score=64.38 Aligned_cols=59 Identities=8% Similarity=-0.010 Sum_probs=49.6
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~ 183 (279)
...|||||.|.|.+|..|++... ..+|+++|+++..+...++.+ . .++++++++|+.++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~---~~~l~ii~~D~l~~ 117 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E---GSPLQILKRDPYDW 117 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T---TSSCEEECSCTTCH
T ss_pred CCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c---CCCEEEEECCccch
Confidence 47899999999999999998632 358999999999998888766 2 25799999999765
No 299
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.61 E-value=0.00012 Score=63.28 Aligned_cols=145 Identities=15% Similarity=0.129 Sum_probs=83.3
Q ss_pred hHHHHHHhccCC--hHHHHHHHHHHHccCCCCCCCCHHHHHHHHHH--HhhcCCCEEEEEcCccCHHHHHHHHHCCCCCE
Q 023645 71 PLYDYILRNVRE--PEILRQLREETAGMRGSQMQVSPDQAQLLAML--VQILGAQRCIEVGVYTGYSSLAIALVLPESGC 146 (279)
Q Consensus 71 ~l~~Y~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~l--~~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~ 146 (279)
+...|=.+.+.| ....++.........+. ..+....++.... -.+.+..+||||||++|.++.+++...+ ..+
T Consensus 44 ~F~~Yk~~gi~Evdr~~ar~~l~~g~~~~g~--y~SR~~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~g-v~~ 120 (321)
T 3lkz_A 44 EFTRYRKEAIIEVDRSAAKHARKEGNVTGGH--PVSRGTAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKR-VQE 120 (321)
T ss_dssp HHHHHTTTTCEEECCHHHHHHHHHTCCSSCC--CSSTHHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTT-EEE
T ss_pred HHHHHhhcCceeechHHHHHHHhcCcCcCCC--ccchHHHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcC-CCE
Confidence 445665555433 22333333333222222 2343333333322 2245667999999999999998887654 347
Q ss_pred EEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc-ChhhHHHHHHhCCCCCcEEEEEEeCCcc---------chHHHHHHHH
Q 023645 147 LVACERDARSLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGEASSYDFAFVDAEKR---------MYQEYFELLL 216 (279)
Q Consensus 147 v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~~~~~~~~~~fDlI~id~~~~---------~~~~~l~~~~ 216 (279)
|+|+|+-..-.+.- ..++..+.+ -|.++.+ |+... + ..++|+|++|.... .....|+.+.
T Consensus 121 V~avdvG~~~he~P-~~~~ql~w~-lV~~~~~~Dv~~l-~-------~~~~D~ivcDigeSs~~~~ve~~Rtl~vLel~~ 190 (321)
T 3lkz_A 121 VRGYTKGGPGHEEP-QLVQSYGWN-IVTMKSGVDVFYR-P-------SECCDTLLCDIGESSSSAEVEEHRTIRVLEMVE 190 (321)
T ss_dssp EEEECCCSTTSCCC-CCCCBTTGG-GEEEECSCCTTSS-C-------CCCCSEEEECCCCCCSCHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCCccCc-chhhhcCCc-ceEEEeccCHhhC-C-------CCCCCEEEEECccCCCChhhhhhHHHHHHHHHH
Confidence 99999976521000 000122222 3888888 76432 2 36799999996511 1233667777
Q ss_pred ccCCCC-cEEEEe
Q 023645 217 QLIRVG-GIIVID 228 (279)
Q Consensus 217 ~~Lk~g-G~lv~d 228 (279)
++|++| |-+++.
T Consensus 191 ~wL~~~~~~f~~K 203 (321)
T 3lkz_A 191 DWLHRGPREFCVK 203 (321)
T ss_dssp HHHTTCCCEEEEE
T ss_pred HHhccCCCcEEEE
Confidence 889998 888883
No 300
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=97.59 E-value=2.5e-05 Score=76.23 Aligned_cols=108 Identities=17% Similarity=0.154 Sum_probs=73.6
Q ss_pred CCEEEEEcCccCHHHHHHHHHC-------CC----CCEEEEEeCChhHHHHHHH--------------HHHHh-----C-
Q 023645 120 AQRCIEVGVYTGYSSLAIALVL-------PE----SGCLVACERDARSLEVAKK--------------YYERA-----G- 168 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~-------~~----~~~v~~iD~s~~~~~~a~~--------------~~~~~-----g- 168 (279)
.-+|+|+|.|+|+..+.+.+.+ |. ..+++++|..|-..+.+++ .++.. |
T Consensus 59 ~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 138 (689)
T 3pvc_A 59 SCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAGC 138 (689)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSEE
T ss_pred ceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCCc
Confidence 4589999999999988876653 11 1579999996644433333 22221 1
Q ss_pred ----CCC---cEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCccc------hHHHHHHHHccCCCCcEEEEe
Q 023645 169 ----VSH---KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKRM------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 169 ----~~~---~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~~------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
+.+ .+++..||+.+.++.+.... ...+|.+|+|+.... ..++|..+.+++++||.+.-.
T Consensus 139 ~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~-~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~ 210 (689)
T 3pvc_A 139 HRILLADGAITLDLWFGDVNTLLPTLDDSL-NNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTRPGGTFSTF 210 (689)
T ss_dssp EEEEETTTTEEEEEEESCHHHHGGGCCGGG-TTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEEEEEEEEES
T ss_pred eEEEecCCcEEEEEEccCHHHHHhhccccc-CCceeEEEECCCCCCCChhhhhHHHHHHHHHHhCCCCEEEec
Confidence 111 46789999998887652110 368999999975322 478899999999999998764
No 301
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=97.50 E-value=0.00022 Score=61.74 Aligned_cols=93 Identities=18% Similarity=0.232 Sum_probs=63.3
Q ss_pred CCCEEEEEcC------ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 119 GAQRCIEVGV------YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 119 ~~~~VLEiG~------G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
.+.+|||+|+ ..|.+ .+.+..|.++.|+++|+.+-.. ..+ .+++||..+...
T Consensus 109 ~gmrVLDLGA~s~kg~APGS~--VLr~~~p~g~~VVavDL~~~~s-----------da~--~~IqGD~~~~~~------- 166 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGTA--VLRQWLPTGTLLVDSDLNDFVS-----------DAD--STLIGDCATVHT------- 166 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHHH--HHHHHSCTTCEEEEEESSCCBC-----------SSS--EEEESCGGGEEE-------
T ss_pred CCCEEEeCCCCCCCCCCCcHH--HHHHhCCCCcEEEEeeCccccc-----------CCC--eEEEcccccccc-------
Confidence 4679999996 56763 4445566457999999987421 112 458999754211
Q ss_pred CCcEEEEEEeCCc--------c------chHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 193 ASSYDFAFVDAEK--------R------MYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 193 ~~~fDlI~id~~~--------~------~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
.++||+|++|... . -.+..++.+.+.|+|||.+++. ++.|.
T Consensus 167 ~~k~DLVISDMAPNtTG~~D~d~~Rs~~L~ElALdfA~~~LkpGGsFvVK--VFQGs 221 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHVTKENDSKEGFFTYLCGFIKQKLALGGSIAVK--ITEHS 221 (344)
T ss_dssp SSCEEEEEECCCCTTSCSSCSCCCCCCTHHHHHHHHHHHHEEEEEEEEEE--ECSSS
T ss_pred CCCCCEEEecCCCCcCCccccchhHHHHHHHHHHHHHHHhCcCCCEEEEE--EecCC
Confidence 4789999998531 0 1345667778999999999997 34443
No 302
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=97.12 E-value=0.0016 Score=63.17 Aligned_cols=108 Identities=19% Similarity=0.186 Sum_probs=71.7
Q ss_pred CEEEEEcCccCHHHHHHHHHC-------CC----CCEEEEEeC---ChhHHHH-----------HHHHHHHhCC------
Q 023645 121 QRCIEVGVYTGYSSLAIALVL-------PE----SGCLVACER---DARSLEV-----------AKKYYERAGV------ 169 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~-------~~----~~~v~~iD~---s~~~~~~-----------a~~~~~~~g~------ 169 (279)
-+|+|+|.|+|...+...+.+ |. .-+++++|. +++.+.. +++..+....
T Consensus 68 ~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 147 (676)
T 3ps9_A 68 FVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPGCH 147 (676)
T ss_dssp EEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSEEE
T ss_pred eEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCCce
Confidence 489999999999887766543 11 246999999 4444432 2232222211
Q ss_pred -------CCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCC------ccchHHHHHHHHccCCCCcEEEEeC
Q 023645 170 -------SHKVKIKHGLAADSLKALILNGEASSYDFAFVDAE------KRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 170 -------~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~------~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.-.+++..||+.+.++.+.... ...||++|.|+- .-...++|..+.++++|||.+....
T Consensus 148 ~~~~~~~~~~l~l~~gd~~~~l~~~~~~~-~~~~d~~~~D~f~p~~np~~w~~~~~~~l~~~~~~g~~~~t~~ 219 (676)
T 3ps9_A 148 RLLLDAGRVTLDLWFGDINELTSQLDDSL-NQKVDAWFLDGFAPAKNPDMWTQNLFNAMARLARPGGTLATFT 219 (676)
T ss_dssp EEEEGGGTEEEEEEESCHHHHGGGBCGGG-TTCEEEEEECCSCGGGCGGGSCHHHHHHHHHHEEEEEEEEESC
T ss_pred EEEecCCcEEEEEecCCHHHHHHhccccc-CCcccEEEECCCCCcCChhhhhHHHHHHHHHHhCCCCEEEecc
Confidence 0235678899988877652110 367999999974 1225678999999999999988643
No 303
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=97.12 E-value=0.0024 Score=57.65 Aligned_cols=37 Identities=11% Similarity=0.190 Sum_probs=26.7
Q ss_pred CCEEEEEcCccCHHHHHHHHH--------C------CCCCEEEEEeCChhH
Q 023645 120 AQRCIEVGVYTGYSSLAIALV--------L------PESGCLVACERDARS 156 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~--------~------~~~~~v~~iD~s~~~ 156 (279)
+.+|+|+||++|..|+.+... . ++..+|+.-|+-..-
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~ND 103 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSND 103 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSC
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccc
Confidence 468999999999999987331 1 235678888875544
No 304
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=97.10 E-value=0.00086 Score=60.72 Aligned_cols=78 Identities=8% Similarity=-0.009 Sum_probs=45.4
Q ss_pred CCEEEEEcCccCHHHHHHHHH-------------C---CCCCEEEEEeCC-----------hhHHHHHHHHHHHhCCCCc
Q 023645 120 AQRCIEVGVYTGYSSLAIALV-------------L---PESGCLVACERD-----------ARSLEVAKKYYERAGVSHK 172 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~-------------~---~~~~~v~~iD~s-----------~~~~~~a~~~~~~~g~~~~ 172 (279)
+.+|+|+||++|..|+.+... . ++..+|+.-|+. +.+.+.++ +..|...+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~---~~~g~~~~ 129 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLE---KENGRKIG 129 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHH---HHTCCCTT
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhh---hhccCCCC
Confidence 468999999999999988765 1 124578888876 33222221 12232112
Q ss_pred EEEEEcChhhHHHHHHhCCCCCcEEEEEEeC
Q 023645 173 VKIKHGLAADSLKALILNGEASSYDFAFVDA 203 (279)
Q Consensus 173 v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~ 203 (279)
..|+.|..-.+...+. .+++||+|+...
T Consensus 130 ~~f~~gvpgSFy~rlf---p~~S~d~v~Ss~ 157 (384)
T 2efj_A 130 SCLIGAMPGSFYSRLF---PEESMHFLHSCY 157 (384)
T ss_dssp SEEEEECCSCTTSCCS---CTTCEEEEEEES
T ss_pred ceEEEecchhhhhccC---CCCceEEEEecc
Confidence 3555554433222111 168999999864
No 305
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.00 E-value=0.0015 Score=55.89 Aligned_cols=48 Identities=8% Similarity=0.149 Sum_probs=40.6
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG 168 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g 168 (279)
.++..|||.+||+|..+....+. +-+++|+|+++..++.++++++.++
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC--
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhcc
Confidence 46779999999999998887764 4699999999999999999998654
No 306
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.91 E-value=0.0022 Score=58.58 Aligned_cols=60 Identities=12% Similarity=0.149 Sum_probs=47.8
Q ss_pred cCCCEEEEEcCccCHHHHHHH-HHCCCCCEEEEEeCChhHHHHHHHHHHH--hCCC-CcEEEEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIA-LVLPESGCLVACERDARSLEVAKKYYER--AGVS-HKVKIKH 177 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la-~~~~~~~~v~~iD~s~~~~~~a~~~~~~--~g~~-~~v~~~~ 177 (279)
.++..|+|||++.|..+..++ +..++.++|+++|++|...+..+++++. ++.. ++++++.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~ 288 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHG 288 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEE
Confidence 567899999999999999988 5555348999999999999999999987 2222 4455543
No 307
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=96.91 E-value=0.0033 Score=56.81 Aligned_cols=101 Identities=14% Similarity=0.032 Sum_probs=67.7
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHH-hC-CCCCcEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALI-LN-GEASSYDF 198 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~-~~-~~~~~fDl 198 (279)
.+++|+.||.|..++.+.++- -..+.++|+++.+.+..+.|+. ...++++|+.+...... .. .....+|+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~------~~~~~~~DI~~~~~~~~~~~~~~~~~~D~ 74 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFP------RSLHVQEDVSLLNAEIIKGFFKNDMPIDG 74 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCT------TSEEECCCGGGCCHHHHHHHHCSCCCCCE
T ss_pred CeEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCC------CCceEecChhhcCHHHHHhhcccCCCeeE
Confidence 489999999999999988762 1357799999999888777653 35778899876532211 00 01367999
Q ss_pred EEEeCCccc----------------hHHHHHHHHccCCCCcEEEEeCCC
Q 023645 199 AFVDAEKRM----------------YQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 199 I~id~~~~~----------------~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
|+.+.+... +..++ .+...++|. ++++.||-
T Consensus 75 i~ggpPCQ~fS~ag~~~~~d~r~~L~~~~~-~~v~~~~P~-~~v~ENV~ 121 (376)
T 3g7u_A 75 IIGGPPCQGFSSIGKGNPDDSRNQLYMHFY-RLVSELQPL-FFLAENVP 121 (376)
T ss_dssp EEECCCCCTTC-------CHHHHHHHHHHH-HHHHHHCCS-EEEEEECT
T ss_pred EEecCCCCCcccccCCCCCCchHHHHHHHH-HHHHHhCCC-EEEEecch
Confidence 998765111 12222 334566885 78888874
No 308
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=96.89 E-value=0.0039 Score=55.15 Aligned_cols=101 Identities=19% Similarity=0.233 Sum_probs=68.3
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
...++++||-+|+|. |..+..+++.. +.+|+++|.+++..+.+++ .|...-+.....+..+.+... .+
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~-----~g 231 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAM--GLRVAAVDIDDAKLNLARR----LGAEVAVNARDTDPAAWLQKE-----IG 231 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH-----HS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHH----cCCCEEEeCCCcCHHHHHHHh-----CC
Confidence 455778999999875 78888888876 4699999999988877654 454321111112333333322 24
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.+|.||..... ...++.+.+.|++||.++.-..
T Consensus 232 ~~d~vid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 264 (340)
T 3s2e_A 232 GAHGVLVTAVS---PKAFSQAIGMVRRGGTIALNGL 264 (340)
T ss_dssp SEEEEEESSCC---HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCEEEEeCCC---HHHHHHHHHHhccCCEEEEeCC
Confidence 79999866442 3567788899999999987543
No 309
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=96.88 E-value=0.0028 Score=56.79 Aligned_cols=103 Identities=20% Similarity=0.277 Sum_probs=67.0
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
...++++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|...-+.....+..+.+.... .+
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~~~~----~g 257 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAKQ----LGATHVINSKTQDPVAAIKEIT----DG 257 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHT----TS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHHH----cCCCEEecCCccCHHHHHHHhc----CC
Confidence 445678999999875 777778887763 2279999999988887754 3432111111123333333321 23
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.+|+||-.... ...++.+.+.|++||.+++-..
T Consensus 258 g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G~ 290 (371)
T 1f8f_A 258 GVNFALESTGS---PEILKQGVDALGILGKIAVVGA 290 (371)
T ss_dssp CEEEEEECSCC---HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCcEEEECCCC---HHHHHHHHHHHhcCCEEEEeCC
Confidence 79999865442 2457888999999999987543
No 310
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=96.86 E-value=0.0018 Score=52.51 Aligned_cols=101 Identities=15% Similarity=0.161 Sum_probs=61.2
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||.+|+ |.|..+..++... +++|+++|.+++..+.+++ .|....+.....+..+.+.... ..
T Consensus 35 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~---~~ 105 (198)
T 1pqw_A 35 RLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLSR----LGVEYVGDSRSVDFADEILELT---DG 105 (198)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHT----TCCSEEEETTCSTHHHHHHHHT---TT
T ss_pred CCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCCEEeeCCcHHHHHHHHHHh---CC
Confidence 3456789999994 4455555555544 4799999999887665543 3432111111112222222221 12
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+|+++..... ..++.+.+.|++||.++.-.
T Consensus 106 ~~~D~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 137 (198)
T 1pqw_A 106 YGVDVVLNSLAG----EAIQRGVQILAPGGRFIELG 137 (198)
T ss_dssp CCEEEEEECCCT----HHHHHHHHTEEEEEEEEECS
T ss_pred CCCeEEEECCch----HHHHHHHHHhccCCEEEEEc
Confidence 469999866542 46788889999999998743
No 311
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=96.86 E-value=0.0022 Score=57.19 Aligned_cols=76 Identities=13% Similarity=0.054 Sum_probs=55.3
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
+.+|+|+.||.|..++.+.++.-.-..+.++|+++.+++..+.|+.. ..++++|+.+....... ...+|+|
T Consensus 2 ~~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~------~~~~~~Di~~~~~~~~~---~~~~D~l 72 (343)
T 1g55_A 2 PLRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH------TQLLAKTIEGITLEEFD---RLSFDMI 72 (343)
T ss_dssp CEEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECSCGGGCCHHHHH---HHCCSEE
T ss_pred CCeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc------cccccCCHHHccHhHcC---cCCcCEE
Confidence 35899999999999999987621013699999999999988888742 34678888765432111 1268999
Q ss_pred EEeCC
Q 023645 200 FVDAE 204 (279)
Q Consensus 200 ~id~~ 204 (279)
+.+.+
T Consensus 73 ~~gpP 77 (343)
T 1g55_A 73 LMSPP 77 (343)
T ss_dssp EECCC
T ss_pred EEcCC
Confidence 98765
No 312
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=96.70 E-value=0.0043 Score=56.24 Aligned_cols=108 Identities=16% Similarity=0.290 Sum_probs=69.2
Q ss_pred HHhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh-hhHHHHHHhCC
Q 023645 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA-ADSLKALILNG 191 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~-~~~l~~~~~~~ 191 (279)
.+...++++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|. +-+.....+. .+.+....
T Consensus 180 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa-~~i~~~~~~~~~~~~~~~~--- 250 (398)
T 2dph_A 180 SAGVKPGSHVYIAGAGPVGRCAAAGARLLG-AACVIVGDQNPERLKLLSD----AGF-ETIDLRNSAPLRDQIDQIL--- 250 (398)
T ss_dssp HTTCCTTCEEEEECCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHHT----TTC-EEEETTSSSCHHHHHHHHH---
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCC-cEEcCCCcchHHHHHHHHh---
Confidence 34556788999999875 777888888764 2399999999988777653 343 1121112232 33333321
Q ss_pred CCCcEEEEEEeCCccc-----------hHHHHHHHHccCCCCcEEEEeCC
Q 023645 192 EASSYDFAFVDAEKRM-----------YQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 192 ~~~~fDlI~id~~~~~-----------~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+...+|+||-...... ....++.+.+.|++||.+++-..
T Consensus 251 ~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~ 300 (398)
T 2dph_A 251 GKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGI 300 (398)
T ss_dssp SSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSC
T ss_pred CCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEecc
Confidence 1237999986544321 13467888999999999986443
No 313
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=96.52 E-value=0.012 Score=52.26 Aligned_cols=102 Identities=14% Similarity=0.130 Sum_probs=66.5
Q ss_pred HhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC---hhhHHHHHHh
Q 023645 115 VQILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGL---AADSLKALIL 189 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd---~~~~l~~~~~ 189 (279)
....++.+||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|.. .++..+ ..+....+..
T Consensus 167 ~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~~~i~~ 237 (356)
T 1pl8_A 167 GGVTLGHKVLVCGAGPIGMVTLLVAKAMG--AAQVVVTDLSATRLSKAKE----IGAD---LVLQISKESPQEIARKVEG 237 (356)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEEESCHHHHHHHHH----TTCS---EEEECSSCCHHHHHHHHHH
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHH----hCCC---EEEcCcccccchHHHHHHH
Confidence 4456788999999874 777777888764 5 99999999988777654 4543 222222 1222222211
Q ss_pred CCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 190 NGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.. ...+|+||-.... ...++.+.+.|++||.++.-.
T Consensus 238 ~~-~~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G 273 (356)
T 1pl8_A 238 QL-GCKPEVTIECTGA---EASIQAGIYATRSGGTLVLVG 273 (356)
T ss_dssp HH-TSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECS
T ss_pred Hh-CCCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEEe
Confidence 11 2569999865443 245677889999999998744
No 314
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=96.50 E-value=0.00052 Score=61.62 Aligned_cols=108 Identities=10% Similarity=0.058 Sum_probs=65.1
Q ss_pred CCEEEEEcCccCHHHHHHHHH---------------CCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHH
Q 023645 120 AQRCIEVGVYTGYSSLAIALV---------------LPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 184 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~---------------~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l 184 (279)
+.+|+|+||++|..|+.+... -++..+|+..|+.......+-+.+.......+..|+.|..-.+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 347999999999988876554 13356899999877666555444332110012344444332211
Q ss_pred HHHHhCCCCCcEEEEEEeCCcc------------------------------------chHHHHHHHHccCCCCcEEEEe
Q 023645 185 KALILNGEASSYDFAFVDAEKR------------------------------------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 185 ~~~~~~~~~~~fDlI~id~~~~------------------------------------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
..+. .++++|+|+.....+ +...+|+.-.+.|+|||.+++.
T Consensus 132 ~rlf---p~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG~mvl~ 208 (359)
T 1m6e_X 132 GRLF---PRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGGRMVLT 208 (359)
T ss_dssp SCCS---CTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTCEEEEE
T ss_pred hccC---CCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCceEEEE
Confidence 1111 158999999764200 1233466668999999999986
Q ss_pred CC
Q 023645 229 NV 230 (279)
Q Consensus 229 d~ 230 (279)
-.
T Consensus 209 ~~ 210 (359)
T 1m6e_X 209 IL 210 (359)
T ss_dssp EE
T ss_pred Ee
Confidence 44
No 315
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=96.41 E-value=0.0092 Score=52.80 Aligned_cols=95 Identities=15% Similarity=0.134 Sum_probs=65.4
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
..+++|+.||.|..++.+.++- -..+.++|+++.+.+..+.++... . ++|+.+..... -..+|+|
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~aG--~~~v~~~e~d~~a~~t~~~N~~~~-----~---~~Di~~~~~~~-----~~~~D~l 75 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESCG--AECVYSNEWDKYAQEVYEMNFGEK-----P---EGDITQVNEKT-----IPDHDIL 75 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHTT--CEEEEEECCCHHHHHHHHHHHSCC-----C---BSCGGGSCGGG-----SCCCSEE
T ss_pred CCcEEEECCCcCHHHHHHHHCC--CeEEEEEeCCHHHHHHHHHHcCCC-----C---cCCHHHcCHhh-----CCCCCEE
Confidence 4689999999999999988752 236889999999999988887421 1 57877653322 2469999
Q ss_pred EEeCCc------------cc-----hHHHHHHHHccCCCCcEEEEeCCC
Q 023645 200 FVDAEK------------RM-----YQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 200 ~id~~~------------~~-----~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+.+.+. .+ +..+++ +...++|. ++++.||-
T Consensus 76 ~~gpPCQ~fS~ag~~~g~~d~r~~L~~~~~r-~i~~~~P~-~~~~ENV~ 122 (327)
T 2c7p_A 76 CAGFPCQAFSISGKQKGFEDSRGTLFFDIAR-IVREKKPK-VVFMENVK 122 (327)
T ss_dssp EEECCCTTTCTTSCCCGGGSTTSCHHHHHHH-HHHHHCCS-EEEEEEEG
T ss_pred EECCCCCCcchhcccCCCcchhhHHHHHHHH-HHHhccCc-EEEEeCcH
Confidence 987541 11 223333 34556885 88888874
No 316
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=96.32 E-value=0.0076 Score=54.06 Aligned_cols=108 Identities=19% Similarity=0.202 Sum_probs=68.0
Q ss_pred HHhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
.....++++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|...-+.....|..+.+.......
T Consensus 177 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~i~~~~~~~- 250 (370)
T 4ej6_A 177 LSGIKAGSTVAILGGGVIGLLTVQLARLAG-ATTVILSTRQATKRRLAEE----VGATATVDPSAGDVVEAIAGPVGLV- 250 (370)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSEEECTTSSCHHHHHHSTTSSS-
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCEEECCCCcCHHHHHHhhhhcc-
Confidence 34456788999999864 667777888764 2399999999988877765 3543211111223322222100011
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.+.+|+||-.... ...++.+.+.|++||.+++-..
T Consensus 251 ~gg~Dvvid~~G~---~~~~~~~~~~l~~~G~vv~~G~ 285 (370)
T 4ej6_A 251 PGGVDVVIECAGV---AETVKQSTRLAKAGGTVVILGV 285 (370)
T ss_dssp TTCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEECCCC---HHHHHHHHHHhccCCEEEEEec
Confidence 2489999865432 3467788899999999988544
No 317
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=96.32 E-value=0.02 Score=51.72 Aligned_cols=107 Identities=19% Similarity=0.204 Sum_probs=68.4
Q ss_pred HhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC-hhhHHHHHHhCCC
Q 023645 115 VQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL-AADSLKALILNGE 192 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd-~~~~l~~~~~~~~ 192 (279)
....++++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|.. -+.....+ ..+.+.... .
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~G-a~~Vi~~~~~~~~~~~a~~----lGa~-~i~~~~~~~~~~~v~~~t---~ 251 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLLG-AAVVIVGDLNPARLAHAKA----QGFE-IADLSLDTPLHEQIAALL---G 251 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCE-EEETTSSSCHHHHHHHHH---S
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC-CCeEEEEcCCHHHHHHHHH----cCCc-EEccCCcchHHHHHHHHh---C
Confidence 4556788999999865 777788888764 2389999999988877754 3541 11111112 223333321 1
Q ss_pred CCcEEEEEEeCCccc------------hHHHHHHHHccCCCCcEEEEeCC
Q 023645 193 ASSYDFAFVDAEKRM------------YQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 193 ~~~fDlI~id~~~~~------------~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
...+|+||-...... ....++.+.+.|++||.+++-..
T Consensus 252 g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 252 EPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp SSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred CCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 247999986544221 23467888999999999987544
No 318
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=96.28 E-value=0.0098 Score=52.32 Aligned_cols=98 Identities=17% Similarity=0.216 Sum_probs=63.3
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEE---cChhhHHHHHHhC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH---GLAADSLKALILN 190 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~---gd~~~~l~~~~~~ 190 (279)
...++++||-.|+ |.|..+..++... +++|+++|.+++..+.+++ .|.. ..+-. .+..+.+....
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~~~d~~~~~~~~~~~~~~~-- 211 (333)
T 1v3u_A 142 GVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYLKQ----IGFD--AAFNYKTVNSLEEALKKAS-- 211 (333)
T ss_dssp CCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCS--EEEETTSCSCHHHHHHHHC--
T ss_pred CCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCc--EEEecCCHHHHHHHHHHHh--
Confidence 3456789999997 4566666666654 4799999999887766633 3432 22211 22222333221
Q ss_pred CCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 191 GEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 191 ~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+.+|++|..... ..++.+.+.|++||.+++-.
T Consensus 212 --~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~g 244 (333)
T 1v3u_A 212 --PDGYDCYFDNVGG----EFLNTVLSQMKDFGKIAICG 244 (333)
T ss_dssp --TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred --CCCCeEEEECCCh----HHHHHHHHHHhcCCEEEEEe
Confidence 2579999876653 34778889999999998743
No 319
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=96.27 E-value=0.11 Score=45.36 Aligned_cols=110 Identities=12% Similarity=0.083 Sum_probs=73.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC--CCCcEEEEEcChhh-HHHHHHhCC-CCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--VSHKVKIKHGLAAD-SLKALILNG-EAS 194 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--~~~~v~~~~gd~~~-~l~~~~~~~-~~~ 194 (279)
....||+||||.=.-...+. .+.+.+++=+| .|+.++..++.+...+ ...+..++.+|..+ ++..+...+ +..
T Consensus 102 g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d~~~~~l~~~g~d~~ 178 (310)
T 2uyo_A 102 GIRQFVILASGLDSRAYRLD--WPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQDWPPALRSAGFDPS 178 (310)
T ss_dssp TCCEEEEETCTTCCHHHHSC--CCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTSCHHHHHHHTTCCTT
T ss_pred CCCeEEEeCCCCCchhhhcc--CCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHhhHHHHHHhccCCCC
Confidence 45689999997554433222 24357999999 5999999999997654 34568899999875 333333222 223
Q ss_pred cEEEEEEeCC-----ccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 195 SYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 195 ~fDlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
..=++++-+. .+.....++.+...+.||+.|+++-+.
T Consensus 179 ~Pt~~i~Egvl~Yl~~~~~~~ll~~l~~~~~~gs~l~~d~~~ 220 (310)
T 2uyo_A 179 ARTAWLAEGLLMYLPATAQDGLFTEIGGLSAVGSRIAVETSP 220 (310)
T ss_dssp SCEEEEECSCGGGSCHHHHHHHHHHHHHTCCTTCEEEEECCC
T ss_pred CCEEEEEechHhhCCHHHHHHHHHHHHHhCCCCeEEEEEecC
Confidence 3334444443 344567788888888999999998764
No 320
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=96.25 E-value=0.0096 Score=52.88 Aligned_cols=106 Identities=19% Similarity=0.211 Sum_probs=67.2
Q ss_pred HHhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
.....++++||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|...-+.....+..+.+... .+
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G-a~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~---t~ 232 (352)
T 3fpc_A 161 LANIKLGDTVCVIGIGPVGLMSVAGANHLG-AGRIFAVGSRKHCCDIALE----YGATDIINYKNGDIVEQILKA---TD 232 (352)
T ss_dssp HTTCCTTCCEEEECCSHHHHHHHHHHHTTT-CSSEEEECCCHHHHHHHHH----HTCCEEECGGGSCHHHHHHHH---TT
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC-CcEEEEECCCHHHHHHHHH----hCCceEEcCCCcCHHHHHHHH---cC
Confidence 34456788999999864 667777777653 2289999999988777765 344321111122333333322 11
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
...+|+||-..... ..++.+.+.|++||.++.-..
T Consensus 233 g~g~D~v~d~~g~~---~~~~~~~~~l~~~G~~v~~G~ 267 (352)
T 3fpc_A 233 GKGVDKVVIAGGDV---HTFAQAVKMIKPGSDIGNVNY 267 (352)
T ss_dssp TCCEEEEEECSSCT---THHHHHHHHEEEEEEEEECCC
T ss_pred CCCCCEEEECCCCh---HHHHHHHHHHhcCCEEEEecc
Confidence 34799998544332 356778899999999987544
No 321
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=96.24 E-value=0.016 Score=51.78 Aligned_cols=102 Identities=12% Similarity=0.149 Sum_probs=66.6
Q ss_pred HHhhcCCCEEEEEc--CccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCC
Q 023645 114 LVQILGAQRCIEVG--VYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG 191 (279)
Q Consensus 114 l~~~~~~~~VLEiG--~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~ 191 (279)
.....++++||-+| .|.|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+... .
T Consensus 158 ~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~---~ 228 (362)
T 2c0c_A 158 LGGLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCDRPINYKTEPVGTVLKQE---Y 228 (362)
T ss_dssp HTCCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH---C
T ss_pred hcCCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCcEEEecCChhHHHHHHHh---c
Confidence 34456788999999 45677778888776 4799999999888777654 343211111112222223222 1
Q ss_pred CCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 192 EASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 192 ~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
...+|+||-.... ..++.+.+.|+++|.++.-.
T Consensus 229 -~~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~g 261 (362)
T 2c0c_A 229 -PEGVDVVYESVGG----AMFDLAVDALATKGRLIVIG 261 (362)
T ss_dssp -TTCEEEEEECSCT----HHHHHHHHHEEEEEEEEECC
T ss_pred -CCCCCEEEECCCH----HHHHHHHHHHhcCCEEEEEe
Confidence 3579999866543 46778889999999988743
No 322
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=96.23 E-value=0.016 Score=51.29 Aligned_cols=103 Identities=20% Similarity=0.248 Sum_probs=68.3
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
...++.+||-+|+|. |..+..+++... +.+|+++|.+++..+.+++ .|...-+.. ..+..+.+..... ..
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~~----lGa~~~i~~-~~~~~~~v~~~t~---g~ 238 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALARE----VGADAAVKS-GAGAADAIRELTG---GQ 238 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-STTHHHHHHHHHG---GG
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHHH----cCCCEEEcC-CCcHHHHHHHHhC---CC
Confidence 456788999999864 677777887764 5799999999998877754 454321111 1223333333211 24
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.+|+||-.... ...++.+.+.|++||.++.-..
T Consensus 239 g~d~v~d~~G~---~~~~~~~~~~l~~~G~iv~~G~ 271 (345)
T 3jv7_A 239 GATAVFDFVGA---QSTIDTAQQVVAVDGHISVVGI 271 (345)
T ss_dssp CEEEEEESSCC---HHHHHHHHHHEEEEEEEEECSC
T ss_pred CCeEEEECCCC---HHHHHHHHHHHhcCCEEEEECC
Confidence 79999865443 2467788899999999987543
No 323
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=96.21 E-value=0.0095 Score=52.47 Aligned_cols=103 Identities=18% Similarity=0.141 Sum_probs=66.4
Q ss_pred HHhhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCC
Q 023645 114 LVQILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG 191 (279)
Q Consensus 114 l~~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~ 191 (279)
.....++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+.+ ..|...-+.....+..+.+....
T Consensus 144 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~~~--- 215 (336)
T 4b7c_A 144 VGQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLVE---ELGFDGAIDYKNEDLAAGLKREC--- 215 (336)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TTCCSEEEETTTSCHHHHHHHHC---
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCCEEEECCCHHHHHHHHHhc---
Confidence 344567889999998 4566777777765 4799999999987766632 23442111111122323333221
Q ss_pred CCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 192 EASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 192 ~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+.+|+||-.... ..++.+.+.|++||.++.-.
T Consensus 216 -~~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~G 248 (336)
T 4b7c_A 216 -PKGIDVFFDNVGG----EILDTVLTRIAFKARIVLCG 248 (336)
T ss_dssp -TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEECC
T ss_pred -CCCceEEEECCCc----chHHHHHHHHhhCCEEEEEe
Confidence 3579999876553 46788899999999998743
No 324
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=96.16 E-value=0.029 Score=49.69 Aligned_cols=106 Identities=17% Similarity=0.235 Sum_probs=66.1
Q ss_pred HhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEE-cChhhHHHHHHhCCC
Q 023645 115 VQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH-GLAADSLKALILNGE 192 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~-gd~~~~l~~~~~~~~ 192 (279)
....++++||-+|+|. |..+..+++.. +++|+++|.+++..+.+++ .|...-+.... .+..+.+.....+..
T Consensus 164 ~~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~i~~~~~~~~ 237 (352)
T 1e3j_A 164 AGVQLGTTVLVIGAGPIGLVSVLAAKAY--GAFVVCTARSPRRLEVAKN----CGADVTLVVDPAKEEESSIIERIRSAI 237 (352)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----TTCSEEEECCTTTSCHHHHHHHHHHHS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEcCCHHHHHHHHH----hCCCEEEcCcccccHHHHHHHHhcccc
Confidence 4456788999999864 66677778776 4689999999988877654 45432111111 233233322211000
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
...+|+||-.... ...++.+.+.|++||.++.-.
T Consensus 238 g~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~G 271 (352)
T 1e3j_A 238 GDLPNVTIDCSGN---EKCITIGINITRTGGTLMLVG 271 (352)
T ss_dssp SSCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECS
T ss_pred CCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEe
Confidence 1469999865443 235677889999999998743
No 325
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=96.15 E-value=0.054 Score=47.70 Aligned_cols=105 Identities=17% Similarity=0.118 Sum_probs=68.3
Q ss_pred HhhcCCCEEEEEcCccC-HHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 115 VQILGAQRCIEVGVYTG-YSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~G-~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
....++++||-+|+|.+ ..+..+++... +.+|+++|.+++..+.+++ .|-..-+.....|..+.+.... ..
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~~----~Ga~~~i~~~~~~~~~~v~~~t---~g 230 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAKK----IGADVTINSGDVNPVDEIKKIT---GG 230 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHHH----TTCSEEEEC-CCCHHHHHHHHT---TS
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhhh----cCCeEEEeCCCCCHHHHhhhhc---CC
Confidence 34557789999999764 45555565554 6799999999987766554 4443333444445544444332 13
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
..+|.++.+... ...+....+.|+++|.+++-..
T Consensus 231 ~g~d~~~~~~~~---~~~~~~~~~~l~~~G~~v~~g~ 264 (348)
T 4eez_A 231 LGVQSAIVCAVA---RIAFEQAVASLKPMGKMVAVAV 264 (348)
T ss_dssp SCEEEEEECCSC---HHHHHHHHHTEEEEEEEEECCC
T ss_pred CCceEEEEeccC---cchhheeheeecCCceEEEEec
Confidence 468888876543 2457788899999999987543
No 326
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=96.14 E-value=0.0083 Score=53.62 Aligned_cols=101 Identities=18% Similarity=0.114 Sum_probs=67.1
Q ss_pred HhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc---ChhhHHHHHHhC
Q 023645 115 VQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG---LAADSLKALILN 190 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g---d~~~~l~~~~~~ 190 (279)
....++++||-+|+|. |..+..+++.. +++|+++|.+++..+.+++ .|... ++.. +..+.+....
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~---vi~~~~~~~~~~v~~~~-- 253 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKAT--GAEVIVTSSSREKLDRAFA----LGADH---GINRLEEDWVERVYALT-- 253 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCSE---EEETTTSCHHHHHHHHH--
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEecCchhHHHHHH----cCCCE---EEcCCcccHHHHHHHHh--
Confidence 3445678999999774 66777778776 4799999999988877654 35432 2222 2223333321
Q ss_pred CCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCCC
Q 023645 191 GEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 191 ~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
+...+|+||-.... ..++.+.+.|++||.+++-...
T Consensus 254 -~g~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G~~ 289 (363)
T 3uog_A 254 -GDRGADHILEIAGG----AGLGQSLKAVAPDGRISVIGVL 289 (363)
T ss_dssp -TTCCEEEEEEETTS----SCHHHHHHHEEEEEEEEEECCC
T ss_pred -CCCCceEEEECCCh----HHHHHHHHHhhcCCEEEEEecC
Confidence 13479999876653 2366778899999999875443
No 327
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=96.13 E-value=0.024 Score=50.70 Aligned_cols=102 Identities=16% Similarity=0.193 Sum_probs=65.5
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEE--cChhhHHHHHHhCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH--GLAADSLKALILNG 191 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~--gd~~~~l~~~~~~~ 191 (279)
...++++||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|...-+.... .+..+.+....
T Consensus 189 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~~~~~~--- 259 (374)
T 1cdo_A 189 KVEPGSTCAVFGLGAVGLAAVMGCHSAG--AKRIIAVDLNPDKFEKAKV----FGATDFVNPNDHSEPISQVLSKMT--- 259 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHH----TTCCEEECGGGCSSCHHHHHHHHH---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEEcCCHHHHHHHHH----hCCceEEeccccchhHHHHHHHHh---
Confidence 445678999999764 666777787764 5 89999999998887754 35431111110 12222333221
Q ss_pred CCCcEEEEEEeCCccchHHHHHHHHccCCCC-cEEEEeCC
Q 023645 192 EASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNV 230 (279)
Q Consensus 192 ~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~g-G~lv~dd~ 230 (279)
.+.+|+||-.... ...++.+.+.|++| |.++.-..
T Consensus 260 -~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 295 (374)
T 1cdo_A 260 -NGGVDFSLECVGN---VGVMRNALESCLKGWGVSVLVGW 295 (374)
T ss_dssp -TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred -CCCCCEEEECCCC---HHHHHHHHHHhhcCCcEEEEEcC
Confidence 2479999865443 24577889999999 99987443
No 328
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.08 E-value=0.0034 Score=69.35 Aligned_cols=103 Identities=16% Similarity=0.133 Sum_probs=56.1
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCC----CCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPE----SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~----~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
+..+|||||.|+|..+..+...+.. ..+++..|+++...+.|++.++... ++...-|..+..+. ...
T Consensus 1240 ~~~~ilEigagtg~~t~~il~~l~~~~~~~~~yt~td~s~~~~~~a~~~f~~~d----i~~~~~d~~~~~~~-----~~~ 1310 (2512)
T 2vz8_A 1240 PKMKVVEVLAGDGQLYSRIPALLNTQPVMDLDYTATDRNPQALEAAQAKLEQLH----VTQGQWDPANPAPG-----SLG 1310 (2512)
T ss_dssp SEEEEEEESCSSSCCTTTHHHHTTTSSSCEEEEEEECSSSSSTTTTTTTHHHHT----EEEECCCSSCCCC---------
T ss_pred CCceEEEECCCccHHHHHHHHhhcccCcccceEEEecCChHHHHHHHHHhhhcc----cccccccccccccC-----CCC
Confidence 3569999999999988877776642 2378999999999888888876532 22211121110000 135
Q ss_pred cEEEEEEeCCc---cchHHHHHHHHccCCCCcEEEEeCC
Q 023645 195 SYDFAFVDAEK---RMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 195 ~fDlI~id~~~---~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.||+|+..... .+....+..+.++|||||.+++..+
T Consensus 1311 ~ydlvia~~vl~~t~~~~~~l~~~~~lL~p~G~l~~~e~ 1349 (2512)
T 2vz8_A 1311 KADLLVCNCALATLGDPAVAVGNMAATLKEGGFLLLHTL 1349 (2512)
T ss_dssp -CCEEEEECC--------------------CCEEEEEEC
T ss_pred ceeEEEEcccccccccHHHHHHHHHHhcCCCcEEEEEec
Confidence 79999976542 3455678889999999999998764
No 329
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=96.06 E-value=0.025 Score=50.65 Aligned_cols=102 Identities=15% Similarity=0.236 Sum_probs=65.5
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEE--cChhhHHHHHHhCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH--GLAADSLKALILNG 191 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~--gd~~~~l~~~~~~~ 191 (279)
...++++||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|...-+.... .+..+.+....
T Consensus 192 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~v~~~~--- 262 (376)
T 1e3i_A 192 KVTPGSTCAVFGLGCVGLSAIIGCKIAG--ASRIIAIDINGEKFPKAKA----LGATDCLNPRELDKPVQDVITELT--- 262 (376)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHH---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHH----hCCcEEEccccccchHHHHHHHHh---
Confidence 345678999999763 666777787764 5 89999999998877754 45431111110 12333333321
Q ss_pred CCCcEEEEEEeCCccchHHHHHHHHccCCCC-cEEEEeCC
Q 023645 192 EASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNV 230 (279)
Q Consensus 192 ~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~g-G~lv~dd~ 230 (279)
.+.+|+||-.... ...++.+.+.|++| |.+++-..
T Consensus 263 -~~g~Dvvid~~G~---~~~~~~~~~~l~~~~G~iv~~G~ 298 (376)
T 1e3i_A 263 -AGGVDYSLDCAGT---AQTLKAAVDCTVLGWGSCTVVGA 298 (376)
T ss_dssp -TSCBSEEEESSCC---HHHHHHHHHTBCTTTCEEEECCC
T ss_pred -CCCccEEEECCCC---HHHHHHHHHHhhcCCCEEEEECC
Confidence 2479999865432 34577889999999 99987443
No 330
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=96.05 E-value=0.0084 Score=52.99 Aligned_cols=103 Identities=13% Similarity=0.061 Sum_probs=65.2
Q ss_pred HhhcCCCEEEEEcCc--cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 115 VQILGAQRCIEVGVY--TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G--~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
+...++++||-+|+| .|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+... ..
T Consensus 140 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lga~~~~~~~~~~~~~~~~~~---~~ 210 (340)
T 3gms_A 140 LNLQRNDVLLVNACGSAIGHLFAQLSQIL--NFRLIAVTRNNKHTEELLR----LGAAYVIDTSTAPLYETVMEL---TN 210 (340)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCSEEEETTTSCHHHHHHHH---TT
T ss_pred cccCCCCEEEEeCCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----CCCcEEEeCCcccHHHHHHHH---hC
Confidence 345577899999986 566777777765 4799999999998887765 343321111112222222222 11
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
...+|+||-...... .....+.|++||.++.-..
T Consensus 211 ~~g~Dvvid~~g~~~----~~~~~~~l~~~G~iv~~G~ 244 (340)
T 3gms_A 211 GIGADAAIDSIGGPD----GNELAFSLRPNGHFLTIGL 244 (340)
T ss_dssp TSCEEEEEESSCHHH----HHHHHHTEEEEEEEEECCC
T ss_pred CCCCcEEEECCCChh----HHHHHHHhcCCCEEEEEee
Confidence 347999987655332 2334589999999998544
No 331
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=96.04 E-value=0.0098 Score=52.37 Aligned_cols=101 Identities=14% Similarity=0.164 Sum_probs=64.6
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+... ...
T Consensus 145 ~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~~~~~~~~~~~~~~~~~---~~~ 215 (334)
T 3qwb_A 145 HVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAKE----YGAEYLINASKEDILRQVLKF---TNG 215 (334)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTTSCHHHHHHHH---TTT
T ss_pred cCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcEEEeCCCchHHHHHHHH---hCC
Confidence 3456789999994 4566677777765 4799999999988776654 343211111112222222222 113
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+|+||-.... ..++.+.+.|++||.++.-.
T Consensus 216 ~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~G 247 (334)
T 3qwb_A 216 KGVDASFDSVGK----DTFEISLAALKRKGVFVSFG 247 (334)
T ss_dssp SCEEEEEECCGG----GGHHHHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCh----HHHHHHHHHhccCCEEEEEc
Confidence 579999866553 35677888999999998743
No 332
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=96.04 E-value=0.02 Score=51.18 Aligned_cols=101 Identities=16% Similarity=0.187 Sum_probs=64.9
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEE--cChhhHHHHHHhCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH--GLAADSLKALILNG 191 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~--gd~~~~l~~~~~~~ 191 (279)
...++++||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|...-+.... .+..+.+....
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~i~~~t--- 258 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAG--ASRIIGVGTHKDKFPKAIE----LGATECLNPKDYDKPIYEVICEKT--- 258 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHT---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEECCCHHHHHHHHH----cCCcEEEecccccchHHHHHHHHh---
Confidence 445678999999863 666777777653 5 89999999998877754 45431111110 12223333221
Q ss_pred CCCcEEEEEEeCCccchHHHHHHHHccCCCC-cEEEEeC
Q 023645 192 EASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDN 229 (279)
Q Consensus 192 ~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~g-G~lv~dd 229 (279)
.+.+|+||-.... ...++.+.+.|+++ |.++.-.
T Consensus 259 -~gg~Dvvid~~g~---~~~~~~~~~~l~~~~G~iv~~G 293 (373)
T 1p0f_A 259 -NGGVDYAVECAGR---IETMMNALQSTYCGSGVTVVLG 293 (373)
T ss_dssp -TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECC
T ss_pred -CCCCCEEEECCCC---HHHHHHHHHHHhcCCCEEEEEc
Confidence 2479999865432 24577888999999 9998744
No 333
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=96.00 E-value=0.022 Score=51.65 Aligned_cols=106 Identities=11% Similarity=0.124 Sum_probs=63.3
Q ss_pred hcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 117 ILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 117 ~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
..++.+||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|...-+.....+..+.+.... ....
T Consensus 211 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~i~~~t---~g~g 282 (404)
T 3ip1_A 211 IRPGDNVVILGGGPIGLAAVAILKHAG-ASKVILSEPSEVRRNLAKE----LGADHVIDPTKENFVEAVLDYT---NGLG 282 (404)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHTT-CSEEEEECSCHHHHHHHHH----HTCSEEECTTTSCHHHHHHHHT---TTCC
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEECCCHHHHHHHHH----cCCCEEEcCCCCCHHHHHHHHh---CCCC
Confidence 45678999999863 666677777764 2399999999988887765 3432111111123333333321 1347
Q ss_pred EEEEEEeCCcc--chHHHHHHHHccCCCCcEEEEeCC
Q 023645 196 YDFAFVDAEKR--MYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 196 fDlI~id~~~~--~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
+|+||-..... .....++.+++.+++||.+++-..
T Consensus 283 ~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~ 319 (404)
T 3ip1_A 283 AKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVAR 319 (404)
T ss_dssp CSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSC
T ss_pred CCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCC
Confidence 99998655433 222333333455599999998543
No 334
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=95.98 E-value=0.016 Score=51.26 Aligned_cols=100 Identities=13% Similarity=0.183 Sum_probs=65.0
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|...-+... .+..+.+.... ..
T Consensus 156 ~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~v~~~~-~~~~~~v~~~~---~~ 225 (342)
T 4eye_A 156 QLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKS----VGADIVLPLE-EGWAKAVREAT---GG 225 (342)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCSEEEESS-TTHHHHHHHHT---TT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcEEecCc-hhHHHHHHHHh---CC
Confidence 3456789999996 4577777788776 4799999999988877765 3433211111 23333333221 13
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+|+||-..... .++.+.+.|++||.++.-.
T Consensus 226 ~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~G 257 (342)
T 4eye_A 226 AGVDMVVDPIGGP----AFDDAVRTLASEGRLLVVG 257 (342)
T ss_dssp SCEEEEEESCC------CHHHHHHTEEEEEEEEEC-
T ss_pred CCceEEEECCchh----HHHHHHHhhcCCCEEEEEE
Confidence 4799998765542 4677889999999998743
No 335
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=95.95 E-value=0.05 Score=48.36 Aligned_cols=106 Identities=17% Similarity=0.151 Sum_probs=68.3
Q ss_pred HHhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCE-EEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc--ChhhHHHHHHh
Q 023645 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESGC-LVACERDARSLEVAKKYYERAGVSHKVKIKHG--LAADSLKALIL 189 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~-v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g--d~~~~l~~~~~ 189 (279)
.....++++||-+|+|. |..+..+++..+ ++ |+++|.+++..+.+++. . ..-+.+... +..+....+.+
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~G--a~~Vi~~~~~~~~~~~a~~l-~----~~~~~~~~~~~~~~~~~~~v~~ 246 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAAG--ACPLVITDIDEGRLKFAKEI-C----PEVVTHKVERLSAEESAKKIVE 246 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHTT--CCSEEEEESCHHHHHHHHHH-C----TTCEEEECCSCCHHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CCEEEEECCCHHHHHHHHHh-c----hhcccccccccchHHHHHHHHH
Confidence 34456778999999864 667777888764 55 99999999999888875 2 112333311 11222222222
Q ss_pred CCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 190 NGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+...+|+||-.... ...++.+.+.|++||.++.-.
T Consensus 247 ~t~g~g~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~G 283 (363)
T 3m6i_A 247 SFGGIEPAVALECTGV---ESSIAAAIWAVKFGGKVFVIG 283 (363)
T ss_dssp HTSSCCCSEEEECSCC---HHHHHHHHHHSCTTCEEEECC
T ss_pred HhCCCCCCEEEECCCC---hHHHHHHHHHhcCCCEEEEEc
Confidence 1123579999865442 245778889999999999744
No 336
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=95.94 E-value=0.017 Score=50.72 Aligned_cols=101 Identities=14% Similarity=0.174 Sum_probs=63.9
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+.... ..
T Consensus 142 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~i~~~~---~~ 212 (333)
T 1wly_A 142 KVKPGDYVLIHAAAGGMGHIMVPWARHL--GATVIGTVSTEEKAETARK----LGCHHTINYSTQDFAEVVREIT---GG 212 (333)
T ss_dssp CCCTTCEEEETTTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH---TT
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCCHHHHHHHHHHh---CC
Confidence 3456789999995 5666777777765 4799999999987777654 2432111111112222222221 12
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+|++|..... ..++.+.+.|++||.++.-.
T Consensus 213 ~~~d~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 244 (333)
T 1wly_A 213 KGVDVVYDSIGK----DTLQKSLDCLRPRGMCAAYG 244 (333)
T ss_dssp CCEEEEEECSCT----TTHHHHHHTEEEEEEEEECC
T ss_pred CCCeEEEECCcH----HHHHHHHHhhccCCEEEEEe
Confidence 479999876554 34678889999999988743
No 337
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=95.93 E-value=0.012 Score=51.75 Aligned_cols=101 Identities=14% Similarity=0.114 Sum_probs=64.8
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+... .+.
T Consensus 137 ~~~~g~~VlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~~~~~---~~~ 207 (325)
T 3jyn_A 137 QVKPGEIILFHAAAGGVGSLACQWAKAL--GAKLIGTVSSPEKAAHAKA----LGAWETIDYSHEDVAKRVLEL---TDG 207 (325)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHH---TTT
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEeCCCccHHHHHHHH---hCC
Confidence 3456789999983 4566777777765 4799999999988877764 343211111112222222222 113
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+|+||-.... ..++.+.+.|++||.++.-.
T Consensus 208 ~g~Dvvid~~g~----~~~~~~~~~l~~~G~iv~~g 239 (325)
T 3jyn_A 208 KKCPVVYDGVGQ----DTWLTSLDSVAPRGLVVSFG 239 (325)
T ss_dssp CCEEEEEESSCG----GGHHHHHTTEEEEEEEEECC
T ss_pred CCceEEEECCCh----HHHHHHHHHhcCCCEEEEEe
Confidence 579999876554 34677889999999998854
No 338
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=95.93 E-value=0.12 Score=45.64 Aligned_cols=110 Identities=11% Similarity=0.119 Sum_probs=74.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC--------------------CCCcEEEEE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG--------------------VSHKVKIKH 177 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g--------------------~~~~v~~~~ 177 (279)
.+...|+.+|||.......+....+ +.+++-||. |+.++.-++.+...+ ..++..++.
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~-~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~ 173 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFP-HLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAA 173 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCT-TEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEE
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCC-CCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEe
Confidence 4567999999999998888887544 567888888 888888777776642 135789999
Q ss_pred cChhhH--HHHHHhC-CCCCcEEEEEEeCC-----ccchHHHHHHHHccCCCCcEEE-EeCC
Q 023645 178 GLAADS--LKALILN-GEASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIV-IDNV 230 (279)
Q Consensus 178 gd~~~~--l~~~~~~-~~~~~fDlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv-~dd~ 230 (279)
+|..+. +..+... ++.+...+++.-+. .+.....++.+.... |+|.++ ++-+
T Consensus 174 ~DL~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~-~~~~~v~~e~i 234 (334)
T 1rjd_A 174 CDLNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKF-SHGLWISYDPI 234 (334)
T ss_dssp CCTTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHC-SSEEEEEEEEC
T ss_pred cCCCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhC-CCcEEEEEecc
Confidence 999763 3333222 22355677777664 445666777777766 566654 5543
No 339
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.92 E-value=0.077 Score=47.40 Aligned_cols=97 Identities=20% Similarity=0.262 Sum_probs=64.8
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
...++.+||-+|+|. |..+..+++.. +++|++++.+++..+.+++ .|.. .++.-.-.+....+ ..
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~---~vi~~~~~~~~~~~-----~~ 256 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGAD---EVVNSRNADEMAAH-----LK 256 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCS---EEEETTCHHHHHTT-----TT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCc---EEeccccHHHHHHh-----hc
Confidence 455778999999874 66777788776 4789999999998887765 3432 22222212222222 25
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+|+||-...... .++.+.+.|+++|.++.-.
T Consensus 257 g~Dvvid~~g~~~---~~~~~~~~l~~~G~iv~~G 288 (369)
T 1uuf_A 257 SFDFILNTVAAPH---NLDDFTTLLKRDGTMTLVG 288 (369)
T ss_dssp CEEEEEECCSSCC---CHHHHHTTEEEEEEEEECC
T ss_pred CCCEEEECCCCHH---HHHHHHHHhccCCEEEEec
Confidence 7999986554322 3567789999999988743
No 340
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=95.90 E-value=0.03 Score=50.09 Aligned_cols=102 Identities=17% Similarity=0.235 Sum_probs=65.0
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEE--cChhhHHHHHHhCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH--GLAADSLKALILNG 191 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~--gd~~~~l~~~~~~~ 191 (279)
...++++||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|...-+.... .+..+.+....
T Consensus 188 ~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~~~~~~--- 258 (374)
T 2jhf_A 188 KVTQGSTCAVFGLGGVGLSVIMGCKAAG--AARIIGVDINKDKFAKAKE----VGATECVNPQDYKKPIQEVLTEMS--- 258 (374)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHTT--CSEEEEECSCGGGHHHHHH----TTCSEEECGGGCSSCHHHHHHHHT---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHH----hCCceEecccccchhHHHHHHHHh---
Confidence 445678999999764 666777777763 5 89999999998877754 34421111110 12222333221
Q ss_pred CCCcEEEEEEeCCccchHHHHHHHHccCCCC-cEEEEeCC
Q 023645 192 EASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNV 230 (279)
Q Consensus 192 ~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~g-G~lv~dd~ 230 (279)
.+.+|+||-.... ...++.+.+.|++| |.++.-..
T Consensus 259 -~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 294 (374)
T 2jhf_A 259 -NGGVDFSFEVIGR---LDTMVTALSCCQEAYGVSVIVGV 294 (374)
T ss_dssp -TSCBSEEEECSCC---HHHHHHHHHHBCTTTCEEEECSC
T ss_pred -CCCCcEEEECCCC---HHHHHHHHHHhhcCCcEEEEecc
Confidence 2479999865442 24577888999999 99987443
No 341
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=95.90 E-value=0.061 Score=47.29 Aligned_cols=108 Identities=18% Similarity=0.153 Sum_probs=69.1
Q ss_pred HHhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 114 LVQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 114 l~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
.....++++||-+|+|. |..+..+++... ...++++|.+++..+.+++ .|...-+.....+..+....+..
T Consensus 155 ~~~~~~g~~VlV~GaG~vG~~aiq~ak~~G-~~~vi~~~~~~~k~~~a~~----lGa~~~i~~~~~~~~~~~~~~~~--- 226 (346)
T 4a2c_A 155 LAQGCENKNVIIIGAGTIGLLAIQCAVALG-AKSVTAIDISSEKLALAKS----FGAMQTFNSSEMSAPQMQSVLRE--- 226 (346)
T ss_dssp HTTCCTTSEEEEECCSHHHHHHHHHHHHTT-CSEEEEEESCHHHHHHHHH----TTCSEEEETTTSCHHHHHHHHGG---
T ss_pred HhccCCCCEEEEECCCCcchHHHHHHHHcC-CcEEEEEechHHHHHHHHH----cCCeEEEeCCCCCHHHHHHhhcc---
Confidence 33456778999999864 446666777764 4578999999988777654 45443222222333333333321
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCCCC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
...+|+|+..... ...++.+.++|++||.+++-....
T Consensus 227 ~~g~d~v~d~~G~---~~~~~~~~~~l~~~G~~v~~g~~~ 263 (346)
T 4a2c_A 227 LRFNQLILETAGV---PQTVELAVEIAGPHAQLALVGTLH 263 (346)
T ss_dssp GCSSEEEEECSCS---HHHHHHHHHHCCTTCEEEECCCCS
T ss_pred cCCcccccccccc---cchhhhhhheecCCeEEEEEeccC
Confidence 3567888765432 345778889999999999865543
No 342
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=95.85 E-value=0.042 Score=48.54 Aligned_cols=102 Identities=9% Similarity=0.058 Sum_probs=64.7
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEE-EcChhhHHHHHHhCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK-HGLAADSLKALILNGE 192 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~-~gd~~~~l~~~~~~~~ 192 (279)
...++++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .|...-+.+. ..+..+.+....
T Consensus 166 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~~----~g~~~~~d~~~~~~~~~~~~~~~---- 235 (347)
T 2hcy_A 166 NLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFRS----IGGEVFIDFTKEKDIVGAVLKAT---- 235 (347)
T ss_dssp TCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHHH----TTCCEEEETTTCSCHHHHHHHHH----
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHHH----cCCceEEecCccHhHHHHHHHHh----
Confidence 3456789999998 4566666677665 4799999999887766654 3432111111 112222333221
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.+.+|+||..... ...++.+.+.|++||.++.-..
T Consensus 236 ~~~~D~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g~ 270 (347)
T 2hcy_A 236 DGGAHGVINVSVS---EAAIEASTRYVRANGTTVLVGM 270 (347)
T ss_dssp TSCEEEEEECSSC---HHHHHHHTTSEEEEEEEEECCC
T ss_pred CCCCCEEEECCCc---HHHHHHHHHHHhcCCEEEEEeC
Confidence 2379999876543 2467888999999999987443
No 343
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=95.80 E-value=0.04 Score=48.55 Aligned_cols=100 Identities=23% Similarity=0.186 Sum_probs=64.5
Q ss_pred hhcCCCEEEEEcCc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 116 QILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 116 ~~~~~~~VLEiG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
...++++||-+|+| .|..+..+++.. +.+|++++.+++..+.+++ .|...-+.....+..+.+... .+
T Consensus 161 ~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~d~~~~~~~~~~~~~-----~~ 229 (339)
T 1rjw_A 161 GAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAKE----LGADLVVNPLKEDAAKFMKEK-----VG 229 (339)
T ss_dssp TCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTCSEEECTTTSCHHHHHHHH-----HS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----CCCCEEecCCCccHHHHHHHH-----hC
Confidence 45567899999985 366677777765 4799999999988877654 344211111111222222222 14
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+|+||..... ...++.+.+.|++||.++.-.
T Consensus 230 ~~d~vid~~g~---~~~~~~~~~~l~~~G~~v~~g 261 (339)
T 1rjw_A 230 GVHAAVVTAVS---KPAFQSAYNSIRRGGACVLVG 261 (339)
T ss_dssp SEEEEEESSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCEEEECCCC---HHHHHHHHHHhhcCCEEEEec
Confidence 69999865543 245778889999999988743
No 344
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=95.78 E-value=0.032 Score=49.86 Aligned_cols=102 Identities=15% Similarity=0.229 Sum_probs=65.0
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEE--cChhhHHHHHHhCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH--GLAADSLKALILNG 191 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~--gd~~~~l~~~~~~~ 191 (279)
...++++||-+|+|. |..+..+++..+ + +|+++|.+++..+.+++ .|...-+.... .+..+.+....
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~G--a~~Vi~~~~~~~~~~~~~~----lGa~~vi~~~~~~~~~~~~v~~~~--- 257 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAG--ASRIIGVDINKDKFARAKE----FGATECINPQDFSKPIQEVLIEMT--- 257 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHT--CSEEEEECSCGGGHHHHHH----HTCSEEECGGGCSSCHHHHHHHHT---
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC--CCeEEEEcCCHHHHHHHHH----cCCceEeccccccccHHHHHHHHh---
Confidence 345678999999764 566677777653 5 89999999998887764 34431111100 12222333221
Q ss_pred CCCcEEEEEEeCCccchHHHHHHHHccCCCC-cEEEEeCC
Q 023645 192 EASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNV 230 (279)
Q Consensus 192 ~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~g-G~lv~dd~ 230 (279)
.+.+|+||-.... ...++.+.+.|+++ |.++.-..
T Consensus 258 -~~g~D~vid~~g~---~~~~~~~~~~l~~~~G~iv~~G~ 293 (373)
T 2fzw_A 258 -DGGVDYSFECIGN---VKVMRAALEACHKGWGVSVVVGV 293 (373)
T ss_dssp -TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSC
T ss_pred -CCCCCEEEECCCc---HHHHHHHHHhhccCCcEEEEEec
Confidence 2479999865442 24577889999999 99987443
No 345
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=95.77 E-value=0.013 Score=51.43 Aligned_cols=101 Identities=17% Similarity=0.123 Sum_probs=62.7
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.. ..+ ..+-.+....+......
T Consensus 137 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~----~g~~--~~~-~~~~~~~~~~~~~~~~~ 207 (327)
T 1qor_A 137 EIKPDEQFLFHAAAGGVGLIACQWAKAL--GAKLIGTVGTAQKAQSALK----AGAW--QVI-NYREEDLVERLKEITGG 207 (327)
T ss_dssp CCCTTCEEEESSTTBHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHHH----HTCS--EEE-ETTTSCHHHHHHHHTTT
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCC--EEE-ECCCccHHHHHHHHhCC
Confidence 3456789999993 4555666666654 4799999999888777765 2432 122 11111222222111113
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+|++|..... ..++.+.+.|++||.++.-.
T Consensus 208 ~~~D~vi~~~g~----~~~~~~~~~l~~~G~iv~~g 239 (327)
T 1qor_A 208 KKVRVVYDSVGR----DTWERSLDCLQRRGLMVSFG 239 (327)
T ss_dssp CCEEEEEECSCG----GGHHHHHHTEEEEEEEEECC
T ss_pred CCceEEEECCch----HHHHHHHHHhcCCCEEEEEe
Confidence 479999877652 45678889999999988743
No 346
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=95.67 E-value=0.017 Score=51.03 Aligned_cols=98 Identities=12% Similarity=0.138 Sum_probs=64.3
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc---ChhhHHHHHHhC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG---LAADSLKALILN 190 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g---d~~~~l~~~~~~ 190 (279)
...++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ ..|.. ..+-.. +..+.+....
T Consensus 152 ~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~~--~~~d~~~~~~~~~~~~~~~-- 222 (345)
T 2j3h_A 152 SPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGFD--DAFNYKEESDLTAALKRCF-- 222 (345)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCCS--EEEETTSCSCSHHHHHHHC--
T ss_pred CCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCc--eEEecCCHHHHHHHHHHHh--
Confidence 3456789999997 4566667777765 4799999999887776653 23432 122111 2333333321
Q ss_pred CCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 191 GEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 191 ~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.+.+|+||..... ..++.+.+.|++||.+++-
T Consensus 223 --~~~~d~vi~~~g~----~~~~~~~~~l~~~G~~v~~ 254 (345)
T 2j3h_A 223 --PNGIDIYFENVGG----KMLDAVLVNMNMHGRIAVC 254 (345)
T ss_dssp --TTCEEEEEESSCH----HHHHHHHTTEEEEEEEEEC
T ss_pred --CCCCcEEEECCCH----HHHHHHHHHHhcCCEEEEE
Confidence 2579999876543 3678889999999999874
No 347
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=95.66 E-value=0.021 Score=51.22 Aligned_cols=104 Identities=21% Similarity=0.226 Sum_probs=66.7
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEE--EcChhhHHHHHHhCCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIK--HGLAADSLKALILNGE 192 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~--~gd~~~~l~~~~~~~~ 192 (279)
...++.+||-+|+|. |..+..+++..+ ..+|+++|.+++..+.+++ .|...-+... ..+..+.+..+.
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~G-a~~Vi~~~~~~~~~~~a~~----lGa~~vi~~~~~~~~~~~~i~~~~---- 260 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAG-ASRIIGIDIDSKKYETAKK----FGVNEFVNPKDHDKPIQEVIVDLT---- 260 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHT-CSCEEEECSCTTHHHHHHT----TTCCEEECGGGCSSCHHHHHHHHT----
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----cCCcEEEccccCchhHHHHHHHhc----
Confidence 445678999999863 667777777764 2389999999998877654 4543211111 122333333331
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCC-cEEEEeCCC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVG-GIIVIDNVL 231 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~g-G~lv~dd~~ 231 (279)
.+.+|+||-.... ...++.+.+.|++| |.+++-...
T Consensus 261 ~gg~D~vid~~g~---~~~~~~~~~~l~~g~G~iv~~G~~ 297 (378)
T 3uko_A 261 DGGVDYSFECIGN---VSVMRAALECCHKGWGTSVIVGVA 297 (378)
T ss_dssp TSCBSEEEECSCC---HHHHHHHHHTBCTTTCEEEECSCC
T ss_pred CCCCCEEEECCCC---HHHHHHHHHHhhccCCEEEEEccc
Confidence 3489999865442 34578889999997 999885543
No 348
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=95.64 E-value=0.023 Score=50.53 Aligned_cols=101 Identities=15% Similarity=0.173 Sum_probs=65.0
Q ss_pred hhcCCCEEEEEc--CccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVG--VYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG--~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+| .|.|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+.... .
T Consensus 164 ~~~~g~~VlV~Gg~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~~~~~~----~ 233 (353)
T 4dup_A 164 GLTEGESVLIHGGTSGIGTTAIQLARAF--GAEVYATAGSTGKCEACER----LGAKRGINYRSEDFAAVIKAET----G 233 (353)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTTSCHHHHHHHHH----S
T ss_pred CCCCCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEeCCchHHHHHHHHHh----C
Confidence 345678999995 23566677777765 4799999999988877765 3433211111122333333321 3
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
..+|+||...... .++.+.+.|++||.++.-..
T Consensus 234 ~g~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~g~ 266 (353)
T 4dup_A 234 QGVDIILDMIGAA----YFERNIASLAKDGCLSIIAF 266 (353)
T ss_dssp SCEEEEEESCCGG----GHHHHHHTEEEEEEEEECCC
T ss_pred CCceEEEECCCHH----HHHHHHHHhccCCEEEEEEe
Confidence 5799998765543 46778889999999887443
No 349
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=95.59 E-value=0.017 Score=51.13 Aligned_cols=100 Identities=18% Similarity=0.226 Sum_probs=64.3
Q ss_pred hcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 117 ILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 117 ~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
..++++||-+|+ |.|..+..+++.. +.+|++++.+++..+.+++ .|...-+.....+..+.+.... ...
T Consensus 164 ~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~---~~~ 234 (343)
T 2eih_A 164 VRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAKA----LGADETVNYTHPDWPKEVRRLT---GGK 234 (343)
T ss_dssp CCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCSEEEETTSTTHHHHHHHHT---TTT
T ss_pred CCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCCEEEcCCcccHHHHHHHHh---CCC
Confidence 446789999998 5677777778775 4799999999988877754 3432111111112222222221 124
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+|+||.... . ..++.+.+.|+++|.++.-.
T Consensus 235 ~~d~vi~~~g-~---~~~~~~~~~l~~~G~~v~~g 265 (343)
T 2eih_A 235 GADKVVDHTG-A---LYFEGVIKATANGGRIAIAG 265 (343)
T ss_dssp CEEEEEESSC-S---SSHHHHHHHEEEEEEEEESS
T ss_pred CceEEEECCC-H---HHHHHHHHhhccCCEEEEEe
Confidence 7999987665 2 24667888999999988743
No 350
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=95.50 E-value=0.049 Score=47.41 Aligned_cols=103 Identities=16% Similarity=0.094 Sum_probs=66.8
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCE-EEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGC-LVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~-v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
...+++|+.||.|..++.+.++-- ... +.++|+++.+.+..+.++. ...++.+|+.+.......+ .+.+|
T Consensus 15 ~~~~vidLFaG~GG~~~g~~~aG~-~~~~v~a~E~d~~a~~ty~~N~~------~~~~~~~DI~~i~~~~i~~--~~~~D 85 (295)
T 2qrv_A 15 KPIRVLSLFDGIATGLLVLKDLGI-QVDRYIASEVCEDSITVGMVRHQ------GKIMYVGDVRSVTQKHIQE--WGPFD 85 (295)
T ss_dssp CCEEEEEETCTTTHHHHHHHHTTB-CEEEEEEECCCHHHHHHHHHHTT------TCEEEECCGGGCCHHHHHH--TCCCS
T ss_pred CCCEEEEeCcCccHHHHHHHHCCC-ccceEEEEECCHHHHHHHHHhCC------CCceeCCChHHccHHHhcc--cCCcC
Confidence 445899999999999988877521 122 6999999988877666542 2467789987753322111 24799
Q ss_pred EEEEeCC---------cc----c-----hHHHHHHHHccCCCCc------EEEEeCCC
Q 023645 198 FAFVDAE---------KR----M-----YQEYFELLLQLIRVGG------IIVIDNVL 231 (279)
Q Consensus 198 lI~id~~---------~~----~-----~~~~l~~~~~~Lk~gG------~lv~dd~~ 231 (279)
+++...+ .. + +.+++ .+.+.++|.. ++++.||-
T Consensus 86 ll~ggpPCQ~fS~ag~~r~g~~d~r~~L~~~~~-rii~~~~P~~~~~~P~~~l~ENV~ 142 (295)
T 2qrv_A 86 LVIGGSPCNDLSIVNPARKGLYEGTGRLFFEFY-RLLHDARPKEGDDRPFFWLFENVV 142 (295)
T ss_dssp EEEECCCCGGGBTTCTTCCTTTSTTTTHHHHHH-HHHHHHSCCTTCCCCCEEEEEEES
T ss_pred EEEecCCCccccccCccccccccccchhHHHHH-HHHHHhCcccccCCccEEEEEcCc
Confidence 9986542 10 1 12222 3345567762 89999985
No 351
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=95.48 E-value=0.022 Score=50.40 Aligned_cols=100 Identities=15% Similarity=0.109 Sum_probs=64.4
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh-hhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA-ADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~-~~~l~~~~~~~~~ 193 (279)
.. ++++||-+|+|. |..+..+++...++++|+++|.+++..+.+++ .|.. .++.-+- .+....+.. .
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~~---g 236 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGAD---YVSEMKDAESLINKLTD---G 236 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCS---EEECHHHHHHHHHHHHT---T
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCC---EEeccccchHHHHHhhc---C
Confidence 45 788999999863 56667777765114689999999988877765 3432 2221111 122222211 2
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+|+||-.... ...++.+.+.|++||.++.-.
T Consensus 237 ~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 269 (344)
T 2h6e_A 237 LGASIAIDLVGT---EETTYNLGKLLAQEGAIILVG 269 (344)
T ss_dssp CCEEEEEESSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred CCccEEEECCCC---hHHHHHHHHHhhcCCEEEEeC
Confidence 379999865543 235778889999999988743
No 352
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=95.47 E-value=0.046 Score=48.31 Aligned_cols=102 Identities=15% Similarity=0.208 Sum_probs=64.4
Q ss_pred HhhcCCCEEEEEcCc--cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEc--ChhhHHHHHHhC
Q 023645 115 VQILGAQRCIEVGVY--TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHG--LAADSLKALILN 190 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G--~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~g--d~~~~l~~~~~~ 190 (279)
....++++||-+|+| .|..+..+++... +.+|+++|.+++..+.+++ .|.. ..+-.. +..+.+....
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~-Ga~Vi~~~~~~~~~~~~~~----~g~~--~~~~~~~~~~~~~~~~~~-- 236 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-GATIIGVDVREEAVEAAKR----AGAD--YVINASMQDPLAEIRRIT-- 236 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHT-CCEEEEEESSHHHHHHHHH----HTCS--EEEETTTSCHHHHHHHHT--
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcC-CCeEEEEcCCHHHHHHHHH----hCCC--EEecCCCccHHHHHHHHh--
Confidence 345567899999987 4555566666541 4699999999988877754 3432 122111 2222233321
Q ss_pred CCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 191 GEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 191 ~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+.+|+||..... ...++.+.+.|+++|.++.-.
T Consensus 237 -~~~~~d~vi~~~g~---~~~~~~~~~~l~~~G~iv~~g 271 (347)
T 1jvb_A 237 -ESKGVDAVIDLNNS---EKTLSVYPKALAKQGKYVMVG 271 (347)
T ss_dssp -TTSCEEEEEESCCC---HHHHTTGGGGEEEEEEEEECC
T ss_pred -cCCCceEEEECCCC---HHHHHHHHHHHhcCCEEEEEC
Confidence 01579999876543 245777889999999998743
No 353
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=95.47 E-value=0.028 Score=49.93 Aligned_cols=101 Identities=12% Similarity=0.146 Sum_probs=62.6
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+.... ..
T Consensus 167 ~~~~g~~vlV~GasggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~~~d~~~~~~~~~~~~~~---~~ 237 (351)
T 1yb5_A 167 CVKAGESVLVHGASGGVGLAACQIARAY--GLKILGTAGTEEGQKIVLQ----NGAHEVFNHREVNYIDKIKKYV---GE 237 (351)
T ss_dssp CCCTTCEEEEETCSSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSEEEETTSTTHHHHHHHHH---CT
T ss_pred CCCCcCEEEEECCCChHHHHHHHHHHHC--CCEEEEEeCChhHHHHHHH----cCCCEEEeCCCchHHHHHHHHc---CC
Confidence 3456789999996 4566666677665 4799999999987776543 3432111111112222222221 12
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+|+||..... ..++.+.+.|++||.++.-.
T Consensus 238 ~~~D~vi~~~G~----~~~~~~~~~l~~~G~iv~~g 269 (351)
T 1yb5_A 238 KGIDIIIEMLAN----VNLSKDLSLLSHGGRVIVVG 269 (351)
T ss_dssp TCEEEEEESCHH----HHHHHHHHHEEEEEEEEECC
T ss_pred CCcEEEEECCCh----HHHHHHHHhccCCCEEEEEe
Confidence 479999866542 34677889999999988743
No 354
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=95.43 E-value=0.12 Score=40.32 Aligned_cols=102 Identities=14% Similarity=0.198 Sum_probs=67.9
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
.-|||+|-|+|..=-.+.+.+| +-+|+.+|-.-.... . ...+.-.++.||+.+.++...... ..+.-++-
T Consensus 42 GpVlElGLGNGRTydHLRe~~P-~R~I~vfDR~~~~hp------~--~~P~~e~~ilGdi~~tL~~~~~r~-g~~a~LaH 111 (174)
T 3iht_A 42 GPVYELGLGNGRTYHHLRQHVQ-GREIYVFERAVASHP------D--STPPEAQLILGDIRETLPATLERF-GATASLVH 111 (174)
T ss_dssp SCEEEECCTTCHHHHHHHHHCC-SSCEEEEESSCCCCG------G--GCCCGGGEEESCHHHHHHHHHHHH-CSCEEEEE
T ss_pred CceEEecCCCChhHHHHHHhCC-CCcEEEEEeeeccCC------C--CCCchHheecccHHHHHHHHHHhc-CCceEEEE
Confidence 4699999999999999999998 779999997432210 0 012234789999999887642211 34556666
Q ss_pred EeCCccchHH---H----HHHHHccCCCCcEEEEeCCCC
Q 023645 201 VDAEKRMYQE---Y----FELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 201 id~~~~~~~~---~----l~~~~~~Lk~gG~lv~dd~~~ 232 (279)
.|-...+... . -..+.++|.|||++|-+.-+.
T Consensus 112 aD~G~g~~~~d~a~a~~lsplI~~~la~GGi~vS~~pl~ 150 (174)
T 3iht_A 112 ADLGGHNREKNDRFARLISPLIEPHLAQGGLMVSSDRMY 150 (174)
T ss_dssp ECCCCSCHHHHHHHHHHHHHHHGGGEEEEEEEEESSCCC
T ss_pred eecCCCCcchhHHHHHhhhHHHHHHhcCCcEEEeCCccC
Confidence 6654222111 1 123358999999999987763
No 355
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=95.34 E-value=0.057 Score=47.81 Aligned_cols=100 Identities=14% Similarity=0.104 Sum_probs=65.0
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
.+++|+.||.|..++.+.++--..-.+.++|+++.+.+.-+.|+.. ..++.+|+.+....... ...+|+++
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~------~~~~~~DI~~~~~~~~~---~~~~D~l~ 74 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE------TNLLNRNIQQLTPQVIK---KWNVDTIL 74 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT------SCEECCCGGGCCHHHHH---HTTCCEEE
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC------CceeccccccCCHHHhc---cCCCCEEE
Confidence 4899999999999999887621013578999999988877776642 34667888765332211 23689998
Q ss_pred EeCC--------c--------c-chHHHHHHHHccCC-CCcEEEEeCCC
Q 023645 201 VDAE--------K--------R-MYQEYFELLLQLIR-VGGIIVIDNVL 231 (279)
Q Consensus 201 id~~--------~--------~-~~~~~l~~~~~~Lk-~gG~lv~dd~~ 231 (279)
...+ . . .+..++ .+.+.++ |. ++++.||-
T Consensus 75 ggpPCQ~fS~ag~~~~~~d~r~~L~~~~~-r~i~~~~~P~-~~vlENV~ 121 (333)
T 4h0n_A 75 MSPPCQPFTRNGKYLDDNDPRTNSFLYLI-GILDQLDNVD-YILMENVK 121 (333)
T ss_dssp ECCCCCCSEETTEECCTTCTTSCCHHHHH-HHGGGCTTCC-EEEEEECT
T ss_pred ecCCCcchhhhhhccCCcCcccccHHHHH-HHHHHhcCCC-EEEEecch
Confidence 6543 0 1 122333 3445565 74 88888885
No 356
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=95.34 E-value=0.1 Score=45.98 Aligned_cols=93 Identities=14% Similarity=0.171 Sum_probs=64.7
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
...++++||-+|+|. |..+..+++.. +++|+++|.+++..+.+++ .|... .+ .+. +. + ..
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~--v~--~~~-~~---~-----~~ 233 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAM--GAEVSVFARNEHKKQDALS----MGVKH--FY--TDP-KQ---C-----KE 233 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHT--TCEEEEECSSSTTHHHHHH----TTCSE--EE--SSG-GG---C-----CS
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHC--CCeEEEEeCCHHHHHHHHh----cCCCe--ec--CCH-HH---H-----hc
Confidence 456788999999864 67777788876 4799999999998877754 45431 22 332 11 1 23
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.+|+||-...... .++.+.+.|++||.++.-..
T Consensus 234 ~~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G~ 266 (348)
T 3two_A 234 ELDFIISTIPTHY---DLKDYLKLLTYNGDLALVGL 266 (348)
T ss_dssp CEEEEEECCCSCC---CHHHHHTTEEEEEEEEECCC
T ss_pred CCCEEEECCCcHH---HHHHHHHHHhcCCEEEEECC
Confidence 7999986544331 36678899999999998543
No 357
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=95.29 E-value=0.038 Score=49.01 Aligned_cols=102 Identities=13% Similarity=0.122 Sum_probs=63.2
Q ss_pred HhhcCC--CEEEEEcC--ccCHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHh
Q 023645 115 VQILGA--QRCIEVGV--YTGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALIL 189 (279)
Q Consensus 115 ~~~~~~--~~VLEiG~--G~G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~ 189 (279)
....++ ++||-.|+ |.|..+..+++.. ++ +|++++.+++..+.+++. .|....+.....+..+.+...
T Consensus 154 ~~~~~g~~~~vlI~GasggiG~~~~~~a~~~--Ga~~Vi~~~~~~~~~~~~~~~---~g~~~~~d~~~~~~~~~~~~~-- 226 (357)
T 2zb4_A 154 GHITAGSNKTMVVSGAAGACGSVAGQIGHFL--GCSRVVGICGTHEKCILLTSE---LGFDAAINYKKDNVAEQLRES-- 226 (357)
T ss_dssp SCCCTTSCCEEEESSTTBHHHHHHHHHHHHT--TCSEEEEEESCHHHHHHHHHT---SCCSEEEETTTSCHHHHHHHH--
T ss_pred cCCCCCCccEEEEECCCcHHHHHHHHHHHHC--CCCeEEEEeCCHHHHHHHHHH---cCCceEEecCchHHHHHHHHh--
Confidence 345567 89999997 4455666666654 46 999999998776665542 343211111111222222222
Q ss_pred CCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 190 NGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
. .+.+|++|..... ..++.+.+.|++||.++.-.
T Consensus 227 -~-~~~~d~vi~~~G~----~~~~~~~~~l~~~G~iv~~G 260 (357)
T 2zb4_A 227 -C-PAGVDVYFDNVGG----NISDTVISQMNENSHIILCG 260 (357)
T ss_dssp -C-TTCEEEEEESCCH----HHHHHHHHTEEEEEEEEECC
T ss_pred -c-CCCCCEEEECCCH----HHHHHHHHHhccCcEEEEEC
Confidence 1 2379999876652 56788899999999998743
No 358
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=95.29 E-value=0.013 Score=49.98 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=40.2
Q ss_pred EEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCcc-----------------chHHHHHHHHccCCCCcEEEEe
Q 023645 173 VKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-----------------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 173 v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~-----------------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.+++++|+.+.+..+. +++||+||+|++.. .....++.+.++|+|||.+++.
T Consensus 5 ~~l~~gD~~~~l~~l~----~~~vdlI~~DPPY~~~~~~~d~~~~~~~y~~~~~~~l~~~~~~Lk~~g~i~v~ 73 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVE----NKSVQLAVIDPPYNLSKADWDSFDSHNEFLAFTYRWIDKVLDKLDKDGSLYIF 73 (260)
T ss_dssp SSEEECCHHHHHHHSC----TTCEEEEEECCCCSSCSSGGGCCSSHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CeEEechHHHHHHhcc----ccccCEEEECCCCCCCcccccccCCHHHHHHHHHHHHHHHHHHhcCCeEEEEE
Confidence 4688999998887652 46899999998732 2244567778999999999885
No 359
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.27 E-value=0.015 Score=51.31 Aligned_cols=54 Identities=11% Similarity=0.213 Sum_probs=41.4
Q ss_pred CcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCcc-----------------chHHHHHHHHccCCCCcEEEEe
Q 023645 171 HKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR-----------------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 171 ~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~-----------------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
++.++++||+.+.++.+. +++||+||+|++.. .....++.+.++|+|||.+++.
T Consensus 13 ~~~~ii~gD~~~~l~~l~----~~svDlI~tDPPY~~~~~~~y~~~~~~~~~~~l~~~l~~~~rvLk~~G~i~i~ 83 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFP----EESISLVMTSPPFALQRKKEYGNLEQHEYVDWFLSFAKVVNKKLKPDGSFVVD 83 (323)
T ss_dssp SSEEEEESCHHHHGGGSC----SSCEEEEEECCCCSSSCSCSSCSCHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCceEEeCcHHHHHhhCC----CCCeeEEEECCCCCCCcccccCCcCHHHHHHHHHHHHHHHHHHCcCCcEEEEE
Confidence 457899999987765442 57899999998732 2456677888999999998873
No 360
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=95.26 E-value=0.044 Score=48.07 Aligned_cols=95 Identities=15% Similarity=0.030 Sum_probs=63.5
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
.+|||+.||.|..++-+-++- --.+.++|+++.+.+.-+.|+. -.++.+|+.+..... -..+|+++
T Consensus 1 mkvidLFsG~GG~~~G~~~aG--~~~v~a~e~d~~a~~ty~~N~~-------~~~~~~DI~~i~~~~-----~~~~D~l~ 66 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAG--FRIICANEYDKSIWKTYESNHS-------AKLIKGDISKISSDE-----FPKCDGII 66 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTT--CEEEEEEECCTTTHHHHHHHCC-------SEEEESCGGGCCGGG-----SCCCSEEE
T ss_pred CeEEEeCcCccHHHHHHHHCC--CEEEEEEeCCHHHHHHHHHHCC-------CCcccCChhhCCHhh-----CCcccEEE
Confidence 379999999999998887651 1256799999998887776652 267889987653221 35689887
Q ss_pred EeCC------------ccc-----hHHHHHHHHccCCCCcEEEEeCCC
Q 023645 201 VDAE------------KRM-----YQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 201 id~~------------~~~-----~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
...+ ..+ +.+++ .+...++|. ++++.||-
T Consensus 67 ggpPCQ~fS~ag~~~g~~d~R~~L~~~~~-r~i~~~~Pk-~~~~ENV~ 112 (331)
T 3ubt_Y 67 GGPPSQSWSEGGSLRGIDDPRGKLFYEYI-RILKQKKPI-FFLAENVK 112 (331)
T ss_dssp CCCCGGGTEETTEECCTTCGGGHHHHHHH-HHHHHHCCS-EEEEEECC
T ss_pred ecCCCCCcCCCCCccCCCCchhHHHHHHH-HHHhccCCe-EEEeeeec
Confidence 4432 111 22222 334567885 88899984
No 361
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=95.22 E-value=0.043 Score=49.24 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=64.0
Q ss_pred hcCCCEEEEEcCc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC---hhhHHHHHHhCCC
Q 023645 117 ILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL---AADSLKALILNGE 192 (279)
Q Consensus 117 ~~~~~~VLEiG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd---~~~~l~~~~~~~~ 192 (279)
..++++||-+|+| .|..+..+++..+ ..+|++++.+++..+.+++ .|.. .++..+ -.+....+.+...
T Consensus 193 ~~~g~~VlV~GaG~vG~~aiqlak~~G-a~~Vi~~~~~~~~~~~~~~----lGa~---~vi~~~~~~~~~~~~~v~~~~~ 264 (380)
T 1vj0_A 193 SFAGKTVVIQGAGPLGLFGVVIARSLG-AENVIVIAGSPNRLKLAEE----IGAD---LTLNRRETSVEERRKAIMDITH 264 (380)
T ss_dssp CCBTCEEEEECCSHHHHHHHHHHHHTT-BSEEEEEESCHHHHHHHHH----TTCS---EEEETTTSCHHHHHHHHHHHTT
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHHcC-CceEEEEcCCHHHHHHHHH----cCCc---EEEeccccCcchHHHHHHHHhC
Confidence 4567899999965 3666677777753 1599999999988777653 4542 222222 1122222211111
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
...+|+||-..... ..++.+.+.|++||.++.-..
T Consensus 265 g~g~Dvvid~~g~~---~~~~~~~~~l~~~G~iv~~G~ 299 (380)
T 1vj0_A 265 GRGADFILEATGDS---RALLEGSELLRRGGFYSVAGV 299 (380)
T ss_dssp TSCEEEEEECSSCT---THHHHHHHHEEEEEEEEECCC
T ss_pred CCCCcEEEECCCCH---HHHHHHHHHHhcCCEEEEEec
Confidence 23699998655432 346778899999999987443
No 362
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=95.08 E-value=0.037 Score=48.93 Aligned_cols=99 Identities=15% Similarity=0.149 Sum_probs=62.4
Q ss_pred CCCEEEEEcCcc-CHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 119 GAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 119 ~~~~VLEiG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
++++||-+|+|. |..+..+++.. ++ +|++++.+++..+.+++ .|...-+.....+..+.+.... ....+
T Consensus 167 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~---~g~g~ 237 (348)
T 2d8a_A 167 SGKSVLITGAGPLGLLGIAVAKAS--GAYPVIVSEPSDFRRELAKK----VGADYVINPFEEDVVKEVMDIT---DGNGV 237 (348)
T ss_dssp TTCCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHHHHHH----HTCSEEECTTTSCHHHHHHHHT---TTSCE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHH----hCCCEEECCCCcCHHHHHHHHc---CCCCC
Confidence 678999999853 56667777765 45 89999999988777654 3432111111122222232221 12469
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
|+||..... ...++.+.+.|+++|.++.-.
T Consensus 238 D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 267 (348)
T 2d8a_A 238 DVFLEFSGA---PKALEQGLQAVTPAGRVSLLG 267 (348)
T ss_dssp EEEEECSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred CEEEECCCC---HHHHHHHHHHHhcCCEEEEEc
Confidence 999865542 245778889999999988743
No 363
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=94.98 E-value=0.043 Score=48.70 Aligned_cols=101 Identities=10% Similarity=0.144 Sum_probs=62.4
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+... ...
T Consensus 159 ~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~g~~~~~~~~~~~~~~~~~~~---~~~ 229 (354)
T 2j8z_A 159 NVQAGDYVLIHAGLSGVGTAAIQLTRMA--GAIPLVTAGSQKKLQMAEK----LGAAAGFNYKKEDFSEATLKF---TKG 229 (354)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHH----HTCSEEEETTTSCHHHHHHHH---TTT
T ss_pred CCCCCCEEEEECCccHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHH----cCCcEEEecCChHHHHHHHHH---hcC
Confidence 3456789999984 4566666666665 4799999999988777743 243211111111222222222 112
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
..+|++|...... .++.+.+.|++||.++.-.
T Consensus 230 ~~~d~vi~~~G~~----~~~~~~~~l~~~G~iv~~G 261 (354)
T 2j8z_A 230 AGVNLILDCIGGS----YWEKNVNCLALDGRWVLYG 261 (354)
T ss_dssp SCEEEEEESSCGG----GHHHHHHHEEEEEEEEECC
T ss_pred CCceEEEECCCch----HHHHHHHhccCCCEEEEEe
Confidence 4799998766543 3667788999999998743
No 364
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=94.97 E-value=0.043 Score=48.94 Aligned_cols=97 Identities=16% Similarity=0.125 Sum_probs=62.9
Q ss_pred CCCEEEEEc-Cc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 119 GAQRCIEVG-VY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 119 ~~~~VLEiG-~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
++++||-+| +| .|..+..+++.+. +.+|++++.+++..+.+++ .|... ++... .+....+.+. ..+.+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~~----lGad~---vi~~~-~~~~~~v~~~-~~~g~ 240 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKS----LGAHH---VIDHS-KPLAAEVAAL-GLGAP 240 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHHH----TTCSE---EECTT-SCHHHHHHTT-CSCCE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHHH----cCCCE---EEeCC-CCHHHHHHHh-cCCCc
Confidence 567899998 43 4777778887643 5799999999988777754 45431 22111 1222222222 24689
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|+||-... ....++.+.++|++||.++.-
T Consensus 241 Dvvid~~g---~~~~~~~~~~~l~~~G~iv~~ 269 (363)
T 4dvj_A 241 AFVFSTTH---TDKHAAEIADLIAPQGRFCLI 269 (363)
T ss_dssp EEEEECSC---HHHHHHHHHHHSCTTCEEEEC
T ss_pred eEEEECCC---chhhHHHHHHHhcCCCEEEEE
Confidence 98886443 224677888999999999874
No 365
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=94.95 E-value=0.02 Score=49.78 Aligned_cols=53 Identities=17% Similarity=0.255 Sum_probs=39.0
Q ss_pred cEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCcc---c--------------------hHHHHHHHHccCCCCcEEEEe
Q 023645 172 KVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR---M--------------------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 172 ~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~---~--------------------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
++++++||+.+.++.+ .+++||+|++|++.. . +...++.+.++|+|||.+++.
T Consensus 21 ~~~i~~gD~~~~l~~l----~~~s~DlIvtdPPY~~~~~y~~~~~~~~~~~~~~~~l~~l~~~~~~~~rvLk~~G~l~i~ 96 (297)
T 2zig_A 21 VHRLHVGDAREVLASF----PEASVHLVVTSPPYWTLKRYEDTPGQLGHIEDYEAFLDELDRVWREVFRLLVPGGRLVIV 96 (297)
T ss_dssp CEEEEESCHHHHHTTS----CTTCEEEEEECCCCCCCC-------CCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred CCEEEECcHHHHHhhC----CCCceeEEEECCCCCCccccCCChhhhcccccHHHHHHHHHHHHHHHHHHcCCCcEEEEE
Confidence 5799999999876544 147899999998732 1 123456778999999998763
No 366
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=94.88 E-value=0.07 Score=47.10 Aligned_cols=97 Identities=15% Similarity=0.189 Sum_probs=63.0
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+|+ |.|..+..+++.. +++|+++ .+++..+.+++ .|... +. ...+..+.+.... ..
T Consensus 147 ~~~~g~~VlV~Ga~g~iG~~~~q~a~~~--Ga~Vi~~-~~~~~~~~~~~----lGa~~-i~-~~~~~~~~~~~~~---~~ 214 (343)
T 3gaz_A 147 QVQDGQTVLIQGGGGGVGHVAIQIALAR--GARVFAT-ARGSDLEYVRD----LGATP-ID-ASREPEDYAAEHT---AG 214 (343)
T ss_dssp CCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEE-ECHHHHHHHHH----HTSEE-EE-TTSCHHHHHHHHH---TT
T ss_pred CCCCCCEEEEecCCCHHHHHHHHHHHHC--CCEEEEE-eCHHHHHHHHH----cCCCE-ec-cCCCHHHHHHHHh---cC
Confidence 3456789999994 3577777788776 4799999 88877766654 35432 22 1222323332221 13
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
..+|+||-.... ..++.+.+.|+++|.++.-
T Consensus 215 ~g~D~vid~~g~----~~~~~~~~~l~~~G~iv~~ 245 (343)
T 3gaz_A 215 QGFDLVYDTLGG----PVLDASFSAVKRFGHVVSC 245 (343)
T ss_dssp SCEEEEEESSCT----HHHHHHHHHEEEEEEEEES
T ss_pred CCceEEEECCCc----HHHHHHHHHHhcCCeEEEE
Confidence 579998865542 4677888999999999873
No 367
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=94.87 E-value=0.13 Score=44.41 Aligned_cols=92 Identities=15% Similarity=0.170 Sum_probs=62.5
Q ss_pred hcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh-hhHHHHHHhCCCC
Q 023645 117 ILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA-ADSLKALILNGEA 193 (279)
Q Consensus 117 ~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~-~~~l~~~~~~~~~ 193 (279)
..++++||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|.. .++.-+- .+....+
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~---~~~~~~~~~~~~~~~------ 187 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPLA----LGAE---EAATYAEVPERAKAW------ 187 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHHH----TTCS---EEEEGGGHHHHHHHT------
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHh----cCCC---EEEECCcchhHHHHh------
Confidence 456789999997 4567777778776 4699999999988777654 3432 2222111 2222222
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
..+|+||. ... ..++.+.+.|+++|.++.-
T Consensus 188 ~~~d~vid-~g~----~~~~~~~~~l~~~G~~v~~ 217 (302)
T 1iz0_A 188 GGLDLVLE-VRG----KEVEESLGLLAHGGRLVYI 217 (302)
T ss_dssp TSEEEEEE-CSC----TTHHHHHTTEEEEEEEEEC
T ss_pred cCceEEEE-CCH----HHHHHHHHhhccCCEEEEE
Confidence 57999987 554 3567888999999998863
No 368
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.81 E-value=0.028 Score=49.49 Aligned_cols=53 Identities=15% Similarity=0.117 Sum_probs=40.6
Q ss_pred cEEEE-EcChhhHHHHHHhCCCCCcEEEEEEeCCcc--------------chHHHHHHHHccCCCCcEEEEe
Q 023645 172 KVKIK-HGLAADSLKALILNGEASSYDFAFVDAEKR--------------MYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 172 ~v~~~-~gd~~~~l~~~~~~~~~~~fDlI~id~~~~--------------~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
..+++ +||+.+.+..+. +++||+||+|++.. .....+..+.++|+|||.+++.
T Consensus 38 ~~~l~i~gD~l~~L~~l~----~~svDlI~tDPPY~~~~d~~~~~~~~~~~~~~~l~~~~rvLk~~G~i~i~ 105 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLP----DDSVQLIICDPPYNIMLADWDDHMDYIGWAKRWLAEAERVLSPTGSIAIF 105 (319)
T ss_dssp EEEEEEECCHHHHHHTSC----TTCEEEEEECCCSBCCGGGGGTCSSHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cceEEECCcHHHHHHhCc----cCCcCEEEECCCCCCCCCCccCHHHHHHHHHHHHHHHHHHcCCCeEEEEE
Confidence 46788 999998887552 46899999998732 1345567778999999999884
No 369
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=94.75 E-value=0.099 Score=46.33 Aligned_cols=93 Identities=12% Similarity=0.114 Sum_probs=58.9
Q ss_pred CEEEEEcCcc-CHHH-HHHH-HHCCCCCE-EEEEeCChh---HHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 121 QRCIEVGVYT-GYSS-LAIA-LVLPESGC-LVACERDAR---SLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 121 ~~VLEiG~G~-G~~t-~~la-~~~~~~~~-v~~iD~s~~---~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
++||-+|+|. |..+ ..++ +.. +++ |++++.+++ ..+.+++ .|.. .+.....+..+ +... .
T Consensus 174 ~~VlV~GaG~vG~~a~iqla~k~~--Ga~~Vi~~~~~~~~~~~~~~~~~----lGa~-~v~~~~~~~~~-i~~~-----~ 240 (357)
T 2b5w_A 174 SSAFVLGNGSLGLLTLAMLKVDDK--GYENLYCLGRRDRPDPTIDIIEE----LDAT-YVDSRQTPVED-VPDV-----Y 240 (357)
T ss_dssp CEEEEECCSHHHHHHHHHHHHCTT--CCCEEEEEECCCSSCHHHHHHHH----TTCE-EEETTTSCGGG-HHHH-----S
T ss_pred CEEEEECCCHHHHHHHHHHHHHHc--CCcEEEEEeCCcccHHHHHHHHH----cCCc-ccCCCccCHHH-HHHh-----C
Confidence 8999999742 5555 6666 654 455 999999988 7777653 4432 12111123333 3333 1
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+.+|+||-.... ...++.+.+.|++||.++.-.
T Consensus 241 gg~Dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g 273 (357)
T 2b5w_A 241 EQMDFIYEATGF---PKHAIQSVQALAPNGVGALLG 273 (357)
T ss_dssp CCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred CCCCEEEECCCC---hHHHHHHHHHHhcCCEEEEEe
Confidence 379999855432 245778889999999998744
No 370
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=94.71 E-value=0.097 Score=46.47 Aligned_cols=100 Identities=21% Similarity=0.181 Sum_probs=63.6
Q ss_pred HhhcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh-hHHHHHHhCCC
Q 023645 115 VQILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA-DSLKALILNGE 192 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~-~~l~~~~~~~~ 192 (279)
+...++++||-+|+|. |..+..+++.. +++|++++.+++..+.+++ .|.. .++.-.-. +....+
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~--Ga~Vi~~~~~~~~~~~~~~----lGa~---~v~~~~~~~~~~~~~----- 240 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAM--GAETYVISRSSRKREDAMK----MGAD---HYIATLEEGDWGEKY----- 240 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSSTTHHHHHH----HTCS---EEEEGGGTSCHHHHS-----
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH----cCCC---EEEcCcCchHHHHHh-----
Confidence 3455778999999853 66667777765 4689999999988877765 3432 22221111 222332
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+.+|+||....... ...++.+.+.|++||.++.-.
T Consensus 241 ~~~~D~vid~~g~~~-~~~~~~~~~~l~~~G~iv~~g 276 (360)
T 1piw_A 241 FDTFDLIVVCASSLT-DIDFNIMPKAMKVGGRIVSIS 276 (360)
T ss_dssp CSCEEEEEECCSCST-TCCTTTGGGGEEEEEEEEECC
T ss_pred hcCCCEEEECCCCCc-HHHHHHHHHHhcCCCEEEEec
Confidence 257999986544300 123556788999999988643
No 371
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=94.44 E-value=0.099 Score=46.13 Aligned_cols=75 Identities=8% Similarity=-0.028 Sum_probs=51.6
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEE-EEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCL-VACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v-~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
..+++|+.||.|..++.+.++--..-.+ .++|+++.+.+..+.|+.. .++++|+.+....... ...+|+
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~-------~~~~~DI~~~~~~~i~---~~~~Di 79 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKE-------EVQVKNLDSISIKQIE---SLNCNT 79 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCC-------CCBCCCTTTCCHHHHH---HTCCCE
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCC-------CcccCChhhcCHHHhc---cCCCCE
Confidence 4489999999999999888752101356 7999999999888888742 1556777664322111 136899
Q ss_pred EEEeCC
Q 023645 199 AFVDAE 204 (279)
Q Consensus 199 I~id~~ 204 (279)
++...+
T Consensus 80 l~ggpP 85 (327)
T 3qv2_A 80 WFMSPP 85 (327)
T ss_dssp EEECCC
T ss_pred EEecCC
Confidence 986544
No 372
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=94.09 E-value=0.13 Score=45.43 Aligned_cols=95 Identities=17% Similarity=0.236 Sum_probs=61.7
Q ss_pred CCCEEEEEc-Cc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 119 GAQRCIEVG-VY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 119 ~~~~VLEiG-~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
++++||-+| +| .|..+..+++.. +++|++++.+++..+.+++ .|... +--...+..+.+... ....+
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~-vi~~~~~~~~~~~~~----~~~g~ 218 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY--GLRVITTASRNETIEWTKK----MGADI-VLNHKESLLNQFKTQ----GIELV 218 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT--TCEEEEECCSHHHHHHHHH----HTCSE-EECTTSCHHHHHHHH----TCCCE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcE-EEECCccHHHHHHHh----CCCCc
Confidence 678999994 43 466667777765 4799999999988877765 34321 111111232333332 14579
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
|+||-.... ...++.+.++|+++|.++.
T Consensus 219 Dvv~d~~g~---~~~~~~~~~~l~~~G~iv~ 246 (346)
T 3fbg_A 219 DYVFCTFNT---DMYYDDMIQLVKPRGHIAT 246 (346)
T ss_dssp EEEEESSCH---HHHHHHHHHHEEEEEEEEE
T ss_pred cEEEECCCc---hHHHHHHHHHhccCCEEEE
Confidence 998865432 3456788899999999975
No 373
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=94.05 E-value=0.17 Score=44.40 Aligned_cols=48 Identities=4% Similarity=0.042 Sum_probs=38.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCCh---hHHHHHHHHHHHhC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDA---RSLEVAKKYYERAG 168 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~---~~~~~a~~~~~~~g 168 (279)
.++..|||..||+|..+...... +-+.+|+|+++ +.++.+++++...+
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 46779999999999988887765 45899999999 99999999988766
No 374
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=93.87 E-value=0.078 Score=46.62 Aligned_cols=59 Identities=7% Similarity=-0.032 Sum_probs=45.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChh
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAA 181 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~ 181 (279)
.++..|||..||+|..+....+. +-+.+|+|+++...+.++++++..+.. ...+++|+.
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~~--~~~~~~~~~ 309 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE---SRKWISFEMKPEYVAASAFRFLDNNIS--EEKITDIYN 309 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHGGGSCSCSC--HHHHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCCEEEEeCCHHHHHHHHHHHHhcccc--hHHHHHHHH
Confidence 46779999999999988776654 459999999999999999998866543 334444443
No 375
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=93.85 E-value=0.11 Score=47.71 Aligned_cols=101 Identities=15% Similarity=0.180 Sum_probs=64.5
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh-------------
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA------------- 180 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~------------- 180 (279)
...++++||-+|+ |.|..+..+++.. ++++++++.+++..+.+++ .|...-+.....|.
T Consensus 225 ~~~~g~~VlV~GasG~vG~~avqlak~~--Ga~vi~~~~~~~~~~~~~~----lGa~~vi~~~~~d~~~~~~~~~~~~~~ 298 (456)
T 3krt_A 225 GMKQGDNVLIWGASGGLGSYATQFALAG--GANPICVVSSPQKAEICRA----MGAEAIIDRNAEGYRFWKDENTQDPKE 298 (456)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----HTCCEEEETTTTTCCSEEETTEECHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCeEEEEECCHHHHHHHHh----hCCcEEEecCcCcccccccccccchHH
Confidence 3456789999997 3577777788876 4799999999888777754 34432111111111
Q ss_pred ----hhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 181 ----ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 181 ----~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+.+..+. +...+|+||-.... ..++.+.++|++||.++.-.
T Consensus 299 ~~~~~~~i~~~t---~g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 344 (456)
T 3krt_A 299 WKRFGKRIRELT---GGEDIDIVFEHPGR----ETFGASVFVTRKGGTITTCA 344 (456)
T ss_dssp HHHHHHHHHHHH---TSCCEEEEEECSCH----HHHHHHHHHEEEEEEEEESC
T ss_pred HHHHHHHHHHHh---CCCCCcEEEEcCCc----hhHHHHHHHhhCCcEEEEEe
Confidence 02222221 13589998865443 46778889999999999743
No 376
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=93.68 E-value=0.18 Score=45.29 Aligned_cols=94 Identities=12% Similarity=0.087 Sum_probs=66.8
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCC-cEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSH-KVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~-~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
+.+||.|+.+.|..+.+++.. .++.+.-|--.....+.|++.+++.. .+++... .+. . ...||+
T Consensus 39 ~~~~~~~~d~~gal~~~~~~~-----~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~---~-----~~~~~~ 103 (375)
T 4dcm_A 39 RGPVLILNDAFGALSCALAEH-----KPYSIGDSYISELATRENLRLNGIDESSVKFLDS--TAD---Y-----PQQPGV 103 (375)
T ss_dssp CSCEEEECCSSSHHHHHTGGG-----CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEEET--TSC---C-----CSSCSE
T ss_pred CCCEEEECCCCCHHHHhhccC-----CceEEEhHHHHHHHHHHHHHHcCCCccceEeccc--ccc---c-----ccCCCE
Confidence 357999999999999888743 34555445555567788999988865 3666522 111 1 478999
Q ss_pred EEEeCCc--cchHHHHHHHHccCCCCcEEEEe
Q 023645 199 AFVDAEK--RMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 199 I~id~~~--~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|++-.++ ......+..+...|++|+.+++-
T Consensus 104 v~~~lpk~~~~l~~~L~~l~~~l~~~~~i~~~ 135 (375)
T 4dcm_A 104 VLIKVPKTLALLEQQLRALRKVVTSDTRIIAG 135 (375)
T ss_dssp EEEECCSCHHHHHHHHHHHHTTCCTTSEEEEE
T ss_pred EEEEcCCCHHHHHHHHHHHHhhCCCCCEEEEE
Confidence 9987763 34566788888999999988764
No 377
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=93.53 E-value=0.058 Score=47.55 Aligned_cols=96 Identities=10% Similarity=0.143 Sum_probs=62.1
Q ss_pred hhcCCCEEEEEcCcc-CHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEE---cChhhHHHHHHhC
Q 023645 116 QILGAQRCIEVGVYT-GYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKH---GLAADSLKALILN 190 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~-G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~---gd~~~~l~~~~~~ 190 (279)
.. ++++||-+|+|. |..+..+++.. ++ +|++++.+++..+.+++. . + .++. .+..+.+....
T Consensus 162 ~~-~g~~VlV~GaG~vG~~~~q~a~~~--Ga~~Vi~~~~~~~~~~~~~~l-a-----~--~v~~~~~~~~~~~~~~~~-- 228 (343)
T 2dq4_A 162 GV-SGKSVLITGAGPIGLMAAMVVRAS--GAGPILVSDPNPYRLAFARPY-A-----D--RLVNPLEEDLLEVVRRVT-- 228 (343)
T ss_dssp CC-TTSCEEEECCSHHHHHHHHHHHHT--TCCSEEEECSCHHHHGGGTTT-C-----S--EEECTTTSCHHHHHHHHH--
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHc--CCCEEEEECCCHHHHHHHHHh-H-----H--hccCcCccCHHHHHHHhc--
Confidence 44 678999999853 56667777775 45 899999998877766553 1 1 1121 12223333221
Q ss_pred CCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 191 GEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 191 ~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
...+|+||-.... ...++.+.+.|+++|.++.-.
T Consensus 229 --~~g~D~vid~~g~---~~~~~~~~~~l~~~G~iv~~g 262 (343)
T 2dq4_A 229 --GSGVEVLLEFSGN---EAAIHQGLMALIPGGEARILG 262 (343)
T ss_dssp --SSCEEEEEECSCC---HHHHHHHHHHEEEEEEEEECC
T ss_pred --CCCCCEEEECCCC---HHHHHHHHHHHhcCCEEEEEe
Confidence 2469999865543 245778889999999988743
No 378
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=93.52 E-value=0.29 Score=43.59 Aligned_cols=98 Identities=15% Similarity=0.147 Sum_probs=62.1
Q ss_pred cCCCEEEEEcCc--cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 118 LGAQRCIEVGVY--TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 118 ~~~~~VLEiG~G--~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
.++.+||-+|++ .|..+..+++.. +++|+++. +++..+.+++ .|...-+.....+..+.+..+. .+.
T Consensus 163 ~~g~~VlV~Ga~G~vG~~a~qla~~~--Ga~Vi~~~-~~~~~~~~~~----lGa~~vi~~~~~~~~~~v~~~t----~g~ 231 (371)
T 3gqv_A 163 SKPVYVLVYGGSTATATVTMQMLRLS--GYIPIATC-SPHNFDLAKS----RGAEEVFDYRAPNLAQTIRTYT----KNN 231 (371)
T ss_dssp SSCCEEEEESTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHHH----TTCSEEEETTSTTHHHHHHHHT----TTC
T ss_pred CCCcEEEEECCCcHHHHHHHHHHHHC--CCEEEEEe-CHHHHHHHHH----cCCcEEEECCCchHHHHHHHHc----cCC
Confidence 567899999983 678888888876 46888885 7877666544 4543212222233333333321 345
Q ss_pred EEEEEEeCCccchHHHHHHHHccC-CCCcEEEEeC
Q 023645 196 YDFAFVDAEKRMYQEYFELLLQLI-RVGGIIVIDN 229 (279)
Q Consensus 196 fDlI~id~~~~~~~~~l~~~~~~L-k~gG~lv~dd 229 (279)
+|+||-.... ...++.+.+.| ++||.++.-.
T Consensus 232 ~d~v~d~~g~---~~~~~~~~~~l~~~~G~iv~~g 263 (371)
T 3gqv_A 232 LRYALDCITN---VESTTFCFAAIGRAGGHYVSLN 263 (371)
T ss_dssp CCEEEESSCS---HHHHHHHHHHSCTTCEEEEESS
T ss_pred ccEEEECCCc---hHHHHHHHHHhhcCCCEEEEEe
Confidence 9998865442 24567778888 6999988743
No 379
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=93.47 E-value=0.29 Score=37.00 Aligned_cols=93 Identities=13% Similarity=0.066 Sum_probs=58.9
Q ss_pred CEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCcEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYD 197 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~fD 197 (279)
.+|+=+|+ |..+..+++.+. .+.+|+++|.+++.++.+++ . .+.++.+|..+. +... .-...|
T Consensus 8 ~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~----g~~~i~gd~~~~~~l~~a----~i~~ad 73 (140)
T 3fwz_A 8 NHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----R----GVRAVLGNAANEEIMQLA----HLECAK 73 (140)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----T----TCEEEESCTTSHHHHHHT----TGGGCS
T ss_pred CCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----c----CCCEEECCCCCHHHHHhc----CcccCC
Confidence 46888887 666666666542 25689999999988766553 2 257788988642 3321 135789
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+|++..+........-...+.+.|+..++.
T Consensus 74 ~vi~~~~~~~~n~~~~~~a~~~~~~~~iia 103 (140)
T 3fwz_A 74 WLILTIPNGYEAGEIVASARAKNPDIEIIA 103 (140)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHCSSSEEEE
T ss_pred EEEEECCChHHHHHHHHHHHHHCCCCeEEE
Confidence 998765543333333344566777777665
No 380
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=93.45 E-value=0.19 Score=45.90 Aligned_cols=100 Identities=17% Similarity=0.127 Sum_probs=63.7
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh-------------
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA------------- 180 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~------------- 180 (279)
...++++||-+|+ |.|..+..+++.. ++++++++.+++..+.+++ .|...-+.....+.
T Consensus 217 ~~~~g~~VlV~GasG~iG~~a~qla~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~~i~~~~~~~~~~~~~~~~~~~~ 290 (447)
T 4a0s_A 217 QMKQGDIVLIWGASGGLGSYAIQFVKNG--GGIPVAVVSSAQKEAAVRA----LGCDLVINRAELGITDDIADDPRRVVE 290 (447)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCCCEEEHHHHTCCTTGGGCHHHHHH
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCEEEecccccccccccccccccch
Confidence 4456789999996 3466777777765 4799999999888777643 45432121111111
Q ss_pred -----hhHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 181 -----ADSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 181 -----~~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
.+.+.... ...+|+||-.... ..++.+.+.|++||.++.-.
T Consensus 291 ~~~~~~~~v~~~~----g~g~Dvvid~~G~----~~~~~~~~~l~~~G~iv~~G 336 (447)
T 4a0s_A 291 TGRKLAKLVVEKA----GREPDIVFEHTGR----VTFGLSVIVARRGGTVVTCG 336 (447)
T ss_dssp HHHHHHHHHHHHH----SSCCSEEEECSCH----HHHHHHHHHSCTTCEEEESC
T ss_pred hhhHHHHHHHHHh----CCCceEEEECCCc----hHHHHHHHHHhcCCEEEEEe
Confidence 11122221 3579999865553 35778889999999998744
No 381
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=92.80 E-value=0.081 Score=46.20 Aligned_cols=92 Identities=14% Similarity=0.204 Sum_probs=57.9
Q ss_pred EEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh-hhHHHHHHhCCCCCcEEE
Q 023645 122 RCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA-ADSLKALILNGEASSYDF 198 (279)
Q Consensus 122 ~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~-~~~l~~~~~~~~~~~fDl 198 (279)
+||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|... .+-..+. .+....+ ..+.+|+
T Consensus 152 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~--~i~~~~~~~~~~~~~----~~~~~d~ 219 (328)
T 1xa0_A 152 PVLVTGATGGVGSLAVSMLAKR--GYTVEASTGKAAEHDYLRV----LGAKE--VLAREDVMAERIRPL----DKQRWAA 219 (328)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCTTCHHHHHH----TTCSE--EEECC---------C----CSCCEEE
T ss_pred eEEEecCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHH----cCCcE--EEecCCcHHHHHHHh----cCCcccE
Confidence 7999996 4577777888876 4689999999888777754 45332 1111111 1111111 1347999
Q ss_pred EEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 199 AFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 199 I~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
||-..... .++.+.+.|++||.++.-.
T Consensus 220 vid~~g~~----~~~~~~~~l~~~G~~v~~G 246 (328)
T 1xa0_A 220 AVDPVGGR----TLATVLSRMRYGGAVAVSG 246 (328)
T ss_dssp EEECSTTT----THHHHHHTEEEEEEEEECS
T ss_pred EEECCcHH----HHHHHHHhhccCCEEEEEe
Confidence 88654432 4677889999999998743
No 382
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=92.74 E-value=0.42 Score=42.23 Aligned_cols=107 Identities=12% Similarity=0.119 Sum_probs=59.5
Q ss_pred hhcCC-CEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEE---cChhhHHHHHHh
Q 023645 116 QILGA-QRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKH---GLAADSLKALIL 189 (279)
Q Consensus 116 ~~~~~-~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~---gd~~~~l~~~~~ 189 (279)
...++ .+||-+|+ +.|..+..+++.. +++++++..+++..+..++.++..|...-+.... .+..+.+.....
T Consensus 163 ~~~~g~~~VlV~Ga~G~vG~~aiqlak~~--Ga~vi~~~~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~~~~~i~~~t~ 240 (364)
T 1gu7_A 163 KLTPGKDWFIQNGGTSAVGKYASQIGKLL--NFNSISVIRDRPNLDEVVASLKELGATQVITEDQNNSREFGPTIKEWIK 240 (364)
T ss_dssp CCCTTTCEEEESCTTSHHHHHHHHHHHHH--TCEEEEEECCCTTHHHHHHHHHHHTCSEEEEHHHHHCGGGHHHHHHHHH
T ss_pred ccCCCCcEEEECCCCcHHHHHHHHHHHHC--CCEEEEEecCccccHHHHHHHHhcCCeEEEecCccchHHHHHHHHHHhh
Confidence 34466 89999986 4566777788775 4688888765554222223334456432111111 222223332210
Q ss_pred CCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 190 NGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
++ ...+|+||-..... ... .+.++|+++|.++.-.
T Consensus 241 ~~-~~g~Dvvid~~G~~---~~~-~~~~~l~~~G~~v~~g 275 (364)
T 1gu7_A 241 QS-GGEAKLALNCVGGK---SST-GIARKLNNNGLMLTYG 275 (364)
T ss_dssp HH-TCCEEEEEESSCHH---HHH-HHHHTSCTTCEEEECC
T ss_pred cc-CCCceEEEECCCch---hHH-HHHHHhccCCEEEEec
Confidence 00 35799998654432 223 6679999999998744
No 383
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=92.69 E-value=0.081 Score=46.08 Aligned_cols=91 Identities=13% Similarity=0.097 Sum_probs=60.2
Q ss_pred EEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 122 RCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 122 ~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
+||-+|+ +.|..+..+++.. +++|++++.+++..+.+++ .|... .+-..+. +. . ..-..+.+|+|
T Consensus 149 ~VlV~Ga~G~vG~~aiqla~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~-~~---~-~~~~~~~~d~v 215 (324)
T 3nx4_A 149 EVVVTGASGGVGSTAVALLHKL--GYQVAAVSGRESTHGYLKS----LGANR--ILSRDEF-AE---S-RPLEKQLWAGA 215 (324)
T ss_dssp CEEESSTTSHHHHHHHHHHHHT--TCCEEEEESCGGGHHHHHH----HTCSE--EEEGGGS-SC---C-CSSCCCCEEEE
T ss_pred eEEEECCCcHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCCE--EEecCCH-HH---H-HhhcCCCccEE
Confidence 4999986 4677888888876 4699999999998888765 35332 1211111 11 1 11113579988
Q ss_pred EEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 200 FVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 200 ~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
|-.... ..++.+.+.|+++|.++.-.
T Consensus 216 ~d~~g~----~~~~~~~~~l~~~G~iv~~G 241 (324)
T 3nx4_A 216 IDTVGD----KVLAKVLAQMNYGGCVAACG 241 (324)
T ss_dssp EESSCH----HHHHHHHHTEEEEEEEEECC
T ss_pred EECCCc----HHHHHHHHHHhcCCEEEEEe
Confidence 754432 26888899999999998744
No 384
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=92.54 E-value=0.16 Score=44.84 Aligned_cols=98 Identities=12% Similarity=0.103 Sum_probs=55.9
Q ss_pred hhcCCCEEEEEcCc--cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGVY--TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~G--~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++++||-+|++ .|..+..+++... ..+|++++ +++..+.++ .|...-+. ...+..+.+... . .
T Consensus 139 ~~~~g~~VlV~Ga~G~vG~~a~qla~~~g-~~~V~~~~-~~~~~~~~~-----~ga~~~~~-~~~~~~~~~~~~---~-~ 206 (349)
T 4a27_A 139 NLREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVFGTA-STFKHEAIK-----DSVTHLFD-RNADYVQEVKRI---S-A 206 (349)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHTTST-TCEEEEEE-CGGGHHHHG-----GGSSEEEE-TTSCHHHHHHHH---C-T
T ss_pred CCCCCCEEEEEcCCcHHHHHHHHHHHHcC-CcEEEEeC-CHHHHHHHH-----cCCcEEEc-CCccHHHHHHHh---c-C
Confidence 44567899999973 4666666776654 46899888 555444443 34432112 222333333332 1 3
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+.+|+||-...... ++.+.++|++||.++.-.
T Consensus 207 ~g~Dvv~d~~g~~~----~~~~~~~l~~~G~~v~~G 238 (349)
T 4a27_A 207 EGVDIVLDCLCGDN----TGKGLSLLKPLGTYILYG 238 (349)
T ss_dssp TCEEEEEEECC-----------CTTEEEEEEEEEEC
T ss_pred CCceEEEECCCchh----HHHHHHHhhcCCEEEEEC
Confidence 57999986554322 367889999999998743
No 385
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=92.52 E-value=0.36 Score=42.84 Aligned_cols=95 Identities=15% Similarity=0.121 Sum_probs=59.1
Q ss_pred CCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 119 GAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 119 ~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
++++||-+|+|. |..+..+++.. +++|++++.+++..+.+++ ..|.. .++...-.+.+... .+.+|
T Consensus 187 ~g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~---~v~~~~~~~~~~~~-----~~~~D 253 (366)
T 1yqd_A 187 PGKHIGIVGLGGLGHVAVKFAKAF--GSKVTVISTSPSKKEEALK---NFGAD---SFLVSRDQEQMQAA-----AGTLD 253 (366)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCGGGHHHHHH---TSCCS---EEEETTCHHHHHHT-----TTCEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---hcCCc---eEEeccCHHHHHHh-----hCCCC
Confidence 678999999753 55566667665 4799999999987766553 23432 22221112233332 24799
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+||....... .++.+.+.|+++|.++.-.
T Consensus 254 ~vid~~g~~~---~~~~~~~~l~~~G~iv~~g 282 (366)
T 1yqd_A 254 GIIDTVSAVH---PLLPLFGLLKSHGKLILVG 282 (366)
T ss_dssp EEEECCSSCC---CSHHHHHHEEEEEEEEECC
T ss_pred EEEECCCcHH---HHHHHHHHHhcCCEEEEEc
Confidence 9986654321 2345677889999988743
No 386
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=92.49 E-value=0.39 Score=42.58 Aligned_cols=94 Identities=12% Similarity=0.110 Sum_probs=59.1
Q ss_pred CCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCCh---hHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 120 AQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDA---RSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 120 ~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~---~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
+++||-+|+|. |..+..+++.. +++|++++.++ +..+.+++ .|.. .+. .. +..+.+... .+.
T Consensus 181 g~~VlV~GaG~vG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~~~~----~ga~-~v~-~~-~~~~~~~~~-----~~~ 246 (366)
T 2cdc_A 181 CRKVLVVGTGPIGVLFTLLFRTY--GLEVWMANRREPTEVEQTVIEE----TKTN-YYN-SS-NGYDKLKDS-----VGK 246 (366)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHH--TCEEEEEESSCCCHHHHHHHHH----HTCE-EEE-CT-TCSHHHHHH-----HCC
T ss_pred CCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCccchHHHHHHHH----hCCc-eec-hH-HHHHHHHHh-----CCC
Confidence 78999999842 44555566654 46999999998 76666553 3432 121 11 222222221 257
Q ss_pred EEEEEEeCCccchHHHH-HHHHccCCCCcEEEEeCC
Q 023645 196 YDFAFVDAEKRMYQEYF-ELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 196 fDlI~id~~~~~~~~~l-~~~~~~Lk~gG~lv~dd~ 230 (279)
+|+||....... .+ +.+.+.|+++|.++.-..
T Consensus 247 ~d~vid~~g~~~---~~~~~~~~~l~~~G~iv~~g~ 279 (366)
T 2cdc_A 247 FDVIIDATGADV---NILGNVIPLLGRNGVLGLFGF 279 (366)
T ss_dssp EEEEEECCCCCT---HHHHHHGGGEEEEEEEEECSC
T ss_pred CCEEEECCCChH---HHHHHHHHHHhcCCEEEEEec
Confidence 999987655332 35 778899999999887543
No 387
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=92.33 E-value=1.2 Score=32.82 Aligned_cols=95 Identities=17% Similarity=0.108 Sum_probs=55.8
Q ss_pred CEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
++|+=+|+ |..+..+++.+. .+.+|+.+|.+++..+..++ ..+ +.++.+|..+. ..+... ....+|+|
T Consensus 5 m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~---~~~----~~~~~~d~~~~-~~l~~~-~~~~~d~v 73 (140)
T 1lss_A 5 MYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASA---EID----ALVINGDCTKI-KTLEDA-GIEDADMY 73 (140)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHH---HCS----SEEEESCTTSH-HHHHHT-TTTTCSEE
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHH---hcC----cEEEEcCCCCH-HHHHHc-CcccCCEE
Confidence 57888876 777777666542 24689999999876654432 112 45667776432 111111 12568999
Q ss_pred EEeCCccchHHHHHHHHccCCCCcEEE
Q 023645 200 FVDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 200 ~id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
++..+.......+..+.+.+.++-+++
T Consensus 74 i~~~~~~~~~~~~~~~~~~~~~~~ii~ 100 (140)
T 1lss_A 74 IAVTGKEEVNLMSSLLAKSYGINKTIA 100 (140)
T ss_dssp EECCSCHHHHHHHHHHHHHTTCCCEEE
T ss_pred EEeeCCchHHHHHHHHHHHcCCCEEEE
Confidence 987654433344445556677765444
No 388
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=92.10 E-value=0.77 Score=40.49 Aligned_cols=98 Identities=16% Similarity=0.201 Sum_probs=61.0
Q ss_pred hhc-CCCEEEEEcCc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QIL-GAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~-~~~~VLEiG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
... ++.+||-+|+| .|..+..+++.. +++|++++.+++..+.+++ ..|... + +-..+ .+.+... .
T Consensus 176 ~~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~~~~~~~~~~~~---~lGa~~-v-i~~~~-~~~~~~~-----~ 242 (357)
T 2cf5_A 176 GLKQPGLRGGILGLGGVGHMGVKIAKAM--GHHVTVISSSNKKREEALQ---DLGADD-Y-VIGSD-QAKMSEL-----A 242 (357)
T ss_dssp STTSTTCEEEEECCSHHHHHHHHHHHHH--TCEEEEEESSTTHHHHHHT---TSCCSC-E-EETTC-HHHHHHS-----T
T ss_pred CCCCCCCEEEEECCCHHHHHHHHHHHHC--CCeEEEEeCChHHHHHHHH---HcCCce-e-ecccc-HHHHHHh-----c
Confidence 344 67899999975 255566667665 4799999999887766552 344332 1 21112 2223322 2
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+.+|+||-...... .++.+.+.|++||.++.-.
T Consensus 243 ~g~D~vid~~g~~~---~~~~~~~~l~~~G~iv~~G 275 (357)
T 2cf5_A 243 DSLDYVIDTVPVHH---ALEPYLSLLKLDGKLILMG 275 (357)
T ss_dssp TTEEEEEECCCSCC---CSHHHHTTEEEEEEEEECS
T ss_pred CCCCEEEECCCChH---HHHHHHHHhccCCEEEEeC
Confidence 47999986554321 2456778999999998743
No 389
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=92.06 E-value=0.27 Score=43.81 Aligned_cols=97 Identities=12% Similarity=0.119 Sum_probs=59.2
Q ss_pred hcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 117 ILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 117 ~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
..++++||-+|+ |.|..+..+++.. +++|++++ +++..+.++ ..|... ++..+-.+....+.. ..
T Consensus 181 ~~~g~~VlV~Ga~G~vG~~~~qla~~~--Ga~Vi~~~-~~~~~~~~~----~lGa~~---v~~~~~~~~~~~~~~---~~ 247 (375)
T 2vn8_A 181 NCTGKRVLILGASGGVGTFAIQVMKAW--DAHVTAVC-SQDASELVR----KLGADD---VIDYKSGSVEEQLKS---LK 247 (375)
T ss_dssp TCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEE-CGGGHHHHH----HTTCSE---EEETTSSCHHHHHHT---SC
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhC--CCEEEEEe-ChHHHHHHH----HcCCCE---EEECCchHHHHHHhh---cC
Confidence 456789999993 3566777778776 47999988 666655553 345431 222111122222221 25
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.+|+||-...... ..++...+.|++||.++.-
T Consensus 248 g~D~vid~~g~~~--~~~~~~~~~l~~~G~iv~~ 279 (375)
T 2vn8_A 248 PFDFILDNVGGST--ETWAPDFLKKWSGATYVTL 279 (375)
T ss_dssp CBSEEEESSCTTH--HHHGGGGBCSSSCCEEEES
T ss_pred CCCEEEECCCChh--hhhHHHHHhhcCCcEEEEe
Confidence 7999886544321 2356778899999999873
No 390
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=91.71 E-value=0.24 Score=42.93 Aligned_cols=89 Identities=13% Similarity=0.094 Sum_probs=57.7
Q ss_pred hhcCCCEEEEEcCc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 116 QILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 116 ~~~~~~~VLEiG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
...++++||-+|+| .|..+..+++.. +++|++++ +++..+.+++ .|.. .++ .| .+ .+ ..
T Consensus 139 ~~~~g~~VlV~GaG~vG~~a~qlak~~--Ga~Vi~~~-~~~~~~~~~~----lGa~---~v~-~d-~~---~v-----~~ 198 (315)
T 3goh_A 139 PLTKQREVLIVGFGAVNNLLTQMLNNA--GYVVDLVS-ASLSQALAAK----RGVR---HLY-RE-PS---QV-----TQ 198 (315)
T ss_dssp CCCSCCEEEEECCSHHHHHHHHHHHHH--TCEEEEEC-SSCCHHHHHH----HTEE---EEE-SS-GG---GC-----CS
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEE-ChhhHHHHHH----cCCC---EEE-cC-HH---Hh-----CC
Confidence 34567899999985 366777788776 46999999 8888877765 3432 222 23 21 11 36
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.+|+||-..... .+..+.+.|++||.++.-
T Consensus 199 g~Dvv~d~~g~~----~~~~~~~~l~~~G~~v~~ 228 (315)
T 3goh_A 199 KYFAIFDAVNSQ----NAAALVPSLKANGHIICI 228 (315)
T ss_dssp CEEEEECC-----------TTGGGEEEEEEEEEE
T ss_pred CccEEEECCCch----hHHHHHHHhcCCCEEEEE
Confidence 899988443322 235678999999998874
No 391
>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A
Probab=91.62 E-value=0.52 Score=41.90 Aligned_cols=97 Identities=14% Similarity=0.141 Sum_probs=56.3
Q ss_pred cCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 118 LGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 118 ~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
.++++|+-+|+|. |..+..++... +++|+.+|.+++..+.+++.... .+.....+..+....+ ..+
T Consensus 165 l~~~~VlViGaGgvG~~aa~~a~~~--Ga~V~v~dr~~~r~~~~~~~~~~-----~~~~~~~~~~~~~~~~------~~~ 231 (361)
T 1pjc_A 165 VKPGKVVILGGGVVGTEAAKMAVGL--GAQVQIFDINVERLSYLETLFGS-----RVELLYSNSAEIETAV------AEA 231 (361)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHGG-----GSEEEECCHHHHHHHH------HTC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhhCc-----eeEeeeCCHHHHHHHH------cCC
Confidence 3568999999852 33344445555 36999999999888777665431 2323322322222222 368
Q ss_pred EEEEEeCCccc--hHH-HHHHHHccCCCCcEEEE
Q 023645 197 DFAFVDAEKRM--YQE-YFELLLQLIRVGGIIVI 227 (279)
Q Consensus 197 DlI~id~~~~~--~~~-~l~~~~~~Lk~gG~lv~ 227 (279)
|+|+....... .+. ..+...+.+++||+++-
T Consensus 232 DvVI~~~~~~~~~~~~li~~~~~~~~~~g~~ivd 265 (361)
T 1pjc_A 232 DLLIGAVLVPGRRAPILVPASLVEQMRTGSVIVD 265 (361)
T ss_dssp SEEEECCCCTTSSCCCCBCHHHHTTSCTTCEEEE
T ss_pred CEEEECCCcCCCCCCeecCHHHHhhCCCCCEEEE
Confidence 99976543221 001 13456688999997764
No 392
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=91.49 E-value=1.1 Score=41.17 Aligned_cols=103 Identities=15% Similarity=0.152 Sum_probs=61.8
Q ss_pred CEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHH------------HHhCCCCcEEEEEcChhhHHHHH
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYY------------ERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~------------~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
++|.-||+ |+.+..++..+.. +.+|+++|.+++.++..++.. +..-...++++. .|..+.
T Consensus 3 mkI~VIG~--G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea---- 75 (450)
T 3gg2_A 3 LDIAVVGI--GYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQA---- 75 (450)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHH----
T ss_pred CEEEEECc--CHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHH----
Confidence 46777877 6666666655432 468999999998876655411 000001223332 222221
Q ss_pred HhCCCCCcEEEEEEeCCcc----------chHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 188 ILNGEASSYDFAFVDAEKR----------MYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~~~----------~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
-...|+||+..+.. .....++.+.+.|++|.+++......+|.
T Consensus 76 -----~~~aDvViiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt 128 (450)
T 3gg2_A 76 -----VPEADIIFIAVGTPAGEDGSADMSYVLDAARSIGRAMSRYILIVTKSTVPVGS 128 (450)
T ss_dssp -----GGGCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTTH
T ss_pred -----HhcCCEEEEEcCCCcccCCCcChHHHHHHHHHHHhhCCCCCEEEEeeeCCCcc
Confidence 14578998865433 56677888889999988777665544443
No 393
>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*
Probab=91.48 E-value=0.44 Score=42.72 Aligned_cols=98 Identities=13% Similarity=0.144 Sum_probs=55.8
Q ss_pred cCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 118 LGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 118 ~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..+++|+-+|+|. |.....++..+ +.+|+++|.+++..+.+++.+ |.. +.....+..+ +.... ...
T Consensus 166 l~g~~V~ViG~G~iG~~~a~~a~~~--Ga~V~~~d~~~~~l~~~~~~~---g~~--~~~~~~~~~~-l~~~l-----~~a 232 (377)
T 2vhw_A 166 VEPADVVVIGAGTAGYNAARIANGM--GATVTVLDINIDKLRQLDAEF---CGR--IHTRYSSAYE-LEGAV-----KRA 232 (377)
T ss_dssp BCCCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHT---TTS--SEEEECCHHH-HHHHH-----HHC
T ss_pred CCCCEEEEECCCHHHHHHHHHHHhC--CCEEEEEeCCHHHHHHHHHhc---CCe--eEeccCCHHH-HHHHH-----cCC
Confidence 4678999999842 33333344444 469999999998776665433 221 2222222222 22221 467
Q ss_pred EEEEEeCCccc--h-HHHHHHHHccCCCCcEEEEe
Q 023645 197 DFAFVDAEKRM--Y-QEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 197 DlI~id~~~~~--~-~~~l~~~~~~Lk~gG~lv~d 228 (279)
|+|+....... . .-+.+...+.++|||+|+--
T Consensus 233 DvVi~~~~~p~~~t~~li~~~~l~~mk~g~~iV~v 267 (377)
T 2vhw_A 233 DLVIGAVLVPGAKAPKLVSNSLVAHMKPGAVLVDI 267 (377)
T ss_dssp SEEEECCCCTTSCCCCCBCHHHHTTSCTTCEEEEG
T ss_pred CEEEECCCcCCCCCcceecHHHHhcCCCCcEEEEE
Confidence 99987432111 1 11135667889999988753
No 394
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=91.48 E-value=1.1 Score=38.22 Aligned_cols=144 Identities=22% Similarity=0.261 Sum_probs=80.7
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--H----HHHH
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--L----KALI 188 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l----~~~~ 188 (279)
+..+++.+|--|.+.| ++..+++.+. .+++|+.+|.+++.++.+.+.+ + .++..+.+|..+. . ....
T Consensus 25 ~rL~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~---g--~~~~~~~~Dv~~~~~v~~~~~~~~ 98 (273)
T 4fgs_A 25 QRLNAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAEI---G--GGAVGIQADSANLAELDRLYEKVK 98 (273)
T ss_dssp CTTTTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C--TTCEEEECCTTCHHHHHHHHHHHH
T ss_pred chhCCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHc---C--CCeEEEEecCCCHHHHHHHHHHHH
Confidence 3467888998887655 5666665542 3679999999998776554433 3 3467888887542 1 2221
Q ss_pred hCCCCCcEEEEEEeCCc-----------cch-----------HHHHHHHHccCCCCcEEEEeCCCCCCcccCcccCCh--
Q 023645 189 LNGEASSYDFAFVDAEK-----------RMY-----------QEYFELLLQLIRVGGIIVIDNVLWHGKVADQMVNDA-- 244 (279)
Q Consensus 189 ~~~~~~~fDlI~id~~~-----------~~~-----------~~~l~~~~~~Lk~gG~lv~dd~~~~g~~~~~~~~~~-- 244 (279)
+. -++.|+++.++.. +++ ....+.+.+.++++|.||.-.- ..|....+.....
T Consensus 99 ~~--~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS-~~~~~~~~~~~~Y~a 175 (273)
T 4fgs_A 99 AE--AGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGS-TAGSTGTPAFSVYAA 175 (273)
T ss_dssp HH--HSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECC-GGGGSCCTTCHHHHH
T ss_pred HH--cCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEee-hhhccCCCCchHHHH
Confidence 11 2689999876531 111 1123444578888887665322 2233222222111
Q ss_pred hhHHHHHHHHHhhh---CCCeEE-EEee
Q 023645 245 KTISIRNFNKNLME---DERVSI-SMVP 268 (279)
Q Consensus 245 ~~~~~~~~~~~l~~---~~~~~~-~~lp 268 (279)
..-++..|.+.+.. ..++.+ ++.|
T Consensus 176 sKaav~~ltr~lA~Ela~~gIrVN~V~P 203 (273)
T 4fgs_A 176 SKAALRSFARNWILDLKDRGIRINTLSP 203 (273)
T ss_dssp HHHHHHHHHHHHHHHTTTSCEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcccCeEEEEEee
Confidence 12257777776632 344554 3444
No 395
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=91.45 E-value=2.8 Score=36.33 Aligned_cols=89 Identities=11% Similarity=0.019 Sum_probs=55.4
Q ss_pred CEEEEEcCccCHHHHHHHHHCCC-C-CEEEEEeCChh---HHHHHHHHHHHhCCCCcEEEEEc-ChhhHHHHHHhCCCCC
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPE-S-GCLVACERDAR---SLEVAKKYYERAGVSHKVKIKHG-LAADSLKALILNGEAS 194 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~-~-~~v~~iD~s~~---~~~~a~~~~~~~g~~~~v~~~~g-d~~~~l~~~~~~~~~~ 194 (279)
++|--||+ |..+..++..+.. + .+|+++|.+++ ..+...+.+...|. .. +..+.. .
T Consensus 25 m~IgvIG~--G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~-------~~~s~~e~~---------~ 86 (317)
T 4ezb_A 25 TTIAFIGF--GEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV-------EPLDDVAGI---------A 86 (317)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC-------EEESSGGGG---------G
T ss_pred CeEEEECc--cHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC-------CCCCHHHHH---------h
Confidence 57888887 6666666655432 4 58999999973 22222222333342 22 333221 4
Q ss_pred cEEEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 195 SYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
.-|+||+..+.....+.++.+.+.+++|.+++-
T Consensus 87 ~aDvVi~avp~~~~~~~~~~i~~~l~~~~ivv~ 119 (317)
T 4ezb_A 87 CADVVLSLVVGAATKAVAASAAPHLSDEAVFID 119 (317)
T ss_dssp GCSEEEECCCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred cCCEEEEecCCHHHHHHHHHHHhhcCCCCEEEE
Confidence 569999887766666667888888998876654
No 396
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.02 E-value=1.1 Score=33.41 Aligned_cols=92 Identities=10% Similarity=0.181 Sum_probs=55.1
Q ss_pred CEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCcEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYD 197 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~fD 197 (279)
++|+-+|+ |..+..+++.+. .+.+|+++|.+++.++.+++ .+ +.++.+|..+. +... ....+|
T Consensus 7 ~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~----~~~~~gd~~~~~~l~~~----~~~~~d 72 (141)
T 3llv_A 7 YEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG----FDAVIADPTDESFYRSL----DLEGVS 72 (141)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT----CEEEECCTTCHHHHHHS----CCTTCS
T ss_pred CEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC----CcEEECCCCCHHHHHhC----CcccCC
Confidence 46888887 667777766553 25689999999987665543 22 57788888653 2222 135789
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+|++..+............+.+. ...++.
T Consensus 73 ~vi~~~~~~~~n~~~~~~a~~~~-~~~iia 101 (141)
T 3llv_A 73 AVLITGSDDEFNLKILKALRSVS-DVYAIV 101 (141)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHC-CCCEEE
T ss_pred EEEEecCCHHHHHHHHHHHHHhC-CceEEE
Confidence 99886653322222333334444 444443
No 397
>3pid_A UDP-glucose 6-dehydrogenase; rossmann fold, oxidoreductase; 1.40A {Klebsiella pneumoniae} PDB: 3pln_A* 3pjg_A* 3phl_A* 3plr_A*
Probab=90.99 E-value=1.6 Score=39.91 Aligned_cols=105 Identities=10% Similarity=0.165 Sum_probs=63.1
Q ss_pred hhcCCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHH------------HHHhCCCCcEEEEEcChhhH
Q 023645 116 QILGAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKY------------YERAGVSHKVKIKHGLAADS 183 (279)
Q Consensus 116 ~~~~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~------------~~~~g~~~~v~~~~gd~~~~ 183 (279)
+...-++|--||+ |+.+..++..+..+.+|+++|.+++.++..++. +.. + ..++++. .|..+.
T Consensus 32 r~~~~mkIaVIGl--G~mG~~lA~~La~G~~V~~~D~~~~~v~~l~~g~~~i~e~~l~~ll~~-~-~~~l~~t-td~~ea 106 (432)
T 3pid_A 32 RGSEFMKITISGT--GYVGLSNGVLIAQNHEVVALDIVQAKVDMLNQKISPIVDKEIQEYLAE-K-PLNFRAT-TDKHDA 106 (432)
T ss_dssp ---CCCEEEEECC--SHHHHHHHHHHHTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S-CCCEEEE-SCHHHH
T ss_pred cccCCCEEEEECc--CHHHHHHHHHHHcCCeEEEEecCHHHhhHHhccCCccccccHHHHHhh-c-cCCeEEE-cCHHHH
Confidence 3344568888877 666666665554457999999999988766541 111 1 1123332 232222
Q ss_pred HHHHHhCCCCCcEEEEEEeCCcc-----------chHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 184 LKALILNGEASSYDFAFVDAEKR-----------MYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 184 l~~~~~~~~~~~fDlI~id~~~~-----------~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
+ ...|+||+..+.. ......+.+.+ |+||.++|......+|.
T Consensus 107 ~---------~~aDvViiaVPt~~~~~~~~~Dl~~V~~v~~~i~~-l~~g~iVV~~STv~pgt 159 (432)
T 3pid_A 107 Y---------RNADYVIIATPTDYDPKTNYFNTSTVEAVIRDVTE-INPNAVMIIKSTIPVGF 159 (432)
T ss_dssp H---------TTCSEEEECCCCEEETTTTEEECHHHHHHHHHHHH-HCTTSEEEECSCCCTTH
T ss_pred H---------hCCCEEEEeCCCccccccccccHHHHHHHHHHHHh-cCCCcEEEEeCCCChHH
Confidence 1 4568888764422 24556677778 99998888776666664
No 398
>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}
Probab=90.91 E-value=0.81 Score=40.74 Aligned_cols=99 Identities=14% Similarity=0.140 Sum_probs=56.5
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..+++|+-+|+ |..+..+++.+ ..+.+|+++|.+++..+.+++.+ +. .+.....+.. .+.... ..+
T Consensus 164 l~~~~V~ViGa--G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~---g~--~~~~~~~~~~-~l~~~~-----~~~ 230 (369)
T 2eez_A 164 VAPASVVILGG--GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVF---GG--RVITLTATEA-NIKKSV-----QHA 230 (369)
T ss_dssp BCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHT---TT--SEEEEECCHH-HHHHHH-----HHC
T ss_pred CCCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhc---Cc--eEEEecCCHH-HHHHHH-----hCC
Confidence 45789999998 45554444332 12469999999998766654422 32 2333323332 222221 468
Q ss_pred EEEEEeCCccc--hHH-HHHHHHccCCCCcEEEEeC
Q 023645 197 DFAFVDAEKRM--YQE-YFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 197 DlI~id~~~~~--~~~-~l~~~~~~Lk~gG~lv~dd 229 (279)
|+|+....... ... ..+...+.+++||+++.-.
T Consensus 231 DvVi~~~g~~~~~~~~li~~~~l~~mk~gg~iV~v~ 266 (369)
T 2eez_A 231 DLLIGAVLVPGAKAPKLVTRDMLSLMKEGAVIVDVA 266 (369)
T ss_dssp SEEEECCC-------CCSCHHHHTTSCTTCEEEECC
T ss_pred CEEEECCCCCccccchhHHHHHHHhhcCCCEEEEEe
Confidence 99987654321 111 2456778899999877543
No 399
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=90.74 E-value=1.2 Score=37.05 Aligned_cols=83 Identities=23% Similarity=0.121 Sum_probs=54.0
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC--CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP--ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~--~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
..++||-.| |+|..+..+++.+. .+.+|+.++.+++..+...+.+...+ .++.++.+|..+. +..+.++- .
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dl~~~~~~~~~~~~~~~~ 79 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG--LSPRFHQLDIDDLQSIRALRDFLRKE 79 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT--CCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC--CeeEEEECCCCCHHHHHHHHHHHHHh
Confidence 356788777 66778888877653 25799999999877766666665544 3578889998642 22221100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+.+|+||..+.
T Consensus 80 ~g~id~li~~Ag 91 (276)
T 1wma_A 80 YGGLDVLVNNAG 91 (276)
T ss_dssp HSSEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 147999987653
No 400
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=90.73 E-value=2 Score=30.51 Aligned_cols=80 Identities=23% Similarity=0.159 Sum_probs=50.2
Q ss_pred CCEEEEEcCccCHHHHHHHHHCC-CC-CEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh--HHHHHHhCCCCCc
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLP-ES-GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD--SLKALILNGEASS 195 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~-~~-~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~--~l~~~~~~~~~~~ 195 (279)
.++|+-+|+ |..+..+++.+. .+ .+|+.+|.+++..+... . ..+.++.+|..+ .+... -..
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~----~~~~~~~~d~~~~~~~~~~-----~~~ 69 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----R----MGVATKQVDAKDEAGLAKA-----LGG 69 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----T----TTCEEEECCTTCHHHHHHH-----TTT
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----h----CCCcEEEecCCCHHHHHHH-----HcC
Confidence 358999998 777776665542 23 58999999987665443 1 235677777754 23333 257
Q ss_pred EEEEEEeCCccchHHHHHH
Q 023645 196 YDFAFVDAEKRMYQEYFEL 214 (279)
Q Consensus 196 fDlI~id~~~~~~~~~l~~ 214 (279)
+|+||...+........+.
T Consensus 70 ~d~vi~~~~~~~~~~~~~~ 88 (118)
T 3ic5_A 70 FDAVISAAPFFLTPIIAKA 88 (118)
T ss_dssp CSEEEECSCGGGHHHHHHH
T ss_pred CCEEEECCCchhhHHHHHH
Confidence 8999987765444343333
No 401
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=90.72 E-value=1.1 Score=35.18 Aligned_cols=97 Identities=12% Similarity=0.049 Sum_probs=56.4
Q ss_pred CCEEEEEcCccCHHHHHHHHHCC-C-CCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLP-E-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYD 197 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~-~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fD 197 (279)
..+|+=+|+ |..+..+++.+. . +.+|+++|.+++..+.+++ .| +.++.+|..+. ..+..-.+-..+|
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~~----~g----~~~~~gd~~~~-~~l~~~~~~~~ad 107 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHRS----EG----RNVISGDATDP-DFWERILDTGHVK 107 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHHH----TT----CCEEECCTTCH-HHHHTBCSCCCCC
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHHH----CC----CCEEEcCCCCH-HHHHhccCCCCCC
Confidence 447888876 677777666553 2 4589999999987655432 23 45667776532 1111110135689
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+|++..+........-...+.+.|++.++.
T Consensus 108 ~vi~~~~~~~~~~~~~~~~~~~~~~~~ii~ 137 (183)
T 3c85_A 108 LVLLAMPHHQGNQTALEQLQRRNYKGQIAA 137 (183)
T ss_dssp EEEECCSSHHHHHHHHHHHHHTTCCSEEEE
T ss_pred EEEEeCCChHHHHHHHHHHHHHCCCCEEEE
Confidence 998855433222223334455677777776
No 402
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=90.53 E-value=2.4 Score=35.36 Aligned_cols=83 Identities=16% Similarity=0.140 Sum_probs=53.7
Q ss_pred cCCCEEEEEcCccC-HHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--H----HHHHh
Q 023645 118 LGAQRCIEVGVYTG-YSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--L----KALIL 189 (279)
Q Consensus 118 ~~~~~VLEiG~G~G-~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l----~~~~~ 189 (279)
..++++|--|.+.+ .++..+++.+. .+++|+.++.+++..+.+.+.+++.+- .++.++.+|..+. . ....+
T Consensus 4 l~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (256)
T 4fs3_A 4 LENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQ-PEAHLYQIDVQSDEEVINGFEQIGK 82 (256)
T ss_dssp CTTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTC-SSCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-CcEEEEEccCCCHHHHHHHHHHHHH
Confidence 45788999886431 24444444332 367999999999888888877776553 2478888887542 1 11111
Q ss_pred CCCCCcEEEEEEeC
Q 023645 190 NGEASSYDFAFVDA 203 (279)
Q Consensus 190 ~~~~~~fDlI~id~ 203 (279)
. -+..|.++.++
T Consensus 83 ~--~G~iD~lvnnA 94 (256)
T 4fs3_A 83 D--VGNIDGVYHSI 94 (256)
T ss_dssp H--HCCCSEEEECC
T ss_pred H--hCCCCEEEecc
Confidence 1 26899888764
No 403
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=90.51 E-value=1.7 Score=36.18 Aligned_cols=81 Identities=15% Similarity=0.156 Sum_probs=51.8
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
..++++|-.|++ |..+..+++.+. .+.+|+.++.+++.++...+.+ ..++.++.+|..+. ...+.+.- .
T Consensus 6 l~gk~~lVTGas-~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~-----~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 79 (255)
T 4eso_A 6 YQGKKAIVIGGT-HGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF-----GPRVHALRSDIADLNEIAVLGAAAGQT 79 (255)
T ss_dssp TTTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH-----GGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-----CCcceEEEccCCCHHHHHHHHHHHHHH
Confidence 456789988855 556666666542 3679999999988766555443 23688999998652 11111100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+.+|+++.++.
T Consensus 80 ~g~id~lv~nAg 91 (255)
T 4eso_A 80 LGAIDLLHINAG 91 (255)
T ss_dssp HSSEEEEEECCC
T ss_pred hCCCCEEEECCC
Confidence 258999987653
No 404
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=90.50 E-value=0.61 Score=43.26 Aligned_cols=58 Identities=14% Similarity=0.087 Sum_probs=42.7
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCCC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHH
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPESG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSL 184 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l 184 (279)
.+++|+.||.|..++-+.++ +. .|.++|+++.+.+.-+.|+. ......++.+|+.+..
T Consensus 89 ~~viDLFaG~GGlslG~~~a---G~~~v~avE~d~~A~~ty~~N~~---~~p~~~~~~~DI~~i~ 147 (482)
T 3me5_A 89 FRFIDLFAGIGGIRRGFESI---GGQCVFTSEWNKHAVRTYKANHY---CDPATHHFNEDIRDIT 147 (482)
T ss_dssp EEEEEESCTTSHHHHHHHTT---TEEEEEEECCCHHHHHHHHHHSC---CCTTTCEEESCTHHHH
T ss_pred ceEEEecCCccHHHHHHHHC---CCEEEEEEeCCHHHHHHHHHhcc---cCCCcceeccchhhhh
Confidence 48999999999999888764 33 48899999988777666652 1112456778887654
No 405
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=90.36 E-value=0.43 Score=43.62 Aligned_cols=49 Identities=16% Similarity=0.166 Sum_probs=39.0
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC----CCCEEEEEeCChhHHHHHHHHHHH
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP----ESGCLVACERDARSLEVAKKYYER 166 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~----~~~~v~~iD~s~~~~~~a~~~~~~ 166 (279)
..+-+|+|+|.|+|....-+++.+. ...+++.||+|+...+.-++.+..
T Consensus 136 ~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 188 (432)
T 4f3n_A 136 SGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRETLGA 188 (432)
T ss_dssp HTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHHHHHH
T ss_pred cCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHHHHhc
Confidence 3467999999999999888876542 124899999999998887877764
No 406
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=90.32 E-value=3.3 Score=34.41 Aligned_cols=85 Identities=9% Similarity=-0.027 Sum_probs=51.6
Q ss_pred CCCEEEEEcCccC-HHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 119 GAQRCIEVGVYTG-YSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 119 ~~~~VLEiG~G~G-~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
.++++|-.|++.| ..+..+++.+ ..+.+|+.++.++...+.+++..+..+- .++.++.+|..+. +..+.++- .
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~ 84 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDR-NDSIILPCDVTNDAEIETCFASIKEQ 84 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSS-CCCEEEECCCSSSHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCC-CCceEEeCCCCCHHHHHHHHHHHHHH
Confidence 4678999986622 2444444443 2367999999988777776666665443 2588999988642 22211100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+.+|.++..+.
T Consensus 85 ~g~id~li~~Ag 96 (266)
T 3oig_A 85 VGVIHGIAHCIA 96 (266)
T ss_dssp HSCCCEEEECCC
T ss_pred hCCeeEEEEccc
Confidence 257899887653
No 407
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=90.31 E-value=0.81 Score=39.83 Aligned_cols=89 Identities=19% Similarity=0.215 Sum_probs=57.2
Q ss_pred CEEEEEcCccCHHHHHHHHHCCC-CC--EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh-HHHHHHhCCCCCcE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPE-SG--CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD-SLKALILNGEASSY 196 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~-~~--~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~-~l~~~~~~~~~~~f 196 (279)
++|.=||+| ..+..++..+.. +. +|+++|.+++..+.+++ .|..+ . ...+..+ . -...
T Consensus 34 ~kI~IIG~G--~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~----~G~~~--~-~~~~~~~~~---------~~~a 95 (314)
T 3ggo_A 34 QNVLIVGVG--FMGGSFAKSLRRSGFKGKIYGYDINPESISKAVD----LGIID--E-GTTSIAKVE---------DFSP 95 (314)
T ss_dssp SEEEEESCS--HHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHH----TTSCS--E-EESCTTGGG---------GGCC
T ss_pred CEEEEEeeC--HHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHH----CCCcc--h-hcCCHHHHh---------hccC
Confidence 589999874 455444443321 33 89999999987766543 34322 1 1223322 1 2457
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
|+||+..+.....+.++.+.+.+++|.++ +|
T Consensus 96 DvVilavp~~~~~~vl~~l~~~l~~~~iv-~d 126 (314)
T 3ggo_A 96 DFVMLSSPVRTFREIAKKLSYILSEDATV-TD 126 (314)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHSCTTCEE-EE
T ss_pred CEEEEeCCHHHHHHHHHHHhhccCCCcEE-EE
Confidence 99999887777778888888889888654 44
No 408
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=90.16 E-value=2.8 Score=34.22 Aligned_cols=94 Identities=18% Similarity=0.134 Sum_probs=61.0
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCcEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYD 197 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~fD 197 (279)
.++|+=+|+ |..+..+++.+...+.|+.+|.+++.++.++ . .+.++.+|+.+. +... .-...|
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~-----~----~~~~i~gd~~~~~~l~~a----~i~~ad 73 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR-----S----GANFVHGDPTRVSDLEKA----NVRGAR 73 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH-----T----TCEEEESCTTCHHHHHHT----TCTTCS
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh-----c----CCeEEEcCCCCHHHHHhc----Ccchhc
Confidence 457888876 7888889888764333999999998765443 1 268899998642 3221 135789
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.|++..+............+.+.|+..++..
T Consensus 74 ~vi~~~~~d~~n~~~~~~a~~~~~~~~iia~ 104 (234)
T 2aef_A 74 AVIVDLESDSETIHCILGIRKIDESVRIIAE 104 (234)
T ss_dssp EEEECCSCHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred EEEEcCCCcHHHHHHHHHHHHHCCCCeEEEE
Confidence 9888655443333444455667787666653
No 409
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=90.10 E-value=0.85 Score=39.48 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=59.6
Q ss_pred HHhhcCCCEEEEEc-Cc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCC
Q 023645 114 LVQILGAQRCIEVG-VY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNG 191 (279)
Q Consensus 114 l~~~~~~~~VLEiG-~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~ 191 (279)
.....++++||-+| +| .|..+..+++.. +++|++++ +++..+.++ +.|... ++..+-.+.....
T Consensus 147 ~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~--Ga~vi~~~-~~~~~~~~~----~lGa~~---~i~~~~~~~~~~~---- 212 (321)
T 3tqh_A 147 QAEVKQGDVVLIHAGAGGVGHLAIQLAKQK--GTTVITTA-SKRNHAFLK----ALGAEQ---CINYHEEDFLLAI---- 212 (321)
T ss_dssp HTTCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEE-CHHHHHHHH----HHTCSE---EEETTTSCHHHHC----
T ss_pred hcCCCCCCEEEEEcCCcHHHHHHHHHHHHc--CCEEEEEe-ccchHHHHH----HcCCCE---EEeCCCcchhhhh----
Confidence 34556788999986 44 577777888876 46899887 444444443 456532 2222211212211
Q ss_pred CCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 192 EASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 192 ~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
-..+|+||-.... ..++.+.+.|++||.++.-
T Consensus 213 -~~g~D~v~d~~g~----~~~~~~~~~l~~~G~iv~~ 244 (321)
T 3tqh_A 213 -STPVDAVIDLVGG----DVGIQSIDCLKETGCIVSV 244 (321)
T ss_dssp -CSCEEEEEESSCH----HHHHHHGGGEEEEEEEEEC
T ss_pred -ccCCCEEEECCCc----HHHHHHHHhccCCCEEEEe
Confidence 2579998865443 2237788999999999874
No 410
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=90.03 E-value=3.4 Score=34.68 Aligned_cols=108 Identities=18% Similarity=0.167 Sum_probs=64.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCC------------hhHHHHHHHHHHHhCCCCcEEEEEcChhhH-
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERD------------ARSLEVAKKYYERAGVSHKVKIKHGLAADS- 183 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s------------~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~- 183 (279)
..+++||-.|++ |.++..+++.+. .+.+|+.+|.+ .+..+.+...++..+ .++.++.+|..+.
T Consensus 8 l~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~ 84 (287)
T 3pxx_A 8 VQDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTG--RKAYTAEVDVRDRA 84 (287)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTT--SCEEEEECCTTCHH
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcC--CceEEEEccCCCHH
Confidence 346789988865 556666666542 35799999987 555555555555544 4689999998652
Q ss_pred -HHHHHhCC--CCCcEEEEEEeCCc---------cch-----------HHHHHHHHccCCCCcEEEEe
Q 023645 184 -LKALILNG--EASSYDFAFVDAEK---------RMY-----------QEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 184 -l~~~~~~~--~~~~fDlI~id~~~---------~~~-----------~~~l~~~~~~Lk~gG~lv~d 228 (279)
+..+.++- .-+.+|+++.++.. +.+ ....+.+.+.++++|.||.-
T Consensus 85 ~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~i 152 (287)
T 3pxx_A 85 AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITT 152 (287)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEe
Confidence 11111100 02578999877541 111 12344556777888877753
No 411
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=89.98 E-value=0.61 Score=40.96 Aligned_cols=97 Identities=10% Similarity=0.041 Sum_probs=57.1
Q ss_pred CEEEEE-cCc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 121 QRCIEV-GVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 121 ~~VLEi-G~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
++||=. |+| .|..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+..... ...+|+
T Consensus 166 ~~vli~gg~g~vG~~a~qla~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~~~~~~~~~~~~~v~~~~~---~~g~D~ 236 (349)
T 3pi7_A 166 KAFVMTAGASQLCKLIIGLAKEE--GFRPIVTVRRDEQIALLKD----IGAAHVLNEKAPDFEATLREVMK---AEQPRI 236 (349)
T ss_dssp SEEEESSTTSHHHHHHHHHHHHH--TCEEEEEESCGGGHHHHHH----HTCSEEEETTSTTHHHHHHHHHH---HHCCCE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCCEEEECCcHHHHHHHHHHhc---CCCCcE
Confidence 566654 332 345555566665 4799999999998887764 34332111111233333332211 246999
Q ss_pred EEEeCCccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 199 AFVDAEKRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 199 I~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
||-..... .++.+.+.|++||.++.-..
T Consensus 237 vid~~g~~----~~~~~~~~l~~~G~iv~~G~ 264 (349)
T 3pi7_A 237 FLDAVTGP----LASAIFNAMPKRARWIIYGR 264 (349)
T ss_dssp EEESSCHH----HHHHHHHHSCTTCEEEECCC
T ss_pred EEECCCCh----hHHHHHhhhcCCCEEEEEec
Confidence 88655432 34678899999999998543
No 412
>4e21_A 6-phosphogluconate dehydrogenase (decarboxylating; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.30A {Geobacter metallireducens}
Probab=89.81 E-value=2.6 Score=37.37 Aligned_cols=91 Identities=8% Similarity=0.102 Sum_probs=58.3
Q ss_pred CCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDF 198 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDl 198 (279)
.++|.=||+ |..+..++..+. .+.+|+++|.+++..+.+.+ .|. .. ..+..+.... ....|+
T Consensus 22 ~mkIgiIGl--G~mG~~~A~~L~~~G~~V~v~dr~~~~~~~l~~----~g~----~~-~~s~~e~~~~------a~~~Dv 84 (358)
T 4e21_A 22 SMQIGMIGL--GRMGADMVRRLRKGGHECVVYDLNVNAVQALER----EGI----AG-ARSIEEFCAK------LVKPRV 84 (358)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHT----TTC----BC-CSSHHHHHHH------SCSSCE
T ss_pred CCEEEEECc--hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHH----CCC----EE-eCCHHHHHhc------CCCCCE
Confidence 468888887 556666555442 24689999999987654432 232 11 2233333332 245699
Q ss_pred EEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 199 AFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 199 I~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
||+..+.......++.+.+.|++|.+|+-
T Consensus 85 Vi~~vp~~~v~~vl~~l~~~l~~g~iiId 113 (358)
T 4e21_A 85 VWLMVPAAVVDSMLQRMTPLLAANDIVID 113 (358)
T ss_dssp EEECSCGGGHHHHHHHHGGGCCTTCEEEE
T ss_pred EEEeCCHHHHHHHHHHHHhhCCCCCEEEe
Confidence 99877655777888888899998766553
No 413
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=89.59 E-value=1.9 Score=32.71 Aligned_cols=96 Identities=11% Similarity=0.089 Sum_probs=58.6
Q ss_pred CEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCCh-hHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCcE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDA-RSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSY 196 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~-~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~f 196 (279)
++|+=+|+ |..+..+++.+. .+.+|+.+|.++ +..+..++... ..+.++.||..+. +... .-...
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~-----~~~~~i~gd~~~~~~l~~a----~i~~a 72 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLG-----DNADVIPGDSNDSSVLKKA----GIDRC 72 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHC-----TTCEEEESCTTSHHHHHHH----TTTTC
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhc-----CCCeEEEcCCCCHHHHHHc----ChhhC
Confidence 46777775 788877776653 246899999974 44433333221 2378899998642 3222 13578
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
|+|++..+............+.+.|...++.
T Consensus 73 d~vi~~~~~d~~n~~~~~~a~~~~~~~~ii~ 103 (153)
T 1id1_A 73 RAILALSDNDADNAFVVLSAKDMSSDVKTVL 103 (153)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHHTSSSCEEE
T ss_pred CEEEEecCChHHHHHHHHHHHHHCCCCEEEE
Confidence 9998876544444444555566666666665
No 414
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=89.49 E-value=1.2 Score=34.05 Aligned_cols=99 Identities=11% Similarity=0.065 Sum_probs=56.7
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
...++|+=+|+ |..+..+++.+. .+.+|+.+|.+++..+.+++ . ..+.++.+|..+. ..+... ....+
T Consensus 17 ~~~~~v~IiG~--G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~---~----~g~~~~~~d~~~~-~~l~~~-~~~~a 85 (155)
T 2g1u_A 17 QKSKYIVIFGC--GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNS---E----FSGFTVVGDAAEF-ETLKEC-GMEKA 85 (155)
T ss_dssp CCCCEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCT---T----CCSEEEESCTTSH-HHHHTT-TGGGC
T ss_pred cCCCcEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHh---c----CCCcEEEecCCCH-HHHHHc-CcccC
Confidence 45678999987 666666655442 24689999999876543321 1 1245666776432 112111 12468
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
|+|++.............+.+.+.+...++.
T Consensus 86 d~Vi~~~~~~~~~~~~~~~~~~~~~~~~iv~ 116 (155)
T 2g1u_A 86 DMVFAFTNDDSTNFFISMNARYMFNVENVIA 116 (155)
T ss_dssp SEEEECSSCHHHHHHHHHHHHHTSCCSEEEE
T ss_pred CEEEEEeCCcHHHHHHHHHHHHHCCCCeEEE
Confidence 9999876544443444444555555556655
No 415
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=89.40 E-value=1.2 Score=39.24 Aligned_cols=102 Identities=15% Similarity=0.167 Sum_probs=60.1
Q ss_pred HhhcCCCEEEEEcCc-cCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcC-hhhHHHHHHhCCC
Q 023645 115 VQILGAQRCIEVGVY-TGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGL-AADSLKALILNGE 192 (279)
Q Consensus 115 ~~~~~~~~VLEiG~G-~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd-~~~~l~~~~~~~~ 192 (279)
....++++||-+|+| .|..+..+++..+ +++|+++|.+++..+.+++ .|... .+-..+ ..+.+..+. .
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~-Ga~Vi~~~~~~~~~~~~~~----lGa~~--vi~~~~~~~~~v~~~~---~ 251 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMT-PATVIALDVKEEKLKLAER----LGADH--VVDARRDPVKQVMELT---R 251 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESSHHHHHHHHH----TTCSE--EEETTSCHHHHHHHHT---T
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEEeCCHHHHHHHHH----hCCCE--EEeccchHHHHHHHHh---C
Confidence 445677899999985 2445556666652 4699999999988777753 45322 111111 222233321 1
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
...+|+||-...... ...++.+.+. +||.++.-.
T Consensus 252 g~g~Dvvid~~G~~~-~~~~~~~~~~--~~G~~v~~g 285 (359)
T 1h2b_A 252 GRGVNVAMDFVGSQA-TVDYTPYLLG--RMGRLIIVG 285 (359)
T ss_dssp TCCEEEEEESSCCHH-HHHHGGGGEE--EEEEEEECC
T ss_pred CCCCcEEEECCCCch-HHHHHHHhhc--CCCEEEEEe
Confidence 237999986544221 0146666776 899888743
No 416
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=89.10 E-value=3.9 Score=34.75 Aligned_cols=105 Identities=16% Similarity=0.225 Sum_probs=63.8
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhH-HHHHHHHHHHhCCCCcEEEEEcChhhH--HHH----HHhC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARS-LEVAKKYYERAGVSHKVKIKHGLAADS--LKA----LILN 190 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~-~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~----~~~~ 190 (279)
.+++||-.|++ |.++..+++.+. .+.+|+.++.+++. .+.+.+..+..+ .++.++.+|..+. ... ..+.
T Consensus 46 ~gk~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 122 (291)
T 3ijr_A 46 KGKNVLITGGD-SGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG--VKCVLLPGDLSDEQHCKDIVQETVRQ 122 (291)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT--CCEEEEESCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 46789988855 556666666542 35799999988753 444445454433 4689999998652 111 1111
Q ss_pred CCCCcEEEEEEeCCc----c--------c-----------hHHHHHHHHccCCCCcEEEEe
Q 023645 191 GEASSYDFAFVDAEK----R--------M-----------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 191 ~~~~~fDlI~id~~~----~--------~-----------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
-+.+|+++.++.. . + .....+.+.+.++++|.||.-
T Consensus 123 --~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~i 181 (291)
T 3ijr_A 123 --LGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINT 181 (291)
T ss_dssp --HSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEE
T ss_pred --cCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEE
Confidence 2578999876431 0 0 112344556778888877753
No 417
>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6
Probab=89.08 E-value=1.5 Score=36.96 Aligned_cols=88 Identities=18% Similarity=0.211 Sum_probs=54.6
Q ss_pred EEEEEcCccCHHHHHHHHHCCC-CC--EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC-cEE
Q 023645 122 RCIEVGVYTGYSSLAIALVLPE-SG--CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS-SYD 197 (279)
Q Consensus 122 ~VLEiG~G~G~~t~~la~~~~~-~~--~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~-~fD 197 (279)
+|.=||+ |..+..++..+.. +. +|+++|.+++..+.++ ..|... .. ..+..+. -. ..|
T Consensus 3 ~I~iIG~--G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~----~~g~~~--~~-~~~~~~~---------~~~~aD 64 (281)
T 2g5c_A 3 NVLIVGV--GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV----DLGIID--EG-TTSIAKV---------EDFSPD 64 (281)
T ss_dssp EEEEESC--SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH----HTTSCS--EE-ESCGGGG---------GGTCCS
T ss_pred EEEEEec--CHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHHH----HCCCcc--cc-cCCHHHH---------hcCCCC
Confidence 6777887 5555555544321 23 7999999988766544 334421 11 1232221 13 679
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+|++..+.....+.++.+.+.++++.+++.
T Consensus 65 vVilavp~~~~~~v~~~l~~~l~~~~iv~~ 94 (281)
T 2g5c_A 65 FVMLSSPVRTFREIAKKLSYILSEDATVTD 94 (281)
T ss_dssp EEEECSCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred EEEEcCCHHHHHHHHHHHHhhCCCCcEEEE
Confidence 999987766667778888888888875553
No 418
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.06 E-value=2.8 Score=34.84 Aligned_cols=83 Identities=17% Similarity=0.119 Sum_probs=53.2
Q ss_pred cCCCEEEEEcC-ccCHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHH----HHh
Q 023645 118 LGAQRCIEVGV-YTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKA----LIL 189 (279)
Q Consensus 118 ~~~~~VLEiG~-G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~----~~~ 189 (279)
..+++||-.|+ |.| ++..+++.+ ..+.+|+.++.+++..+.+.+.++..+ ..++.++.+|..+. +.. ..+
T Consensus 20 l~~k~vlITGasg~G-IG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (266)
T 3o38_A 20 LKGKVVLVTAAAGTG-IGSTTARRALLEGADVVISDYHERRLGETRDQLADLG-LGRVEAVVCDVTSTEAVDALITQTVE 97 (266)
T ss_dssp TTTCEEEESSCSSSS-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTC-SSCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCc-hHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcC-CCceEEEEeCCCCHHHHHHHHHHHHH
Confidence 34678888886 444 344444433 236799999999988777777665443 24699999998642 211 111
Q ss_pred CCCCCcEEEEEEeCC
Q 023645 190 NGEASSYDFAFVDAE 204 (279)
Q Consensus 190 ~~~~~~fDlI~id~~ 204 (279)
. .+++|+++..+.
T Consensus 98 ~--~g~id~li~~Ag 110 (266)
T 3o38_A 98 K--AGRLDVLVNNAG 110 (266)
T ss_dssp H--HSCCCEEEECCC
T ss_pred H--hCCCcEEEECCC
Confidence 1 257899988754
No 419
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=88.99 E-value=3 Score=36.03 Aligned_cols=83 Identities=12% Similarity=0.037 Sum_probs=57.6
Q ss_pred CCCEEEEEcCccCHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHH----HHhCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKA----LILNG 191 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~----~~~~~ 191 (279)
.+++||-.|++ |.++..+++.+ ..+.+|+.++.+++..+.+.+.+...+...++.++.+|..+. +.. ....
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~- 84 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR- 84 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh-
Confidence 46789988865 55666666654 236799999999988888777777666544689999998652 121 1111
Q ss_pred CCCcEEEEEEeCC
Q 023645 192 EASSYDFAFVDAE 204 (279)
Q Consensus 192 ~~~~fDlI~id~~ 204 (279)
.+.+|+++.++.
T Consensus 85 -~g~id~lv~nAg 96 (319)
T 3ioy_A 85 -FGPVSILCNNAG 96 (319)
T ss_dssp -TCCEEEEEECCC
T ss_pred -CCCCCEEEECCC
Confidence 257999998764
No 420
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=88.47 E-value=2 Score=39.34 Aligned_cols=104 Identities=16% Similarity=0.239 Sum_probs=61.8
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHH------------HHhCCCCcEEEEEcChhhHHHH
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYY------------ERAGVSHKVKIKHGLAADSLKA 186 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~------------~~~g~~~~v~~~~gd~~~~l~~ 186 (279)
.-+|--||+ |+++..++..+.. +.+|+++|.+++.++..++.. ++.-...++++. .|..+.+
T Consensus 8 ~~~~~vIGl--G~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-td~~ea~-- 82 (446)
T 4a7p_A 8 SVRIAMIGT--GYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-TDLAEGV-- 82 (446)
T ss_dssp CCEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHHHH--
T ss_pred ceEEEEEcC--CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-CCHHHHH--
Confidence 346777776 6666666655432 468999999998876654420 000001223332 2322221
Q ss_pred HHhCCCCCcEEEEEEeCC--cc---------chHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 187 LILNGEASSYDFAFVDAE--KR---------MYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 187 ~~~~~~~~~fDlI~id~~--~~---------~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
..-|+||+.-+ .. ...+.++.+.+.|++|.++|....+.+|.
T Consensus 83 -------~~aDvvii~Vptp~~~~~~~~Dl~~v~~v~~~i~~~l~~g~iVV~~STv~pgt 135 (446)
T 4a7p_A 83 -------KDADAVFIAVGTPSRRGDGHADLSYVFAAAREIAENLTKPSVIVTKSTVPVGT 135 (446)
T ss_dssp -------TTCSEEEECCCCCBCTTTCCBCTHHHHHHHHHHHHSCCSCCEEEECSCCCTTH
T ss_pred -------hcCCEEEEEcCCCCccccCCccHHHHHHHHHHHHHhcCCCCEEEEeCCCCchH
Confidence 45688887633 11 35667788889999998888766555554
No 421
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=88.35 E-value=0.11 Score=45.28 Aligned_cols=93 Identities=15% Similarity=0.148 Sum_probs=58.5
Q ss_pred EEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 122 RCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 122 ~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
+||-+|+ |.|..+..+++.. +++|++++.+++..+.+++ .|... ++ |..+........-....+|+|
T Consensus 153 ~VlV~Ga~G~vG~~~~q~a~~~--Ga~vi~~~~~~~~~~~~~~----lGa~~---v~--~~~~~~~~~~~~~~~~~~d~v 221 (330)
T 1tt7_A 153 SVLVTGATGGVGGIAVSMLNKR--GYDVVASTGNREAADYLKQ----LGASE---VI--SREDVYDGTLKALSKQQWQGA 221 (330)
T ss_dssp CEEEESTTSHHHHHHHHHHHHH--TCCEEEEESSSSTHHHHHH----HTCSE---EE--EHHHHCSSCCCSSCCCCEEEE
T ss_pred eEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcE---EE--ECCCchHHHHHHhhcCCccEE
Confidence 7999996 4566777777765 4689999999888777754 34321 22 111100000000012469998
Q ss_pred EEeCCccchHHHHHHHHccCCCCcEEEEeC
Q 023645 200 FVDAEKRMYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 200 ~id~~~~~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
|-.... ..++.+.+.|++||.++.-.
T Consensus 222 id~~g~----~~~~~~~~~l~~~G~iv~~G 247 (330)
T 1tt7_A 222 VDPVGG----KQLASLLSKIQYGGSVAVSG 247 (330)
T ss_dssp EESCCT----HHHHHHHTTEEEEEEEEECC
T ss_pred EECCcH----HHHHHHHHhhcCCCEEEEEe
Confidence 865543 35778899999999998743
No 422
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=88.31 E-value=8.3 Score=30.63 Aligned_cols=69 Identities=17% Similarity=0.038 Sum_probs=47.0
Q ss_pred EEEEEcCccCHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 122 RCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 122 ~VLEiG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
+||-.| |+|..+..+++.+ ..+.+|++++.++...... ....++++.+|..+.-... -..+|.||
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~--------~~~~~~~~~~D~~d~~~~~-----~~~~d~vi 67 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR--------LGATVATLVKEPLVLTEAD-----LDSVDAVV 67 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH--------TCTTSEEEECCGGGCCHHH-----HTTCSEEE
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEecccccccc--------cCCCceEEecccccccHhh-----cccCCEEE
Confidence 678777 5688888877765 2357999999987654321 1235899999997642222 25689998
Q ss_pred EeCC
Q 023645 201 VDAE 204 (279)
Q Consensus 201 id~~ 204 (279)
..+.
T Consensus 68 ~~ag 71 (224)
T 3h2s_A 68 DALS 71 (224)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 7664
No 423
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=88.16 E-value=2.9 Score=38.13 Aligned_cols=99 Identities=13% Similarity=0.282 Sum_probs=57.6
Q ss_pred CEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHH------------HHhCCCCcEEEEEcChhhHHHHH
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYY------------ERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~------------~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
.+.--||+ |+++..++..+.. +.+|+++|++++.++..++.. ++.-...++.+. .|
T Consensus 12 ~~~~ViGl--GyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~t-td-------- 80 (431)
T 3ojo_A 12 SKLTVVGL--GYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVS-TT-------- 80 (431)
T ss_dssp CEEEEECC--STTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-SS--------
T ss_pred CccEEEee--CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEe-Cc--------
Confidence 35555666 5666665554432 458999999998876655410 000001112222 11
Q ss_pred HhCCCCCcEEEEEEeCCcc------------chHHHHHHHHccCCCCcEEEEeCCCCCCc
Q 023645 188 ILNGEASSYDFAFVDAEKR------------MYQEYFELLLQLIRVGGIIVIDNVLWHGK 235 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~~~------------~~~~~l~~~~~~Lk~gG~lv~dd~~~~g~ 235 (279)
...-|+||+.-+.. ......+.+.+.|++|.++|......+|.
T Consensus 81 -----~~~aDvvii~VpTp~~~~~~~~~Dl~~V~~~~~~i~~~l~~g~iVV~~STV~pgt 135 (431)
T 3ojo_A 81 -----PEASDVFIIAVPTPNNDDQYRSCDISLVMRALDSILPFLKKGNTIIVESTIAPKT 135 (431)
T ss_dssp -----CCCCSEEEECCCCCBCSSSSCBBCCHHHHHHHHHHGGGCCTTEEEEECSCCCTTH
T ss_pred -----hhhCCEEEEEeCCCccccccCCccHHHHHHHHHHHHHhCCCCCEEEEecCCChhH
Confidence 13468888754311 14455677888999998888877777765
No 424
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=88.14 E-value=2.9 Score=42.28 Aligned_cols=101 Identities=13% Similarity=0.033 Sum_probs=64.7
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCC--EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhC------C
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESG--CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILN------G 191 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~--~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~------~ 191 (279)
..+++|+.||.|.+++-+.++ +. .+.++|+++.+.+.-+.|+. ...++.+|+.+........ +
T Consensus 540 ~l~~iDLFaG~GGlslGl~~A---G~~~vv~avEid~~A~~ty~~N~p------~~~~~~~DI~~l~~~~~~~di~~~~~ 610 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQA---GISDTLWAIEMWDPAAQAFRLNNP------GSTVFTEDCNILLKLVMAGETTNSRG 610 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHH---TSEEEEEEECSSHHHHHHHHHHCT------TSEEECSCHHHHHHHHHHTCSBCTTC
T ss_pred CCeEEEeccCccHHHHHHHHC---CCCceEEEEECCHHHHHHHHHhCC------CCccccccHHHHhhhccchhhhhhhh
Confidence 348999999999999998876 33 57899999988877666542 2567788876554322110 0
Q ss_pred ----CCCcEEEEEEeCC--------cc---c--------hHHHHHHHHccCCCCcEEEEeCCC
Q 023645 192 ----EASSYDFAFVDAE--------KR---M--------YQEYFELLLQLIRVGGIIVIDNVL 231 (279)
Q Consensus 192 ----~~~~fDlI~id~~--------~~---~--------~~~~l~~~~~~Lk~gG~lv~dd~~ 231 (279)
..+.+|+|+...+ .. . +..++ .+...++|. ++++.||-
T Consensus 611 ~~lp~~~~vDll~GGpPCQ~FS~ag~~~~~~~~d~R~~L~~~~~-riv~~~rPk-~~llENV~ 671 (1002)
T 3swr_A 611 QRLPQKGDVEMLCGGPPCQGFSGMNRFNSRTYSKFKNSLVVSFL-SYCDYYRPR-FFLLENVR 671 (1002)
T ss_dssp CBCCCTTTCSEEEECCCCTTCCSSSCCCHHHHHHHTTSHHHHHH-HHHHHHCCS-EEEEEEEG
T ss_pred hhcccCCCeeEEEEcCCCcchhhhCCCCCCcccchhhHHHHHHH-HHHHHhCCC-EEEEeccH
Confidence 1246899886543 10 0 11222 334556775 78888874
No 425
>3k96_A Glycerol-3-phosphate dehydrogenase [NAD(P)+]; GPSA, IDP01976, oxidoreductase, phospholipid biosynthesis; HET: EPE; 2.10A {Coxiella burnetii}
Probab=88.11 E-value=1.5 Score=38.92 Aligned_cols=96 Identities=15% Similarity=0.064 Sum_probs=59.9
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHHHH------hCCCCcEEEEEcChhhHHHHHHhCCC
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYER------AGVSHKVKIKHGLAADSLKALILNGE 192 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~------~g~~~~v~~~~gd~~~~l~~~~~~~~ 192 (279)
.++|.-||+ |.++..++..+.. +.+|+.+|.+++.++..++.-.. ..+..++.+. .|..+. +
T Consensus 29 ~mkI~VIGa--G~mG~alA~~La~~G~~V~l~~r~~~~~~~i~~~~~~~~~l~g~~l~~~i~~t-~d~~ea---~----- 97 (356)
T 3k96_A 29 KHPIAILGA--GSWGTALALVLARKGQKVRLWSYESDHVDEMQAEGVNNRYLPNYPFPETLKAY-CDLKAS---L----- 97 (356)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHTTTCCEEEECSCHHHHHHHHHHSSBTTTBTTCCCCTTEEEE-SCHHHH---H-----
T ss_pred CCeEEEECc--cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHcCCCcccCCCCccCCCeEEE-CCHHHH---H-----
Confidence 357888888 5566655555432 35799999998877665542110 0111223332 233222 1
Q ss_pred CCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 193 ASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 193 ~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
...|+||+..+.....+.++.+.+.++++.+++.
T Consensus 98 -~~aDvVilaVp~~~~~~vl~~i~~~l~~~~ivvs 131 (356)
T 3k96_A 98 -EGVTDILIVVPSFAFHEVITRMKPLIDAKTRIAW 131 (356)
T ss_dssp -TTCCEEEECCCHHHHHHHHHHHGGGCCTTCEEEE
T ss_pred -hcCCEEEECCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 4579999988777777888899999998876553
No 426
>1lnq_A MTHK channels, potassium channel related protein; rossman fold, helix bundle, membrane protein; 3.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.2.1.9 d.286.1.1 f.14.1.1 PDB: 3rbz_A
Probab=87.98 E-value=3.1 Score=36.09 Aligned_cols=95 Identities=17% Similarity=0.087 Sum_probs=61.0
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
.++|+=+|+ |..+..+++.+...+.|+.+|.+++.++ +++ ..+.++.||+.+. ..+... +-...|.+
T Consensus 115 ~~~viI~G~--G~~g~~l~~~L~~~g~v~vid~~~~~~~-~~~--------~~~~~i~gd~~~~-~~L~~a-~i~~a~~v 181 (336)
T 1lnq_A 115 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKK-VLR--------SGANFVHGDPTRV-SDLEKA-NVRGARAV 181 (336)
T ss_dssp -CEEEEESC--CHHHHHHHTTGGGSCEEEEESCGGGHHH-HHH--------TTCEEEESCTTSH-HHHHHT-CSTTEEEE
T ss_pred cCCEEEECC--cHHHHHHHHHHHhCCcEEEEeCChhhhh-HHh--------CCcEEEEeCCCCH-HHHHhc-ChhhccEE
Confidence 347888775 8888888887643334999999998876 443 2378999998653 222111 14678999
Q ss_pred EEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 200 FVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 200 ~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
++..+.+...-..-...+.+.|...++.
T Consensus 182 i~~~~~d~~n~~~~~~ar~~~~~~~iia 209 (336)
T 1lnq_A 182 IVDLESDSETIHCILGIRKIDESVRIIA 209 (336)
T ss_dssp EECCSSHHHHHHHHHHHHTTCTTSEEEE
T ss_pred EEcCCccHHHHHHHHHHHHHCCCCeEEE
Confidence 8865543333333444566777766665
No 427
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=87.84 E-value=1.9 Score=34.98 Aligned_cols=93 Identities=18% Similarity=0.123 Sum_probs=58.6
Q ss_pred EEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCcEEE
Q 023645 122 RCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYDF 198 (279)
Q Consensus 122 ~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~fDl 198 (279)
+|+=+|+ |..+..+++.+. .+..|+.+|.+++.++...+. . .+.++.+|+.+. +... .-...|+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~---~----~~~~i~gd~~~~~~l~~a----~i~~ad~ 68 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKK---L----KATIIHGDGSHKEILRDA----EVSKNDV 68 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHH---S----SSEEEESCTTSHHHHHHH----TCCTTCE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHH---c----CCeEEEcCCCCHHHHHhc----CcccCCE
Confidence 4666675 777777776653 256899999999876554321 1 257889998652 3322 1357899
Q ss_pred EEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 199 AFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 199 I~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
|++..+............+.+.+...++.
T Consensus 69 vi~~~~~d~~n~~~~~~a~~~~~~~~iia 97 (218)
T 3l4b_C 69 VVILTPRDEVNLFIAQLVMKDFGVKRVVS 97 (218)
T ss_dssp EEECCSCHHHHHHHHHHHHHTSCCCEEEE
T ss_pred EEEecCCcHHHHHHHHHHHHHcCCCeEEE
Confidence 98876554444445555555556666665
No 428
>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*
Probab=87.81 E-value=0.81 Score=41.00 Aligned_cols=43 Identities=23% Similarity=0.281 Sum_probs=31.1
Q ss_pred cCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHH
Q 023645 118 LGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKK 162 (279)
Q Consensus 118 ~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~ 162 (279)
.++.+|+=+|+|. |..+..+++.++ .+|+.+|.++...+.+++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~~~d~~~~~~~~~~~ 213 (384)
T 1l7d_A 170 VPPARVLVFGVGVAGLQAIATAKRLG--AVVMATDVRAATKEQVES 213 (384)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCSTTHHHHHH
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHHH
Confidence 4688999999863 444555666664 689999999887666543
No 429
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=87.72 E-value=8.5 Score=32.60 Aligned_cols=82 Identities=20% Similarity=0.132 Sum_probs=51.8
Q ss_pred cCCCEEEEEcCccC-HHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHH----HHh
Q 023645 118 LGAQRCIEVGVYTG-YSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKA----LIL 189 (279)
Q Consensus 118 ~~~~~VLEiG~G~G-~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~----~~~ 189 (279)
..++++|-.|.+.| .++..+++.+ ..+.+|+.++.++...+.+++..+..+ ++.++.+|..+. +.. ..+
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG---AFVAGHCDVADAASIDAVFETLEK 105 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT---CEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHH
Confidence 46789999997633 2444444443 235799999999766666666555444 478889998642 222 211
Q ss_pred CCCCCcEEEEEEeCC
Q 023645 190 NGEASSYDFAFVDAE 204 (279)
Q Consensus 190 ~~~~~~fDlI~id~~ 204 (279)
. -+.+|+++.++.
T Consensus 106 ~--~g~iD~lVnnAG 118 (293)
T 3grk_A 106 K--WGKLDFLVHAIG 118 (293)
T ss_dssp H--TSCCSEEEECCC
T ss_pred h--cCCCCEEEECCc
Confidence 1 257999987754
No 430
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=87.50 E-value=6.7 Score=33.27 Aligned_cols=83 Identities=13% Similarity=0.057 Sum_probs=52.0
Q ss_pred CCCEEEEEcCcc-CHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 119 GAQRCIEVGVYT-GYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 119 ~~~~VLEiG~G~-G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
.++++|-.|.+. ...+..+++.+ ..+.+|+.++.+++..+.+++..+..+ .+.++.+|..+. +..+.++- .
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG---VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT---CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC---CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 467899999753 24555555543 236799999999877666666665544 357888888642 22221100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
-+.+|+++.++.
T Consensus 106 ~g~iD~lVnnAG 117 (296)
T 3k31_A 106 WGSLDFVVHAVA 117 (296)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899998764
No 431
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=87.20 E-value=3.4 Score=35.31 Aligned_cols=84 Identities=18% Similarity=0.101 Sum_probs=56.3
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
..+++||-.|++ |.++..+++.+. .+.+|+.++.+++.++.+.+.++..+ .++.++.+|..+. +..+.+.- .
T Consensus 29 l~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (301)
T 3tjr_A 29 FDGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQG--FDAHGVVCDVRHLDEMVRLADEAFRL 105 (301)
T ss_dssp STTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcC--CceEEEEccCCCHHHHHHHHHHHHHh
Confidence 456789988865 556666666542 35799999999988887777776654 3588999998652 22211100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+.+|+++.++.
T Consensus 106 ~g~id~lvnnAg 117 (301)
T 3tjr_A 106 LGGVDVVFSNAG 117 (301)
T ss_dssp HSSCSEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 257999998754
No 432
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=86.94 E-value=9.6 Score=31.69 Aligned_cols=110 Identities=14% Similarity=0.076 Sum_probs=64.0
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCC-hhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERD-ARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-- 191 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s-~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~-- 191 (279)
..++++|-.|++ |.++..+++.+. .+.+|+.++.. ++..+...+.++..+ .++.++.+|..+. +..+.++-
T Consensus 16 l~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 92 (270)
T 3is3_A 16 LDGKVALVTGSG-RGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALG--SDAIAIKADIRQVPEIVKLFDQAVA 92 (270)
T ss_dssp CTTCEEEESCTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHH
Confidence 356788888855 556666666542 35788887764 455555555565544 4588999998652 22211100
Q ss_pred CCCcEEEEEEeCCc-----------cch-----------HHHHHHHHccCCCCcEEEEeCC
Q 023645 192 EASSYDFAFVDAEK-----------RMY-----------QEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 192 ~~~~fDlI~id~~~-----------~~~-----------~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.-+..|+++.++.. +.+ ....+.+.+.++++|.||.-..
T Consensus 93 ~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 153 (270)
T 3is3_A 93 HFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSS 153 (270)
T ss_dssp HHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECC
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeC
Confidence 02578999876431 111 1234455677888887776443
No 433
>2y0c_A BCEC, UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide, C fibrosis; HET: UGA; 1.75A {Burkholderia cepacia} PDB: 2y0d_A* 2y0e_A*
Probab=86.72 E-value=3.9 Score=37.72 Aligned_cols=104 Identities=11% Similarity=0.103 Sum_probs=60.7
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHHHH---hCC---------CCcEEEEEcChhhHHH
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYER---AGV---------SHKVKIKHGLAADSLK 185 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~---~g~---------~~~v~~~~gd~~~~l~ 185 (279)
..++|.-||+| +.+..++..+.. +.+|+++|.+++.++..++.... .++ ..++++. .|..+.+
T Consensus 7 ~~~~I~VIG~G--~vG~~lA~~la~~G~~V~~~d~~~~~v~~l~~~~~~i~e~gl~~~l~~~~~~~~l~~t-td~~~a~- 82 (478)
T 2y0c_A 7 GSMNLTIIGSG--SVGLVTGACLADIGHDVFCLDVDQAKIDILNNGGVPIHEPGLKEVIARNRSAGRLRFS-TDIEAAV- 82 (478)
T ss_dssp CCCEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEE-CCHHHHH-
T ss_pred CCceEEEECcC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHHhcccCCEEEE-CCHHHHh-
Confidence 45689889885 444444433321 45899999999887766542100 010 1123332 2222221
Q ss_pred HHHhCCCCCcEEEEEEeCCc----------cchHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 186 ALILNGEASSYDFAFVDAEK----------RMYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 186 ~~~~~~~~~~fDlI~id~~~----------~~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
...|+||+..+. ......++.+.+.|++|.+++....+..|
T Consensus 83 --------~~aDvviiaVptp~~~~~~~dl~~v~~v~~~i~~~l~~~~iVV~~STv~~g 133 (478)
T 2y0c_A 83 --------AHGDVQFIAVGTPPDEDGSADLQYVLAAARNIGRYMTGFKVIVDKSTVPVG 133 (478)
T ss_dssp --------HHCSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHCCSCEEEEECSCCCTT
T ss_pred --------hcCCEEEEEeCCCcccCCCccHHHHHHHHHHHHHhcCCCCEEEEeCCcCCC
Confidence 346899886543 45667788888899998877665444444
No 434
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=86.41 E-value=7.4 Score=32.33 Aligned_cols=83 Identities=18% Similarity=0.083 Sum_probs=49.8
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChh---HHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC-
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDAR---SLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG- 191 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~---~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~- 191 (279)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+.. ..+...+.++.. ..++.++.+|..+. +..+.++-
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~--~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQ--GAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTT--TCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhc--CCcEEEEECCCCCHHHHHHHHHHHH
Confidence 46788888865 556777777653 3568998876543 344444444433 34688999998542 22221100
Q ss_pred -CCCcEEEEEEeCC
Q 023645 192 -EASSYDFAFVDAE 204 (279)
Q Consensus 192 -~~~~fDlI~id~~ 204 (279)
.-+..|+++.++.
T Consensus 87 ~~~g~iD~lvnnAg 100 (262)
T 3ksu_A 87 KEFGKVDIAINTVG 100 (262)
T ss_dssp HHHCSEEEEEECCC
T ss_pred HHcCCCCEEEECCC
Confidence 0257999998754
No 435
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=86.38 E-value=4.6 Score=33.55 Aligned_cols=83 Identities=14% Similarity=0.054 Sum_probs=51.5
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEE-eCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVAC-ERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-- 191 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~i-D~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~-- 191 (279)
..++++|-.|++ |.++..+++.+. .+.+|+.+ +.+++..+.+.+.++..+ .++.++.+|..+. +..+.++-
T Consensus 6 l~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~ 82 (259)
T 3edm_A 6 FTNRTIVVAGAG-RDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLG--RSALAIKADLTNAAEVEAAISAAAD 82 (259)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTT--SCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CceEEEEcCCCCHHHHHHHHHHHHH
Confidence 356789988865 456666666542 35788887 667776666666665444 4588899998642 22211100
Q ss_pred CCCcEEEEEEeC
Q 023645 192 EASSYDFAFVDA 203 (279)
Q Consensus 192 ~~~~fDlI~id~ 203 (279)
.-+..|+++.++
T Consensus 83 ~~g~id~lv~nA 94 (259)
T 3edm_A 83 KFGEIHGLVHVA 94 (259)
T ss_dssp HHCSEEEEEECC
T ss_pred HhCCCCEEEECC
Confidence 025799998765
No 436
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=86.15 E-value=5.5 Score=35.54 Aligned_cols=83 Identities=8% Similarity=0.002 Sum_probs=56.1
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCC-C-CEEEEEeCChhHHHHHHHHHHHhCC--CCcEEEEEcChhhH--HHHHHhCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPE-S-GCLVACERDARSLEVAKKYYERAGV--SHKVKIKHGLAADS--LKALILNG 191 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~-~-~~v~~iD~s~~~~~~a~~~~~~~g~--~~~v~~~~gd~~~~--l~~~~~~~ 191 (279)
..+++||-.| |+|..+..+++.+-. + .+|++++.++.......+.+..... ..++.++.+|..+. +.....
T Consensus 33 ~~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~-- 109 (399)
T 3nzo_A 33 VSQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKA-- 109 (399)
T ss_dssp HHTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHH--
T ss_pred hCCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHH--
Confidence 4567899888 568888888877532 4 5899999998876655554443211 24689999998763 222221
Q ss_pred CCCcEEEEEEeCC
Q 023645 192 EASSYDFAFVDAE 204 (279)
Q Consensus 192 ~~~~fDlI~id~~ 204 (279)
...+|.||..+.
T Consensus 110 -~~~~D~Vih~Aa 121 (399)
T 3nzo_A 110 -DGQYDYVLNLSA 121 (399)
T ss_dssp -CCCCSEEEECCC
T ss_pred -hCCCCEEEECCC
Confidence 357899987654
No 437
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=86.13 E-value=1.7 Score=37.18 Aligned_cols=86 Identities=16% Similarity=0.225 Sum_probs=55.4
Q ss_pred CEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
++|.-||+ |..+..++..+.. +.+|+++|.+++..+.+.+ .| +++ ..+ +... .. .|+|
T Consensus 16 ~~I~vIG~--G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----~g----~~~-~~~----~~~~-----~~-aDvv 74 (296)
T 3qha_A 16 LKLGYIGL--GNMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE----AG----ATL-ADS----VADV-----AA-ADLI 74 (296)
T ss_dssp CCEEEECC--STTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH----TT----CEE-CSS----HHHH-----TT-SSEE
T ss_pred CeEEEECc--CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----CC----CEE-cCC----HHHH-----Hh-CCEE
Confidence 47888887 5566666655432 4589999999987665543 23 222 122 2232 24 8999
Q ss_pred EEeCC-ccchHHHHHHHHccCCCCcEEEE
Q 023645 200 FVDAE-KRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 200 ~id~~-~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
|+..+ .......++.+.+.+++|.+++-
T Consensus 75 i~~vp~~~~~~~v~~~l~~~l~~g~ivv~ 103 (296)
T 3qha_A 75 HITVLDDAQVREVVGELAGHAKPGTVIAI 103 (296)
T ss_dssp EECCSSHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred EEECCChHHHHHHHHHHHHhcCCCCEEEE
Confidence 98766 34556677888888998876654
No 438
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=86.04 E-value=5 Score=34.05 Aligned_cols=107 Identities=17% Similarity=0.154 Sum_probs=63.6
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCCh--hHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDA--RSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-- 191 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~--~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~-- 191 (279)
.++++|-.|+ +|.++..+++.+. .+.+|+.++.+. ...+...+.++..+ .++.++.+|..+. +..+.++-
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 124 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECG--RKAVLLPGDLSDESFARSLVHKARE 124 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTT--CCEEECCCCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 4678998885 4566777766542 357899988863 34455555555544 4588888888642 11111100
Q ss_pred CCCcEEEEEEeCCcc------------c-----------hHHHHHHHHccCCCCcEEEEe
Q 023645 192 EASSYDFAFVDAEKR------------M-----------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 192 ~~~~fDlI~id~~~~------------~-----------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
..+.+|+++.++... . .....+.+.+.++++|.||.-
T Consensus 125 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~i 184 (294)
T 3r3s_A 125 ALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITT 184 (294)
T ss_dssp HHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEE
T ss_pred HcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEE
Confidence 025789998765410 0 112344556778888877763
No 439
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=85.98 E-value=1.7 Score=39.45 Aligned_cols=93 Identities=18% Similarity=0.158 Sum_probs=61.3
Q ss_pred CEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCcEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYD 197 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~fD 197 (279)
.+|+=+|+ |..+..+++.+. .+..|+.+|.+++.++.+++ .| +.++.||+.+. +... + -...|
T Consensus 5 ~~viIiG~--Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~~----~g----~~vi~GDat~~~~L~~a---g-i~~A~ 70 (413)
T 3l9w_A 5 MRVIIAGF--GRFGQITGRLLLSSGVKMVVLDHDPDHIETLRK----FG----MKVFYGDATRMDLLESA---G-AAKAE 70 (413)
T ss_dssp CSEEEECC--SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHHH----TT----CCCEESCTTCHHHHHHT---T-TTTCS
T ss_pred CeEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHh----CC----CeEEEcCCCCHHHHHhc---C-CCccC
Confidence 46777776 667777666553 24689999999998877653 23 56788998652 3322 1 36789
Q ss_pred EEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 198 FAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 198 lI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
+|++..+.......+-...+.+.|...+++
T Consensus 71 ~viv~~~~~~~n~~i~~~ar~~~p~~~Iia 100 (413)
T 3l9w_A 71 VLINAIDDPQTNLQLTEMVKEHFPHLQIIA 100 (413)
T ss_dssp EEEECCSSHHHHHHHHHHHHHHCTTCEEEE
T ss_pred EEEECCCChHHHHHHHHHHHHhCCCCeEEE
Confidence 988866544444444555667778866665
No 440
>3gt0_A Pyrroline-5-carboxylate reductase; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; 2.00A {Bacillus cereus atcc 14579}
Probab=85.98 E-value=0.49 Score=39.43 Aligned_cols=87 Identities=15% Similarity=0.245 Sum_probs=52.2
Q ss_pred CEEEEEcCccCHHHHHHHHHCCC-CC----EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPE-SG----CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~-~~----~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
++|.-||+ |..+..++..+.. +. +|+.+|.+++..+...+.+ |. .. ..+..+.+ ..
T Consensus 3 ~~i~iIG~--G~mG~~~a~~l~~~g~~~~~~V~~~~r~~~~~~~~~~~~---g~----~~-~~~~~e~~---------~~ 63 (247)
T 3gt0_A 3 KQIGFIGC--GNMGMAMIGGMINKNIVSSNQIICSDLNTANLKNASEKY---GL----TT-TTDNNEVA---------KN 63 (247)
T ss_dssp CCEEEECC--SHHHHHHHHHHHHTTSSCGGGEEEECSCHHHHHHHHHHH---CC----EE-CSCHHHHH---------HH
T ss_pred CeEEEECc--cHHHHHHHHHHHhCCCCCCCeEEEEeCCHHHHHHHHHHh---CC----EE-eCChHHHH---------Hh
Confidence 36777887 4555555544321 22 7999999998766554432 32 22 22332222 34
Q ss_pred EEEEEEeCCccchHHHHHHHHccCCCCcEEE
Q 023645 196 YDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 196 fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
.|+||+-.......+.++.+.+.+++|.+++
T Consensus 64 aDvVilav~~~~~~~v~~~l~~~l~~~~~vv 94 (247)
T 3gt0_A 64 ADILILSIKPDLYASIINEIKEIIKNDAIIV 94 (247)
T ss_dssp CSEEEECSCTTTHHHHC---CCSSCTTCEEE
T ss_pred CCEEEEEeCHHHHHHHHHHHHhhcCCCCEEE
Confidence 7999988776677778888888888887666
No 441
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=85.87 E-value=1 Score=39.58 Aligned_cols=101 Identities=13% Similarity=0.065 Sum_probs=54.4
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEE-EEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH-HHHHHhCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLV-ACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS-LKALILNG 191 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~-~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~-l~~~~~~~ 191 (279)
...++++||-+|+ +.|..+..+++..+ ++++ .++.++...+ ..+.++..|.. .++. ..+. ...+.+..
T Consensus 164 ~~~~g~~VlV~Ga~G~vG~~aiqlak~~G--a~vi~~~~~~~~~~~-~~~~~~~lGa~---~vi~--~~~~~~~~~~~~~ 235 (357)
T 1zsy_A 164 QLQPGDSVIQNASNSGVGQAVIQIAAALG--LRTINVVRDRPDIQK-LSDRLKSLGAE---HVIT--EEELRRPEMKNFF 235 (357)
T ss_dssp CCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEECCCSCHHH-HHHHHHHTTCS---EEEE--HHHHHSGGGGGTT
T ss_pred ccCCCCEEEEeCCcCHHHHHHHHHHHHcC--CEEEEEecCccchHH-HHHHHHhcCCc---EEEe--cCcchHHHHHHHH
Confidence 4557789999996 46777888888763 5554 4555443211 12233445643 2221 1110 01111110
Q ss_pred CC-CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 192 EA-SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 192 ~~-~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
.. +.+|+||-..... ....+.+.|++||.++.-
T Consensus 236 ~~~~~~Dvvid~~g~~----~~~~~~~~l~~~G~iv~~ 269 (357)
T 1zsy_A 236 KDMPQPRLALNCVGGK----SSTELLRQLARGGTMVTY 269 (357)
T ss_dssp SSSCCCSEEEESSCHH----HHHHHHTTSCTTCEEEEC
T ss_pred hCCCCceEEEECCCcH----HHHHHHHhhCCCCEEEEE
Confidence 01 2589887544322 224578999999999874
No 442
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=85.77 E-value=3.7 Score=34.49 Aligned_cols=82 Identities=20% Similarity=0.096 Sum_probs=57.1
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HH----HHHhC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LK----ALILN 190 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~----~~~~~ 190 (279)
.+++.+|--|.+.| .+..+++.+ ..+++|+.+|.+++.++.+.+.++..|. ++.++.+|..+. .. ...+.
T Consensus 5 L~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~--~~~~~~~Dvt~~~~v~~~~~~~~~~ 81 (254)
T 4fn4_A 5 LKNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK--EVLGVKADVSKKKDVEEFVRRTFET 81 (254)
T ss_dssp GTTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC--CEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEccCCCHHHHHHHHHHHHHH
Confidence 46788888886655 566666554 2468999999999998888888877663 588899998642 11 11111
Q ss_pred CCCCcEEEEEEeCC
Q 023645 191 GEASSYDFAFVDAE 204 (279)
Q Consensus 191 ~~~~~fDlI~id~~ 204 (279)
-++.|+++.++.
T Consensus 82 --~G~iDiLVNNAG 93 (254)
T 4fn4_A 82 --YSRIDVLCNNAG 93 (254)
T ss_dssp --HSCCCEEEECCC
T ss_pred --cCCCCEEEECCc
Confidence 268999987653
No 443
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=85.75 E-value=7.8 Score=31.96 Aligned_cols=82 Identities=17% Similarity=0.089 Sum_probs=53.3
Q ss_pred cCCCEEEEEcCc-cCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HH----HHHh
Q 023645 118 LGAQRCIEVGVY-TGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LK----ALIL 189 (279)
Q Consensus 118 ~~~~~VLEiG~G-~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~----~~~~ 189 (279)
...++||-.|++ +|.++..+++.+. .+.+|+.++.++...+.+++..+..+ ++.++.+|..+. +. ...+
T Consensus 12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~---~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFG---SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcC---CcEEEECCCCCHHHHHHHHHHHHH
Confidence 457799999974 3556666665542 35799999998776666666555543 377888888642 22 2211
Q ss_pred CCCCCcEEEEEEeCC
Q 023645 190 NGEASSYDFAFVDAE 204 (279)
Q Consensus 190 ~~~~~~fDlI~id~~ 204 (279)
. .+++|+++.++.
T Consensus 89 ~--~g~id~lv~nAg 101 (271)
T 3ek2_A 89 H--WDSLDGLVHSIG 101 (271)
T ss_dssp H--CSCEEEEEECCC
T ss_pred H--cCCCCEEEECCc
Confidence 1 258999997654
No 444
>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}
Probab=85.66 E-value=0.98 Score=40.55 Aligned_cols=42 Identities=19% Similarity=0.198 Sum_probs=31.8
Q ss_pred CCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHH
Q 023645 119 GAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKK 162 (279)
Q Consensus 119 ~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~ 162 (279)
++.+|+-||+|. |..+..++..+ +++|+++|.+++..+.+++
T Consensus 183 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 225 (381)
T 3p2y_A 183 KPASALVLGVGVAGLQALATAKRL--GAKTTGYDVRPEVAEQVRS 225 (381)
T ss_dssp CCCEEEEESCSHHHHHHHHHHHHH--TCEEEEECSSGGGHHHHHH
T ss_pred CCCEEEEECchHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH
Confidence 678999999973 44555566665 4799999999988776654
No 445
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=85.52 E-value=8.1 Score=32.33 Aligned_cols=108 Identities=17% Similarity=0.075 Sum_probs=63.1
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCCh-hHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDA-RSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-- 191 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~-~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~-- 191 (279)
..++++|-.|++ |.++..+++.+. .+.+|+.++... +..+...+.++..+ .++.++.+|..+. +..+.++-
T Consensus 29 l~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 105 (271)
T 3v2g_A 29 LAGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAG--GRAVAIRADNRDAEAIEQAIRETVE 105 (271)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 356789988865 556666666542 357888886653 55555555555544 3588899998642 12211100
Q ss_pred CCCcEEEEEEeCCc-----------cc-----------hHHHHHHHHccCCCCcEEEEe
Q 023645 192 EASSYDFAFVDAEK-----------RM-----------YQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 192 ~~~~fDlI~id~~~-----------~~-----------~~~~l~~~~~~Lk~gG~lv~d 228 (279)
..++.|+++.++.. +. .....+.+.+.++++|.||.-
T Consensus 106 ~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~i 164 (271)
T 3v2g_A 106 ALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITI 164 (271)
T ss_dssp HHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEE
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEE
Confidence 02578999876531 01 112344456777788877663
No 446
>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6
Probab=85.42 E-value=4.3 Score=34.00 Aligned_cols=86 Identities=15% Similarity=0.135 Sum_probs=53.9
Q ss_pred EEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 122 RCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 122 ~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
+|.=||+ |..+..++..+. .+.+|+++|.+++..+.++ ..|... .+ ..+..+. ...|+|+
T Consensus 2 ~i~iiG~--G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~----~~g~~~--~~-~~~~~~~----------~~~D~vi 62 (279)
T 2f1k_A 2 KIGVVGL--GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV----ERQLVD--EA-GQDLSLL----------QTAKIIF 62 (279)
T ss_dssp EEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH----HTTSCS--EE-ESCGGGG----------TTCSEEE
T ss_pred EEEEEcC--cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH----hCCCCc--cc-cCCHHHh----------CCCCEEE
Confidence 5777887 555555554432 1358999999988765543 234322 11 2232211 3579999
Q ss_pred EeCCccchHHHHHHHHccCCCCcEEE
Q 023645 201 VDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 201 id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
+..+.......++.+.+.+++|.+++
T Consensus 63 ~av~~~~~~~~~~~l~~~~~~~~~vv 88 (279)
T 2f1k_A 63 LCTPIQLILPTLEKLIPHLSPTAIVT 88 (279)
T ss_dssp ECSCHHHHHHHHHHHGGGSCTTCEEE
T ss_pred EECCHHHHHHHHHHHHhhCCCCCEEE
Confidence 88776667778888888888877554
No 447
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=85.03 E-value=2.5 Score=34.49 Aligned_cols=93 Identities=10% Similarity=0.111 Sum_probs=57.1
Q ss_pred CEEEEEcCccCHHHHHHHHHCCC-C-CEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCcE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPE-S-GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSY 196 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~-~-~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~f 196 (279)
++||-.| |+|..+..+++.+-. + .+|++++.+++.... -...+++++.+|..+. +.... ..+
T Consensus 24 k~vlVtG-atG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~--------~~~~~~~~~~~Dl~d~~~~~~~~-----~~~ 89 (236)
T 3qvo_A 24 KNVLILG-AGGQIARHVINQLADKQTIKQTLFARQPAKIHK--------PYPTNSQIIMGDVLNHAALKQAM-----QGQ 89 (236)
T ss_dssp EEEEEET-TTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCS--------SCCTTEEEEECCTTCHHHHHHHH-----TTC
T ss_pred cEEEEEe-CCcHHHHHHHHHHHhCCCceEEEEEcChhhhcc--------cccCCcEEEEecCCCHHHHHHHh-----cCC
Confidence 4788777 568888888877643 4 589999998764321 1123689999998652 33332 467
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCC--cEEEE
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVG--GIIVI 227 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~g--G~lv~ 227 (279)
|.||............+.+.+.++.. |.||.
T Consensus 90 D~vv~~a~~~~~~~~~~~~~~~~~~~~~~~iV~ 122 (236)
T 3qvo_A 90 DIVYANLTGEDLDIQANSVIAAMKACDVKRLIF 122 (236)
T ss_dssp SEEEEECCSTTHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEcCCCCchhHHHHHHHHHHHHcCCCEEEE
Confidence 99998776544333334444443332 44443
No 448
>1bg6_A N-(1-D-carboxylethyl)-L-norvaline dehydrogenase; L) stereospecific opine dehydrogenase, oxidoreductase; 1.80A {Arthrobacter SP} SCOP: a.100.1.5 c.2.1.6
Probab=85.03 E-value=3 Score=36.31 Aligned_cols=97 Identities=12% Similarity=0.142 Sum_probs=57.7
Q ss_pred CEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHH----hCCCCcEE--EEEcChhhHHHHHHhCCCC
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYER----AGVSHKVK--IKHGLAADSLKALILNGEA 193 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~----~g~~~~v~--~~~gd~~~~l~~~~~~~~~ 193 (279)
++|.=||+| ..+..++..+. .+.+|+.+|.+++..+..++.... .+...... ....+ +... -
T Consensus 5 mki~iiG~G--~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-----~ 73 (359)
T 1bg6_A 5 KTYAVLGLG--NGGHAFAAYLALKGQSVLAWDIDAQRIKEIQDRGAIIAEGPGLAGTAHPDLLTSD----IGLA-----V 73 (359)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHTSEEEESSSCCEEECCSEEESC----HHHH-----H
T ss_pred CeEEEECCC--HHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHhcCCeEEeccccccccccceecCC----HHHH-----H
Confidence 589999885 45544444332 145899999998876655442100 00000000 11122 2221 1
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEEe
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVID 228 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~d 228 (279)
..+|+||+........+.++.+.+.+++|.+++..
T Consensus 74 ~~~D~vi~~v~~~~~~~~~~~l~~~l~~~~~vv~~ 108 (359)
T 1bg6_A 74 KDADVILIVVPAIHHASIAANIASYISEGQLIILN 108 (359)
T ss_dssp TTCSEEEECSCGGGHHHHHHHHGGGCCTTCEEEES
T ss_pred hcCCEEEEeCCchHHHHHHHHHHHhCCCCCEEEEc
Confidence 46899999887666778888888999998766653
No 449
>1dlj_A UDP-glucose dehydrogenase; rossmann fold, ternary complex, crystallographic dimer, oxidoreductase; HET: NAI UGA; 1.80A {Streptococcus pyogenes} SCOP: a.100.1.4 c.2.1.6 c.26.3.1 PDB: 1dli_A*
Probab=85.02 E-value=6.7 Score=35.16 Aligned_cols=98 Identities=9% Similarity=0.168 Sum_probs=58.2
Q ss_pred EEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHH------------HHhCCCCcEEEEEcChhhHHHHHHh
Q 023645 122 RCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYY------------ERAGVSHKVKIKHGLAADSLKALIL 189 (279)
Q Consensus 122 ~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~------------~~~g~~~~v~~~~gd~~~~l~~~~~ 189 (279)
+|.-||+ |+.+..++..+..+.+|+++|.+++.++..++.. .. . ..++.+. .+..+.+
T Consensus 2 kI~VIG~--G~vG~~~A~~La~G~~V~~~d~~~~~~~~l~~~~~~i~e~~l~~~~~~-~-~~~l~~t-~~~~~~~----- 71 (402)
T 1dlj_A 2 KIAVAGS--GYVGLSLGVLLSLQNEVTIVDILPSKVDKINNGLSPIQDEYIEYYLKS-K-QLSIKAT-LDSKAAY----- 71 (402)
T ss_dssp EEEEECC--SHHHHHHHHHHTTTSEEEEECSCHHHHHHHHTTCCSSCCHHHHHHHHH-S-CCCEEEE-SCHHHHH-----
T ss_pred EEEEECC--CHHHHHHHHHHhCCCEEEEEECCHHHHHHHHcCCCCcCCCCHHHHHHh-c-cCcEEEe-CCHHHHh-----
Confidence 5666776 7777777776654568999999998766543210 00 0 1122221 2222221
Q ss_pred CCCCCcEEEEEEeCCcc-----------chHHHHHHHHccCCCCcEEEEeCCCCCC
Q 023645 190 NGEASSYDFAFVDAEKR-----------MYQEYFELLLQLIRVGGIIVIDNVLWHG 234 (279)
Q Consensus 190 ~~~~~~fDlI~id~~~~-----------~~~~~l~~~~~~Lk~gG~lv~dd~~~~g 234 (279)
...|+||+..+.. ...+.++.+.+ +++|.+++.......|
T Consensus 72 ----~~aDvviiavpt~~~~~~~~~dl~~v~~v~~~i~~-l~~~~iVV~~ST~~~g 122 (402)
T 1dlj_A 72 ----KEAELVIIATPTNYNSRINYFDTQHVETVIKEVLS-VNSHATLIIKSTIPIG 122 (402)
T ss_dssp ----HHCSEEEECCCCCEETTTTEECCHHHHHHHHHHHH-HCSSCEEEECSCCCTT
T ss_pred ----cCCCEEEEecCCCcccCCCCccHHHHHHHHHHHHh-hCCCCEEEEeCCCCcc
Confidence 3468998865433 36677777888 8888877764444443
No 450
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=84.95 E-value=3.9 Score=34.14 Aligned_cols=83 Identities=12% Similarity=0.018 Sum_probs=56.1
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCc
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASS 195 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~ 195 (279)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++..+...+.+...+....+.++.+|..+. +..+.+. -+.
T Consensus 9 ~~k~~lVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~--~g~ 85 (267)
T 3t4x_A 9 KGKTALVTGST-AGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEK--YPK 85 (267)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHH--CCC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHh--cCC
Confidence 46788888854 566666666542 36799999999988777766666655445678888888642 2333222 357
Q ss_pred EEEEEEeCC
Q 023645 196 YDFAFVDAE 204 (279)
Q Consensus 196 fDlI~id~~ 204 (279)
+|+++.++.
T Consensus 86 id~lv~nAg 94 (267)
T 3t4x_A 86 VDILINNLG 94 (267)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899987654
No 451
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=84.83 E-value=2.1 Score=34.41 Aligned_cols=86 Identities=12% Similarity=0.164 Sum_probs=53.3
Q ss_pred CEEEEEcCccCHHHHHHHHHCC--CCCEEEEEeCChh-HHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCc
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP--ESGCLVACERDAR-SLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASS 195 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~--~~~~v~~iD~s~~-~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~ 195 (279)
++||-.| |+|..+..+++.+. .+.+|++++.+++ ..+... .. ..++.++.+|..+. +.... ..
T Consensus 6 k~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~----~~--~~~~~~~~~D~~d~~~~~~~~-----~~ 73 (221)
T 3r6d_A 6 XYITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI----ID--HERVTVIEGSFQNPGXLEQAV-----TN 73 (221)
T ss_dssp SEEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH----HT--STTEEEEECCTTCHHHHHHHH-----TT
T ss_pred EEEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc----cC--CCceEEEECCCCCHHHHHHHH-----cC
Confidence 4688888 56777777776543 4679999999876 432221 11 23589999998752 33332 46
Q ss_pred EEEEEEeCCccchHHHHHHHHccCC
Q 023645 196 YDFAFVDAEKRMYQEYFELLLQLIR 220 (279)
Q Consensus 196 fDlI~id~~~~~~~~~l~~~~~~Lk 220 (279)
+|+||......+.. .+.+.+.++
T Consensus 74 ~d~vv~~ag~~n~~--~~~~~~~~~ 96 (221)
T 3r6d_A 74 AEVVFVGAMESGSD--MASIVKALS 96 (221)
T ss_dssp CSEEEESCCCCHHH--HHHHHHHHH
T ss_pred CCEEEEcCCCCChh--HHHHHHHHH
Confidence 89999877643332 344444443
No 452
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=84.67 E-value=4.1 Score=34.09 Aligned_cols=86 Identities=16% Similarity=0.160 Sum_probs=56.4
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
..+++||-.|+ +|..+..+++.+. .+.+|+.++.+++..+...+.++..+...++.++.+|..+. +..+.+.- .
T Consensus 30 l~~k~vlVTGa-sggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 30 WRDRLALVTGA-SGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp GTTCEEEEEST-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 35678888884 5677777776542 35799999999887776666666666555688889998642 22211100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+.+|+||..+.
T Consensus 109 ~g~iD~vi~~Ag 120 (279)
T 1xg5_A 109 HSGVDICINNAG 120 (279)
T ss_dssp HCCCSEEEECCC
T ss_pred CCCCCEEEECCC
Confidence 147899987654
No 453
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=84.58 E-value=4.5 Score=35.64 Aligned_cols=71 Identities=15% Similarity=0.124 Sum_probs=47.9
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh--HHHHHHhCCCCCcEE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD--SLKALILNGEASSYD 197 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~--~l~~~~~~~~~~~fD 197 (279)
.++|+-+|| |..+..+++.+.....|+..|.+.+.++.+++ .+..+..|+.+ .+..+. .+.|
T Consensus 16 ~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~---------~~~~~~~d~~d~~~l~~~~-----~~~D 79 (365)
T 3abi_A 16 HMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKE---------FATPLKVDASNFDKLVEVM-----KEFE 79 (365)
T ss_dssp CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTT---------TSEEEECCTTCHHHHHHHH-----TTCS
T ss_pred ccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhc---------cCCcEEEecCCHHHHHHHH-----hCCC
Confidence 458999998 77777777777667899999999877655432 24455566643 344432 5679
Q ss_pred EEEEeCCcc
Q 023645 198 FAFVDAEKR 206 (279)
Q Consensus 198 lI~id~~~~ 206 (279)
+|+.-.+..
T Consensus 80 vVi~~~p~~ 88 (365)
T 3abi_A 80 LVIGALPGF 88 (365)
T ss_dssp EEEECCCGG
T ss_pred EEEEecCCc
Confidence 888765533
No 454
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=84.43 E-value=1.2 Score=49.46 Aligned_cols=103 Identities=9% Similarity=0.078 Sum_probs=65.6
Q ss_pred hhcCCCEEEEEcC--ccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCC
Q 023645 116 QILGAQRCIEVGV--YTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 116 ~~~~~~~VLEiG~--G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
...++.+||-.|. |.|..++.+++.. +++|++++.+++..+.+++.+...|... ++...-.++...+....+.
T Consensus 1664 ~l~~Ge~VLI~gaaGgVG~aAiqlAk~~--Ga~Viat~~s~~k~~~l~~~~~~lga~~---v~~~~~~~~~~~i~~~t~g 1738 (2512)
T 2vz8_A 1664 RMQPGESVLIHSGSGGVGQAAIAIALSR--GCRVFTTVGSAEKRAYLQARFPQLDETC---FANSRDTSFEQHVLRHTAG 1738 (2512)
T ss_dssp CCCTTCEEEETTTTSHHHHHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTCCSTT---EEESSSSHHHHHHHHTTTS
T ss_pred cCCCCCEEEEEeCChHHHHHHHHHHHHc--CCEEEEEeCChhhhHHHHhhcCCCCceE---EecCCCHHHHHHHHHhcCC
Confidence 3457789999864 4566777788876 4799999999888777766443233322 1211112223333222123
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
..+|+|+-... ...++...+.|++||.++.
T Consensus 1739 ~GvDvVld~~g----~~~l~~~l~~L~~~Gr~V~ 1768 (2512)
T 2vz8_A 1739 KGVDLVLNSLA----EEKLQASVRCLAQHGRFLE 1768 (2512)
T ss_dssp CCEEEEEECCC----HHHHHHHHTTEEEEEEEEE
T ss_pred CCceEEEECCC----chHHHHHHHhcCCCcEEEE
Confidence 46999885432 3568889999999998876
No 455
>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}
Probab=84.37 E-value=4.2 Score=37.29 Aligned_cols=72 Identities=19% Similarity=0.264 Sum_probs=50.6
Q ss_pred CCEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh--HHHHHHhCCCCCcE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD--SLKALILNGEASSY 196 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~--~l~~~~~~~~~~~f 196 (279)
.++|+=+|| |..+..+++.+.. +..|+.+|.+++.++.+.+.+ .+..++||+.+ .+... +-+..
T Consensus 3 ~M~iiI~G~--G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~-------~~~~i~Gd~~~~~~L~~A----gi~~a 69 (461)
T 4g65_A 3 AMKIIILGA--GQVGGTLAENLVGENNDITIVDKDGDRLRELQDKY-------DLRVVNGHASHPDVLHEA----GAQDA 69 (461)
T ss_dssp CEEEEEECC--SHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHS-------SCEEEESCTTCHHHHHHH----TTTTC
T ss_pred cCEEEEECC--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhc-------CcEEEEEcCCCHHHHHhc----CCCcC
Confidence 457777666 7888889988753 457999999999887665543 26788999865 33332 14678
Q ss_pred EEEEEeCC
Q 023645 197 DFAFVDAE 204 (279)
Q Consensus 197 DlI~id~~ 204 (279)
|+++.-.+
T Consensus 70 d~~ia~t~ 77 (461)
T 4g65_A 70 DMLVAVTN 77 (461)
T ss_dssp SEEEECCS
T ss_pred CEEEEEcC
Confidence 88876443
No 456
>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*
Probab=83.90 E-value=2.8 Score=38.93 Aligned_cols=88 Identities=10% Similarity=0.076 Sum_probs=53.2
Q ss_pred hcCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCc
Q 023645 117 ILGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASS 195 (279)
Q Consensus 117 ~~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~ 195 (279)
...+++|+-+|+|. |......++.+ +.+|+++|.++...+.+++ .|. ++ .+..+ . -..
T Consensus 271 ~l~GktV~IiG~G~IG~~~A~~lka~--Ga~Viv~d~~~~~~~~A~~----~Ga----~~--~~l~e----~-----l~~ 329 (494)
T 3ce6_A 271 LIGGKKVLICGYGDVGKGCAEAMKGQ--GARVSVTEIDPINALQAMM----EGF----DV--VTVEE----A-----IGD 329 (494)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSCHHHHHHHHH----TTC----EE--CCHHH----H-----GGG
T ss_pred CCCcCEEEEEccCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCC----EE--ecHHH----H-----HhC
Confidence 35678999999852 33333444444 4699999999987655543 343 22 23222 2 246
Q ss_pred EEEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 196 YDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 196 fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
.|+|+......... -....+.+|+||+++.
T Consensus 330 aDvVi~atgt~~~i--~~~~l~~mk~ggilvn 359 (494)
T 3ce6_A 330 ADIVVTATGNKDII--MLEHIKAMKDHAILGN 359 (494)
T ss_dssp CSEEEECSSSSCSB--CHHHHHHSCTTCEEEE
T ss_pred CCEEEECCCCHHHH--HHHHHHhcCCCcEEEE
Confidence 79998765433211 1245677899998875
No 457
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=83.85 E-value=7.4 Score=32.31 Aligned_cols=81 Identities=17% Similarity=0.122 Sum_probs=55.1
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HH----HHHhC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LK----ALILN 190 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~----~~~~~ 190 (279)
..++++|-.|++.| ++..+++.+ ..+.+|+.++.+++..+.+.+.+...+ .++.++.+|..+. +. ...+.
T Consensus 9 l~~k~vlVTGas~g-IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~ 85 (264)
T 3ucx_A 9 LTDKVVVISGVGPA-LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTG--RRALSVGTDITDDAQVAHLVDETMKA 85 (264)
T ss_dssp TTTCEEEEESCCTT-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCcEEEEECCCcH-HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45678998887654 555555544 236799999999988877777776654 4588999998652 22 22111
Q ss_pred CCCCcEEEEEEeC
Q 023645 191 GEASSYDFAFVDA 203 (279)
Q Consensus 191 ~~~~~fDlI~id~ 203 (279)
.+++|+++.++
T Consensus 86 --~g~id~lv~nA 96 (264)
T 3ucx_A 86 --YGRVDVVINNA 96 (264)
T ss_dssp --TSCCSEEEECC
T ss_pred --cCCCcEEEECC
Confidence 25799998775
No 458
>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*
Probab=83.49 E-value=5.7 Score=33.11 Aligned_cols=78 Identities=22% Similarity=0.205 Sum_probs=46.7
Q ss_pred CCEEEEEcCccCHHHHHHHHHCC--CCCEEEEEeCCh-------------------hHHHHHHHHHHHhCCCCcEEEEEc
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLP--ESGCLVACERDA-------------------RSLEVAKKYYERAGVSHKVKIKHG 178 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~--~~~~v~~iD~s~-------------------~~~~~a~~~~~~~g~~~~v~~~~g 178 (279)
..+|+-+||| ..+..++..+. .-++++.+|.+. ...+.+++.+...+..-+++.+..
T Consensus 31 ~~~VlVvG~G--g~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~ 108 (249)
T 1jw9_B 31 DSRVLIVGLG--GLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNA 108 (249)
T ss_dssp HCEEEEECCS--HHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECS
T ss_pred CCeEEEEeeC--HHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEec
Confidence 3589999996 33333333221 025999999987 667777777776554334566554
Q ss_pred Chhh-HHHHHHhCCCCCcEEEEEEeCC
Q 023645 179 LAAD-SLKALILNGEASSYDFAFVDAE 204 (279)
Q Consensus 179 d~~~-~l~~~~~~~~~~~fDlI~id~~ 204 (279)
+..+ .+..+ -..+|+|+...+
T Consensus 109 ~~~~~~~~~~-----~~~~DvVi~~~d 130 (249)
T 1jw9_B 109 LLDDAELAAL-----IAEHDLVLDCTD 130 (249)
T ss_dssp CCCHHHHHHH-----HHTSSEEEECCS
T ss_pred cCCHhHHHHH-----HhCCCEEEEeCC
Confidence 4432 22222 146899986554
No 459
>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}
Probab=83.48 E-value=1.3 Score=40.07 Aligned_cols=42 Identities=19% Similarity=0.200 Sum_probs=32.3
Q ss_pred CCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHHH
Q 023645 119 GAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAKK 162 (279)
Q Consensus 119 ~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~ 162 (279)
++.+|+-+|+|. |..+..++..+ +++|+.+|.++...+.+++
T Consensus 189 ~~~kV~ViG~G~iG~~aa~~a~~l--Ga~V~v~D~~~~~l~~~~~ 231 (405)
T 4dio_A 189 PAAKIFVMGAGVAGLQAIATARRL--GAVVSATDVRPAAKEQVAS 231 (405)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT--TCEEEEECSSTTHHHHHHH
T ss_pred CCCEEEEECCcHHHHHHHHHHHHC--CCEEEEEcCCHHHHHHHHH
Confidence 578999999973 55555666666 4799999999988776654
No 460
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=82.98 E-value=7.8 Score=32.08 Aligned_cols=85 Identities=13% Similarity=0.025 Sum_probs=51.5
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--CC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~~ 193 (279)
.++++|-.|+ +|..+..+++.+. .+.+|+.++.+++..+.+.+.+.......++.++.+|..+. +....+.- ..
T Consensus 6 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 84 (267)
T 2gdz_A 6 NGKVALVTGA-AQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHF 84 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHc
Confidence 4568888885 5667777766542 35799999999876655444443211123588899998642 22211100 02
Q ss_pred CcEEEEEEeCC
Q 023645 194 SSYDFAFVDAE 204 (279)
Q Consensus 194 ~~fDlI~id~~ 204 (279)
+++|+++..+.
T Consensus 85 g~id~lv~~Ag 95 (267)
T 2gdz_A 85 GRLDILVNNAG 95 (267)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46899988764
No 461
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=82.97 E-value=5.6 Score=33.39 Aligned_cols=82 Identities=16% Similarity=0.064 Sum_probs=56.6
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH------HHHHHhC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS------LKALILN 190 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~------l~~~~~~ 190 (279)
..++.+|--|.+. .++..+++.+. .+++|+.+|.+++.++.+.+.+...|. ++..+.+|..+. .....+.
T Consensus 7 L~gKvalVTGas~-GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~--~~~~~~~Dv~~~~~v~~~~~~~~~~ 83 (255)
T 4g81_D 7 LTGKTALVTGSAR-GLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY--DAHGVAFDVTDELAIEAAFSKLDAE 83 (255)
T ss_dssp CTTCEEEETTCSS-HHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC--CEEECCCCTTCHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC--cEEEEEeeCCCHHHHHHHHHHHHHH
Confidence 3577888878654 45666666553 367999999999988887777776653 588888887542 2222222
Q ss_pred CCCCcEEEEEEeCC
Q 023645 191 GEASSYDFAFVDAE 204 (279)
Q Consensus 191 ~~~~~fDlI~id~~ 204 (279)
-++.|+++.++.
T Consensus 84 --~G~iDiLVNNAG 95 (255)
T 4g81_D 84 --GIHVDILINNAG 95 (255)
T ss_dssp --TCCCCEEEECCC
T ss_pred --CCCCcEEEECCC
Confidence 368999987653
No 462
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=82.95 E-value=4 Score=34.50 Aligned_cols=89 Identities=17% Similarity=0.193 Sum_probs=54.2
Q ss_pred CCEEEEEcCccCHHHHHHHHHCC---CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 120 AQRCIEVGVYTGYSSLAIALVLP---ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 120 ~~~VLEiG~G~G~~t~~la~~~~---~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
.++|.=||+| ..+..++..+. .+.+|+++|.+++..+.+++ .|... . ...+..+. -...
T Consensus 6 ~~~I~iIG~G--~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~----~g~~~--~-~~~~~~~~---------~~~a 67 (290)
T 3b1f_A 6 EKTIYIAGLG--LIGASLALGIKRDHPHYKIVGYNRSDRSRDIALE----RGIVD--E-ATADFKVF---------AALA 67 (290)
T ss_dssp CCEEEEECCS--HHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHH----TTSCS--E-EESCTTTT---------GGGC
T ss_pred cceEEEEeeC--HHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHH----cCCcc--c-ccCCHHHh---------hcCC
Confidence 3578888875 44444443321 13589999999877655433 34321 1 12222211 1357
Q ss_pred EEEEEeCCccchHHHHHHHHcc-CCCCcEEE
Q 023645 197 DFAFVDAEKRMYQEYFELLLQL-IRVGGIIV 226 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~-Lk~gG~lv 226 (279)
|+||+..+.......++.+.+. +++|.+++
T Consensus 68 DvVilavp~~~~~~v~~~l~~~~l~~~~ivi 98 (290)
T 3b1f_A 68 DVIILAVPIKKTIDFIKILADLDLKEDVIIT 98 (290)
T ss_dssp SEEEECSCHHHHHHHHHHHHTSCCCTTCEEE
T ss_pred CEEEEcCCHHHHHHHHHHHHhcCCCCCCEEE
Confidence 9999887766667788888888 88876555
No 463
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=82.89 E-value=7.1 Score=32.84 Aligned_cols=81 Identities=19% Similarity=0.136 Sum_probs=49.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
..++++|-.|++. .++..+++.+ ..+.+|+.+|.+++..+.+.+.+ + .++.++.+|..+. +..+.++- .
T Consensus 27 l~gk~vlVTGas~-gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~--~~~~~~~~Dv~d~~~v~~~~~~~~~~ 100 (277)
T 3gvc_A 27 LAGKVAIVTGAGA-GIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G--CGAAACRVDVSDEQQIIAMVDACVAA 100 (277)
T ss_dssp CTTCEEEETTTTS-THHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C--SSCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C--CcceEEEecCCCHHHHHHHHHHHHHH
Confidence 3567888888654 4555555544 23679999999987765554433 2 3578888888652 11111100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
-+.+|+++.++.
T Consensus 101 ~g~iD~lvnnAg 112 (277)
T 3gvc_A 101 FGGVDKLVANAG 112 (277)
T ss_dssp HSSCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899987654
No 464
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=82.75 E-value=1.1 Score=40.02 Aligned_cols=79 Identities=15% Similarity=0.099 Sum_probs=46.9
Q ss_pred cCCCEEEEEcCccC---HHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCC
Q 023645 118 LGAQRCIEVGVYTG---YSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEAS 194 (279)
Q Consensus 118 ~~~~~VLEiG~G~G---~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~ 194 (279)
.++.+||-+|.|+| ..+..+++.. +++|++++.+++..+.+++ .|...-+.....+..+.+..... ..
T Consensus 169 ~~g~~vlV~gag~G~vG~~a~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----lGa~~~~~~~~~~~~~~v~~~t~---~~ 239 (379)
T 3iup_A 169 LEGHSALVHTAAASNLGQMLNQICLKD--GIKLVNIVRKQEQADLLKA----QGAVHVCNAASPTFMQDLTEALV---ST 239 (379)
T ss_dssp HTTCSCEEESSTTSHHHHHHHHHHHHH--TCCEEEEESSHHHHHHHHH----TTCSCEEETTSTTHHHHHHHHHH---HH
T ss_pred cCCCEEEEECCCCCHHHHHHHHHHHHC--CCEEEEEECCHHHHHHHHh----CCCcEEEeCCChHHHHHHHHHhc---CC
Confidence 56778998865544 4555666665 4689999999988877764 45443222222333333333211 23
Q ss_pred cEEEEEEeCCc
Q 023645 195 SYDFAFVDAEK 205 (279)
Q Consensus 195 ~fDlI~id~~~ 205 (279)
.+|+||-....
T Consensus 240 g~d~v~d~~g~ 250 (379)
T 3iup_A 240 GATIAFDATGG 250 (379)
T ss_dssp CCCEEEESCEE
T ss_pred CceEEEECCCc
Confidence 69988855443
No 465
>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*
Probab=82.71 E-value=1.2 Score=40.13 Aligned_cols=42 Identities=14% Similarity=0.207 Sum_probs=30.9
Q ss_pred cCCCEEEEEcCcc-CHHHHHHHHHCCCCCEEEEEeCChhHHHHHH
Q 023645 118 LGAQRCIEVGVYT-GYSSLAIALVLPESGCLVACERDARSLEVAK 161 (279)
Q Consensus 118 ~~~~~VLEiG~G~-G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~ 161 (279)
.++.+|+-+|+|. |..+..++..++ .+|+.+|.+++..+.++
T Consensus 170 l~g~~V~ViGaG~iG~~aa~~a~~~G--a~V~v~D~~~~~~~~~~ 212 (401)
T 1x13_A 170 VPPAKVMVIGAGVAGLAAIGAANSLG--AIVRAFDTRPEVKEQVQ 212 (401)
T ss_dssp ECCCEEEEECCSHHHHHHHHHHHHTT--CEEEEECSCGGGHHHHH
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHH
Confidence 4678999999863 444555666664 69999999998776653
No 466
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=82.60 E-value=5.7 Score=32.76 Aligned_cols=85 Identities=16% Similarity=0.037 Sum_probs=54.5
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCC-CcEEEEEcChhhH--HHHHHhCC--C
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
.++++|-.|++ |..+..+++.+. .+.+|+.++.+++..+.+.+.+...+.. .++.++.+|..+. ...+.++- .
T Consensus 6 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (250)
T 3nyw_A 6 QKGLAIITGAS-QGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK 84 (250)
T ss_dssp CCCEEEEESTT-SHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence 46788888865 555666665542 2579999999998887777766654322 4588888988652 11111100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+.+|+++.++.
T Consensus 85 ~g~iD~lvnnAg 96 (250)
T 3nyw_A 85 YGAVDILVNAAA 96 (250)
T ss_dssp HCCEEEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257999998764
No 467
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=82.39 E-value=3.4 Score=37.08 Aligned_cols=45 Identities=18% Similarity=0.071 Sum_probs=35.0
Q ss_pred CEEEEEcCccCHHHHHHHHHCC------CCCEEEEEeCChhHHHHHHHHHH
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP------ESGCLVACERDARSLEVAKKYYE 165 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~------~~~~v~~iD~s~~~~~~a~~~~~ 165 (279)
-.|+|+|.|.|..+.-+++.+. ...+++.||+|+...+.-++.+.
T Consensus 82 ~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~ 132 (387)
T 1zkd_A 82 LRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLA 132 (387)
T ss_dssp EEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHST
T ss_pred cEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhc
Confidence 3799999999999988876542 23589999999988776555553
No 468
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=82.21 E-value=6.2 Score=32.81 Aligned_cols=85 Identities=14% Similarity=0.099 Sum_probs=54.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--CC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~~ 193 (279)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++..+.+.+.+....-..++.++.+|..+. ...+.+.- .-
T Consensus 7 ~~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (265)
T 3lf2_A 7 SEAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTL 85 (265)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 46788888865 456666665542 36799999999988877776666532233488999998652 11111100 02
Q ss_pred CcEEEEEEeCC
Q 023645 194 SSYDFAFVDAE 204 (279)
Q Consensus 194 ~~fDlI~id~~ 204 (279)
++.|+++.++.
T Consensus 86 g~id~lvnnAg 96 (265)
T 3lf2_A 86 GCASILVNNAG 96 (265)
T ss_dssp CSCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 57899987654
No 469
>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}
Probab=82.19 E-value=1.8 Score=36.83 Aligned_cols=87 Identities=18% Similarity=0.125 Sum_probs=53.3
Q ss_pred CEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFA 199 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI 199 (279)
++|.=||+ |..+..++..+. .+.+|+++|.+++..+.+.+. | +.. ..+..+.. ...|+|
T Consensus 2 ~~i~iIG~--G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~~----g----~~~-~~~~~~~~---------~~aDvv 61 (287)
T 3pef_A 2 QKFGFIGL--GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELAAL----G----AER-AATPCEVV---------ESCPVT 61 (287)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHHHT----T----CEE-CSSHHHHH---------HHCSEE
T ss_pred CEEEEEee--cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHHHC----C----Cee-cCCHHHHH---------hcCCEE
Confidence 46777887 556666555442 246899999999876655432 2 222 12333222 245899
Q ss_pred EEeCC-ccchHHHH---HHHHccCCCCcEEEE
Q 023645 200 FVDAE-KRMYQEYF---ELLLQLIRVGGIIVI 227 (279)
Q Consensus 200 ~id~~-~~~~~~~l---~~~~~~Lk~gG~lv~ 227 (279)
|+..+ .......+ +.+.+.+++|.+++-
T Consensus 62 i~~vp~~~~~~~v~~~~~~l~~~l~~~~~vi~ 93 (287)
T 3pef_A 62 FAMLADPAAAEEVCFGKHGVLEGIGEGRGYVD 93 (287)
T ss_dssp EECCSSHHHHHHHHHSTTCHHHHCCTTCEEEE
T ss_pred EEEcCCHHHHHHHHcCcchHhhcCCCCCEEEe
Confidence 88766 34555666 667788888876553
No 470
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=82.03 E-value=7.6 Score=32.05 Aligned_cols=83 Identities=16% Similarity=0.167 Sum_probs=55.6
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC-CCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG-EAS 194 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~-~~~ 194 (279)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++..+.+.+.++..+ .++.++.+|..+. +..+.+.- +.+
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~~~~~~~g 82 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG--GRIVARSLDARNEDEVTAFLNAADAHA 82 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT--CEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CeEEEEECcCCCHHHHHHHHHHHHhhC
Confidence 46788888865 556666666542 35799999999988887777776654 4689999998652 22221110 015
Q ss_pred cEEEEEEeCC
Q 023645 195 SYDFAFVDAE 204 (279)
Q Consensus 195 ~fDlI~id~~ 204 (279)
.+|+++.++.
T Consensus 83 ~id~lv~nAg 92 (252)
T 3h7a_A 83 PLEVTIFNVG 92 (252)
T ss_dssp CEEEEEECCC
T ss_pred CceEEEECCC
Confidence 7999987754
No 471
>3trk_A Nonstructural polyprotein; hydrolase; 2.40A {Chikungunya virus}
Probab=81.98 E-value=1.1 Score=38.01 Aligned_cols=39 Identities=23% Similarity=0.455 Sum_probs=27.4
Q ss_pred CcEEEEEEeCC----ccchHHHH----------HHHHccCCCCcEEEEeCCCC
Q 023645 194 SSYDFAFVDAE----KRMYQEYF----------ELLLQLIRVGGIIVIDNVLW 232 (279)
Q Consensus 194 ~~fDlI~id~~----~~~~~~~l----------~~~~~~Lk~gG~lv~dd~~~ 232 (279)
++||+||++.. .++|.+.- ..+...|+|||.+++...-+
T Consensus 210 grYDlVfvNv~TpyR~HHYQQCeDHA~~l~mL~~~al~~L~pGGtlv~~aYGy 262 (324)
T 3trk_A 210 GRYDLVVINIHTPFRIHHYQQCVDHAMKLQMLGGDSLRLLKPGGSLLIRAYGY 262 (324)
T ss_dssp CCEEEEEEECCCCCCSSHHHHHHHHHHHHHHHHHHGGGGEEEEEEEEEEECCC
T ss_pred CceeEEEEecCCccccchHHHHHHHHHHHHHHHHHHHhhcCCCceEEEEeecc
Confidence 89999999865 33343322 23358899999999976644
No 472
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=81.85 E-value=17 Score=28.55 Aligned_cols=68 Identities=15% Similarity=0.017 Sum_probs=46.1
Q ss_pred EEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEE
Q 023645 122 RCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAF 200 (279)
Q Consensus 122 ~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~ 200 (279)
+||-+| |+|..+..+++.+- .+.+|++++.+++..... . ..++++.+|..+..... -..+|.||
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-------~--~~~~~~~~D~~d~~~~~-----~~~~d~vi 66 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-------H--KDINILQKDIFDLTLSD-----LSDQNVVV 66 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-------C--SSSEEEECCGGGCCHHH-----HTTCSEEE
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-------c--CCCeEEeccccChhhhh-----hcCCCEEE
Confidence 678777 56777877776652 357999999998654321 1 35899999987642222 25689998
Q ss_pred EeCC
Q 023645 201 VDAE 204 (279)
Q Consensus 201 id~~ 204 (279)
..+.
T Consensus 67 ~~ag 70 (221)
T 3ew7_A 67 DAYG 70 (221)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 7654
No 473
>3vtf_A UDP-glucose 6-dehydrogenase; two discrete alpha/beta domains, oxidoreducta; HET: UPG; 2.00A {Pyrobaculum islandicum}
Probab=81.67 E-value=2 Score=39.42 Aligned_cols=103 Identities=17% Similarity=0.191 Sum_probs=57.2
Q ss_pred CEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHH------------HHHhCCCCcEEEEEcChhhHHHHH
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKY------------YERAGVSHKVKIKHGLAADSLKAL 187 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~------------~~~~g~~~~v~~~~gd~~~~l~~~ 187 (279)
.+|--||+ |+.++.++..+. .+.+|+|+|++++.++..++. +++.--..++++. .|..+.+
T Consensus 22 ~~IaViGl--GYVGLp~A~~~A~~G~~V~g~Did~~kV~~ln~G~~pi~Epgl~ell~~~~~~g~l~~t-t~~~~ai--- 95 (444)
T 3vtf_A 22 ASLSVLGL--GYVGVVHAVGFALLGHRVVGYDVNPSIVERLRAGRPHIYEPGLEEALGRALSSGRLSFA-ESAEEAV--- 95 (444)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEC-SSHHHHH---
T ss_pred CEEEEEcc--CHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHCCCCCCCCCCHHHHHHHHHHcCCeeEE-cCHHHHH---
Confidence 37777776 666655544432 246999999999887665431 1111001223332 2222211
Q ss_pred HhCCCCCcEEEEEEeCC----------ccchHHHHHHHHccCCC---CcEEEEeCCCCCCc
Q 023645 188 ILNGEASSYDFAFVDAE----------KRMYQEYFELLLQLIRV---GGIIVIDNVLWHGK 235 (279)
Q Consensus 188 ~~~~~~~~fDlI~id~~----------~~~~~~~l~~~~~~Lk~---gG~lv~dd~~~~g~ 235 (279)
..-|++|+..+ ........+.+.+.|++ |-++|+.....+|.
T Consensus 96 ------~~ad~~~I~VpTP~~~d~~~Dl~~v~~a~~~I~~~l~~~~~g~lVV~eSTVppGt 150 (444)
T 3vtf_A 96 ------AATDATFIAVGTPPAPDGSADLRYVEAAARAVGRGIRAKGRWHLVVVKSTVPPGT 150 (444)
T ss_dssp ------HTSSEEEECCCCCBCTTSSBCCHHHHHHHHHHHHHHHHHCSCCEEEECSCCCTTT
T ss_pred ------hcCCceEEEecCCCCCCCCCCcHHHHHHHHHHHHHHhhcCCCeEEEEeCCCCCch
Confidence 23466666432 12244556666777774 45888888888886
No 474
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=81.64 E-value=7.7 Score=32.38 Aligned_cols=83 Identities=20% Similarity=0.133 Sum_probs=49.1
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEE-eCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVAC-ERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~i-D~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
.++++|-.|++ |.++..+++.+. .+.+|+.+ ..+++..+...+.++..+ .++.++.+|..+. +..+.++- .
T Consensus 26 ~~k~~lVTGas-~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dl~~~~~v~~~~~~~~~~ 102 (267)
T 3u5t_A 26 TNKVAIVTGAS-RGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAG--GKALTAQADVSDPAAVRRLFATAEEA 102 (267)
T ss_dssp -CCEEEEESCS-SHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC--CeEEEEEcCCCCHHHHHHHHHHHHHH
Confidence 46788888865 555666655542 25688776 445556666666565544 3588889988642 22211100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+.+|+++.++.
T Consensus 103 ~g~iD~lvnnAG 114 (267)
T 3u5t_A 103 FGGVDVLVNNAG 114 (267)
T ss_dssp HSCEEEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 258999988754
No 475
>2qyt_A 2-dehydropantoate 2-reductase; APC81190, porphyromonas gingi W83, structural genomics, PSI-2; HET: MSE; 2.15A {Porphyromonas gingivalis}
Probab=81.62 E-value=1.5 Score=37.57 Aligned_cols=34 Identities=9% Similarity=0.066 Sum_probs=27.1
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
..+|+||+........+.++.+.+.++++.+++.
T Consensus 82 ~~~D~vil~vk~~~~~~v~~~i~~~l~~~~~iv~ 115 (317)
T 2qyt_A 82 GTVDYILFCTKDYDMERGVAEIRPMIGQNTKILP 115 (317)
T ss_dssp CCEEEEEECCSSSCHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCCEEEEecCcccHHHHHHHHHhhcCCCCEEEE
Confidence 5799999987766778888888888888776554
No 476
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=81.57 E-value=3.5 Score=35.94 Aligned_cols=77 Identities=16% Similarity=0.146 Sum_probs=52.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCC--CC-EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCC
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPE--SG-CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGE 192 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~--~~-~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~ 192 (279)
...++||-.| |+|..+..+++.+-. +. +|++++.++.......+.+. ..+++++.+|..+. +...
T Consensus 19 ~~~k~vlVTG-atG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~----~~~v~~~~~Dl~d~~~l~~~----- 88 (344)
T 2gn4_A 19 LDNQTILITG-GTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN----DPRMRFFIGDVRDLERLNYA----- 88 (344)
T ss_dssp TTTCEEEEET-TTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC----CTTEEEEECCTTCHHHHHHH-----
T ss_pred hCCCEEEEEC-CCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc----CCCEEEEECCCCCHHHHHHH-----
Confidence 4567899887 578888888776532 34 89999998876554444332 24689999998753 3333
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
-..+|.||..+.
T Consensus 89 ~~~~D~Vih~Aa 100 (344)
T 2gn4_A 89 LEGVDICIHAAA 100 (344)
T ss_dssp TTTCSEEEECCC
T ss_pred HhcCCEEEECCC
Confidence 246899998765
No 477
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=81.51 E-value=8.3 Score=31.42 Aligned_cols=81 Identities=14% Similarity=0.124 Sum_probs=55.0
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HH----HHHhCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LK----ALILNG 191 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~----~~~~~~ 191 (279)
.++++|-.|+ +|..+..+++.+. .+.+|+.++.+++..+...+.++..+ .++.++.+|..+. +. .....
T Consensus 4 ~~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~- 79 (247)
T 3lyl_A 4 NEKVALVTGA-SRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKG--FKARGLVLNISDIESIQNFFAEIKAE- 79 (247)
T ss_dssp TTCEEEESSC-SSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTT--CCEEEEECCTTCHHHHHHHHHHHHHT-
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CceEEEEecCCCHHHHHHHHHHHHHH-
Confidence 3567888774 5666666666542 35799999999988877777776655 3589999998642 22 22221
Q ss_pred CCCcEEEEEEeCC
Q 023645 192 EASSYDFAFVDAE 204 (279)
Q Consensus 192 ~~~~fDlI~id~~ 204 (279)
.+++|+++..+.
T Consensus 80 -~~~id~li~~Ag 91 (247)
T 3lyl_A 80 -NLAIDILVNNAG 91 (247)
T ss_dssp -TCCCSEEEECCC
T ss_pred -cCCCCEEEECCC
Confidence 357899987754
No 478
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=81.39 E-value=4.6 Score=34.80 Aligned_cols=80 Identities=9% Similarity=0.074 Sum_probs=50.9
Q ss_pred CCCEEEEEcCccCHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCC---CcEEEEEcChhhH--HHHHHhCCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVS---HKVKIKHGLAADS--LKALILNGE 192 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~---~~v~~~~gd~~~~--l~~~~~~~~ 192 (279)
..++||-.| |+|+.+..+++.+ ..+.+|++++.++.........+...... .+++++.+|..+. +...
T Consensus 24 ~~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~----- 97 (351)
T 3ruf_A 24 SPKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQV----- 97 (351)
T ss_dssp SCCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHH-----
T ss_pred CCCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHH-----
Confidence 467899888 6788888887765 23579999998654322222222221100 3589999998653 3333
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
-..+|.||..+.
T Consensus 98 ~~~~d~Vih~A~ 109 (351)
T 3ruf_A 98 MKGVDHVLHQAA 109 (351)
T ss_dssp TTTCSEEEECCC
T ss_pred hcCCCEEEECCc
Confidence 247899987664
No 479
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=81.19 E-value=6.8 Score=33.66 Aligned_cols=84 Identities=13% Similarity=0.157 Sum_probs=49.7
Q ss_pred CCCEEEEEcCc-cCHHH-HHHHHHCCCCCEEEEEeCCh------------------hHHHHHHHHHHHhCCCCcEEEEEc
Q 023645 119 GAQRCIEVGVY-TGYSS-LAIALVLPESGCLVACERDA------------------RSLEVAKKYYERAGVSHKVKIKHG 178 (279)
Q Consensus 119 ~~~~VLEiG~G-~G~~t-~~la~~~~~~~~v~~iD~s~------------------~~~~~a~~~~~~~g~~~~v~~~~g 178 (279)
...+||=|||| .|... ..|+.. + -++++.+|.+. ...+.+++.+...+..-+++.+..
T Consensus 35 ~~~~VlVvGaGGlGs~va~~La~a-G-VG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 35 RTFAVAIVGVGGVGSVTAEMLTRC-G-IGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGCEEEEECCSHHHHHHHHHHHHH-T-CSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred hCCeEEEECcCHHHHHHHHHHHHc-C-CCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence 45699999997 34433 334443 2 37999999876 566778888887665545666655
Q ss_pred Chh--hHHHHHHh----CC--CCCcEEEEEEeCC
Q 023645 179 LAA--DSLKALIL----NG--EASSYDFAFVDAE 204 (279)
Q Consensus 179 d~~--~~l~~~~~----~~--~~~~fDlI~id~~ 204 (279)
+.. +.+..+.. .. ....||+|+...+
T Consensus 113 ~l~~~~~~~~~~~~~~~~~l~~~~~~DlVid~~D 146 (292)
T 3h8v_A 113 NITTVENFQHFMDRISNGGLEEGKPVDLVLSCVD 146 (292)
T ss_dssp CTTSHHHHHHHHHHHHHBSSSTTBCCSEEEECCS
T ss_pred cCCcHHHHHHHhhhhcccccccCCCCCEEEECCc
Confidence 443 22222210 00 0147999985443
No 480
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=81.14 E-value=6.3 Score=33.05 Aligned_cols=85 Identities=11% Similarity=-0.005 Sum_probs=55.3
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCC-CcEEEEEcChhhH--HHHHHhCC--C
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVS-HKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~-~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
.+++||-.|. +|.++..+++.+. .+.+|+.++.+++..+.+.+.++..+.. .++.++.+|..+. +..+.++- .
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 88 (281)
T 3svt_A 10 QDRTYLVTGG-GSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAW 88 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 4678888885 4566666666542 3679999999998887777777654432 2688999998642 12111100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+++|+++.++.
T Consensus 89 ~g~id~lv~nAg 100 (281)
T 3svt_A 89 HGRLHGVVHCAG 100 (281)
T ss_dssp HSCCCEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 257899987654
No 481
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=80.95 E-value=9.7 Score=32.13 Aligned_cols=94 Identities=16% Similarity=0.186 Sum_probs=56.6
Q ss_pred CEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHh---------CCC--------CcEEEEEcChhh
Q 023645 121 QRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERA---------GVS--------HKVKIKHGLAAD 182 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~---------g~~--------~~v~~~~gd~~~ 182 (279)
++|.=||+| ..+..++..+. .+.+|+.+|.+++.++.+++.+... ++. .++++. .+..
T Consensus 5 ~kV~VIGaG--~mG~~iA~~la~~G~~V~l~d~~~~~~~~~~~~i~~~~~~~~~~g~~~~~~~~~~~~~~i~~~-~~~~- 80 (283)
T 4e12_A 5 TNVTVLGTG--VLGSQIAFQTAFHGFAVTAYDINTDALDAAKKRFEGLAAVYEKEVAGAADGAAQKALGGIRYS-DDLA- 80 (283)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHHHHHHHHHHHHSTTCTTTHHHHHHHHCEEE-SCHH-
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHHHHhcccCCHHHHHHHHcCeEEe-CCHH-
Confidence 578888875 44444444321 1569999999999888777654221 111 112221 2221
Q ss_pred HHHHHHhCCCCCcEEEEEEeCCcc--chHHHHHHHHccCCCCcEEE
Q 023645 183 SLKALILNGEASSYDFAFVDAEKR--MYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 183 ~l~~~~~~~~~~~fDlI~id~~~~--~~~~~l~~~~~~Lk~gG~lv 226 (279)
.. -...|+|+...... .....++.+.+.++++.+++
T Consensus 81 ---~~-----~~~aDlVi~av~~~~~~~~~v~~~l~~~~~~~~il~ 118 (283)
T 4e12_A 81 ---QA-----VKDADLVIEAVPESLDLKRDIYTKLGELAPAKTIFA 118 (283)
T ss_dssp ---HH-----TTTCSEEEECCCSCHHHHHHHHHHHHHHSCTTCEEE
T ss_pred ---HH-----hccCCEEEEeccCcHHHHHHHHHHHHhhCCCCcEEE
Confidence 11 25679998876543 45567788888888877654
No 482
>3tri_A Pyrroline-5-carboxylate reductase; amino acid biosynthesis, oxidoreductase; HET: NAP; 2.50A {Coxiella burnetii}
Probab=80.84 E-value=2 Score=36.50 Aligned_cols=87 Identities=13% Similarity=0.072 Sum_probs=54.7
Q ss_pred CEEEEEcCccCHHHHHHHHHCCC-CC---EEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPE-SG---CLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~-~~---~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
++|.=|||| ..+..++..+.. +. +|+.+|.+++..+.+.+. .| +.+ ..+..+. + ...
T Consensus 4 ~~I~iIG~G--~mG~aia~~l~~~g~~~~~V~v~dr~~~~~~~l~~~---~g----i~~-~~~~~~~---~------~~a 64 (280)
T 3tri_A 4 SNITFIGGG--NMARNIVVGLIANGYDPNRICVTNRSLDKLDFFKEK---CG----VHT-TQDNRQG---A------LNA 64 (280)
T ss_dssp SCEEEESCS--HHHHHHHHHHHHTTCCGGGEEEECSSSHHHHHHHHT---TC----CEE-ESCHHHH---H------SSC
T ss_pred CEEEEEccc--HHHHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHH---cC----CEE-eCChHHH---H------hcC
Confidence 468888884 455554443321 22 799999999876655442 23 332 2233222 1 457
Q ss_pred EEEEEeCCccchHHHHHHHHcc-CCCCcEEE
Q 023645 197 DFAFVDAEKRMYQEYFELLLQL-IRVGGIIV 226 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~-Lk~gG~lv 226 (279)
|+||+........+.++.+.+. ++++.+++
T Consensus 65 DvVilav~p~~~~~vl~~l~~~~l~~~~iii 95 (280)
T 3tri_A 65 DVVVLAVKPHQIKMVCEELKDILSETKILVI 95 (280)
T ss_dssp SEEEECSCGGGHHHHHHHHHHHHHTTTCEEE
T ss_pred CeEEEEeCHHHHHHHHHHHHhhccCCCeEEE
Confidence 9999988777778888888887 77765554
No 483
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=80.82 E-value=7.4 Score=32.27 Aligned_cols=85 Identities=18% Similarity=0.098 Sum_probs=53.6
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--CC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~~ 193 (279)
.++++|-.|+ +|..+..+++.+. .+.+|+.++.+++..+.+.+.+.......++.++.+|..+. +..+.++- ..
T Consensus 12 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 90 (267)
T 1iy8_A 12 TDRVVLITGG-GSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERF 90 (267)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4578888885 5666777666542 35799999999887766665555442224588889998642 22221100 02
Q ss_pred CcEEEEEEeCC
Q 023645 194 SSYDFAFVDAE 204 (279)
Q Consensus 194 ~~fDlI~id~~ 204 (279)
+.+|+++.++.
T Consensus 91 g~id~lv~nAg 101 (267)
T 1iy8_A 91 GRIDGFFNNAG 101 (267)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47899987754
No 484
>3t8y_A CHEB, chemotaxis response regulator protein-glutamate methylesterase; CHEA, hydrolase; 1.90A {Thermotoga maritima}
Probab=80.75 E-value=7.8 Score=29.27 Aligned_cols=96 Identities=13% Similarity=-0.021 Sum_probs=49.8
Q ss_pred CccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcEEEEEEeCCcc-
Q 023645 128 VYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSYDFAFVDAEKR- 206 (279)
Q Consensus 128 ~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~fDlI~id~~~~- 206 (279)
.|+++++....+......+|..+|-++...+..+..++..+.. .+.....+..+.+..+. ...+|+|++|....
T Consensus 9 ~~~~~~~~~~~~M~~~~~~ILivdd~~~~~~~l~~~L~~~~~~-~~v~~~~~~~~al~~l~----~~~~dlvilD~~l~~ 83 (164)
T 3t8y_A 9 HHSSGLVPRGSHMTDRVIRVLVVDDSAFMRMVLKDIIDSQPDM-KVVGFAKDGLEAVEKAI----ELKPDVITMDIEMPN 83 (164)
T ss_dssp ---------------CCEEEEEECSCHHHHHHHHHHHHTSTTE-EEEEEESSHHHHHHHHH----HHCCSEEEECSSCSS
T ss_pred cccCCcccCccccccCccEEEEEcCCHHHHHHHHHHHhcCCCe-EEEEecCCHHHHHHHhc----cCCCCEEEEeCCCCC
Confidence 4555555555554433468999999999998888888865421 12223556666555443 35699999996532
Q ss_pred -chHHHHHHHHccCCCCcEEEEeC
Q 023645 207 -MYQEYFELLLQLIRVGGIIVIDN 229 (279)
Q Consensus 207 -~~~~~l~~~~~~Lk~gG~lv~dd 229 (279)
+-.++++.+... .+--++++..
T Consensus 84 ~~g~~l~~~lr~~-~~~~ii~~s~ 106 (164)
T 3t8y_A 84 LNGIEALKLIMKK-APTRVIMVSS 106 (164)
T ss_dssp SCHHHHHHHHHHH-SCCEEEEEES
T ss_pred CCHHHHHHHHHhc-CCceEEEEec
Confidence 234555555443 2344555543
No 485
>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}
Probab=80.31 E-value=15 Score=27.19 Aligned_cols=87 Identities=11% Similarity=0.113 Sum_probs=50.9
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCCC-CCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEE-EcChhhHHHHHHhCCCCCc
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLPE-SGCLVACERDARSLEVAKKYYERAGVSHKVKIK-HGLAADSLKALILNGEASS 195 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~~-~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~-~gd~~~~l~~~~~~~~~~~ 195 (279)
..+++|+=||+ |..+..++..+.. +.+|+.+|.+++..+...+ ..+ +.+. ..+..+.+ ..
T Consensus 19 ~~~~~v~iiG~--G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~---~~~----~~~~~~~~~~~~~---------~~ 80 (144)
T 3oj0_A 19 NGGNKILLVGN--GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAE---KYE----YEYVLINDIDSLI---------KN 80 (144)
T ss_dssp HCCCEEEEECC--SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHH---HHT----CEEEECSCHHHHH---------HT
T ss_pred ccCCEEEEECC--CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHH---HhC----CceEeecCHHHHh---------cC
Confidence 34789999997 7788887777642 4579999999876544333 223 2222 22222222 35
Q ss_pred EEEEEEeCCccchHHHHHHHHccCCCCcEEE
Q 023645 196 YDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 196 fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
.|+|+...+.... .+. ...+++|++++
T Consensus 81 ~Divi~at~~~~~--~~~--~~~l~~g~~vi 107 (144)
T 3oj0_A 81 NDVIITATSSKTP--IVE--ERSLMPGKLFI 107 (144)
T ss_dssp CSEEEECSCCSSC--SBC--GGGCCTTCEEE
T ss_pred CCEEEEeCCCCCc--Eee--HHHcCCCCEEE
Confidence 7998876543321 111 25678866554
No 486
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=80.15 E-value=7.5 Score=31.83 Aligned_cols=83 Identities=22% Similarity=0.154 Sum_probs=55.2
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--CC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--EA 193 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~~ 193 (279)
.+++||-.|+ +|..+..+++.+. .+.+|+.++.+++..+...+.++..+ .++.++.+|..+. +..+.++- ..
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG--GTAISVAVDVSDPESAKAMADRTLAEF 84 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT--CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4678898885 4666766666542 35799999999988877777666544 4688999998652 22211100 02
Q ss_pred CcEEEEEEeCC
Q 023645 194 SSYDFAFVDAE 204 (279)
Q Consensus 194 ~~fDlI~id~~ 204 (279)
+.+|.++.++.
T Consensus 85 g~id~li~~Ag 95 (253)
T 3qiv_A 85 GGIDYLVNNAA 95 (253)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 47999998764
No 487
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=80.13 E-value=6.4 Score=33.06 Aligned_cols=81 Identities=22% Similarity=0.232 Sum_probs=53.3
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HH----HHHhCC
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LK----ALILNG 191 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~----~~~~~~ 191 (279)
.++++|-.|++ |.++..+++.+. .+.+|+.++.+++..+.+.+.+...+ .++.++.+|..+. +. ...+.
T Consensus 23 ~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~~- 98 (279)
T 3sju_A 23 RPQTAFVTGVS-SGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAG--HDVDGSSCDVTSTDEVHAAVAAAVER- 98 (279)
T ss_dssp --CEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTT--CCEEEEECCTTCHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHHHHHHHH-
Confidence 46788988855 556666666542 36799999999988777777666544 4589999998642 11 11111
Q ss_pred CCCcEEEEEEeCC
Q 023645 192 EASSYDFAFVDAE 204 (279)
Q Consensus 192 ~~~~fDlI~id~~ 204 (279)
-+++|+++.++.
T Consensus 99 -~g~id~lv~nAg 110 (279)
T 3sju_A 99 -FGPIGILVNSAG 110 (279)
T ss_dssp -HCSCCEEEECCC
T ss_pred -cCCCcEEEECCC
Confidence 257899987654
No 488
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=80.09 E-value=21 Score=29.54 Aligned_cols=83 Identities=13% Similarity=0.055 Sum_probs=49.1
Q ss_pred CCCEEEEEcCc-cCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 119 GAQRCIEVGVY-TGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 119 ~~~~VLEiG~G-~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
.+++||-.|++ +|.++..+++.+. .+.+|+.++.+++..+.+++..+..+ .+.++.+|..+. +..+.+.- .
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~ 81 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELN---SPYVYELDVSKEEHFKSLYNSVKKD 81 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTT---CCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC---CcEEEEcCCCCHHHHHHHHHHHHHH
Confidence 45789999975 2667777776653 35799999998763233333323223 267788887542 22211100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+.+|+++.++.
T Consensus 82 ~g~id~lv~nAg 93 (275)
T 2pd4_A 82 LGSLDFIVHSVA 93 (275)
T ss_dssp TSCEEEEEECCC
T ss_pred cCCCCEEEECCc
Confidence 257999988754
No 489
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=80.08 E-value=15 Score=30.78 Aligned_cols=81 Identities=20% Similarity=0.149 Sum_probs=51.3
Q ss_pred CCCEEEEEcCccCHHHHHHHHHC-CCCCEEEEEeCChh-------HHHHHHHHHHHhCCCCcEEEEEcChhhH--HHH--
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDAR-------SLEVAKKYYERAGVSHKVKIKHGLAADS--LKA-- 186 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~-~~~~~v~~iD~s~~-------~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~-- 186 (279)
.++++|-.|++ |.++..+++.+ ..+.+|+.++.+++ .++.+.+.++..+ .++.++.+|..+. +..
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~~~~~v~~~~ 84 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAG--GQALPIVGDIRDGDAVAAAV 84 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHT--SEEEEEECCTTSHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcC--CcEEEEECCCCCHHHHHHHH
Confidence 46788888865 55666666654 33579999999876 3444444455444 3588999998652 122
Q ss_pred --HHhCCCCCcEEEEEEeCC
Q 023645 187 --LILNGEASSYDFAFVDAE 204 (279)
Q Consensus 187 --~~~~~~~~~fDlI~id~~ 204 (279)
..+. .++.|+++.++.
T Consensus 85 ~~~~~~--~g~id~lvnnAg 102 (285)
T 3sc4_A 85 AKTVEQ--FGGIDICVNNAS 102 (285)
T ss_dssp HHHHHH--HSCCSEEEECCC
T ss_pred HHHHHH--cCCCCEEEECCC
Confidence 1111 257999987654
No 490
>1x0v_A GPD-C, GPDH-C, glycerol-3-phosphate dehydrogenase [NAD+], cytoplasmic; two independent domains, GXGXXG motif, oxidoreductase; 2.30A {Homo sapiens} PDB: 1x0x_A* 1wpq_A* 2pla_A*
Probab=80.06 E-value=3.4 Score=36.02 Aligned_cols=94 Identities=12% Similarity=0.061 Sum_probs=54.9
Q ss_pred CEEEEEcCccCHHHHHHHHHCCC-C-------CEEEEEeCChh-----HHHHHHHHHHHh----C--CCCcEEEEEcChh
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPE-S-------GCLVACERDAR-----SLEVAKKYYERA----G--VSHKVKIKHGLAA 181 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~-~-------~~v~~iD~s~~-----~~~~a~~~~~~~----g--~~~~v~~~~gd~~ 181 (279)
++|.-||+| ..+..++..+.. + .+|+.+|.+++ ..+..++.-... + +..++.+. .+..
T Consensus 9 mkI~iIG~G--~mG~~~a~~l~~~g~~~~~~~~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~ 85 (354)
T 1x0v_A 9 KKVCIVGSG--NWGSAIAKIVGGNAAQLAQFDPRVTMWVFEEDIGGKKLTEIINTQHENVKYLPGHKLPPNVVAV-PDVV 85 (354)
T ss_dssp EEEEEECCS--HHHHHHHHHHHHHHHHCTTEEEEEEEECCCCBSSSSBHHHHHHHHSCCTTTSTTCCCCTTEEEE-SSHH
T ss_pred CeEEEECCC--HHHHHHHHHHHhcCCcccCCCCeEEEEEcChhhhhhHHHHHHHhcCcccccCCcccCccCeEEE-cCHH
Confidence 478999885 444444433321 2 47999999987 555443311000 1 11123322 2222
Q ss_pred hHHHHHHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEE
Q 023645 182 DSLKALILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 182 ~~l~~~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
+. . ...|+||+........+.++.+.+.++++.+++
T Consensus 86 ~~---~------~~aD~Vilav~~~~~~~v~~~i~~~l~~~~ivv 121 (354)
T 1x0v_A 86 QA---A------EDADILIFVVPHQFIGKICDQLKGHLKANATGI 121 (354)
T ss_dssp HH---H------TTCSEEEECCCGGGHHHHHHHHTTCSCTTCEEE
T ss_pred HH---H------cCCCEEEEeCCHHHHHHHHHHHHhhCCCCCEEE
Confidence 21 1 468999998777777888888888898887554
No 491
>3c7a_A Octopine dehydrogenase; L) stereospecific opine dehydrogenas, oxidorecutase, oxidoreductase; HET: NAD; 2.10A {Pecten maximus} PDB: 3c7c_B* 3c7d_B* 3iqd_B*
Probab=79.93 E-value=19 Score=31.86 Aligned_cols=96 Identities=11% Similarity=0.120 Sum_probs=54.2
Q ss_pred EEEEEcCccCHHHHHHHHHCCC--CCEEEEEe---CChhHHHHHHHHHHHhCCC------Cc--EEEEE-cC-hhhHHHH
Q 023645 122 RCIEVGVYTGYSSLAIALVLPE--SGCLVACE---RDARSLEVAKKYYERAGVS------HK--VKIKH-GL-AADSLKA 186 (279)
Q Consensus 122 ~VLEiG~G~G~~t~~la~~~~~--~~~v~~iD---~s~~~~~~a~~~~~~~g~~------~~--v~~~~-gd-~~~~l~~ 186 (279)
+|.-||+ |.++..++..+.. +.+|+.+| .+++.++.+ .+..++. .. +.+.. -+ +...+..
T Consensus 4 kI~ViGa--G~~G~~~a~~La~~~G~~V~~~~~~~r~~~~~~~~---~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (404)
T 3c7a_A 4 KVCVCGG--GNGAHTLSGLAASRDGVEVRVLTLFADEAERWTKA---LGADELTVIVNEKDGTQTEVKSRPKVITKDPEI 78 (404)
T ss_dssp EEEEECC--SHHHHHHHHHHTTSTTEEEEEECCSTTHHHHHHHH---HTTSCEEEEEECSSSCEEEEEECCSEEESCHHH
T ss_pred eEEEECC--CHHHHHHHHHHHhCCCCEEEEEeCCCCcHHHHHHH---HhhccceeeeecCCCccceeeccceEEeCCHHH
Confidence 6888887 5566666655532 45899999 555544332 2222210 00 11100 00 1111222
Q ss_pred HHhCCCCCcEEEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 187 LILNGEASSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 187 ~~~~~~~~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
. ....|+||+..........++.+.+.++++.+|+.
T Consensus 79 a-----~~~aD~Vilav~~~~~~~v~~~l~~~l~~~~ivv~ 114 (404)
T 3c7a_A 79 A-----ISGADVVILTVPAFAHEGYFQAMAPYVQDSALIVG 114 (404)
T ss_dssp H-----HTTCSEEEECSCGGGHHHHHHHHTTTCCTTCEEEE
T ss_pred H-----hCCCCEEEEeCchHHHHHHHHHHHhhCCCCcEEEE
Confidence 1 14689999988777778889999999988865544
No 492
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=79.90 E-value=5.4 Score=33.60 Aligned_cols=84 Identities=14% Similarity=0.027 Sum_probs=54.9
Q ss_pred CCCEEEEEcCccCHHHHHHHHHC-CCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH---HHHHHhCC--C
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVL-PESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS---LKALILNG--E 192 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~-~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~---l~~~~~~~--~ 192 (279)
.+++||-.|++ |.++..+++.+ ..+.+|+.++.+++..+.+.+.+...+- .++.++.+|..+. ...+.+.- .
T Consensus 11 ~~k~vlITGas-~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~~v~~~~~~~~~~ 88 (311)
T 3o26_A 11 KRRCAVVTGGN-KGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNH-ENVVFHQLDVTDPIATMSSLADFIKTH 88 (311)
T ss_dssp -CCEEEESSCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTC-CSEEEEECCTTSCHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-CceEEEEccCCCcHHHHHHHHHHHHHh
Confidence 46688877754 66677766654 2367999999999887777666665443 3589999988653 22211100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
.+.+|+++.++.
T Consensus 89 ~g~iD~lv~nAg 100 (311)
T 3o26_A 89 FGKLDILVNNAG 100 (311)
T ss_dssp HSSCCEEEECCC
T ss_pred CCCCCEEEECCc
Confidence 257999998875
No 493
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=79.49 E-value=8.6 Score=31.69 Aligned_cols=83 Identities=13% Similarity=0.125 Sum_probs=51.9
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeC-ChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCC--C
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACER-DARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNG--E 192 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~-s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~--~ 192 (279)
.+++||-.| |+|..+..+++.+. .+.+|+.++. +++..+...+.++..+ .++.++.+|..+. +..+..+- .
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLG--AQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT--CCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 456888777 46777777776653 3568999998 7766655555555443 3588899998642 22221100 0
Q ss_pred CCcEEEEEEeCC
Q 023645 193 ASSYDFAFVDAE 204 (279)
Q Consensus 193 ~~~fDlI~id~~ 204 (279)
-+.+|.++..+.
T Consensus 97 ~~~~d~vi~~Ag 108 (274)
T 1ja9_A 97 FGGLDFVMSNSG 108 (274)
T ss_dssp HSCEEEEECCCC
T ss_pred cCCCCEEEECCC
Confidence 147999987653
No 494
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=79.43 E-value=7.8 Score=30.44 Aligned_cols=72 Identities=25% Similarity=0.169 Sum_probs=48.4
Q ss_pred EEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHHHHhCCCCCcEEEE
Q 023645 122 RCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKALILNGEASSYDFA 199 (279)
Q Consensus 122 ~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~~~~~~~~~~fDlI 199 (279)
+||-.| |+|..+..+++.+... +|++++.+++..+...+.+. . +++.+|..+. +.....+ .+.+|.|
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~-----~--~~~~~D~~~~~~~~~~~~~--~~~id~v 70 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVG-----A--RALPADLADELEAKALLEE--AGPLDLL 70 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHT-----C--EECCCCTTSHHHHHHHHHH--HCSEEEE
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhcc-----C--cEEEeeCCCHHHHHHHHHh--cCCCCEE
Confidence 577777 5788999999988766 99999999876554443332 1 6777887642 2333211 1479999
Q ss_pred EEeCC
Q 023645 200 FVDAE 204 (279)
Q Consensus 200 ~id~~ 204 (279)
+..+.
T Consensus 71 i~~ag 75 (207)
T 2yut_A 71 VHAVG 75 (207)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 87654
No 495
>3hn2_A 2-dehydropantoate 2-reductase; PSI-2, NYSGXRC, structural GE protein structure initiative; 2.50A {Geobacter metallireducens}
Probab=79.15 E-value=2.2 Score=36.82 Aligned_cols=92 Identities=15% Similarity=0.103 Sum_probs=53.0
Q ss_pred CEEEEEcCccCHHHH--HHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhCCC-----CcEEEEEcChhhHHHHHHhCCCC
Q 023645 121 QRCIEVGVYTGYSSL--AIALVLPESGCLVACERDARSLEVAKKYYERAGVS-----HKVKIKHGLAADSLKALILNGEA 193 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~--~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~-----~~v~~~~gd~~~~l~~~~~~~~~ 193 (279)
++|.=||+|.=..++ .|++. +.+|+.++.++ . +.+++.|+. ...++..-.+.......
T Consensus 3 mkI~IiGaGaiG~~~a~~L~~~---g~~V~~~~r~~--~----~~i~~~g~~~~~~~g~~~~~~~~~~~~~~~~------ 67 (312)
T 3hn2_A 3 LRIAIVGAGALGLYYGALLQRS---GEDVHFLLRRD--Y----EAIAGNGLKVFSINGDFTLPHVKGYRAPEEI------ 67 (312)
T ss_dssp -CEEEECCSTTHHHHHHHHHHT---SCCEEEECSTT--H----HHHHHTCEEEEETTCCEEESCCCEESCHHHH------
T ss_pred CEEEEECcCHHHHHHHHHHHHC---CCeEEEEEcCc--H----HHHHhCCCEEEcCCCeEEEeeceeecCHHHc------
Confidence 368888887533322 23332 35799999875 2 233344431 11111000111112222
Q ss_pred CcEEEEEEeCCccchHHHHHHHHccCCCCcEEEE
Q 023645 194 SSYDFAFVDAEKRMYQEYFELLLQLIRVGGIIVI 227 (279)
Q Consensus 194 ~~fDlI~id~~~~~~~~~l~~~~~~Lk~gG~lv~ 227 (279)
..+|+||+........+.++.+.+.++++..++.
T Consensus 68 ~~~D~vilavk~~~~~~~l~~l~~~l~~~~~iv~ 101 (312)
T 3hn2_A 68 GPMDLVLVGLKTFANSRYEELIRPLVEEGTQILT 101 (312)
T ss_dssp CCCSEEEECCCGGGGGGHHHHHGGGCCTTCEEEE
T ss_pred CCCCEEEEecCCCCcHHHHHHHHhhcCCCCEEEE
Confidence 5789999987777777889999999999987664
No 496
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=79.00 E-value=7.2 Score=32.81 Aligned_cols=82 Identities=18% Similarity=0.066 Sum_probs=52.5
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeC-ChhHHHHHHHHHHHhCCCCcEEEEEcChhhH--HHH----HHh
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACER-DARSLEVAKKYYERAGVSHKVKIKHGLAADS--LKA----LIL 189 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~-s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~--l~~----~~~ 189 (279)
..++++|-.|++ |.++..+++.+. .+.+|+.++. +++..+...+.+...+ .++.++.+|..+. +.. ..+
T Consensus 27 ~~~k~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~Dv~d~~~v~~~~~~~~~ 103 (280)
T 4da9_A 27 KARPVAIVTGGR-RGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLG--ARVIFLRADLADLSSHQATVDAVVA 103 (280)
T ss_dssp CCCCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTT--CCEEEEECCTTSGGGHHHHHHHHHH
T ss_pred cCCCEEEEecCC-CHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcC--CcEEEEEecCCCHHHHHHHHHHHHH
Confidence 456788888855 556666666542 3579999995 6666666666565544 3589999998652 222 211
Q ss_pred CCCCCcEEEEEEeCC
Q 023645 190 NGEASSYDFAFVDAE 204 (279)
Q Consensus 190 ~~~~~~fDlI~id~~ 204 (279)
. .++.|+++.++.
T Consensus 104 ~--~g~iD~lvnnAg 116 (280)
T 4da9_A 104 E--FGRIDCLVNNAG 116 (280)
T ss_dssp H--HSCCCEEEEECC
T ss_pred H--cCCCCEEEECCC
Confidence 1 257899987764
No 497
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=78.68 E-value=11 Score=33.72 Aligned_cols=89 Identities=15% Similarity=0.092 Sum_probs=54.3
Q ss_pred CEEEEEcCccCHHHHHHHHHCCCC----CEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhh--HHHHHHhCCCCC
Q 023645 121 QRCIEVGVYTGYSSLAIALVLPES----GCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAAD--SLKALILNGEAS 194 (279)
Q Consensus 121 ~~VLEiG~G~G~~t~~la~~~~~~----~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~--~l~~~~~~~~~~ 194 (279)
++|+=+|+ |..+..+++.+... .+|+.+|.+++..+...+.+...+ ..++..+..|+.+ .+..+.. ..
T Consensus 2 ~kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~-~~~~~~~~~D~~d~~~l~~~l~---~~ 75 (405)
T 4ina_A 2 AKVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKG-YGEIDITTVDADSIEELVALIN---EV 75 (405)
T ss_dssp CEEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTT-CCCCEEEECCTTCHHHHHHHHH---HH
T ss_pred CEEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhc-CCceEEEEecCCCHHHHHHHHH---hh
Confidence 37888988 56777776654322 389999999987766665555322 1247788888743 3333321 11
Q ss_pred cEEEEEEeCCccchHHHHHHH
Q 023645 195 SYDFAFVDAEKRMYQEYFELL 215 (279)
Q Consensus 195 ~fDlI~id~~~~~~~~~l~~~ 215 (279)
..|+|+...+........+.+
T Consensus 76 ~~DvVin~ag~~~~~~v~~a~ 96 (405)
T 4ina_A 76 KPQIVLNIALPYQDLTIMEAC 96 (405)
T ss_dssp CCSEEEECSCGGGHHHHHHHH
T ss_pred CCCEEEECCCcccChHHHHHH
Confidence 489998876644333333433
No 498
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=78.67 E-value=9.6 Score=31.33 Aligned_cols=83 Identities=10% Similarity=0.014 Sum_probs=53.5
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcCh--hh--HHH----HHH
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLA--AD--SLK----ALI 188 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~--~~--~l~----~~~ 188 (279)
..++++|-.|++ |.++..+++.+. .+.+|+.++.+++..+.+.+.+...+- .++.++..|. .+ ... ...
T Consensus 10 l~~k~vlVTGas-~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~ 87 (252)
T 3f1l_A 10 LNDRIILVTGAS-DGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETG-RQPQWFILDLLTCTSENCQQLAQRIA 87 (252)
T ss_dssp TTTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHS-CCCEEEECCTTTCCHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CCceEEEEecccCCHHHHHHHHHHHH
Confidence 356788888854 556666666542 367999999999887777666655432 2477888887 22 122 221
Q ss_pred hCCCCCcEEEEEEeCC
Q 023645 189 LNGEASSYDFAFVDAE 204 (279)
Q Consensus 189 ~~~~~~~fDlI~id~~ 204 (279)
+. .+.+|+++.++.
T Consensus 88 ~~--~g~id~lv~nAg 101 (252)
T 3f1l_A 88 VN--YPRLDGVLHNAG 101 (252)
T ss_dssp HH--CSCCSEEEECCC
T ss_pred Hh--CCCCCEEEECCc
Confidence 11 357999987654
No 499
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=78.66 E-value=33 Score=29.91 Aligned_cols=111 Identities=6% Similarity=-0.076 Sum_probs=65.3
Q ss_pred CCCEEEEEcCccCHHHHHHHHHCCCCCEEEEEeCChhHHHHHHHHHHHhC----------------------CCCcEEEE
Q 023645 119 GAQRCIEVGVYTGYSSLAIALVLPESGCLVACERDARSLEVAKKYYERAG----------------------VSHKVKIK 176 (279)
Q Consensus 119 ~~~~VLEiG~G~G~~t~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g----------------------~~~~v~~~ 176 (279)
+...|+-+|||.=.-...+......+.+++=||. |+.++.=++.+...+ ...+..++
T Consensus 90 ~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~-P~vi~~K~~~l~~~~~l~~~lg~~~~~~~~~~~~~~l~s~~y~~v 168 (334)
T 3iei_A 90 CHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDF-PMIVTRKLHSIKCKPPLSSPILELHSEDTLQMDGHILDSKRYAVI 168 (334)
T ss_dssp TCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEEC-HHHHHHHHHHHHHCHHHHHHHHHHSSSSSCBCCTTEEECSSEEEE
T ss_pred CCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCc-HHHHHHHHHHHhhchhhhhhhcccccccccccccccCCCCceEEE
Confidence 4679999999877666666543212567888887 555554334443210 14568899
Q ss_pred EcChhh--HHHHH-HhCC-CCCcEEEEEEeCC-----ccchHHHHHHHHccCCCCcEEEEeCC
Q 023645 177 HGLAAD--SLKAL-ILNG-EASSYDFAFVDAE-----KRMYQEYFELLLQLIRVGGIIVIDNV 230 (279)
Q Consensus 177 ~gd~~~--~l~~~-~~~~-~~~~fDlI~id~~-----~~~~~~~l~~~~~~Lk~gG~lv~dd~ 230 (279)
.+|..+ .+... ...+ +.+..-+++.-+. .+.....++.+.....+|..++++-+
T Consensus 169 ~~DL~d~~~l~~~L~~~g~d~~~Ptl~iaEGvL~YL~~~~~~~ll~~ia~~f~~~~~i~yE~i 231 (334)
T 3iei_A 169 GADLRDLSELEEKLKKCNMNTQLPTLLIAECVLVYMTPEQSANLLKWAANSFERAMFINYEQV 231 (334)
T ss_dssp ECCTTCHHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEEEEEEEC
T ss_pred ccccccchhHHHHHHhcCCCCCCCEEEEEchhhhCCCHHHHHHHHHHHHHhCCCceEEEEecc
Confidence 999865 34332 2222 2234445555543 44566777777777666656665544
No 500
>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}
Probab=78.61 E-value=13 Score=31.51 Aligned_cols=88 Identities=9% Similarity=0.076 Sum_probs=51.5
Q ss_pred cCCCEEEEEcCccCHHHHHHHHHCC-CCCEEEEEeCChhHHHHHHHHHHHhCCCCcEEEEEcChhhHHHHHHhCCCCCcE
Q 023645 118 LGAQRCIEVGVYTGYSSLAIALVLP-ESGCLVACERDARSLEVAKKYYERAGVSHKVKIKHGLAADSLKALILNGEASSY 196 (279)
Q Consensus 118 ~~~~~VLEiG~G~G~~t~~la~~~~-~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~v~~~~gd~~~~l~~~~~~~~~~~f 196 (279)
..+++|+=||+| ..+..+++.+. .+.+|+++|.+++..+.++ ..|. +... . +.+..+ -...
T Consensus 153 l~g~~v~IiG~G--~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~----~~g~----~~~~--~-~~l~~~-----l~~a 214 (293)
T 3d4o_A 153 IHGANVAVLGLG--RVGMSVARKFAALGAKVKVGARESDLLARIA----EMGM----EPFH--I-SKAAQE-----LRDV 214 (293)
T ss_dssp STTCEEEEECCS--HHHHHHHHHHHHTTCEEEEEESSHHHHHHHH----HTTS----EEEE--G-GGHHHH-----TTTC
T ss_pred CCCCEEEEEeeC--HHHHHHHHHHHhCCCEEEEEECCHHHHHHHH----HCCC----eecC--h-hhHHHH-----hcCC
Confidence 467899999975 55555444321 1469999999986544332 2332 2221 1 223333 3578
Q ss_pred EEEEEeCCccchHHHHHHHHccCCCCcEEE
Q 023645 197 DFAFVDAEKRMYQEYFELLLQLIRVGGIIV 226 (279)
Q Consensus 197 DlI~id~~~~~~~~~l~~~~~~Lk~gG~lv 226 (279)
|+|+...+...... .....+++|++++
T Consensus 215 DvVi~~~p~~~i~~---~~l~~mk~~~~li 241 (293)
T 3d4o_A 215 DVCINTIPALVVTA---NVLAEMPSHTFVI 241 (293)
T ss_dssp SEEEECCSSCCBCH---HHHHHSCTTCEEE
T ss_pred CEEEECCChHHhCH---HHHHhcCCCCEEE
Confidence 99998766432211 3456789988765
Done!