BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>023649
MAAISTPICFSSLVIPCKTWKTNSSHLFLGKFAEPHAKSFRNKPCSLLSAFSATRIQPHF
TVKASSSSSVGSAEYTEEPATKVKFQKSLSLPGYSSPLSLLGTGYREKVFAIIGVKVYAA
GLYINQSILSKLNAWKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGKTFWDALD
DAISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLDPSKMLVSISGDGLPSGVD
ATIESENVTFALYDVFFGGAPVSPSLKASVATGLATILK

High Scoring Gene Products

Symbol, full name Information P value
FAP3
fatty-acid-binding protein 3
protein from Arabidopsis thaliana 2.3e-64
CHIL
chalcone isomerase like
protein from Arabidopsis thaliana 3.3e-06
TT5
TRANSPARENT TESTA 5
protein from Arabidopsis thaliana 3.7e-06
FAP2
AT2G26310
protein from Arabidopsis thaliana 0.00012

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023649
        (279 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2024877 - symbol:FAP3 "fatty-acid-binding prot...   656  2.3e-64   1
TAIR|locus:2153539 - symbol:CHIL "chalcone isomerase like...   126  3.3e-06   1
TAIR|locus:2097228 - symbol:TT5 "TRANSPARENT TESTA 5" spe...   128  3.7e-06   1
TAIR|locus:2057751 - symbol:FAP2 "fatty-acid-binding prot...   119  0.00012   1


>TAIR|locus:2024877 [details] [associations]
            symbol:FAP3 "fatty-acid-binding protein 3" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=IDA]
            [GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0005504 "fatty
            acid binding" evidence=IPI] [GO:0006631 "fatty acid metabolic
            process" evidence=IMP] InterPro:IPR016087 InterPro:IPR016088
            Pfam:PF02431 EMBL:CP002684 GO:GO:0009570 GO:GO:0006631
            GO:GO:0005504 SUPFAM:SSF54626 GO:GO:0009813 EMBL:AC024260
            GO:GO:0045430 Gene3D:3.50.70.10 EMBL:BT025725 IPI:IPI00531223
            PIR:D96575 RefSeq:NP_175757.1 UniGene:At.37393 PDB:4DOL PDBsum:4DOL
            ProteinModelPortal:Q9C8L2 SMR:Q9C8L2 STRING:Q9C8L2 PRIDE:Q9C8L2
            EnsemblPlants:AT1G53520.1 GeneID:841787 KEGG:ath:AT1G53520
            TAIR:At1g53520 InParanoid:Q9C8L2 OMA:IIGVKVY PhylomeDB:Q9C8L2
            ProtClustDB:PLN02311 Genevestigator:Q9C8L2 Uniprot:Q9C8L2
        Length = 287

 Score = 656 (236.0 bits), Expect = 2.3e-64, P = 2.3e-64
 Identities = 152/285 (53%), Positives = 184/285 (64%)

Query:     1 MAAISTPICFSSLVIPCKTW-KTNSSHLFLGKFAE-----PHAKSFRNKPCSLLSAFSAT 54
             +AA+ + +C S L I C+      S + F GK                K  SLL      
Sbjct:     5 LAAVPSAVCVS-LRISCRNLDNAESIYHFPGKSLNRVSVLQTGNYVSRKGNSLLKNRHCG 63

Query:    55 RIQPHFTVKAXXXXXVGSAE-YTEEPATKVKFQKXXXXXXXXXXXXXXXTGYREKVFAII 113
              I     VK+     VG+AE Y EE AT VKF++               TG+REK FAII
Sbjct:    64 EIS-RVIVKSAASS-VGNAEDYAEETATSVKFKRSVTLPGCSSPLSLLGTGFREKKFAII 121

Query:   114 GVKVYAAGLYINQSILSKLNAWKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGK 173
             GVKVYAAG Y+N+SILS L+AW G+ A  IQ DSSLF +I+QA +EKSL+IVLVRDVDGK
Sbjct:   122 GVKVYAAGYYVNESILSGLSAWTGRSADEIQRDSSLFVSIFQAQAEKSLQIVLVRDVDGK 181

Query:   174 TFWDALDDAISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLDPSKMLVSISGD 233
             TFWDALD+AISPRI+ P+  D +ALSTFR IFQ R L KG+ I LTW++ S MLVS+S  
Sbjct:   182 TFWDALDEAISPRIKSPSSEDTTALSTFRGIFQNRPLNKGSVILLTWINTSNMLVSVSSG 241

Query:   234 GLPSGVDATIESENVTFALYDVFFGGAPVSPSLKASVATGLATIL 278
             GLP+ VDATIES NVT AL+DVFFG +PVSP+LK+SVA  LA  L
Sbjct:   242 GLPTNVDATIESGNVTSALFDVFFGDSPVSPTLKSSVANQLAMTL 286


>TAIR|locus:2153539 [details] [associations]
            symbol:CHIL "chalcone isomerase like" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0009813 "flavonoid biosynthetic process" evidence=IEA;RCA]
            [GO:0016872 "intramolecular lyase activity" evidence=IEA]
            [GO:0042398 "cellular modified amino acid biosynthetic process"
            evidence=IEA] [GO:0045430 "chalcone isomerase activity"
            evidence=IEA] [GO:0080167 "response to karrikin" evidence=IEP]
            [GO:0009718 "anthocyanin-containing compound biosynthetic process"
            evidence=RCA] [GO:0009744 "response to sucrose stimulus"
            evidence=RCA] [GO:0010224 "response to UV-B" evidence=RCA]
            InterPro:IPR016087 InterPro:IPR016088 Pfam:PF02431 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0080167 SUPFAM:SSF54626
            GO:GO:0009813 GO:GO:0045430 Gene3D:3.50.70.10 EMBL:AY063786
            EMBL:AY096448 EMBL:AY088019 IPI:IPI00533938 RefSeq:NP_568154.1
            RefSeq:NP_850770.1 UniGene:At.27434 PDB:4DOK PDBsum:4DOK
            HSSP:P28012 ProteinModelPortal:Q8VZW3 SMR:Q8VZW3 STRING:Q8VZW3
            PRIDE:Q8VZW3 EnsemblPlants:AT5G05270.1 EnsemblPlants:AT5G05270.2
            GeneID:830409 KEGG:ath:AT5G05270 TAIR:At5g05270 eggNOG:NOG261120
            HOGENOM:HOG000243947 InParanoid:Q8VZW3 OMA:VEFFQSK PhylomeDB:Q8VZW3
            ProtClustDB:PLN02804 ArrayExpress:Q8VZW3 Genevestigator:Q8VZW3
            Gene3D:1.10.890.20 InterPro:IPR016089 Uniprot:Q8VZW3
        Length = 209

 Score = 126 (49.4 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 37/170 (21%), Positives = 76/170 (44%)

Query:   115 VKVYAAGLYINQS-ILSKLNAWKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGK 173
             VK  A G+Y++ S + + L+ WKGK    +  D   FD +  A  EK +++V+++++ G 
Sbjct:    40 VKFTAIGVYLDPSDVKTHLDNWKGKTGKELAGDDDFFDALASAEMEKVIRVVVIKEIKGA 99

Query:   174 TFWDALDDAISPRIRIPTPVDESALSTFRSI---FQGRNLMKGTFIFLTWLDPSKML-VS 229
              +   L++ +  R+      +E   +    +   FQ +     + I   +     +  + 
Sbjct:   100 QYGVQLENTVRDRLAEEDKYEEEEETELEKVVGFFQSKYFKANSVITYHFSAKDGICEIG 159

Query:   230 ISGDGLPSGVDATIESENVTFALYDVFFGGAP-VSPSLKASVATGLATIL 278
                +G        +E+ NV   +   +  G+  VSPS   S+A  ++ +L
Sbjct:   160 FETEGKEEE-KLKVENANVVGMMQRWYLSGSRGVSPSTIVSIADSISAVL 208


>TAIR|locus:2097228 [details] [associations]
            symbol:TT5 "TRANSPARENT TESTA 5" species:3702
            "Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
            [GO:0009813 "flavonoid biosynthetic process" evidence=IEA;RCA;IMP]
            [GO:0016872 "intramolecular lyase activity" evidence=IEA]
            [GO:0042398 "cellular modified amino acid biosynthetic process"
            evidence=IEA] [GO:0045430 "chalcone isomerase activity"
            evidence=IEA;IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005783 "endoplasmic reticulum" evidence=IDA] [GO:0009705
            "plant-type vacuole membrane" evidence=IDA] [GO:0042406 "extrinsic
            to endoplasmic reticulum membrane" evidence=IDA] [GO:0010224
            "response to UV-B" evidence=RCA;IMP] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0080167 "response to karrikin" evidence=IEP]
            [GO:0009733 "response to auxin stimulus" evidence=IEP] [GO:0009718
            "anthocyanin-containing compound biosynthetic process"
            evidence=RCA] [GO:0009744 "response to sucrose stimulus"
            evidence=RCA] [GO:0009411 "response to UV" evidence=IMP]
            InterPro:IPR016087 InterPro:IPR016088 Pfam:PF02431
            UniPathway:UPA00154 GO:GO:0005634 EMBL:CP002686
            GenomeReviews:BA000014_GR GO:GO:0009733 GO:GO:0080167 EMBL:AL132970
            GO:GO:0009705 SUPFAM:SSF54626 GO:GO:0042406 GO:GO:0010224
            GO:GO:0009813 EMBL:M86358 EMBL:AJ287299 EMBL:AJ287300 EMBL:AJ287301
            EMBL:AJ287302 EMBL:AJ287303 EMBL:AJ287304 EMBL:AJ287305
            EMBL:AJ287306 EMBL:AJ287307 EMBL:AJ287308 EMBL:AJ287309
            EMBL:AJ287310 EMBL:AJ287311 EMBL:AJ287312 EMBL:AJ287313
            EMBL:AJ287314 EMBL:AJ287315 EMBL:AJ287316 EMBL:AJ287317
            EMBL:AJ287318 EMBL:AJ287319 EMBL:AJ287320 EMBL:AJ287321
            EMBL:AJ492461 EMBL:AJ492462 EMBL:AJ492463 EMBL:AJ492464
            EMBL:AJ492465 EMBL:AJ492466 EMBL:AJ492467 EMBL:AJ492468
            EMBL:AJ492469 EMBL:AJ492470 EMBL:AJ492471 EMBL:AJ492472
            EMBL:AJ492473 EMBL:AJ492474 EMBL:AJ492475 EMBL:AJ492476
            EMBL:AJ492477 EMBL:AJ492478 EMBL:AJ492479 EMBL:AJ492480
            EMBL:AJ492481 EMBL:AJ492482 EMBL:AJ492483 EMBL:AJ492484
            EMBL:AJ492485 EMBL:AJ492486 EMBL:AJ492487 EMBL:AJ492488
            EMBL:AJ492489 EMBL:AJ492490 EMBL:AJ492491 EMBL:AJ492492
            EMBL:AJ492493 EMBL:AJ492494 EMBL:AJ492495 EMBL:AJ492496
            EMBL:AJ492497 EMBL:AJ492498 EMBL:AJ492499 EMBL:AJ492500
            EMBL:AJ492501 EMBL:AJ492502 EMBL:AJ492503 EMBL:AJ418046
            EMBL:AF439537 EMBL:BT004265 EMBL:BT005528 EMBL:AY086088
            IPI:IPI00534732 PIR:JQ1687 PIR:T47651 RefSeq:NP_191072.1
            UniGene:At.27425 PDB:4DOI PDBsum:4DOI ProteinModelPortal:P41088
            SMR:P41088 IntAct:P41088 STRING:P41088 PaxDb:P41088 PRIDE:P41088
            EnsemblPlants:AT3G55120.1 GeneID:824678 KEGG:ath:AT3G55120
            TAIR:At3g55120 eggNOG:NOG286273 HOGENOM:HOG000006208
            InParanoid:P41088 KO:K01859 OMA:ENCVAFW PhylomeDB:P41088
            ProtClustDB:PLN02559 Genevestigator:P41088 GermOnline:AT3G55120
            GO:GO:0045430 Gene3D:3.50.70.10 Uniprot:P41088
        Length = 246

 Score = 128 (50.1 bits), Expect = 3.7e-06, P = 3.7e-06
 Identities = 39/163 (23%), Positives = 73/163 (44%)

Query:   121 GLYINQSILSKLNA-WKGKGAANIQEDSSLFDTIYQAPSEKSLKIVLVRDVDGKTFWDAL 179
             G+Y+  + +  L+  WKGK    + E    F  I     EK +K+ +   + G+ + + +
Sbjct:    62 GVYLEGNAVPSLSVKWKGKTTEELTESIPFFREIVTGAFEKFIKVTMKLPLTGQQYSEKV 121

Query:   180 DD---AISPRIRIPTPVDESALSTFRSIFQGRNLMKGTFIFLTWLDPSKMLVSIS-GDGL 235
              +   AI  ++ + T  +  A+  F  IF+      G+ I         + V+ S  D +
Sbjct:   122 TENCVAIWKQLGLYTDCEAKAVEKFLEIFKEETFPPGSSILFALSPTGSLTVAFSKDDSI 181

Query:   236 PSGVDATIESENVTFALYDVFFGGAPVSPSLKASVATGLATIL 278
             P    A IE++ +  A+ +   G   VSP  + SVA  L+ ++
Sbjct:   182 PETGIAVIENKLLAEAVLESIIGKNGVSPGTRLSVAERLSQLM 224


>TAIR|locus:2057751 [details] [associations]
            symbol:FAP2 "fatty-acid-binding protein 2" species:3702
            "Arabidopsis thaliana" [GO:0042398 "cellular modified amino acid
            biosynthetic process" evidence=IEA] [GO:0005504 "fatty acid
            binding" evidence=IDA] [GO:0009570 "chloroplast stroma"
            evidence=IDA] InterPro:IPR016087 Pfam:PF02431 GO:GO:0009570
            EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005504 GO:GO:0016872
            SUPFAM:SSF54626 EMBL:AY954800 IPI:IPI00534378 RefSeq:NP_180199.3
            UniGene:At.38913 UniGene:At.68811 ProteinModelPortal:Q58G09
            SMR:Q58G09 EnsemblPlants:AT2G26310.1 GeneID:817171
            KEGG:ath:AT2G26310 TAIR:At2g26310 eggNOG:NOG274613
            HOGENOM:HOG000241741 InParanoid:Q58G09 OMA:IEFPMLL PhylomeDB:Q58G09
            ProtClustDB:PLN03175 Genevestigator:Q58G09 Uniprot:Q58G09
        Length = 398

 Score = 119 (46.9 bits), Expect = 0.00012, P = 0.00012
 Identities = 46/209 (22%), Positives = 88/209 (42%)

Query:    78 EPATKVKFQKXXXXXXXXXXXXXX-XTGYRE-KVFAIIGVKVYAAGLYIN-QSILSKLNA 134
             EP T ++F                  TG R  K+  I  +KVYA G Y++  S+  KL  
Sbjct:   193 EPRTGIEFPMLLKENASRSNSEVLVATGSRTMKIIRIKSLKVYAFGFYVHPSSVCQKLGR 252

Query:   135 -WKGKGAANIQEDSSLFDTIYQAPSEKSLKIVL-VRDVDGKTFWDALDDAISPRIRIPTP 192
              +    A+ + +   L+  + +     S+++V+    +   T  D  + ++  R+    P
Sbjct:   253 KYASVPASKLDKCDDLYKDLLREDIVMSVRLVVNYNGLKINTVRDVFEKSLRARLVKANP 312

Query:   193 -VDESALSTFRSIF-QGRNLMKGTFIFLTWLDPSKMLVSISGDGLPSGVDATIESENVTF 250
               D + L+ F S F Q   +  GT I     +  +++  I G+ +       + S+++  
Sbjct:   313 KTDFNCLNDFGSFFRQDIPIPAGTIIDFRRTEDGQLITEIGGNLI-----GAVRSKDLCR 367

Query:   251 ALYDVFFGGAPVSPSLKASVATGLATILK 279
             A + ++ G  PVS   K  +   +  I+K
Sbjct:   368 AFFGMYIGDVPVSEQTKEEIGRKVVGIIK 396


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.319   0.133   0.391    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      279       259   0.00088  114 3  11 22  0.45    33
                                                     32  0.49    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  603 (64 KB)
  Total size of DFA:  183 KB (2105 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.44u 0.11s 19.55t   Elapsed:  00:00:01
  Total cpu time:  19.44u 0.11s 19.55t   Elapsed:  00:00:01
  Start:  Fri May 10 13:14:25 2013   End:  Fri May 10 13:14:26 2013

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