AmiGO: BLAST Results


BLAST match view associations BLAST with hdac6 hdac6 hdac6 histone deacetylase 6	gene_product from Danio rerio	3.7e-19
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Histone deacetylase 6	protein from Homo sapiens	3.9e-19
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Histone deacetylase 6	protein from Homo sapiens	4.1e-19
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Uncharacterized protein	protein from Sus scrofa	2.9e-18
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Uncharacterized protein	protein from Bos taurus	4.7e-18
BLAST match view associations BLAST with Hdac6 Hdac6 Hdac6 histone deacetylase 6	protein from Mus musculus	4.9e-18
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-17
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6	protein from Drosophila melanogaster	9.0e-17
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Protein HDA-6, isoform d	protein from Caenorhabditis elegans	2.3e-16
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Histone deacetylase 6	protein from Caenorhabditis elegans	7.9e-16
BLAST match view associations BLAST with hda-6 hda-6 hda-6	gene from Caenorhabditis elegans	7.9e-16
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Protein HDA-6, isoform c	protein from Caenorhabditis elegans	7.9e-16
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Homo sapiens	6.8e-12
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Homo sapiens	6.8e-12
BLAST match view associations BLAST with sir2A sir2A sir2A UBP-type zinc finger-containing protein	gene from Dictyostelium discoideum	3.8e-10
BLAST match view associations BLAST with Usp44 Usp44 Usp44 ubiquitin specific peptidase 44	gene from Rattus norvegicus	1.3e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Homo sapiens	1.9e-09
BLAST match view associations BLAST with Usp44 Usp44 Usp44 ubiquitin specific peptidase 44	protein from Mus musculus	1.9e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	3.3e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Homo sapiens	3.4e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	3.4e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	4.3e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	5.2e-09
BLAST match view associations BLAST with usp44 usp44 usp44 ubiquitin specific peptidase 44	gene_product from Danio rerio	5.5e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	5.7e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Ailuropoda melanoleuca	7.5e-09
BLAST match view associations BLAST with USP3 USP3 USP3 cDNA FLJ60902, highly similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)	protein from Homo sapiens	1.4e-08
BLAST match view associations BLAST with DDB_G0268872 DDB_G0268872 DDB_G0268872 putative ubiquitin carboxyl-terminal hydrolase (UCH)	gene from Dictyostelium discoideum	2.2e-08
BLAST match view associations BLAST with usp44 usp44 usp44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Xenopus (Silurana) tropicalis	2.5e-08
BLAST match view associations BLAST with DDB_G0270200 DDB_G0270200 DDB_G0270200 BRCA1-associated protein	gene from Dictyostelium discoideum	2.7e-08
BLAST match view associations BLAST with usp44-b usp44-b usp44-b Ubiquitin carboxyl-terminal hydrolase 44-B	protein from Xenopus laevis	2.7e-08
BLAST match view associations BLAST with usp44-a usp44-a usp44-a Ubiquitin carboxyl-terminal hydrolase 44-A	protein from Xenopus laevis	2.7e-08
BLAST match view associations BLAST with usp49 usp49 usp49 ubiquitin specific peptidase 49	gene_product from Danio rerio	3.3e-08
BLAST match view associations BLAST with I3LRM6 I3LRM6 I3LRM6 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	4.0e-08
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	4.5e-08
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	4.6e-08
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	5.9e-08
BLAST match view associations BLAST with I3LCU7 I3LCU7 I3LCU7 Uncharacterized protein	protein from Sus scrofa	6.3e-08
BLAST match view associations BLAST with Usp49 Usp49 Usp49 ubiquitin specific peptidase 49	protein from Mus musculus	7.8e-08
BLAST match view associations BLAST with Usp49 Usp49 Usp49 ubiquitin specific peptidase 49	gene from Rattus norvegicus	1.0e-07
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase 49	protein from Homo sapiens	1.1e-07
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase 49	protein from Homo sapiens	1.3e-07
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Sus scrofa	3.0e-07
BLAST match view associations BLAST with Usp3 Usp3 Usp3 ubiquitin specific peptidase 3	gene from Rattus norvegicus	5.6e-07
BLAST match view associations BLAST with Usp3 Usp3 Usp3 ubiquitin specific peptidase 3	protein from Mus musculus	3.5e-06
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	4.6e-06
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	4.6e-06
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	4.9e-06
BLAST match view associations BLAST with BRAP BRAP BRAP BRCA1-associated protein	protein from Homo sapiens	5.7e-06
BLAST match view associations BLAST with BRAP BRAP BRAP cDNA FLJ50182, highly similar to BRCA1-associated protein (EC 6.3.2.-)	protein from Homo sapiens	8.9e-06
BLAST match view associations BLAST with fbxl22 fbxl22 fbxl22 F-box and leucine-rich repeat protein 22	gene_product from Danio rerio	1.1e-05
BLAST match view associations BLAST with brap brap brap BRCA1 associated protein	gene_product from Danio rerio	1.2e-05
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	1.3e-05
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Gallus gallus	1.4e-05
BLAST match view associations BLAST with BRAP BRAP BRAP BRCA1-associated protein	protein from Homo sapiens	1.5e-05
BLAST match view associations BLAST with ETP1 ETP1 ETP1 Putative protein of unknown function required for growth on ethanol	gene from Saccharomyces cerevisiae	1.5e-05
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Gallus gallus	1.5e-05
BLAST match view associations BLAST with Brap Brap Brap BRCA1 associated protein	protein from Mus musculus	1.6e-05
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Bos taurus	1.6e-05
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Canis lupus familiaris	1.6e-05
BLAST match view associations BLAST with BRAP BRAP BRAP BRCA1-associated protein	protein from Homo sapiens	1.6e-05
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	1.7e-05
BLAST match view associations BLAST with CG5555 CG5555 CG5555	protein from Drosophila melanogaster	0.00011
BLAST match view associations BLAST with AT2G14830 AT2G14830 AT2G14830	protein from Arabidopsis thaliana	0.00019
BLAST match view associations BLAST with BRIZ1 BRIZ1 BRIZ1 AT2G42160	protein from Arabidopsis thaliana	0.00021
BLAST match view associations BLAST with usp-3 usp-3 usp-3	gene from Caenorhabditis elegans	0.00025
BLAST match view associations BLAST with BRIZ2 BRIZ2 BRIZ2 AT2G26000	protein from Arabidopsis thaliana	0.00028
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	0.00030
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	0.00037
BLAST match view associations BLAST with orf19.1576 orf19.1576 orf19.1576	gene_product from Candida albicans	0.00049
BLAST match view associations BLAST with EEED8.16 EEED8.16 EEED8.16	gene from Caenorhabditis elegans	0.00099
Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  023654
        (279 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

ZFIN|ZDB-GENE-030131-3232 - symbol:hdac6 "histone deacety...   232  3.7e-19   2
UNIPROTKB|Q9UBN7 - symbol:HDAC6 "Histone deacetylase 6" s...   233  3.9e-19   2
UNIPROTKB|B4DZH6 - symbol:HDAC6 "Histone deacetylase 6" s...   233  4.1e-19   2
UNIPROTKB|I3LEZ7 - symbol:HDAC6 "Uncharacterized protein"...   234  2.9e-18   1
UNIPROTKB|F1MQP3 - symbol:HDAC6 "Uncharacterized protein"...   232  4.7e-18   1
MGI|MGI:1333752 - symbol:Hdac6 "histone deacetylase 6" sp...   221  4.9e-18   2
UNIPROTKB|F1LSE3 - symbol:Hdac6 "Protein Hdac6" species:1...   226  2.1e-17   1
UNIPROTKB|F1PN11 - symbol:HDAC6 "Uncharacterized protein"...   225  2.7e-17   1
FB|FBgn0026428 - symbol:HDAC6 "HDAC6" species:7227 "Droso...   220  9.0e-17   1
UNIPROTKB|G8JYB7 - symbol:hda-6 "Protein HDA-6, isoform d...   203  2.3e-16   1
UNIPROTKB|Q20296 - symbol:hda-6 "Histone deacetylase 6" s...   203  7.9e-16   2
WB|WBGene00018319 - symbol:hda-6 species:6239 "Caenorhabd...   203  7.9e-16   2
UNIPROTKB|A7LPD8 - symbol:hda-6 "Protein HDA-6, isoform c...   203  7.9e-16   2
UNIPROTKB|F8VRW0 - symbol:USP44 "Ubiquitin carboxyl-termi...   163  6.8e-12   1
UNIPROTKB|F8VVD6 - symbol:USP44 "Ubiquitin carboxyl-termi...   163  6.8e-12   1
DICTYBASE|DDB_G0283917 - symbol:sir2A "UBP-type zinc fing...   169  3.8e-10   1
RGD|1308216 - symbol:Usp44 "ubiquitin specific peptidase ...   164  1.3e-09   1
UNIPROTKB|F8VRI7 - symbol:USP44 "Ubiquitin carboxyl-termi...   163  1.9e-09   1
MGI|MGI:3045318 - symbol:Usp44 "ubiquitin specific peptid...   165  1.9e-09   1
UNIPROTKB|I3LA47 - symbol:USP44 "Ubiquitin carboxyl-termi...   163  3.3e-09   1
UNIPROTKB|Q9H0E7 - symbol:USP44 "Ubiquitin carboxyl-termi...   163  3.4e-09   1
UNIPROTKB|F1P4C5 - symbol:USP44 "Ubiquitin carboxyl-termi...   163  3.4e-09   1
UNIPROTKB|E1BLZ0 - symbol:USP44 "Ubiquitin carboxyl-termi...   162  4.3e-09   1
UNIPROTKB|E2R0T7 - symbol:USP44 "Ubiquitin carboxyl-termi...   161  5.2e-09   1
ZFIN|ZDB-GENE-040426-774 - symbol:usp44 "ubiquitin specif...   161  5.5e-09   1
UNIPROTKB|E2R0W7 - symbol:USP44 "Ubiquitin carboxyl-termi...   161  5.7e-09   1
UNIPROTKB|D2HBJ8 - symbol:USP44 "Ubiquitin carboxyl-termi...   160  7.5e-09   1
UNIPROTKB|B4DV65 - symbol:USP3 "cDNA FLJ60902, highly sim...   134  1.4e-08   1
DICTYBASE|DDB_G0268872 - symbol:DDB_G0268872 "putative ub...   161  2.2e-08   1
UNIPROTKB|Q0V9G5 - symbol:usp44 "Ubiquitin carboxyl-termi...   155  2.5e-08   1
DICTYBASE|DDB_G0270200 - symbol:DDB_G0270200 "BRCA1-assoc...   155  2.7e-08   1
UNIPROTKB|Q5XGZ2 - symbol:usp44-b "Ubiquitin carboxyl-ter...   155  2.7e-08   1
UNIPROTKB|Q6NTR6 - symbol:usp44-a "Ubiquitin carboxyl-ter...   155  2.7e-08   1
ZFIN|ZDB-GENE-050208-484 - symbol:usp49 "ubiquitin specif...   154  3.3e-08   1
UNIPROTKB|I3LRM6 - symbol:I3LRM6 "Ubiquitin carboxyl-term...   153  4.0e-08   1
UNIPROTKB|E2RP15 - symbol:USP49 "Ubiquitin carboxyl-termi...   153  4.5e-08   1
UNIPROTKB|F1RUW2 - symbol:USP49 "Ubiquitin carboxyl-termi...   153  4.6e-08   1
UNIPROTKB|E1BGQ9 - symbol:USP49 "Ubiquitin carboxyl-termi...   152  5.9e-08   1
UNIPROTKB|I3LCU7 - symbol:I3LCU7 "Uncharacterized protein...   128  6.3e-08   1
MGI|MGI:2685391 - symbol:Usp49 "ubiquitin specific peptid...   151  7.8e-08   1
RGD|1310513 - symbol:Usp49 "ubiquitin specific peptidase ...   150  1.0e-07   1
UNIPROTKB|Q5T3E1 - symbol:USP49 "Ubiquitin carboxyl-termi...   149  1.1e-07   1
UNIPROTKB|Q70CQ1 - symbol:USP49 "Ubiquitin carboxyl-termi...   149  1.3e-07   1
UNIPROTKB|I3L5N8 - symbol:BRAP "Uncharacterized protein" ...   130  3.0e-07   1
RGD|1308852 - symbol:Usp3 "ubiquitin specific peptidase 3...   142  5.6e-07   1
MGI|MGI:2152450 - symbol:Usp3 "ubiquitin specific peptida...   135  3.5e-06   1
UNIPROTKB|E2QZQ0 - symbol:USP3 "Ubiquitin carboxyl-termin...   134  4.6e-06   1
UNIPROTKB|Q9Y6I4 - symbol:USP3 "Ubiquitin carboxyl-termin...   134  4.6e-06   1
UNIPROTKB|H0YMP6 - symbol:USP3 "Ubiquitin carboxyl-termin...   111  4.9e-06   1
POMBASE|SPBC6B1.06c - symbol:ubp14 "ubiquitin C-terminal ...   126  5.6e-06   2
UNIPROTKB|F8VZK5 - symbol:BRAP "BRCA1-associated protein"...   130  5.7e-06   1
UNIPROTKB|B4DRM1 - symbol:BRAP "cDNA FLJ50182, highly sim...   130  8.9e-06   1
ZFIN|ZDB-GENE-050227-1 - symbol:fbxl22 "F-box and leucine...   127  1.1e-05   2
ZFIN|ZDB-GENE-040718-168 - symbol:brap "BRCA1 associated ...   131  1.2e-05   1
UNIPROTKB|H0YL81 - symbol:USP3 "Ubiquitin carboxyl-termin...   107  1.3e-05   1
UNIPROTKB|F1NJH4 - symbol:BRAP "Uncharacterized protein" ...   130  1.4e-05   1
UNIPROTKB|J3KNN7 - symbol:BRAP "BRCA1-associated protein"...   130  1.5e-05   1
SGD|S000001002 - symbol:ETP1 "Putative protein of unknown...   130  1.5e-05   1
UNIPROTKB|F1NR06 - symbol:BRAP "Uncharacterized protein" ...   130  1.5e-05   1
MGI|MGI:1919649 - symbol:Brap "BRCA1 associated protein" ...   130  1.6e-05   1
UNIPROTKB|A6H716 - symbol:BRAP "BRAP protein" species:991...   130  1.6e-05   1
UNIPROTKB|F1PGI5 - symbol:BRAP "Uncharacterized protein" ...   130  1.6e-05   1
UNIPROTKB|Q7Z569 - symbol:BRAP "BRCA1-associated protein"...   130  1.6e-05   1
UNIPROTKB|F1N0I6 - symbol:USP3 "Ubiquitin carboxyl-termin...   129  1.7e-05   1
ASPGD|ASPL0000042460 - symbol:AN10251 species:162425 "Eme...   123  7.7e-05   1
FB|FBgn0038686 - symbol:CG5555 species:7227 "Drosophila m...   122  0.00011   1
TAIR|locus:2046951 - symbol:AT2G14830 species:3702 "Arabi...   119  0.00019   1
TAIR|locus:2060045 - symbol:BRIZ1 "AT2G42160" species:370...   119  0.00021   1
WB|WBGene00013506 - symbol:usp-3 species:6239 "Caenorhabd...   119  0.00025   1
TAIR|locus:2057469 - symbol:BRIZ2 "AT2G26000" species:370...   109  0.00028   2
UNIPROTKB|F1NQJ6 - symbol:USP3 "Ubiquitin carboxyl-termin...   118  0.00030   1
UNIPROTKB|H0YNX9 - symbol:USP3 "Ubiquitin carboxyl-termin...    94  0.00037   1
CGD|CAL0005604 - symbol:orf19.1576 species:5476 "Candida ...   117  0.00049   1
POMBASE|SPAC16E8.13 - symbol:SPAC16E8.13 "ubiquitin-prote...   115  0.00069   1
WB|WBGene00017144 - symbol:EEED8.16 species:6239 "Caenorh...   114  0.00099   1


>ZFIN|ZDB-GENE-030131-3232 [details] [associations]
            symbol:hdac6 "histone deacetylase 6" species:7955
            "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006476 "protein deacetylation" evidence=IGI] [GO:0001525
            "angiogenesis" evidence=IGI;IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 ZFIN:ZDB-GENE-030131-3232
            GO:GO:0008270 GO:GO:0001525 GO:GO:0016787 Gene3D:3.30.40.10
            InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GeneTree:ENSGT00530000062809
            CTD:10013 GO:GO:0006476 EMBL:BX469901 IPI:IPI01023393
            RefSeq:XP_693858.4 UniGene:Dr.78784 PRIDE:F8W4B7
            Ensembl:ENSDART00000148993 GeneID:565482 KEGG:dre:565482
            NextBio:20885908 ArrayExpress:F8W4B7 Bgee:F8W4B7 Uniprot:F8W4B7
        Length = 1081

 Score = 232 (86.7 bits), Expect = 4.4e-18, P = 4.4e-18
 Identities = 47/126 (37%), Positives = 71/126 (56%)

Query:    15 DEDEMMIGGELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVL 74
             D D M +   L W  HL S   + A    D+ +      PC  C     NW+CL C +VL
Sbjct:   966 DVDTMYVVDPLPWCPHLESVRPVPAG-GIDVFQ------PCEECGGEAENWICLFCYKVL 1018

Query:    75 CSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPVHETSYVLKFGR 134
             C RYVN+HM+ H +E  H V L ++DLSVWC+AC +Y++ + + + +     ++++KFG 
Sbjct:  1019 CGRYVNQHMVTHGQESGHPVVLSFADLSVWCYACESYVHNKVLHEAK---NAAHLVKFGE 1075

Query:   135 AL-PFN 139
              + PFN
Sbjct:  1076 GIHPFN 1081

 Score = 226 (84.6 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
 Identities = 39/86 (45%), Positives = 55/86 (63%)

Query:   187 PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLN 246
             PC  C     NW+CL C +VLC RYVN+HM+ H QE+ H V L ++DLSVWC+AC +Y++
Sbjct:   998 PCEECGGEAENWICLFCYKVLCGRYVNQHMVTHGQESGHPVVLSFADLSVWCYACESYVH 1057

Query:   247 AQAILQLQPVHETAYVLKFGRAL-PF 271
              +    L      A+++KFG  + PF
Sbjct:  1058 NKV---LHEAKNAAHLVKFGEGIHPF 1080

 Score = 43 (20.2 bits), Expect = 3.7e-19, Sum P(2) = 3.7e-19
 Identities = 8/25 (32%), Positives = 16/25 (64%)

Query:    22 GGELGWVRHLASCDHLVASLSSDLA 46
             GG++G   ++A+  HLV  ++ + A
Sbjct:   670 GGKMGDPEYMAAFHHLVMPIAREFA 694


>UNIPROTKB|Q9UBN7 [details] [associations]
            symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
            sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003779
            "actin binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0032041 "NAD-dependent histone
            deacetylase activity (H3-K14 specific)" evidence=IEA] [GO:0046969
            "NAD-dependent histone deacetylase activity (H3-K9 specific)"
            evidence=IEA] [GO:0046970 "NAD-dependent histone deacetylase
            activity (H4-K16 specific)" evidence=IEA] [GO:0097372
            "NAD-dependent histone deacetylase activity (H3-K18 specific)"
            evidence=IEA] [GO:0000209 "protein polyubiquitination"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IEA]
            [GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0048487
            "beta-tubulin binding" evidence=IEA] [GO:0071218 "cellular response
            to misfolded protein" evidence=IEA] [GO:0042903 "tubulin
            deacetylase activity" evidence=ISS;IDA] [GO:0042826 "histone
            deacetylase binding" evidence=IPI] [GO:0005737 "cytoplasm"
            evidence=ISS] [GO:0019899 "enzyme binding" evidence=ISS]
            [GO:0016575 "histone deacetylation" evidence=ISS;IDA] [GO:0045892
            "negative regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0000118 "histone deacetylase complex" evidence=IDA] [GO:0005874
            "microtubule" evidence=IDA] [GO:0090042 "tubulin deacetylation"
            evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISS;IDA]
            [GO:0005829 "cytosol" evidence=ISS] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0008017 "microtubule binding" evidence=ISS;IDA]
            [GO:0004407 "histone deacetylase activity" evidence=IDA]
            [GO:0051879 "Hsp90 protein binding" evidence=IDA] [GO:0006476
            "protein deacetylation" evidence=IMP] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IMP]
            [GO:0043242 "negative regulation of protein complex disassembly"
            evidence=IMP] [GO:0060632 "regulation of microtubule-based
            movement" evidence=IC] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IDA] [GO:0031252 "cell leading edge"
            evidence=IDA] [GO:0010634 "positive regulation of epithelial cell
            migration" evidence=IMP] [GO:0045861 "negative regulation of
            proteolysis" evidence=IMP] [GO:0008013 "beta-catenin binding"
            evidence=IPI] [GO:0070848 "response to growth factor stimulus"
            evidence=IMP] [GO:0016234 "inclusion body" evidence=IDA]
            [GO:0016236 "macroautophagy" evidence=IMP] [GO:0035967 "cellular
            response to topologically incorrect protein" evidence=IMP]
            [GO:0006886 "intracellular protein transport" evidence=IMP]
            [GO:0032418 "lysosome localization" evidence=IMP] [GO:0005875
            "microtubule associated complex" evidence=IDA] [GO:0043014
            "alpha-tubulin binding" evidence=IDA] [GO:0016235 "aggresome"
            evidence=IDA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IMP] [GO:0005901 "caveola" evidence=IDA] [GO:0043065
            "positive regulation of apoptotic process" evidence=IMP]
            [GO:0070301 "cellular response to hydrogen peroxide" evidence=IMP]
            [GO:0051354 "negative regulation of oxidoreductase activity"
            evidence=IC] [GO:0010727 "negative regulation of hydrogen peroxide
            metabolic process" evidence=IC] [GO:0070842 "aggresome assembly"
            evidence=IMP] [GO:0070845 "polyubiquitinated misfolded protein
            transport" evidence=IMP] [GO:0051788 "response to misfolded
            protein" evidence=IMP] [GO:0006515 "misfolded or incompletely
            synthesized protein catabolic process" evidence=IMP] [GO:0031593
            "polyubiquitin binding" evidence=IDA] [GO:0030286 "dynein complex"
            evidence=IDA] [GO:0010033 "response to organic substance"
            evidence=IMP] [GO:0009636 "response to toxic substance"
            evidence=IMP] [GO:0009967 "positive regulation of signal
            transduction" evidence=IMP] [GO:0010469 "regulation of receptor
            activity" evidence=IMP] [GO:0060765 "regulation of androgen
            receptor signaling pathway" evidence=TAS] [GO:0048156 "tau protein
            binding" evidence=IDA] [GO:0070846 "Hsp90 deacetylation"
            evidence=IMP] [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=IMP]
            [GO:0070840 "dynein complex binding" evidence=IDA] [GO:0005730
            "nucleolus" evidence=IDA] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0048471
            Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
            GO:GO:0045892 GO:GO:0005875 GO:GO:0031252 GO:GO:0010469
            GO:GO:0070301 GO:GO:0046872 GO:GO:0009636 GO:GO:0008270
            GO:GO:0045861 GO:GO:0006351 GO:GO:0019899 GO:GO:0043065
            GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901
            GO:GO:0016235 GO:GO:0006515 GO:GO:0031593 GO:GO:0051879
            GO:GO:0008017 GO:GO:0005874 GO:GO:0000209 GO:GO:0060765
            Pathway_Interaction_DB:hdac_classi_pathway GO:GO:0070848
            GO:GO:0005881 GO:GO:0007026 GO:GO:0016236 GO:GO:0010634
            GO:GO:0043014 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0051788
            GO:GO:0043241 GO:GO:0043162 GO:GO:0070842 GO:GO:0048156
            EMBL:CH471224 GO:GO:0010870 EMBL:AF196971 GO:GO:0051354
            OrthoDB:EOG40P464 BRENDA:3.5.1.98 GO:GO:0004407 GO:GO:0042903
            HOGENOM:HOG000004769 DrugBank:DB02546 GO:GO:0034983 EMBL:AF132609
            EMBL:AB020708 EMBL:AJ011972 EMBL:BC013737 EMBL:BC069243
            IPI:IPI00005711 IPI:IPI00940882 RefSeq:NP_006035.2 UniGene:Hs.6764
            PDB:3C5K PDB:3GV4 PDB:3PHD PDBsum:3C5K PDBsum:3GV4 PDBsum:3PHD
            ProteinModelPortal:Q9UBN7 SMR:Q9UBN7 DIP:DIP-27544N IntAct:Q9UBN7
            MINT:MINT-238367 STRING:Q9UBN7 PhosphoSite:Q9UBN7 DMDM:205371758
            PaxDb:Q9UBN7 PRIDE:Q9UBN7 DNASU:10013 Ensembl:ENST00000334136
            Ensembl:ENST00000376619 GeneID:10013 KEGG:hsa:10013 UCSC:uc004dks.1
            CTD:10013 GeneCards:GC0XP048659 H-InvDB:HIX0016783 HGNC:HGNC:14064
            HPA:CAB004236 HPA:HPA003714 HPA:HPA026321 MIM:300272
            neXtProt:NX_Q9UBN7 Orphanet:163966 PharmGKB:PA29231
            HOVERGEN:HBG051894 InParanoid:Q9UBN7 PhylomeDB:Q9UBN7
            SABIO-RK:Q9UBN7 BindingDB:Q9UBN7 ChEMBL:CHEMBL1865 ChiTaRS:HDAC6
            EvolutionaryTrace:Q9UBN7 GenomeRNAi:10013 NextBio:37827
            ArrayExpress:Q9UBN7 Bgee:Q9UBN7 CleanEx:HS_HDAC6
            Genevestigator:Q9UBN7 GermOnline:ENSG00000094631 GO:GO:0070840
            GO:GO:0035967 GO:GO:0070846 GO:GO:0032418 GO:GO:0010727
            GO:GO:0043242 GO:GO:0070845 GO:GO:0060632 Uniprot:Q9UBN7
        Length = 1215

 Score = 233 (87.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
 Identities = 45/111 (40%), Positives = 64/111 (57%)

Query:   160 SVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQH 219
             +V  L  C HLVA      A + +   PC  C   + NW+CL C +V C RY+N HMLQH
Sbjct:  1106 AVTPLPWCPHLVAVCPIPAAGL-DVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQH 1164

Query:   220 YQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPVHETAYVLKFGRALP 270
             +  + H + L Y DLS WC+ C AY++ QA+L ++ +   A+  KFG  +P
Sbjct:  1165 HGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKNI---AHQNKFGEDMP 1212

 Score = 225 (84.3 bits), Expect = 2.9e-17, P = 2.9e-17
 Identities = 44/111 (39%), Positives = 61/111 (54%)

Query:    28 VRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY 87
             V  L  C HLVA      A +     PC  C   + NW+CL C +V C RY+N HML+H+
Sbjct:  1107 VTPLPWCPHLVAVCPIPAAGLDVTQ-PCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHH 1165

Query:    88 REKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPV-HETSYVLKFGRALP 137
                 H + L Y DLS WC+ C AY++ QA+L ++ + H+     KFG  +P
Sbjct:  1166 GNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKNIAHQN----KFGEDMP 1212

 Score = 37 (18.1 bits), Expect = 3.9e-19, Sum P(2) = 3.9e-19
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query:    76 SRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLN-AQAIL 118
             ++Y+N+  LR   +   SV L  +  S  C A  + L    A+L
Sbjct:   156 TQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVL 199


>UNIPROTKB|B4DZH6 [details] [associations]
            symbol:HDAC6 "Histone deacetylase 6" species:9606 "Homo
            sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0008270
            GO:GO:0016787 Gene3D:3.30.40.10 InterPro:IPR013083
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 EMBL:AF196971 HOGENOM:HOG000004769 IPI:IPI00005711
            UniGene:Hs.6764 HGNC:HGNC:14064 HOVERGEN:HBG051894 ChiTaRS:HDAC6
            EMBL:AK302926 ProteinModelPortal:B4DZH6 SMR:B4DZH6 STRING:B4DZH6
            PRIDE:B4DZH6 Ensembl:ENST00000444343 OMA:LQENWVC BindingDB:B4DZH6
            ArrayExpress:B4DZH6 Bgee:B4DZH6 Uniprot:B4DZH6
        Length = 1229

 Score = 233 (87.1 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
 Identities = 45/111 (40%), Positives = 64/111 (57%)

Query:   160 SVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQH 219
             +V  L  C HLVA      A + +   PC  C   + NW+CL C +V C RY+N HMLQH
Sbjct:  1120 AVTPLPWCPHLVAVCPIPAAGL-DVTQPCGDCGTIQENWVCLSCYQVYCGRYINGHMLQH 1178

Query:   220 YQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPVHETAYVLKFGRALP 270
             +  + H + L Y DLS WC+ C AY++ QA+L ++ +   A+  KFG  +P
Sbjct:  1179 HGNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKNI---AHQNKFGEDMP 1226

 Score = 225 (84.3 bits), Expect = 2.9e-17, P = 2.9e-17
 Identities = 44/111 (39%), Positives = 61/111 (54%)

Query:    28 VRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY 87
             V  L  C HLVA      A +     PC  C   + NW+CL C +V C RY+N HML+H+
Sbjct:  1121 VTPLPWCPHLVAVCPIPAAGLDVTQ-PCGDCGTIQENWVCLSCYQVYCGRYINGHMLQHH 1179

Query:    88 REKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPV-HETSYVLKFGRALP 137
                 H + L Y DLS WC+ C AY++ QA+L ++ + H+     KFG  +P
Sbjct:  1180 GNSGHPLVLSYIDLSAWCYYCQAYVHHQALLDVKNIAHQN----KFGEDMP 1226

 Score = 37 (18.1 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
 Identities = 13/44 (29%), Positives = 21/44 (47%)

Query:    76 SRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLN-AQAIL 118
             ++Y+N+  LR   +   SV L  +  S  C A  + L    A+L
Sbjct:   170 TQYMNEGELRVLADTYDSVYLHPNSYSCACLASGSVLRLVDAVL 213


>UNIPROTKB|I3LEZ7 [details] [associations]
            symbol:HDAC6 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0090035 "positive regulation of chaperone-mediated
            protein complex assembly" evidence=IEA] [GO:0071218 "cellular
            response to misfolded protein" evidence=IEA] [GO:0070848 "response
            to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
            deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
            assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
            evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            [GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
            protein binding" evidence=IEA] [GO:0045861 "negative regulation of
            proteolysis" evidence=IEA] [GO:0043241 "protein complex
            disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
            catabolic process via the multivesicular body sorting pathway"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
            evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
            [GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
            leading edge" evidence=IEA] [GO:0030286 "dynein complex"
            evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=IEA] [GO:0010469 "regulation of receptor activity"
            evidence=IEA] [GO:0009967 "positive regulation of signal
            transduction" evidence=IEA] [GO:0009636 "response to toxic
            substance" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
            protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
            complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
            GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
            GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
            GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
            GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC EMBL:FP565308
            Ensembl:ENSSSCT00000022405 Uniprot:I3LEZ7
        Length = 1130

 Score = 234 (87.4 bits), Expect = 2.9e-18, P = 2.9e-18
 Identities = 43/111 (38%), Positives = 66/111 (59%)

Query:   160 SVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQH 219
             +V  L  C H+VA      A + +   PC  C   + NW+CL C +V C RY+N HMLQH
Sbjct:  1021 AVSPLLWCPHVVAVRPVPEAGL-DVTQPCQDCGALQENWVCLSCYQVCCGRYINAHMLQH 1079

Query:   220 YQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPVHETAYVLKFGRALP 270
             ++ + H + L Y+DLS WC+ C AY++ +A+L ++ +   A+  KFG  +P
Sbjct:  1080 HESSGHPMVLSYADLSTWCYPCQAYVHHEALLAVKNI---AHQNKFGEGVP 1127

 Score = 223 (83.6 bits), Expect = 4.3e-17, P = 4.3e-17
 Identities = 42/111 (37%), Positives = 62/111 (55%)

Query:    28 VRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY 87
             V  L  C H+VA      A +     PC  C   + NW+CL C +V C RY+N HML+H+
Sbjct:  1022 VSPLLWCPHVVAVRPVPEAGLDVTQ-PCQDCGALQENWVCLSCYQVCCGRYINAHMLQHH 1080

Query:    88 REKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPV-HETSYVLKFGRALP 137
                 H + L Y+DLS WC+ C AY++ +A+L ++ + H+     KFG  +P
Sbjct:  1081 ESSGHPMVLSYADLSTWCYPCQAYVHHEALLAVKNIAHQN----KFGEGVP 1127


>UNIPROTKB|F1MQP3 [details] [associations]
            symbol:HDAC6 "Uncharacterized protein" species:9913 "Bos
            taurus" [GO:0090035 "positive regulation of chaperone-mediated
            protein complex assembly" evidence=IEA] [GO:0071218 "cellular
            response to misfolded protein" evidence=IEA] [GO:0070848 "response
            to growth factor stimulus" evidence=IEA] [GO:0070846 "Hsp90
            deacetylation" evidence=IEA] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=IEA] [GO:0070842 "aggresome
            assembly" evidence=IEA] [GO:0070840 "dynein complex binding"
            evidence=IEA] [GO:0070301 "cellular response to hydrogen peroxide"
            evidence=IEA] [GO:0051879 "Hsp90 protein binding" evidence=IEA]
            [GO:0048487 "beta-tubulin binding" evidence=IEA] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0048156 "tau
            protein binding" evidence=IEA] [GO:0045861 "negative regulation of
            proteolysis" evidence=IEA] [GO:0043241 "protein complex
            disassembly" evidence=IEA] [GO:0043162 "ubiquitin-dependent protein
            catabolic process via the multivesicular body sorting pathway"
            evidence=IEA] [GO:0043065 "positive regulation of apoptotic
            process" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
            evidence=IEA] [GO:0042903 "tubulin deacetylase activity"
            evidence=IEA] [GO:0042826 "histone deacetylase binding"
            evidence=IEA] [GO:0034983 "peptidyl-lysine deacetylation"
            evidence=IEA] [GO:0032418 "lysosome localization" evidence=IEA]
            [GO:0031593 "polyubiquitin binding" evidence=IEA] [GO:0031252 "cell
            leading edge" evidence=IEA] [GO:0030286 "dynein complex"
            evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=IEA] [GO:0010469 "regulation of receptor activity"
            evidence=IEA] [GO:0009967 "positive regulation of signal
            transduction" evidence=IEA] [GO:0009636 "response to toxic
            substance" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
            protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
            complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
            GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
            GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
            GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
            GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
            EMBL:DAAA02073075 EMBL:DAAA02073074 IPI:IPI00713432
            Ensembl:ENSBTAT00000017618 ArrayExpress:F1MQP3 Uniprot:F1MQP3
        Length = 1128

 Score = 232 (86.7 bits), Expect = 4.7e-18, P = 4.7e-18
 Identities = 47/123 (38%), Positives = 69/123 (56%)

Query:   148 EDDEMMLGAESGSVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVL 207
             + DE+M  A    VR L  C HL A        + N   PC  C   + NW+CL C +V 
Sbjct:  1011 DTDEVMFYA----VRPLLWCPHLAAVCPIPETGL-NVTQPCQDCGTLQENWVCLSCYQVY 1065

Query:   208 CSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPVHETAYVLKFGR 267
             C RY+N HMLQH++ + H + L Y+DLS WC+ C AY++ + +L ++ +   A+  KFG 
Sbjct:  1066 CGRYINAHMLQHHEGSGHPLVLSYADLSAWCYHCQAYVHHKDLLAVKNI---AHQNKFGE 1122

Query:   268 ALP 270
              +P
Sbjct:  1123 DIP 1125

 Score = 217 (81.4 bits), Expect = 1.9e-16, P = 1.9e-16
 Identities = 45/124 (36%), Positives = 65/124 (52%)

Query:    15 DEDEMMIGGELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVL 74
             D DE+M       VR L  C HL A        +     PC  C   + NW+CL C +V 
Sbjct:  1011 DTDEVMFYA----VRPLLWCPHLAAVCPIPETGLNVTQ-PCQDCGTLQENWVCLSCYQVY 1065

Query:    75 CSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPV-HETSYVLKFG 133
             C RY+N HML+H+    H + L Y+DLS WC+ C AY++ + +L ++ + H+     KFG
Sbjct:  1066 CGRYINAHMLQHHEGSGHPLVLSYADLSAWCYHCQAYVHHKDLLAVKNIAHQN----KFG 1121

Query:   134 RALP 137
               +P
Sbjct:  1122 EDIP 1125


>MGI|MGI:1333752 [details] [associations]
            symbol:Hdac6 "histone deacetylase 6" species:10090 "Mus
            musculus" [GO:0000118 "histone deacetylase complex" evidence=ISO]
            [GO:0000209 "protein polyubiquitination" evidence=IDA] [GO:0003779
            "actin binding" evidence=IEA] [GO:0004407 "histone deacetylase
            activity" evidence=ISO;IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            [GO:0005874 "microtubule" evidence=ISO] [GO:0005875 "microtubule
            associated complex" evidence=ISO] [GO:0005881 "cytoplasmic
            microtubule" evidence=IDA] [GO:0005901 "caveola" evidence=ISO]
            [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
            [GO:0006355 "regulation of transcription, DNA-dependent"
            evidence=IEA] [GO:0006476 "protein deacetylation" evidence=ISO;IDA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IGI;IMP] [GO:0006515 "misfolded or incompletely
            synthesized protein catabolic process" evidence=ISO] [GO:0006886
            "intracellular protein transport" evidence=ISO] [GO:0007026
            "negative regulation of microtubule depolymerization" evidence=IDA]
            [GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0008017
            "microtubule binding" evidence=ISO;IDA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0009636 "response to toxic substance"
            evidence=ISO] [GO:0009967 "positive regulation of signal
            transduction" evidence=ISO] [GO:0010033 "response to organic
            substance" evidence=ISO] [GO:0010469 "regulation of receptor
            activity" evidence=ISO] [GO:0010634 "positive regulation of
            epithelial cell migration" evidence=ISO] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=ISO]
            [GO:0016234 "inclusion body" evidence=ISO] [GO:0016235 "aggresome"
            evidence=ISO] [GO:0016236 "macroautophagy" evidence=ISO]
            [GO:0016568 "chromatin modification" evidence=IEA] [GO:0016575
            "histone deacetylation" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0031078 "histone deacetylase activity
            (H3-K14 specific)" evidence=IEA] [GO:0031252 "cell leading edge"
            evidence=ISO] [GO:0031593 "polyubiquitin binding" evidence=ISO]
            [GO:0032041 "NAD-dependent histone deacetylase activity (H3-K14
            specific)" evidence=IEA] [GO:0032129 "histone deacetylase activity
            (H3-K9 specific)" evidence=IEA] [GO:0032418 "lysosome localization"
            evidence=ISO] [GO:0034739 "histone deacetylase activity (H4-K16
            specific)" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=ISO] [GO:0035967 "cellular response to
            topologically incorrect protein" evidence=ISO] [GO:0042826 "histone
            deacetylase binding" evidence=ISO] [GO:0042903 "tubulin deacetylase
            activity" evidence=ISO;IDA] [GO:0043014 "alpha-tubulin binding"
            evidence=ISO] [GO:0043065 "positive regulation of apoptotic
            process" evidence=ISO] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0043162 "ubiquitin-dependent protein catabolic
            process via the multivesicular body sorting pathway" evidence=IMP]
            [GO:0043234 "protein complex" evidence=IPI] [GO:0043241 "protein
            complex disassembly" evidence=IGI] [GO:0043242 "negative regulation
            of protein complex disassembly" evidence=ISO] [GO:0045861 "negative
            regulation of proteolysis" evidence=ISO] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0046969 "NAD-dependent histone
            deacetylase activity (H3-K9 specific)" evidence=IEA] [GO:0046970
            "NAD-dependent histone deacetylase activity (H4-K16 specific)"
            evidence=IEA] [GO:0048156 "tau protein binding" evidence=ISO]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
            [GO:0048487 "beta-tubulin binding" evidence=IDA] [GO:0051788
            "response to misfolded protein" evidence=ISO] [GO:0051879 "Hsp90
            protein binding" evidence=ISO] [GO:0070201 "regulation of
            establishment of protein localization" evidence=IMP] [GO:0070301
            "cellular response to hydrogen peroxide" evidence=ISO] [GO:0070840
            "dynein complex binding" evidence=ISO] [GO:0070842 "aggresome
            assembly" evidence=ISO;IGI] [GO:0070845 "polyubiquitinated
            misfolded protein transport" evidence=ISO] [GO:0070846 "Hsp90
            deacetylation" evidence=ISO;IMP] [GO:0070848 "response to growth
            factor stimulus" evidence=ISO] [GO:0070932 "histone H3
            deacetylation" evidence=IEA] [GO:0070933 "histone H4 deacetylation"
            evidence=IEA] [GO:0071218 "cellular response to misfolded protein"
            evidence=IMP] [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=ISO]
            [GO:0090042 "tubulin deacetylation" evidence=ISO;IDA;IMP]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            EMBL:AF006603 MGI:MGI:1333752 Pfam:PF00850 INTERPRO:IPR000286
            GO:GO:0005829 GO:GO:0005634 GO:GO:0048471 GO:GO:0031252
            GO:GO:0010469 GO:GO:0006355 GO:GO:0070301 GO:GO:0046872
            GO:GO:0009636 GO:GO:0008270 GO:GO:0045861 GO:GO:0006351
            GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0005901 GO:GO:0016235 GO:GO:0006515 GO:GO:0048487
            GO:GO:0008017 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0043130 GO:GO:0071218 GO:GO:0070932 GO:GO:0070933
            GO:GO:0000118 GO:GO:0090035 eggNOG:COG0123 KO:K11407 GO:GO:0032041
            GO:GO:0097372 GO:GO:0046969 GO:GO:0046970 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 EMBL:AL670169
            OrthoDB:EOG40P464 GO:GO:0004407 GeneTree:ENSGT00530000062809
            GO:GO:0042903 HOGENOM:HOG000004769 GO:GO:0034983 CTD:10013
            HOVERGEN:HBG051894 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
            IPI:IPI00323705 PIR:T13964 RefSeq:NP_001123888.1 RefSeq:NP_034543.3
            UniGene:Mm.29854 ProteinModelPortal:Q9Z2V5 SMR:Q9Z2V5 IntAct:Q9Z2V5
            MINT:MINT-220628 STRING:Q9Z2V5 PhosphoSite:Q9Z2V5 PaxDb:Q9Z2V5
            PRIDE:Q9Z2V5 Ensembl:ENSMUST00000033501 Ensembl:ENSMUST00000115642
            GeneID:15185 KEGG:mmu:15185 BindingDB:Q9Z2V5 ChEMBL:CHEMBL2878
            NextBio:287707 Bgee:Q9Z2V5 CleanEx:MM_HDAC6 Genevestigator:Q9Z2V5
            GermOnline:ENSMUSG00000031161 Uniprot:Q9Z2V5
        Length = 1149

 Score = 221 (82.9 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
 Identities = 43/111 (38%), Positives = 62/111 (55%)

Query:   160 SVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQH 219
             +V  L+ C HL+A      A + +   PC  C   + NW+CL C +V CSRYVN HM+ H
Sbjct:  1040 AVTPLSWCPHLMAVCPIPAAGL-DVSQPCKTCGTVQENWVCLTCYQVYCSRYVNAHMVCH 1098

Query:   220 YQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPVHETAYVLKFGRALP 270
             ++ + H + L   DLS WC+ C AY++ +    LQ V   A+  KFG  +P
Sbjct:  1099 HEASEHPLVLSCVDLSTWCYVCQAYVHHE---DLQDVKNAAHQNKFGEDMP 1146

 Score = 209 (78.6 bits), Expect = 1.4e-15, P = 1.4e-15
 Identities = 41/110 (37%), Positives = 58/110 (52%)

Query:    28 VRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY 87
             V  L+ C HL+A      A +     PC  C   + NW+CL C +V CSRYVN HM+ H+
Sbjct:  1041 VTPLSWCPHLMAVCPIPAAGLDVSQ-PCKTCGTVQENWVCLTCYQVYCSRYVNAHMVCHH 1099

Query:    88 REKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPVHETSYVLKFGRALP 137
                 H + L   DLS WC+ C AY++ +    L+ V   ++  KFG  +P
Sbjct:  1100 EASEHPLVLSCVDLSTWCYVCQAYVHHE---DLQDVKNAAHQNKFGEDMP 1146

 Score = 38 (18.4 bits), Expect = 4.9e-18, Sum P(2) = 4.9e-18
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query:    76 SRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYL 112
             ++Y+N+  LR   E   SV L  +  S  C A  + L
Sbjct:   155 TQYMNEGELRVLAETYDSVYLHPNSYSCACLATGSVL 191


>UNIPROTKB|F1LSE3 [details] [associations]
            symbol:Hdac6 "Protein Hdac6" species:10116 "Rattus
            norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001607
            Pfam:PF02148 PROSITE:PS50271 SMART:SM00290 Pfam:PF00850 RGD:619981
            INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471 GO:GO:0031252
            GO:GO:0010469 GO:GO:0070301 GO:GO:0009636 GO:GO:0008270
            GO:GO:0045861 GO:GO:0043065 GO:GO:0009967 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235 GO:GO:0006515
            GO:GO:0000209 GO:GO:0070848 GO:GO:0005881 GO:GO:0007026
            GO:GO:0016236 GO:GO:0010634 GO:GO:0030286 GO:GO:0071218
            GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241 GO:GO:0043162
            GO:GO:0070842 GO:GO:0010870 GO:GO:0004407 GO:GO:0042903
            GO:GO:0034983 GO:GO:0070846 GO:GO:0032418 GO:GO:0070845
            IPI:IPI00200498 Ensembl:ENSRNOT00000009295 ArrayExpress:F1LSE3
            Uniprot:F1LSE3
        Length = 1155

 Score = 226 (84.6 bits), Expect = 2.1e-17, P = 2.1e-17
 Identities = 44/113 (38%), Positives = 63/113 (55%)

Query:   160 SVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQH 219
             +V  L+ C HL+A      A + +   PC  C   + NW+CL C +V CSRYVN HM+ H
Sbjct:  1046 AVTPLSWCPHLMAVCPIPAAGL-DVSQPCKTCGSVQENWVCLTCYQVYCSRYVNAHMVCH 1104

Query:   220 YQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPVHETAYVLKFGRALPFL 272
             ++ + H + L   DLS WC+ C AY++ +    LQ V   A+  KFG  +P L
Sbjct:  1105 HEASEHPLVLSCVDLSTWCYLCQAYVHHE---DLQDVKNAAHQNKFGEGMPHL 1154

 Score = 211 (79.3 bits), Expect = 8.4e-16, P = 8.4e-16
 Identities = 41/110 (37%), Positives = 58/110 (52%)

Query:    28 VRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY 87
             V  L+ C HL+A      A +     PC  C   + NW+CL C +V CSRYVN HM+ H+
Sbjct:  1047 VTPLSWCPHLMAVCPIPAAGLDVSQ-PCKTCGSVQENWVCLTCYQVYCSRYVNAHMVCHH 1105

Query:    88 REKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPVHETSYVLKFGRALP 137
                 H + L   DLS WC+ C AY++ +    L+ V   ++  KFG  +P
Sbjct:  1106 EASEHPLVLSCVDLSTWCYLCQAYVHHE---DLQDVKNAAHQNKFGEGMP 1152


>UNIPROTKB|F1PN11 [details] [associations]
            symbol:HDAC6 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0090035 "positive regulation of
            chaperone-mediated protein complex assembly" evidence=IEA]
            [GO:0071218 "cellular response to misfolded protein" evidence=IEA]
            [GO:0070848 "response to growth factor stimulus" evidence=IEA]
            [GO:0070846 "Hsp90 deacetylation" evidence=IEA] [GO:0070845
            "polyubiquitinated misfolded protein transport" evidence=IEA]
            [GO:0070842 "aggresome assembly" evidence=IEA] [GO:0070840 "dynein
            complex binding" evidence=IEA] [GO:0070301 "cellular response to
            hydrogen peroxide" evidence=IEA] [GO:0051879 "Hsp90 protein
            binding" evidence=IEA] [GO:0048487 "beta-tubulin binding"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0048156 "tau protein binding" evidence=IEA]
            [GO:0045861 "negative regulation of proteolysis" evidence=IEA]
            [GO:0043241 "protein complex disassembly" evidence=IEA] [GO:0043162
            "ubiquitin-dependent protein catabolic process via the
            multivesicular body sorting pathway" evidence=IEA] [GO:0043065
            "positive regulation of apoptotic process" evidence=IEA]
            [GO:0043014 "alpha-tubulin binding" evidence=IEA] [GO:0042903
            "tubulin deacetylase activity" evidence=IEA] [GO:0042826 "histone
            deacetylase binding" evidence=IEA] [GO:0034983 "peptidyl-lysine
            deacetylation" evidence=IEA] [GO:0032418 "lysosome localization"
            evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
            [GO:0031252 "cell leading edge" evidence=IEA] [GO:0030286 "dynein
            complex" evidence=IEA] [GO:0016236 "macroautophagy" evidence=IEA]
            [GO:0016235 "aggresome" evidence=IEA] [GO:0010870 "positive
            regulation of receptor biosynthetic process" evidence=IEA]
            [GO:0010634 "positive regulation of epithelial cell migration"
            evidence=IEA] [GO:0010469 "regulation of receptor activity"
            evidence=IEA] [GO:0009967 "positive regulation of signal
            transduction" evidence=IEA] [GO:0009636 "response to toxic
            substance" evidence=IEA] [GO:0008017 "microtubule binding"
            evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
            [GO:0007026 "negative regulation of microtubule depolymerization"
            evidence=IEA] [GO:0006515 "misfolded or incompletely synthesized
            protein catabolic process" evidence=IEA] [GO:0005901 "caveola"
            evidence=IEA] [GO:0005881 "cytoplasmic microtubule" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0004407 "histone
            deacetylase activity" evidence=IEA] [GO:0000209 "protein
            polyubiquitination" evidence=IEA] [GO:0000118 "histone deacetylase
            complex" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005829 GO:GO:0048471
            GO:GO:0031252 GO:GO:0010469 GO:GO:0070301 GO:GO:0009636
            GO:GO:0008270 GO:GO:0045861 GO:GO:0043065 GO:GO:0009967
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0005901 GO:GO:0016235
            GO:GO:0006515 GO:GO:0000209 GO:GO:0070848 GO:GO:0005881
            GO:GO:0007026 GO:GO:0016236 GO:GO:0010634 GO:GO:0030286
            GO:GO:0071218 GO:GO:0000118 GO:GO:0090035 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0043241
            GO:GO:0043162 GO:GO:0070842 GO:GO:0010870 GO:GO:0004407
            GeneTree:ENSGT00530000062809 GO:GO:0042903 GO:GO:0034983
            GO:GO:0070846 GO:GO:0032418 GO:GO:0070845 OMA:LQENWVC
            EMBL:AAEX03026338 Ensembl:ENSCAFT00000024781 Uniprot:F1PN11
        Length = 1157

 Score = 225 (84.3 bits), Expect = 2.7e-17, P = 2.7e-17
 Identities = 43/111 (38%), Positives = 65/111 (58%)

Query:   160 SVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQH 219
             +V  L  C HLVA      + + +   PC  C   + NW+CL C +V C RY++ HML H
Sbjct:  1048 AVTPLPWCPHLVAVCPIPESGL-DVTQPCQDCGVLQENWVCLSCYQVYCGRYISAHMLHH 1106

Query:   220 YQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPVHETAYVLKFGRALP 270
             ++++ H + L Y DLS WC+ C AY++ QA+L ++ V   A+  KFG  +P
Sbjct:  1107 HEDSGHPLVLSYVDLSTWCYNCEAYVHHQALLDVKNV---AHQNKFGEDMP 1154

 Score = 219 (82.2 bits), Expect = 1.2e-16, P = 1.2e-16
 Identities = 43/111 (38%), Positives = 61/111 (54%)

Query:    28 VRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY 87
             V  L  C HLVA      + +     PC  C   + NW+CL C +V C RY++ HML H+
Sbjct:  1049 VTPLPWCPHLVAVCPIPESGLDVTQ-PCQDCGVLQENWVCLSCYQVYCGRYISAHMLHHH 1107

Query:    88 REKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPV-HETSYVLKFGRALP 137
              +  H + L Y DLS WC+ C AY++ QA+L ++ V H+     KFG  +P
Sbjct:  1108 EDSGHPLVLSYVDLSTWCYNCEAYVHHQALLDVKNVAHQN----KFGEDMP 1154


>FB|FBgn0026428 [details] [associations]
            symbol:HDAC6 "HDAC6" species:7227 "Drosophila melanogaster"
            [GO:0004407 "histone deacetylase activity" evidence=ISS;IDA;NAS]
            [GO:0016575 "histone deacetylation" evidence=IDA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0006099 "tricarboxylic acid cycle" evidence=IDA]
            [GO:0022904 "respiratory electron transport chain" evidence=IDA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 SMART:SM00290
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005737 GO:GO:0006355
            EMBL:AE014298 GO:GO:0008270 GO:GO:0006099 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0022904 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 GO:GO:0004407
            GeneTree:ENSGT00530000062809 CTD:10013 OMA:LQENWVC EMBL:FJ764839
            EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
            EMBL:FJ764854 EMBL:FJ764856 EMBL:FJ764858 EMBL:FJ764836
            EMBL:FJ764837 EMBL:FJ764840 EMBL:FJ764844 EMBL:FJ764846
            EMBL:FJ764849 EMBL:FJ764850 UniGene:Dm.3238 GeneID:32461
            KEGG:dme:Dmel_CG6170 FlyBase:FBgn0026428 GenomeRNAi:32461
            NextBio:778581 RefSeq:NP_727843.1 SMR:Q8IR37 STRING:Q8IR37
            EnsemblMetazoa:FBtr0074009 UCSC:CG6170-RC InParanoid:Q8IR37
            Uniprot:Q8IR37
        Length = 1138

 Score = 220 (82.5 bits), Expect = 9.0e-17, P = 9.0e-17
 Identities = 48/132 (36%), Positives = 68/132 (51%)

Query:   140 TGQHPKVK---------EDDEMMLGAESGSVRHLTSCDHLVASLSTDLARIPNPDTPCNR 190
             +G  PKVK         E+ E +  +E  +V  L +C HL      +  R  +    C+ 
Sbjct:   960 SGSKPKVKVKTLSDYLAENKEALEQSEMFAVYPLKTCPHLRLLRPEEAPRSLDSGAECSV 1019

Query:   191 CQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLNAQAI 250
             C     NW+CL C+ V C RYVN HM QH  E  H +A+  +DLSVWC+AC AY++   +
Sbjct:  1020 CGSTGENWVCLSCRHVACGRYVNAHMEQHSVEEQHPLAMSTADLSVWCYACSAYVDHPRL 1079

Query:   251 LQ-LQPVHETAY 261
                L P+HE  +
Sbjct:  1080 YAYLNPLHEDKF 1091

 Score = 214 (80.4 bits), Expect = 3.9e-16, P = 3.9e-16
 Identities = 46/127 (36%), Positives = 65/127 (51%)

Query:     3 TYSSKLPENGPEDEDEMMIGGELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPR 62
             T S  L EN      E +   E+  V  L +C HL      +  R       C++C    
Sbjct:   970 TLSDYLAEN-----KEALEQSEMFAVYPLKTCPHLRLLRPEEAPRSLDSGAECSVCGSTG 1024

Query:    63 GNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQ-LR 121
              NW+CL C+ V C RYVN HM +H  E+ H +A+  +DLSVWC+AC AY++   +   L 
Sbjct:  1025 ENWVCLSCRHVACGRYVNAHMEQHSVEEQHPLAMSTADLSVWCYACSAYVDHPRLYAYLN 1084

Query:   122 PVHETSY 128
             P+HE  +
Sbjct:  1085 PLHEDKF 1091


>UNIPROTKB|G8JYB7 [details] [associations]
            symbol:hda-6 "Protein HDA-6, isoform d" species:6239
            "Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
            evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 KO:K11407 PANTHER:PTHR10625 EMBL:FO081367
            GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
            KEGG:cel:CELE_F41H10.6 CTD:177316 GO:GO:0033558
            RefSeq:NP_001255270.1 ProteinModelPortal:G8JYB7 SMR:G8JYB7
            EnsemblMetazoa:F41H10.6d WormBase:F41H10.6d Uniprot:G8JYB7
        Length = 138

 Score = 203 (76.5 bits), Expect = 2.3e-16, P = 2.3e-16
 Identities = 42/121 (34%), Positives = 66/121 (54%)

Query:   151 EMMLGAESGSVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSR 210
             E+M    + +V  L +C HL        A+I N  T C+ CQ     W CL C +  C R
Sbjct:    22 EIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIGAEVWTCLTCYKYNCGR 80

Query:   211 YVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPV-HETAYVLKFGRAL 269
             +VN+H + H+  ++H +AL  +DLSVWC+ C +Y++  A++  +   HE+    KFG  +
Sbjct:    81 FVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKSAAHES----KFGETM 136

Query:   270 P 270
             P
Sbjct:   137 P 137

 Score = 196 (74.1 bits), Expect = 1.3e-15, P = 1.3e-15
 Identities = 43/126 (34%), Positives = 65/126 (51%)

Query:    13 PEDEDEMMIGGELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKE 72
             P    E+M  G    V  LA+C HL        A+I    T C+ C+     W CL C +
Sbjct:    17 PSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIGAEVWTCLTCYK 75

Query:    73 VLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPV-HETSYVLK 131
               C R+VN+H + H+   +H +AL  +DLSVWC+ C +Y++  A++  +   HE+    K
Sbjct:    76 YNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKSAAHES----K 131

Query:   132 FGRALP 137
             FG  +P
Sbjct:   132 FGETMP 137


>UNIPROTKB|Q20296 [details] [associations]
            symbol:hda-6 "Histone deacetylase 6" species:6239
            "Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
            evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0005634 GO:GO:0006355
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0070932 GO:GO:0070933 eggNOG:COG0123
            KO:K11407 GO:GO:0032041 GO:GO:0097372 GO:GO:0046969 GO:GO:0046970
            Gene3D:3.40.800.20 InterPro:IPR023801 PANTHER:PTHR10625
            PRINTS:PR01270 EMBL:FO081367 GeneTree:ENSGT00530000062809
            RefSeq:NP_500787.1 RefSeq:NP_500788.1 UniGene:Cel.12964
            ProteinModelPortal:Q20296 SMR:Q20296 STRING:Q20296 PaxDb:Q20296
            PRIDE:Q20296 EnsemblMetazoa:F41H10.6b GeneID:177316
            KEGG:cel:CELE_F41H10.6 UCSC:Y51H1A.5.1 CTD:177316
            WormBase:F41H10.6a WormBase:F41H10.6b HOGENOM:HOG000004769
            NextBio:896234 ArrayExpress:Q20296 GO:GO:0033558 Uniprot:Q20296
        Length = 955

 Score = 203 (76.5 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
 Identities = 42/121 (34%), Positives = 66/121 (54%)

Query:   151 EMMLGAESGSVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSR 210
             E+M    + +V  L +C HL        A+I N  T C+ CQ     W CL C +  C R
Sbjct:   839 EIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIGAEVWTCLTCYKYNCGR 897

Query:   211 YVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPV-HETAYVLKFGRAL 269
             +VN+H + H+  ++H +AL  +DLSVWC+ C +Y++  A++  +   HE+    KFG  +
Sbjct:   898 FVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKSAAHES----KFGETM 953

Query:   270 P 270
             P
Sbjct:   954 P 954

 Score = 196 (74.1 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 43/126 (34%), Positives = 65/126 (51%)

Query:    13 PEDEDEMMIGGELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKE 72
             P    E+M  G    V  LA+C HL        A+I    T C+ C+     W CL C +
Sbjct:   834 PSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIGAEVWTCLTCYK 892

Query:    73 VLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPV-HETSYVLK 131
               C R+VN+H + H+   +H +AL  +DLSVWC+ C +Y++  A++  +   HE+    K
Sbjct:   893 YNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKSAAHES----K 948

Query:   132 FGRALP 137
             FG  +P
Sbjct:   949 FGETMP 954

 Score = 42 (19.8 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
 Identities = 20/92 (21%), Positives = 37/92 (40%)

Query:    72 EVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPVHETSY-VL 130
             + +C    N+ MLR  RE+    A     +   C         + I ++  V +  + +L
Sbjct:   741 QAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCI--------KTIREVCAVQQKYWSIL 792

Query:   131 KFGRALPFNTGQH--PKVKEDDEMMLGAESGS 160
             K  +  P N G     +  +DD + +  +S S
Sbjct:   793 KGFQVTPSNYGLDIDDEAYDDDSIDMADQSSS 824


>WB|WBGene00018319 [details] [associations]
            symbol:hda-6 species:6239 "Caenorhabditis elegans"
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0033558 "protein
            deacetylase activity" evidence=ISS] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20
            InterPro:IPR023801 PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
            GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
            KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
            NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
            ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
            EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
            InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
        Length = 957

 Score = 203 (76.5 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
 Identities = 42/121 (34%), Positives = 66/121 (54%)

Query:   151 EMMLGAESGSVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSR 210
             E+M    + +V  L +C HL        A+I N  T C+ CQ     W CL C +  C R
Sbjct:   841 EIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIGAEVWTCLTCYKYNCGR 899

Query:   211 YVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPV-HETAYVLKFGRAL 269
             +VN+H + H+  ++H +AL  +DLSVWC+ C +Y++  A++  +   HE+    KFG  +
Sbjct:   900 FVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKSAAHES----KFGETM 955

Query:   270 P 270
             P
Sbjct:   956 P 956

 Score = 196 (74.1 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 43/126 (34%), Positives = 65/126 (51%)

Query:    13 PEDEDEMMIGGELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKE 72
             P    E+M  G    V  LA+C HL        A+I    T C+ C+     W CL C +
Sbjct:   836 PSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIGAEVWTCLTCYK 894

Query:    73 VLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPV-HETSYVLK 131
               C R+VN+H + H+   +H +AL  +DLSVWC+ C +Y++  A++  +   HE+    K
Sbjct:   895 YNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKSAAHES----K 950

Query:   132 FGRALP 137
             FG  +P
Sbjct:   951 FGETMP 956

 Score = 42 (19.8 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
 Identities = 20/92 (21%), Positives = 37/92 (40%)

Query:    72 EVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPVHETSY-VL 130
             + +C    N+ MLR  RE+    A     +   C         + I ++  V +  + +L
Sbjct:   743 QAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCI--------KTIREVCAVQQKYWSIL 794

Query:   131 KFGRALPFNTGQH--PKVKEDDEMMLGAESGS 160
             K  +  P N G     +  +DD + +  +S S
Sbjct:   795 KGFQVTPSNYGLDIDDEAYDDDSIDMADQSSS 826


>UNIPROTKB|A7LPD8 [details] [associations]
            symbol:hda-6 "Protein HDA-6, isoform c" species:6239
            "Caenorhabditis elegans" [GO:0006476 "protein deacetylation"
            evidence=ISS] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            Pfam:PF00850 INTERPRO:IPR000286 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 KO:K11407 Gene3D:3.40.800.20 InterPro:IPR023801
            PANTHER:PTHR10625 PRINTS:PR01270 EMBL:FO081367
            GeneTree:ENSGT00530000062809 UniGene:Cel.12964 GeneID:177316
            KEGG:cel:CELE_F41H10.6 CTD:177316 HOGENOM:HOG000004769
            NextBio:896234 GO:GO:0033558 OMA:LQENWVC RefSeq:NP_001122780.1
            ProteinModelPortal:A7LPD8 SMR:A7LPD8 STRING:A7LPD8
            EnsemblMetazoa:F41H10.6c UCSC:F41H10.6c WormBase:F41H10.6c
            InParanoid:A7LPD8 ArrayExpress:A7LPD8 Uniprot:A7LPD8
        Length = 957

 Score = 203 (76.5 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
 Identities = 42/121 (34%), Positives = 66/121 (54%)

Query:   151 EMMLGAESGSVRHLTSCDHLVASLSTDLARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSR 210
             E+M    + +V  L +C HL        A+I N  T C+ CQ     W CL C +  C R
Sbjct:   841 EIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIGAEVWTCLTCYKYNCGR 899

Query:   211 YVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLNAQAILQLQPV-HETAYVLKFGRAL 269
             +VN+H + H+  ++H +AL  +DLSVWC+ C +Y++  A++  +   HE+    KFG  +
Sbjct:   900 FVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKSAAHES----KFGETM 955

Query:   270 P 270
             P
Sbjct:   956 P 956

 Score = 196 (74.1 bits), Expect = 3.4e-13, P = 3.4e-13
 Identities = 43/126 (34%), Positives = 65/126 (51%)

Query:    13 PEDEDEMMIGGELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKE 72
             P    E+M  G    V  LA+C HL        A+I    T C+ C+     W CL C +
Sbjct:   836 PSHNLEIMDSGPAHAVVPLATCPHLKEVKPLPPAKI-NARTACSECQIGAEVWTCLTCYK 894

Query:    73 VLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPV-HETSYVLK 131
               C R+VN+H + H+   +H +AL  +DLSVWC+ C +Y++  A++  +   HE+    K
Sbjct:   895 YNCGRFVNEHAMMHHLSSSHPMALSMADLSVWCYPCDSYVHNPALIGAKSAAHES----K 950

Query:   132 FGRALP 137
             FG  +P
Sbjct:   951 FGETMP 956

 Score = 42 (19.8 bits), Expect = 7.9e-16, Sum P(2) = 7.9e-16
 Identities = 20/92 (21%), Positives = 37/92 (40%)

Query:    72 EVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLNAQAILQLRPVHETSY-VL 130
             + +C    N+ MLR  RE+    A     +   C         + I ++  V +  + +L
Sbjct:   743 QAVCEVLQNRSMLRRLREEKEQFATKPQKIESSCI--------KTIREVCAVQQKYWSIL 794

Query:   131 KFGRALPFNTGQH--PKVKEDDEMMLGAESGS 160
             K  +  P N G     +  +DD + +  +S S
Sbjct:   795 KGFQVTPSNYGLDIDDEAYDDDSIDMADQSSS 826


>UNIPROTKB|F8VRW0 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
            assembly checkpoint" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 EMBL:AC018475 HGNC:HGNC:20064 IPI:IPI01022557
            ProteinModelPortal:F8VRW0 SMR:F8VRW0 Ensembl:ENST00000551837
            ArrayExpress:F8VRW0 Bgee:F8VRW0 Uniprot:F8VRW0
        Length = 164

 Score = 163 (62.4 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 34/104 (32%), Positives = 54/104 (51%)

Query:   164 LTSCDHL-VASLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             + +C H+    L+ D + + NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     4 MDTCKHVGQLQLAQDHSSL-NPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E++H VAL  +++ V+C+ C  Y LN      L+ +  T   +K
Sbjct:    63 ESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106

 Score = 161 (61.7 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 31/101 (30%), Positives = 51/101 (50%)

Query:    33 SCDHL-VASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKN 91
             +C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E +
Sbjct:     6 TCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESS 65

Query:    92 HSVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
             H VAL+ +++ V+C+ C  Y LN      L+ +  T   +K
Sbjct:    66 HPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106


>UNIPROTKB|F8VVD6 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
            assembly checkpoint" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 SMART:SM00290 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 EMBL:AC018475 HGNC:HGNC:20064 IPI:IPI01021117
            ProteinModelPortal:F8VVD6 SMR:F8VVD6 Ensembl:ENST00000549639
            ArrayExpress:F8VVD6 Bgee:F8VVD6 Uniprot:F8VVD6
        Length = 111

 Score = 163 (62.4 bits), Expect = 6.8e-12, P = 6.8e-12
 Identities = 34/104 (32%), Positives = 54/104 (51%)

Query:   164 LTSCDHL-VASLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             + +C H+    L+ D + + NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     4 MDTCKHVGQLQLAQDHSSL-NPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E++H VAL  +++ V+C+ C  Y LN      L+ +  T   +K
Sbjct:    63 ESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106

 Score = 161 (61.7 bits), Expect = 1.2e-11, P = 1.2e-11
 Identities = 31/101 (30%), Positives = 51/101 (50%)

Query:    33 SCDHL-VASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKN 91
             +C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E +
Sbjct:     6 TCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESS 65

Query:    92 HSVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
             H VAL+ +++ V+C+ C  Y LN      L+ +  T   +K
Sbjct:    66 HPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106


>DICTYBASE|DDB_G0283917 [details] [associations]
            symbol:sir2A "UBP-type zinc finger-containing
            protein" species:44689 "Dictyostelium discoideum" [GO:0070403 "NAD+
            binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001607
            InterPro:IPR003000 Pfam:PF02146 Pfam:PF02148 PROSITE:PS50271
            dictyBase:DDB_G0283917 GenomeReviews:CM000153_GR GO:GO:0070403
            GO:GO:0046872 GO:GO:0008270 GO:GO:0016787 Gene3D:3.30.40.10
            InterPro:IPR013083 EMBL:AAFI02000058 eggNOG:COG0846
            Gene3D:3.30.1600.10 InterPro:IPR026591 InterPro:IPR026590
            PANTHER:PTHR11085 PROSITE:PS50305 RefSeq:XP_638798.1
            ProteinModelPortal:Q54QE6 SMR:Q54QE6 EnsemblProtists:DDB0216430
            GeneID:8624322 KEGG:ddi:DDB_G0283917 InParanoid:Q54QE6 KO:K11412
            OMA:CNDESEN Uniprot:Q54QE6
        Length = 512

 Score = 169 (64.5 bits), Expect = 3.8e-10, P = 3.8e-10
 Identities = 31/96 (32%), Positives = 50/96 (52%)

Query:   167 CDHLVASLSTDLAR-IPNPD---TPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQE 222
             C HL     T + + I + D   T C+ C     NW+C+ C  V CSR+VN H  +H++ 
Sbjct:     9 CIHLKDEYDTCINKSIFDKDLKITKCHACNDESENWICMTCGVVSCSRHVNGHAGEHFEN 68

Query:   223 TNHSVALGYSDLSVWCFACHAYLNAQAILQLQPVHE 258
             T H ++  +SD S WC+ C  Y++   +  +  + E
Sbjct:    69 TKHPISASFSDHSFWCYTCDTYVHNTPLFDICEILE 104

 Score = 158 (60.7 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 24/73 (32%), Positives = 38/73 (52%)

Query:    53 TPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYL 112
             T C+ C     NW+C+ C  V CSR+VN H   H+    H ++  +SD S WC+ C  Y+
Sbjct:    32 TKCHACNDESENWICMTCGVVSCSRHVNGHAGEHFENTKHPISASFSDHSFWCYTCDTYV 91

Query:   113 NAQAILQLRPVHE 125
             +   +  +  + E
Sbjct:    92 HNTPLFDICEILE 104

 Score = 40 (19.1 bits), Expect = 4.5e-09, Sum P(2) = 4.5e-09
 Identities = 8/35 (22%), Positives = 17/35 (48%)

Query:   187 PCNRCQHPRGNWL---CLCCKEVLCSRYVNKHMLQ 218
             P N+     G++    C+ CK+   + YV + + +
Sbjct:   353 PANKLVEAHGSFATSHCVSCKKEYSTEYVKERIFK 387


>RGD|1308216 [details] [associations]
            symbol:Usp44 "ubiquitin specific peptidase 44" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0051322 "anaphase"
            evidence=IEA] [GO:0060564 "negative regulation of mitotic
            anaphase-promoting complex activity" evidence=IEA] [GO:0090266
            "regulation of mitotic cell cycle spindle assembly checkpoint"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 RGD:1308216
            GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0090231 EMBL:CH473960 GO:GO:0051322
            GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
            OrthoDB:EOG4XGZZK IPI:IPI00870073 RefSeq:NP_001101553.1
            UniGene:Rn.64954 Ensembl:ENSRNOT00000007465 GeneID:314746
            KEGG:rno:314746 UCSC:RGD:1308216 NextBio:668165 Uniprot:D4A251
        Length = 481

 Score = 164 (62.8 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 28/84 (33%), Positives = 46/84 (54%)

Query:    55 CNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAY-LN 113
             C +C      W CL C  V C +Y+ +H L+H+ E +H VA + +D+ V+C+ C+ Y LN
Sbjct:    26 CMVCNTTESIWACLSCSHVACGQYIQEHALKHFEESSHPVAFEVNDMYVFCYLCNDYVLN 85

Query:   114 AQAILQLRPVHETSYVLKFGRALP 137
                   L+ +  T   +K G++ P
Sbjct:    86 DNTAGDLKSLRSTLSAIK-GKSYP 108

 Score = 160 (61.4 bits), Expect = 4.0e-09, P = 4.0e-09
 Identities = 33/106 (31%), Positives = 52/106 (49%)

Query:   167 CDHLVASLSTDLARIPNPDTP-CNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNH 225
             C H+          I NP    C  C      W CL C  V C +Y+ +H L+H++E++H
Sbjct:     4 CKHIEQLQLAQGHSILNPQKWFCMVCNTTESIWACLSCSHVACGQYIQEHALKHFEESSH 63

Query:   226 SVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLKFGRALP 270
              VA   +D+ V+C+ C+ Y LN      L+ +  T   +K G++ P
Sbjct:    64 PVAFEVNDMYVFCYLCNDYVLNDNTAGDLKSLRSTLSAIK-GKSYP 108


>UNIPROTKB|F8VRI7 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC018475 HGNC:HGNC:20064
            IPI:IPI01022768 ProteinModelPortal:F8VRI7 SMR:F8VRI7
            Ensembl:ENST00000552440 ArrayExpress:F8VRI7 Bgee:F8VRI7
            Uniprot:F8VRI7
        Length = 496

 Score = 163 (62.4 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 34/104 (32%), Positives = 54/104 (51%)

Query:   164 LTSCDHL-VASLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             + +C H+    L+ D + + NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     4 MDTCKHVGQLQLAQDHSSL-NPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E++H VAL  +++ V+C+ C  Y LN      L+ +  T   +K
Sbjct:    63 ESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106

 Score = 161 (61.7 bits), Expect = 3.2e-09, P = 3.2e-09
 Identities = 31/101 (30%), Positives = 51/101 (50%)

Query:    33 SCDHL-VASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKN 91
             +C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E +
Sbjct:     6 TCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESS 65

Query:    92 HSVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
             H VAL+ +++ V+C+ C  Y LN      L+ +  T   +K
Sbjct:    66 HPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106


>MGI|MGI:3045318 [details] [associations]
            symbol:Usp44 "ubiquitin specific peptidase 44" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0051301 "cell division" evidence=IEA] [GO:0051322 "anaphase"
            evidence=ISO] [GO:0060564 "negative regulation of mitotic
            anaphase-promoting complex activity" evidence=ISO] [GO:0090231
            "regulation of spindle checkpoint" evidence=ISO] [GO:0090266
            "regulation of mitotic cell cycle spindle assembly checkpoint"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS50271
            MGI:MGI:3045318 GO:GO:0005634 GO:GO:0043161 GO:GO:0051301
            GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0090266 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0051322 GO:GO:0060564 CTD:84101
            HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
            EMBL:AK088109 EMBL:CJ236846 EMBL:AC124686 EMBL:BC111886
            IPI:IPI00224757 RefSeq:NP_001193780.1 UniGene:Mm.276331
            ProteinModelPortal:Q8C2S0 SMR:Q8C2S0 STRING:Q8C2S0
            PhosphoSite:Q8C2S0 GeneID:327799 KEGG:mmu:327799 UCSC:uc011xlw.1
            eggNOG:KOG1867 InParanoid:Q8C2S0 NextBio:397964 Bgee:Q8C2S0
            Genevestigator:Q8C2S0 Uniprot:Q8C2S0
        Length = 711

 Score = 165 (63.1 bits), Expect = 1.9e-09, P = 1.9e-09
 Identities = 30/99 (30%), Positives = 52/99 (52%)

Query:    55 CNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAY-LN 113
             C +C      W CL C  V C +Y+ +H L+H++E +H VA + +D+  +C+ C+ Y LN
Sbjct:    26 CMVCNTTESIWACLSCSHVACGKYIQEHALKHFQESSHPVAFEVNDMYAFCYLCNDYVLN 85

Query:   114 AQAILQLRPVHETSYVLKFGR---ALPFNTGQHPKVKED 149
               A   L+ +  T   +K  +    +P ++  HP   +D
Sbjct:    86 DNAAGDLKSLRSTLSTIKSKKYPCVVPSDSVLHPVDAQD 124

 Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 27/78 (34%), Positives = 42/78 (53%)

Query:   188 CNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAY-LN 246
             C  C      W CL C  V C +Y+ +H L+H+QE++H VA   +D+  +C+ C+ Y LN
Sbjct:    26 CMVCNTTESIWACLSCSHVACGKYIQEHALKHFQESSHPVAFEVNDMYAFCYLCNDYVLN 85

Query:   247 AQAILQLQPVHETAYVLK 264
               A   L+ +  T   +K
Sbjct:    86 DNAAGDLKSLRSTLSTIK 103


>UNIPROTKB|I3LA47 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0090266 "regulation of mitotic cell
            cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
            "negative regulation of mitotic anaphase-promoting complex
            activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
            GeneTree:ENSGT00690000101718 KO:K11834 OMA:AIKSQNY EMBL:FP340372
            RefSeq:XP_003126758.2 Ensembl:ENSSSCT00000025589 GeneID:100516911
            KEGG:ssc:100516911 Uniprot:I3LA47
        Length = 709

 Score = 163 (62.4 bits), Expect = 3.3e-09, P = 3.3e-09
 Identities = 36/104 (34%), Positives = 54/104 (51%)

Query:   164 LTSCDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             +  C H+    L+ D + I NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     4 MDKCKHIGRLQLAHDHS-ILNPQKWHCVDCNTTESIWACLSCPHVACGRYIEEHALKHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E++H VAL  +++ V+C+ C  Y LN  A   L+ +  T   +K
Sbjct:    63 ESSHPVALEVNEMYVFCYFCDDYVLNDNATGDLKLLRSTLSAIK 106

 Score = 159 (61.0 bits), Expect = 9.7e-09, P = 9.7e-09
 Identities = 32/100 (32%), Positives = 51/100 (51%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E +H
Sbjct:     7 CKHIGRLQLAHDHSILNPQKWHCVDCNTTESIWACLSCPHVACGRYIEEHALKHFQESSH 66

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
              VAL+ +++ V+C+ C  Y LN  A   L+ +  T   +K
Sbjct:    67 PVALEVNEMYVFCYFCDDYVLNDNATGDLKLLRSTLSAIK 106


>UNIPROTKB|Q9H0E7 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
            division" evidence=IEA] [GO:0051322 "anaphase" evidence=IMP]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IMP]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0060564
            "negative regulation of mitotic anaphase-promoting complex
            activity" evidence=IMP] [GO:0090231 "regulation of spindle
            checkpoint" evidence=IMP] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=ISS]
            [GO:0090266 "regulation of mitotic cell cycle spindle assembly
            checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5077 GO:GO:0051322 GO:GO:0060564 CTD:84101
            HOGENOM:HOG000015084 KO:K11834 OMA:AIKSQNY HOVERGEN:HBG018027
            EMBL:AL136825 EMBL:AK315697 EMBL:AC018475 EMBL:BC030704
            IPI:IPI00030306 RefSeq:NP_001035862.1 RefSeq:NP_115523.2
            UniGene:Hs.646421 ProteinModelPortal:Q9H0E7 SMR:Q9H0E7
            IntAct:Q9H0E7 STRING:Q9H0E7 MEROPS:C19.057 PhosphoSite:Q9H0E7
            DMDM:300669621 PaxDb:Q9H0E7 PRIDE:Q9H0E7 DNASU:84101
            Ensembl:ENST00000258499 Ensembl:ENST00000393091
            Ensembl:ENST00000537435 GeneID:84101 KEGG:hsa:84101 UCSC:uc001teg.3
            GeneCards:GC12M095910 H-InvDB:HIX0010895 HGNC:HGNC:20064
            HPA:HPA026543 MIM:610993 neXtProt:NX_Q9H0E7 PharmGKB:PA134931457
            InParanoid:Q9H0E7 OrthoDB:EOG4XGZZK PhylomeDB:Q9H0E7
            GenomeRNAi:84101 NextBio:73349 ArrayExpress:Q9H0E7 Bgee:Q9H0E7
            CleanEx:HS_USP44 Genevestigator:Q9H0E7 GermOnline:ENSG00000136014
            Uniprot:Q9H0E7
        Length = 712

 Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 34/104 (32%), Positives = 54/104 (51%)

Query:   164 LTSCDHL-VASLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             + +C H+    L+ D + + NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     4 MDTCKHVGQLQLAQDHSSL-NPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E++H VAL  +++ V+C+ C  Y LN      L+ +  T   +K
Sbjct:    63 ESSHPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106

 Score = 161 (61.7 bits), Expect = 5.7e-09, P = 5.7e-09
 Identities = 31/101 (30%), Positives = 51/101 (50%)

Query:    33 SCDHL-VASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKN 91
             +C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E +
Sbjct:     6 TCKHVGQLQLAQDHSSLNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESS 65

Query:    92 HSVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
             H VAL+ +++ V+C+ C  Y LN      L+ +  T   +K
Sbjct:    66 HPVALEVNEMYVFCYLCDDYVLNDNTTGDLKLLRRTLSAIK 106


>UNIPROTKB|F1P4C5 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=IEA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0051322 "anaphase" evidence=IEA] [GO:0060564 "negative
            regulation of mitotic anaphase-promoting complex activity"
            evidence=IEA] [GO:0090266 "regulation of mitotic cell cycle spindle
            assembly checkpoint" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 GeneTree:ENSGT00690000101718 EMBL:AADN02005945
            IPI:IPI00600923 Ensembl:ENSGALT00000018595 Uniprot:F1P4C5
        Length = 717

 Score = 163 (62.4 bits), Expect = 3.4e-09, P = 3.4e-09
 Identities = 36/104 (34%), Positives = 52/104 (50%)

Query:   164 LTSCDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             +  C H+    L+ D + I NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     4 MDKCKHIGRLRLAQDHS-ILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALKHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E  H VAL  ++L V+C+ C  Y LN  A   ++ +  T   +K
Sbjct:    63 ENGHPVALEVNELYVFCYLCDDYVLNDNATGDIKLLRSTLSAIK 106

 Score = 160 (61.4 bits), Expect = 7.6e-09, P = 7.6e-09
 Identities = 32/100 (32%), Positives = 50/100 (50%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E  H
Sbjct:     7 CKHIGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALKHFQENGH 66

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
              VAL+ ++L V+C+ C  Y LN  A   ++ +  T   +K
Sbjct:    67 PVALEVNELYVFCYLCDDYVLNDNATGDIKLLRSTLSAIK 106


>UNIPROTKB|E1BLZ0 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0090266 "regulation of mitotic cell
            cycle spindle assembly checkpoint" evidence=IEA] [GO:0060564
            "negative regulation of mitotic anaphase-promoting complex
            activity" evidence=IEA] [GO:0051322 "anaphase" evidence=IEA]
            [GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0090231 GO:GO:0051322 GO:GO:0060564
            GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834 OMA:AIKSQNY
            EMBL:DAAA02012807 IPI:IPI00703062 RefSeq:NP_001192766.1
            UniGene:Bt.36835 PRIDE:E1BLZ0 Ensembl:ENSBTAT00000026571
            GeneID:517022 KEGG:bta:517022 NextBio:20872356 Uniprot:E1BLZ0
        Length = 709

 Score = 162 (62.1 bits), Expect = 4.3e-09, P = 4.3e-09
 Identities = 36/104 (34%), Positives = 52/104 (50%)

Query:   164 LTSCDHL-VASLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             +  C H+    L+ D   I NP    C  C      W CL C  V C RY+ +H L H+Q
Sbjct:     4 MDKCQHIGQLRLAQDHP-ILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALGHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E++H VAL  +++ V+C+ C  Y LN  A   L+ +  T   +K
Sbjct:    63 ESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRSTLSAIK 106

 Score = 157 (60.3 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 32/100 (32%), Positives = 49/100 (49%)

Query:    34 CDHL-VASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D   +      C  C      W CL C  V C RY+ +H L H++E +H
Sbjct:     7 CQHIGQLRLAQDHPILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALGHFQESSH 66

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
              VAL+ +++ V+C+ C  Y LN  A   L+ +  T   +K
Sbjct:    67 PVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRSTLSAIK 106


>UNIPROTKB|E2R0T7 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000101718 EMBL:AAEX03009951
            Ensembl:ENSCAFT00000010306 Uniprot:E2R0T7
        Length = 668

 Score = 161 (61.7 bits), Expect = 5.2e-09, P = 5.2e-09
 Identities = 35/104 (33%), Positives = 53/104 (50%)

Query:   164 LTSCDHL-VASLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             +  C H+    L+ D + I NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     4 MDKCKHIGQLQLAQDHS-ILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E++H VAL  +++ V+C+ C  Y LN  A   L+ +      +K
Sbjct:    63 ESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRNMLSAIK 106

 Score = 157 (60.3 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 30/90 (33%), Positives = 47/90 (52%)

Query:    34 CDHL-VASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E +H
Sbjct:     7 CKHIGQLQLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSH 66

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLR 121
              VAL+ +++ V+C+ C  Y LN  A   L+
Sbjct:    67 PVALEVNEMYVFCYLCDDYVLNDNATGDLK 96


>ZFIN|ZDB-GENE-040426-774 [details] [associations]
            symbol:usp44 "ubiquitin specific peptidase 44"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
            [GO:0051322 "anaphase" evidence=ISS] [GO:0090231 "regulation of
            spindle checkpoint" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0060564 "negative regulation of
            mitotic anaphase-promoting complex activity" evidence=ISS]
            [GO:0021551 "central nervous system morphogenesis" evidence=IMP]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0007067
            "mitosis" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0051301 "cell division"
            evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 ZFIN:ZDB-GENE-040426-774 GO:GO:0005634 GO:GO:0051301
            GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0021551 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 CTD:84101 HOGENOM:HOG000015084 KO:K11834
            EMBL:BC048060 IPI:IPI00512839 RefSeq:NP_956551.1 UniGene:Dr.78996
            ProteinModelPortal:Q7ZUM8 MEROPS:C19.073 PRIDE:Q7ZUM8 GeneID:393227
            KEGG:dre:393227 HOVERGEN:HBG018027 InParanoid:Q7ZUM8
            NextBio:20814291 ArrayExpress:Q7ZUM8 Uniprot:Q7ZUM8
        Length = 695

 Score = 161 (61.7 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 32/100 (32%), Positives = 52/100 (52%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E++H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALQHFKEQHH 63

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
              +AL+ ++L V+C+ C  Y LN  A   L+ +  T   +K
Sbjct:    64 PLALEVNELYVYCYLCDDYVLNDNATGDLKLLRSTLSAIK 103

 Score = 161 (61.7 bits), Expect = 5.5e-09, P = 5.5e-09
 Identities = 36/101 (35%), Positives = 52/101 (51%)

Query:   167 CDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETN 224
             C H+    L+ D + I NP    C  C      W CL C  V C RY+ +H LQH++E +
Sbjct:     4 CKHVGRLRLAQDHS-ILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALQHFKEQH 62

Query:   225 HSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             H +AL  ++L V+C+ C  Y LN  A   L+ +  T   +K
Sbjct:    63 HPLALEVNELYVYCYLCDDYVLNDNATGDLKLLRSTLSAIK 103


>UNIPROTKB|E2R0W7 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0090266 "regulation of
            mitotic cell cycle spindle assembly checkpoint" evidence=IEA]
            [GO:0060564 "negative regulation of mitotic anaphase-promoting
            complex activity" evidence=IEA] [GO:0051322 "anaphase"
            evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
            OMA:AIKSQNY EMBL:AAEX03009951 RefSeq:XP_532654.1
            ProteinModelPortal:E2R0W7 Ensembl:ENSCAFT00000010298 GeneID:475430
            KEGG:cfa:475430 NextBio:20851273 Uniprot:E2R0W7
        Length = 711

 Score = 161 (61.7 bits), Expect = 5.7e-09, P = 5.7e-09
 Identities = 35/104 (33%), Positives = 53/104 (50%)

Query:   164 LTSCDHL-VASLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             +  C H+    L+ D + I NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     4 MDKCKHIGQLQLAQDHS-ILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E++H VAL  +++ V+C+ C  Y LN  A   L+ +      +K
Sbjct:    63 ESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRNMLSAIK 106

 Score = 157 (60.3 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 30/90 (33%), Positives = 47/90 (52%)

Query:    34 CDHL-VASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E +H
Sbjct:     7 CKHIGQLQLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSH 66

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLR 121
              VAL+ +++ V+C+ C  Y LN  A   L+
Sbjct:    67 PVALEVNEMYVFCYLCDDYVLNDNATGDLK 96


>UNIPROTKB|D2HBJ8 [details] [associations]
            symbol:USP44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:9646 "Ailuropoda melanoleuca" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=ISS] [GO:0051322 "anaphase"
            evidence=ISS] [GO:0060564 "negative regulation of mitotic
            anaphase-promoting complex activity" evidence=ISS] [GO:0090231
            "regulation of spindle checkpoint" evidence=ISS] [GO:0090266
            "regulation of mitotic cell cycle spindle assembly checkpoint"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0043161 GO:GO:0051301 GO:GO:0007067
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0090266 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GO:GO:0051322 GO:GO:0060564 GeneTree:ENSGT00690000101718
            EMBL:GL192660 RefSeq:XP_002919284.1 Ensembl:ENSAMET00000002387
            GeneID:100470180 KEGG:aml:100470180 CTD:84101 HOGENOM:HOG000015084
            KO:K11834 OMA:AIKSQNY Uniprot:D2HBJ8
        Length = 711

 Score = 160 (61.4 bits), Expect = 7.5e-09, P = 7.5e-09
 Identities = 35/104 (33%), Positives = 53/104 (50%)

Query:   164 LTSCDHL-VASLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             +  C H+    L+ D + I NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     4 MDKCKHIGQLRLAQDHS-ILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQ 62

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             E++H VAL  +++ V+C+ C  Y LN  A   L+ +      +K
Sbjct:    63 ESSHPVALEVNEMYVFCYLCDDYVLNDNATGDLKLLRSMLSAIK 106

 Score = 156 (60.0 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 30/90 (33%), Positives = 47/90 (52%)

Query:    34 CDHL-VASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+ +H L+H++E +H
Sbjct:     7 CKHIGQLRLAQDHSILNPQKWHCVDCNTTESIWACLSCSHVACGRYIEEHALKHFQESSH 66

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLR 121
              VAL+ +++ V+C+ C  Y LN  A   L+
Sbjct:    67 PVALEVNEMYVFCYLCDDYVLNDNATGDLK 96


>UNIPROTKB|B4DV65 [details] [associations]
            symbol:USP3 "cDNA FLJ60902, highly similar to Ubiquitin
            carboxyl-terminal hydrolase 3 (EC 3.1.2.15)" species:9606 "Homo
            sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50271 GO:GO:0008270 GO:GO:0016787 Gene3D:3.30.40.10
            InterPro:IPR013083 EMBL:AC118274 EMBL:AC007950 UniGene:Hs.458499
            HGNC:HGNC:12626 ChiTaRS:USP3 EMBL:AK300948 IPI:IPI01009992
            SMR:B4DV65 STRING:B4DV65 Ensembl:ENST00000536001 Uniprot:B4DV65
        Length = 156

 Score = 134 (52.2 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 32/100 (32%), Positives = 50/100 (50%)

Query:    34 CDHLVAS--LSSDLARIP--TPDT-PCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYR 88
             C HL +S  ++ D A+ P  +P +  C++C+  +  W+CL C  V C RYVN H  +HY 
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:    89 ------------EKN----HSVALDYSDLSVWCFACHAYL 112
                         EK     H+V +D S  S +C+ C  ++
Sbjct:    63 DAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFV 102

 Score = 131 (51.2 bits), Expect = 2.9e-08, P = 2.9e-08
 Identities = 32/100 (32%), Positives = 50/100 (50%)

Query:   167 CDHLVAS--LSTDLARIPN--PDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             C HL +S  ++ D A+ PN  P +  C+ C+  +  W+CL C  V C RYVN H  +HY+
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:   222 E-----TNH-----------SVALGYSDLSVWCFACHAYL 245
             +     TNH           +V +  S  S +C+ C  ++
Sbjct:    63 DAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFV 102


>DICTYBASE|DDB_G0268872 [details] [associations]
            symbol:DDB_G0268872 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 dictyBase:DDB_G0268872 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 EMBL:AAFI02000004 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5560
            RefSeq:XP_647029.1 ProteinModelPortal:Q55EJ1
            EnsemblProtists:DDB0237744 GeneID:8616724 KEGG:ddi:DDB_G0268872
            Uniprot:Q55EJ1
        Length = 2125

 Score = 161 (61.7 bits), Expect = 2.2e-08, P = 2.2e-08
 Identities = 34/134 (25%), Positives = 64/134 (47%)

Query:   137 PFNTGQHPKVKEDDEMMLGAESGSVRHLTS--CDHLVASLSTDL-ARIPNPDT-PCNRCQ 192
             P    +  K+   D++++G E+G +   ++  C HL       +  ++ NP+   C  C 
Sbjct:   886 PLTPSKSSKLGHLDDLIIGVENGYINIYSTERCPHLTHLRYESINEKLSNPNEWKCTDCH 945

Query:   193 HPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYL-NAQAIL 251
             +    +LCL C ++ C  + +KH+  HY+ +NH +  G  D   +CF C  ++ N     
Sbjct:   946 YTHPLFLCLTCNKITCGTFKHKHVSAHYKSSNHPLVFGIKDKFCYCFICKKFVENDNDEG 1005

Query:   252 QLQPVHETAYVLKF 265
             +L+ +   AY   F
Sbjct:  1006 ELELLRGIAYESSF 1019

 Score = 154 (59.3 bits), Expect = 1.4e-07, P = 1.4e-07
 Identities = 40/143 (27%), Positives = 71/143 (49%)

Query:    17 DEMMIGGELGWVRHLAS--CDHLV-ASLSSDLARIPTPDT-PCNMCKHPRGNWLCLCCKE 72
             D+++IG E G++   ++  C HL      S   ++  P+   C  C +    +LCL C +
Sbjct:   899 DDLIIGVENGYINIYSTERCPHLTHLRYESINEKLSNPNEWKCTDCHYTHPLFLCLTCNK 958

Query:    73 VLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYL---NAQAILQL-RPV-HETS 127
             + C  + +KH+  HY+  NH +     D   +CF C  ++   N +  L+L R + +E+S
Sbjct:   959 ITCGTFKHKHVSAHYKSSNHPLVFGIKDKFCYCFICKKFVENDNDEGELELLRGIAYESS 1018

Query:   128 YVLKFGRALPFNTGQHPKVKEDD 150
             +     R   FNT +  K+ +DD
Sbjct:  1019 FNFLKSR---FNTEE--KITQDD 1036


>UNIPROTKB|Q0V9G5 [details] [associations]
            symbol:usp44 "Ubiquitin carboxyl-terminal hydrolase 44"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0051322 "anaphase" evidence=ISS] [GO:0060564
            "negative regulation of mitotic anaphase-promoting complex
            activity" evidence=ISS] [GO:0090231 "regulation of spindle
            checkpoint" evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0046872
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 GO:GO:0090231
            eggNOG:COG5533 GO:GO:0051322 GO:GO:0060564 CTD:84101
            HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 EMBL:BC121579
            RefSeq:NP_001072389.1 UniGene:Str.5094 ProteinModelPortal:Q0V9G5
            GeneID:779843 KEGG:xtr:779843 Xenbase:XB-GENE-1014112
            Uniprot:Q0V9G5
        Length = 652

 Score = 155 (59.6 bits), Expect = 2.5e-08, P = 2.5e-08
 Identities = 34/104 (32%), Positives = 52/104 (50%)

Query:   164 LTSCDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             +  C H+    L+ D + I NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     1 MDKCKHVGRLRLAQDHS-ILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQ 59

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             ++ H +AL  ++L V+C+ C  Y LN      L+ +  T   +K
Sbjct:    60 DSKHPLALEVNELYVFCYLCDDYVLNDNTTGDLKLLRSTLSAIK 103

 Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 31/100 (31%), Positives = 49/100 (49%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+ +H LRH+++  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQDSKH 63

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
              +AL+ ++L V+C+ C  Y LN      L+ +  T   +K
Sbjct:    64 PLALEVNELYVFCYLCDDYVLNDNTTGDLKLLRSTLSAIK 103


>DICTYBASE|DDB_G0270200 [details] [associations]
            symbol:DDB_G0270200 "BRCA1-associated protein"
            species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148
            Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184
            SMART:SM00290 dictyBase:DDB_G0270200 EMBL:AAFI02000005
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            eggNOG:NOG272422 KO:K10632 InterPro:IPR011422 Pfam:PF07576
            ProDom:PD017029 OMA:CLDRLDS RefSeq:XP_646613.1
            ProteinModelPortal:Q55C68 EnsemblProtists:DDB0190874 GeneID:8617585
            KEGG:ddi:DDB_G0270200 InParanoid:Q55C68 ProtClustDB:CLSZ2497295
            Uniprot:Q55C68
        Length = 687

 Score = 155 (59.6 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 27/59 (45%), Positives = 35/59 (59%)

Query:   188 CNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLN 246
             C+ CQ     W+C+ C +V CSRYVN H  QHYQET H+ AL      VW +A   Y++
Sbjct:   441 CSTCQSTESLWICIICGQVGCSRYVNSHANQHYQETMHTFALELETQRVWDYAGDGYVH 499

 Score = 141 (54.7 bits), Expect = 1.1e-06, P = 1.1e-06
 Identities = 23/59 (38%), Positives = 35/59 (59%)

Query:    55 CNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLN 113
             C+ C+     W+C+ C +V CSRYVN H  +HY+E  H+ AL+     VW +A   Y++
Sbjct:   441 CSTCQSTESLWICIICGQVGCSRYVNSHANQHYQETMHTFALELETQRVWDYAGDGYVH 499


>UNIPROTKB|Q5XGZ2 [details] [associations]
            symbol:usp44-b "Ubiquitin carboxyl-terminal hydrolase 44-B"
            species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
            "anaphase" evidence=ISS] [GO:0060564 "negative regulation of
            mitotic anaphase-promoting complex activity" evidence=ISS]
            [GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
            GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC084285
            RefSeq:NP_001088277.1 UniGene:Xl.49566 ProteinModelPortal:Q5XGZ2
            GeneID:495110 KEGG:xla:495110 CTD:495110 Xenbase:XB-GENE-6254317
            Uniprot:Q5XGZ2
        Length = 690

 Score = 155 (59.6 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 34/104 (32%), Positives = 52/104 (50%)

Query:   164 LTSCDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             +  C H+    L+ D + I NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     1 MDKCKHVGRLRLAQDHS-ILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQ 59

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             ++ H +AL  ++L V+C+ C  Y LN      L+ +  T   +K
Sbjct:    60 DSKHPLALEVNELYVFCYLCDDYVLNDNTTGDLKLLRSTLSAIK 103

 Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 31/100 (31%), Positives = 49/100 (49%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+ +H LRH+++  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQDSKH 63

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
              +AL+ ++L V+C+ C  Y LN      L+ +  T   +K
Sbjct:    64 PLALEVNELYVFCYLCDDYVLNDNTTGDLKLLRSTLSAIK 103


>UNIPROTKB|Q6NTR6 [details] [associations]
            symbol:usp44-a "Ubiquitin carboxyl-terminal hydrolase 44-A"
            species:8355 "Xenopus laevis" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0051322
            "anaphase" evidence=ISS] [GO:0060564 "negative regulation of
            mitotic anaphase-promoting complex activity" evidence=ISS]
            [GO:0090231 "regulation of spindle checkpoint" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
            GO:GO:0051301 GO:GO:0007067 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0090231 GO:GO:0051322
            GO:GO:0060564 KO:K11834 HOVERGEN:HBG018027 EMBL:BC068889
            RefSeq:NP_001084641.1 UniGene:Xl.6668 ProteinModelPortal:Q6NTR6
            GeneID:414600 KEGG:xla:414600 CTD:414600 Xenbase:XB-GENE-1014118
            Uniprot:Q6NTR6
        Length = 690

 Score = 155 (59.6 bits), Expect = 2.7e-08, P = 2.7e-08
 Identities = 34/104 (32%), Positives = 52/104 (50%)

Query:   164 LTSCDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             +  C H+    L+ D + I NP    C  C      W CL C  V C RY+ +H L+H+Q
Sbjct:     1 MDKCKHVGRLRLAQDHS-ILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQ 59

Query:   222 ETNHSVALGYSDLSVWCFACHAY-LNAQAILQLQPVHETAYVLK 264
             ++ H +AL  ++L V+C+ C  Y LN      L+ +  T   +K
Sbjct:    60 DSKHPLALEVNELYVFCYLCDDYVLNDNTTGDLKLLRSTLSAIK 103

 Score = 154 (59.3 bits), Expect = 3.6e-08, P = 3.6e-08
 Identities = 31/100 (31%), Positives = 49/100 (49%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+ +H LRH+++  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWHCVDCNTTESVWACLSCSHVACGRYIEEHALRHFQDSKH 63

Query:    93 SVALDYSDLSVWCFACHAY-LNAQAILQLRPVHETSYVLK 131
              +AL+ ++L V+C+ C  Y LN      L+ +  T   +K
Sbjct:    64 PLALEVNELYVFCYLCDDYVLNDNTTGDLKLLRSTLSAIK 103


>ZFIN|ZDB-GENE-050208-484 [details] [associations]
            symbol:usp49 "ubiquitin specific peptidase 49"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            ZFIN:ZDB-GENE-050208-484 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5077 EMBL:AL645789 GeneTree:ENSGT00690000101718
            HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
            CTD:25862 OMA:VRGQKQD EMBL:BC171546 EMBL:BC171548 IPI:IPI00503837
            RefSeq:NP_001038361.1 UniGene:Dr.13979 Ensembl:ENSDART00000037069
            GeneID:559473 KEGG:dre:559473 InParanoid:Q1MTK1 NextBio:20882985
            Uniprot:Q1MTK1
        Length = 649

 Score = 154 (59.3 bits), Expect = 3.3e-08, P = 3.3e-08
 Identities = 33/91 (36%), Positives = 44/91 (48%)

Query:   167 CDHLVASLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNH 225
             C H+V         I NP    C  C      W CL C  V C RY+ +H   HYQ+T H
Sbjct:     4 CKHVVRFRLGHGHSILNPQMWRCVDCDTTESVWACLKCTHVACGRYMEEHSRSHYQQTQH 63

Query:   226 SVALGYSDLSVWCFACHAYL---NAQAILQL 253
              +A+   +L V+CFAC  Y+   N +  L+L
Sbjct:    64 PLAMDVRELDVFCFACGDYVLNDNVEGDLKL 94

 Score = 144 (55.7 bits), Expect = 4.6e-07, P = 4.6e-07
 Identities = 31/91 (34%), Positives = 43/91 (47%)

Query:    34 CDHLVASLSSDLARIPTPDT-PCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+V         I  P    C  C      W CL C  V C RY+ +H   HY++  H
Sbjct:     4 CKHVVRFRLGHGHSILNPQMWRCVDCDTTESVWACLKCTHVACGRYMEEHSRSHYQQTQH 63

Query:    93 SVALDYSDLSVWCFACHAYL---NAQAILQL 120
              +A+D  +L V+CFAC  Y+   N +  L+L
Sbjct:    64 PLAMDVRELDVFCFACGDYVLNDNVEGDLKL 94


>UNIPROTKB|I3LRM6 [details] [associations]
            symbol:I3LRM6 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:VRGQKQD EMBL:CU468691
            Ensembl:ENSSSCT00000023974 Uniprot:I3LRM6
        Length = 628

 Score = 153 (58.9 bits), Expect = 4.0e-08, P = 4.0e-08
 Identities = 31/81 (38%), Positives = 43/81 (53%)

Query:   167 CDHLVA-SLSTDLARIPNPDTPCNR-CQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETN 224
             C H+    L+ D + I NP   C R C      W CL C  V C RY+  H L+H++ET 
Sbjct:     4 CKHVGRLRLAQDHS-ILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETG 62

Query:   225 HSVALGYSDLSVWCFACHAYL 245
             H +A+   DL V+C+ C  Y+
Sbjct:    63 HPLAMEVRDLYVFCYLCKDYV 83

 Score = 145 (56.1 bits), Expect = 3.4e-07, P = 3.4e-07
 Identities = 26/80 (32%), Positives = 39/80 (48%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+  H L+H+ E  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63

Query:    93 SVALDYSDLSVWCFACHAYL 112
              +A++  DL V+C+ C  Y+
Sbjct:    64 PLAMEVRDLYVFCYLCKDYV 83


>UNIPROTKB|E2RP15 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 OMA:VRGQKQD
            EMBL:AAEX03008323 RefSeq:XP_532134.3 Ensembl:ENSCAFT00000002525
            GeneID:474899 KEGG:cfa:474899 NextBio:20850836 Uniprot:E2RP15
        Length = 681

 Score = 153 (58.9 bits), Expect = 4.5e-08, P = 4.5e-08
 Identities = 31/81 (38%), Positives = 43/81 (53%)

Query:   167 CDHLVA-SLSTDLARIPNPDTPCNR-CQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETN 224
             C H+    L+ D + I NP   C R C      W CL C  V C RY+  H L+H++ET 
Sbjct:     4 CKHVGRLRLAQDHS-ILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETG 62

Query:   225 HSVALGYSDLSVWCFACHAYL 245
             H +A+   DL V+C+ C  Y+
Sbjct:    63 HPLAMEVRDLYVFCYLCKDYV 83

 Score = 145 (56.1 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 26/80 (32%), Positives = 39/80 (48%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+  H L+H+ E  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63

Query:    93 SVALDYSDLSVWCFACHAYL 112
              +A++  DL V+C+ C  Y+
Sbjct:    64 PLAMEVRDLYVFCYLCKDYV 83


>UNIPROTKB|F1RUW2 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862 EMBL:CU914409
            RefSeq:XP_003128438.3 Ensembl:ENSSSCT00000001812 GeneID:100520499
            KEGG:ssc:100520499 OMA:INCKISE Uniprot:F1RUW2
        Length = 682

 Score = 153 (58.9 bits), Expect = 4.6e-08, P = 4.6e-08
 Identities = 31/81 (38%), Positives = 43/81 (53%)

Query:   167 CDHLVA-SLSTDLARIPNPDTPCNR-CQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETN 224
             C H+    L+ D + I NP   C R C      W CL C  V C RY+  H L+H++ET 
Sbjct:     4 CKHVGRLRLAQDHS-ILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETG 62

Query:   225 HSVALGYSDLSVWCFACHAYL 245
             H +A+   DL V+C+ C  Y+
Sbjct:    63 HPLAMEVRDLYVFCYLCKDYV 83

 Score = 145 (56.1 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 26/80 (32%), Positives = 39/80 (48%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+  H L+H+ E  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWCCRECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63

Query:    93 SVALDYSDLSVWCFACHAYL 112
              +A++  DL V+C+ C  Y+
Sbjct:    64 PLAMEVRDLYVFCYLCKDYV 83


>UNIPROTKB|E1BGQ9 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834 CTD:25862
            OMA:VRGQKQD EMBL:DAAA02055061 IPI:IPI00716640 RefSeq:XP_002697284.1
            RefSeq:XP_595518.4 ProteinModelPortal:E1BGQ9
            Ensembl:ENSBTAT00000011820 GeneID:517349 KEGG:bta:517349
            NextBio:20872416 Uniprot:E1BGQ9
        Length = 683

 Score = 152 (58.6 bits), Expect = 5.9e-08, P = 5.9e-08
 Identities = 30/81 (37%), Positives = 42/81 (51%)

Query:   167 CDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETN 224
             C H+    L+ D + I NP    C  C      W CL C  V C RY+  H L+H++ET 
Sbjct:     4 CKHVGRLRLAQDHS-ILNPQKWYCRECATTESVWACLKCSHVACGRYIEDHALKHFEETR 62

Query:   225 HSVALGYSDLSVWCFACHAYL 245
             H +A+   DL V+C+ C  Y+
Sbjct:    63 HPLAMEVRDLYVFCYLCKDYV 83

 Score = 145 (56.1 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 26/80 (32%), Positives = 39/80 (48%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+  H L+H+ E  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWYCRECATTESVWACLKCSHVACGRYIEDHALKHFEETRH 63

Query:    93 SVALDYSDLSVWCFACHAYL 112
              +A++  DL V+C+ C  Y+
Sbjct:    64 PLAMEVRDLYVFCYLCKDYV 83


>UNIPROTKB|I3LCU7 [details] [associations]
            symbol:I3LCU7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:CU914208
            Ensembl:ENSSSCT00000028774 Uniprot:I3LCU7
        Length = 95

 Score = 128 (50.1 bits), Expect = 6.3e-08, P = 6.3e-08
 Identities = 30/89 (33%), Positives = 44/89 (49%)

Query:   167 CDHLVAS--LSTDLARIPN--PDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             C HL +S  ++ D A+ PN  P +  C+ C+  +  W+CL C  V C RYVN H  +HY+
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:   222 E-----TNHSVALGYSDLS-VWCFACHAY 244
             +     TNH  +          C  C +Y
Sbjct:    63 DAQIPLTNHKKSEKQEKAQHTVCMDCSSY 91

 Score = 124 (48.7 bits), Expect = 1.8e-07, P = 1.8e-07
 Identities = 30/90 (33%), Positives = 47/90 (52%)

Query:    34 CDHLVAS--LSSDLARIP--TPDT-PCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYR 88
             C HL +S  ++ D A+ P  +P +  C++C+  +  W+CL C  V C RYVN H  +HY 
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:    89 EK-----NH--SVALDYSDLSVWCFACHAY 111
             +      NH  S   + +  +V C  C +Y
Sbjct:    63 DAQIPLTNHKKSEKQEKAQHTV-CMDCSSY 91


>MGI|MGI:2685391 [details] [associations]
            symbol:Usp49 "ubiquitin specific peptidase 49" species:10090
            "Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008150 "biological_process" evidence=ND] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 MGI:MGI:2685391 GO:GO:0005634 GO:GO:0005737
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 UniGene:Mm.59393
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000015084 KO:K11834
            MEROPS:C19.073 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK CTD:25862
            OMA:VRGQKQD EMBL:BC060712 IPI:IPI00420459 RefSeq:NP_940813.1
            ProteinModelPortal:Q6P9L4 SMR:Q6P9L4 STRING:Q6P9L4
            PhosphoSite:Q6P9L4 PRIDE:Q6P9L4 Ensembl:ENSMUST00000024779
            GeneID:224836 KEGG:mmu:224836 UCSC:uc008cvv.1 InParanoid:Q6P9L4
            NextBio:377415 Bgee:Q6P9L4 CleanEx:MM_USP49 Genevestigator:Q6P9L4
            GermOnline:ENSMUSG00000023984 Uniprot:Q6P9L4
        Length = 685

 Score = 151 (58.2 bits), Expect = 7.8e-08, P = 7.8e-08
 Identities = 30/81 (37%), Positives = 43/81 (53%)

Query:   167 CDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETN 224
             C H+    L+ D + I NP    C +C      W CL C  V C RY+  H L+H++ET 
Sbjct:     4 CKHVGRLRLAQDHS-ILNPQKWCCLQCATTESAWACLKCSHVACGRYIEDHALKHFEETG 62

Query:   225 HSVALGYSDLSVWCFACHAYL 245
             H +A+   DL V+C+ C  Y+
Sbjct:    63 HPLAMEVRDLYVFCYLCKDYV 83

 Score = 145 (56.1 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 26/80 (32%), Positives = 39/80 (48%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+  H L+H+ E  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWCCLQCATTESAWACLKCSHVACGRYIEDHALKHFEETGH 63

Query:    93 SVALDYSDLSVWCFACHAYL 112
              +A++  DL V+C+ C  Y+
Sbjct:    64 PLAMEVRDLYVFCYLCKDYV 83


>RGD|1310513 [details] [associations]
            symbol:Usp49 "ubiquitin specific peptidase 49" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737
            "cytoplasm" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            RGD:1310513 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11834
            OrthoDB:EOG4XGZZK CTD:25862 OMA:VRGQKQD EMBL:AC129162
            IPI:IPI00371730 RefSeq:NP_001129942.1 UniGene:Rn.147913
            Ensembl:ENSRNOT00000018550 GeneID:316211 KEGG:rno:316211
            UCSC:RGD:1310513 NextBio:670532 Uniprot:D3ZJ49
        Length = 685

 Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
 Identities = 30/81 (37%), Positives = 42/81 (51%)

Query:   167 CDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETN 224
             C H+    L+ D + I NP    C  C      W CL C  V C RY+  H L+H++ET 
Sbjct:     4 CKHVGRLRLAQDHS-ILNPQKWCCLECATTESAWACLKCSHVACGRYIEDHALKHFEETG 62

Query:   225 HSVALGYSDLSVWCFACHAYL 245
             H +A+   DL V+C+ C  Y+
Sbjct:    63 HPLAMEVRDLYVFCYLCKDYV 83

 Score = 143 (55.4 bits), Expect = 6.5e-07, P = 6.5e-07
 Identities = 26/80 (32%), Positives = 39/80 (48%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+  H L+H+ E  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWCCLECATTESAWACLKCSHVACGRYIEDHALKHFEETGH 63

Query:    93 SVALDYSDLSVWCFACHAYL 112
              +A++  DL V+C+ C  Y+
Sbjct:    64 PLAMEVRDLYVFCYLCKDYV 83


>UNIPROTKB|Q5T3E1 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 GO:GO:0005634
            GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AL160163 EMBL:AL365205 HOGENOM:HOG000015084 HOVERGEN:HBG018027
            UniGene:Hs.665742 HGNC:HGNC:20078 IPI:IPI00639902 SMR:Q5T3E1
            STRING:Q5T3E1 Ensembl:ENST00000373010 Uniprot:Q5T3E1
        Length = 585

 Score = 149 (57.5 bits), Expect = 1.1e-07, P = 1.1e-07
 Identities = 30/81 (37%), Positives = 42/81 (51%)

Query:   167 CDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETN 224
             C H+    L+ D + I NP    C  C      W CL C  V C RY+  H L+H++ET 
Sbjct:     4 CKHVGRLRLAQDHS-ILNPQKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEETG 62

Query:   225 HSVALGYSDLSVWCFACHAYL 245
             H +A+   DL V+C+ C  Y+
Sbjct:    63 HPLAMEVRDLYVFCYLCKDYV 83

 Score = 142 (55.0 bits), Expect = 6.7e-07, P = 6.7e-07
 Identities = 26/80 (32%), Positives = 39/80 (48%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+  H L+H+ E  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63

Query:    93 SVALDYSDLSVWCFACHAYL 112
              +A++  DL V+C+ C  Y+
Sbjct:    64 PLAMEVRDLYVFCYLCKDYV 83


>UNIPROTKB|Q70CQ1 [details] [associations]
            symbol:USP49 "Ubiquitin carboxyl-terminal hydrolase 49"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290
            GO:GO:0005634 GO:GO:0005737 EMBL:CH471081 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 eggNOG:COG5077 EMBL:AL365205
            HOGENOM:HOG000015084 KO:K11834 MEROPS:C19.073 HOVERGEN:HBG018027
            OrthoDB:EOG4XGZZK EMBL:AJ586139 EMBL:BC014176 IPI:IPI00156871
            IPI:IPI00455818 RefSeq:NP_061031.2 UniGene:Hs.665742
            ProteinModelPortal:Q70CQ1 SMR:Q70CQ1 IntAct:Q70CQ1 STRING:Q70CQ1
            PhosphoSite:Q70CQ1 DMDM:52000871 PaxDb:Q70CQ1 PRIDE:Q70CQ1
            DNASU:25862 Ensembl:ENST00000297229 Ensembl:ENST00000373006
            Ensembl:ENST00000373009 Ensembl:ENST00000394253 GeneID:25862
            KEGG:hsa:25862 UCSC:uc003ori.3 CTD:25862 GeneCards:GC06M041762
            H-InvDB:HIX0164985 HGNC:HGNC:20078 HPA:HPA030254 HPA:HPA030255
            neXtProt:NX_Q70CQ1 PharmGKB:PA134954570 InParanoid:Q70CQ1
            OMA:VRGQKQD GenomeRNAi:25862 NextBio:47231 ArrayExpress:Q70CQ1
            Bgee:Q70CQ1 CleanEx:HS_USP49 Genevestigator:Q70CQ1
            GermOnline:ENSG00000164663 Uniprot:Q70CQ1
        Length = 688

 Score = 149 (57.5 bits), Expect = 1.3e-07, P = 1.3e-07
 Identities = 30/81 (37%), Positives = 42/81 (51%)

Query:   167 CDHLVA-SLSTDLARIPNPDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETN 224
             C H+    L+ D + I NP    C  C      W CL C  V C RY+  H L+H++ET 
Sbjct:     4 CKHVGRLRLAQDHS-ILNPQKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEETG 62

Query:   225 HSVALGYSDLSVWCFACHAYL 245
             H +A+   DL V+C+ C  Y+
Sbjct:    63 HPLAMEVRDLYVFCYLCKDYV 83

 Score = 142 (55.0 bits), Expect = 8.4e-07, P = 8.4e-07
 Identities = 26/80 (32%), Positives = 39/80 (48%)

Query:    34 CDHLVA-SLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H+    L+ D + +      C  C      W CL C  V C RY+  H L+H+ E  H
Sbjct:     4 CKHVGRLRLAQDHSILNPQKWCCLECATTESVWACLKCSHVACGRYIEDHALKHFEETGH 63

Query:    93 SVALDYSDLSVWCFACHAYL 112
              +A++  DL V+C+ C  Y+
Sbjct:    64 PLAMEVRDLYVFCYLCKDYV 83


>UNIPROTKB|I3L5N8 [details] [associations]
            symbol:BRAP "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639
            PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            GeneTree:ENSGT00500000044909 Ensembl:ENSSSCT00000027806 OMA:GVENDEK
            Uniprot:I3L5N8
        Length = 185

 Score = 130 (50.8 bits), Expect = 3.0e-07, P = 3.0e-07
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:    56 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 115

Query:   242 HAYLN 246
               Y++
Sbjct:   116 DNYVH 120

 Score = 126 (49.4 bits), Expect = 1.5e-06, P = 1.5e-06
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:    56 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 115

Query:   109 HAYLN 113
               Y++
Sbjct:   116 DNYVH 120


>RGD|1308852 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10116
            "Rattus norvegicus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0006281 "DNA
            repair" evidence=ISO] [GO:0016578 "histone deubiquitination"
            evidence=ISO] [GO:0031647 "regulation of protein stability"
            evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 RGD:1308852 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 MEROPS:C19.026 CTD:9960
            HOVERGEN:HBG103589 KO:K11986 IPI:IPI00366664 EMBL:DQ076481
            RefSeq:NP_001020595.1 UniGene:Rn.164920 ProteinModelPortal:Q4JL29
            GeneID:363084 KEGG:rno:363084 UCSC:RGD:1308852 NextBio:682386
            Genevestigator:Q4JL29 Uniprot:Q4JL29
        Length = 520

 Score = 142 (55.0 bits), Expect = 5.6e-07, P = 5.6e-07
 Identities = 33/100 (33%), Positives = 52/100 (52%)

Query:    34 CDHLVAS--LSSDLARIP--TPDT-PCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY- 87
             C HL +S  ++ D A+ P  +P +  C++C+  +  W+CL C  VLC RYVN H  +HY 
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVLCGRYVNGHAKKHYE 62

Query:    88 --------------REK-NHSVALDYSDLSVWCFACHAYL 112
                           +EK  H+V +D S  S +C+ C  ++
Sbjct:    63 DAQIPLLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 102

 Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 31/100 (31%), Positives = 49/100 (49%)

Query:   167 CDHLVAS--LSTDLARIPN--PDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             C HL +S  ++ D A+ PN  P +  C+ C+  +  W+CL C  VLC RYVN H  +HY+
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVLCGRYVNGHAKKHYE 62

Query:   222 ETN----------------HSVALGYSDLSVWCFACHAYL 245
             +                  H+V +  S  S +C+ C  ++
Sbjct:    63 DAQIPLLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 102


>MGI|MGI:2152450 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10090
            "Mus musculus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016578 "histone deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031647 "regulation of
            protein stability" evidence=ISO] [GO:0042393 "histone binding"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2152450 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5560
            HOGENOM:HOG000231498 GeneTree:ENSGT00690000102047 MEROPS:C19.026
            CTD:9960 HOVERGEN:HBG103589 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            EMBL:AK031141 EMBL:BC017156 IPI:IPI00127231 RefSeq:NP_659186.1
            UniGene:Mm.38976 ProteinModelPortal:Q91W36 SMR:Q91W36
            PhosphoSite:Q91W36 PaxDb:Q91W36 PRIDE:Q91W36
            Ensembl:ENSMUST00000127569 GeneID:235441 KEGG:mmu:235441
            UCSC:uc009qey.1 InParanoid:Q91W36 NextBio:382674 Bgee:Q91W36
            CleanEx:MM_USP3 Genevestigator:Q91W36 GermOnline:ENSMUSG00000032376
            Uniprot:Q91W36
        Length = 520

 Score = 135 (52.6 bits), Expect = 3.5e-06, P = 3.5e-06
 Identities = 32/100 (32%), Positives = 51/100 (51%)

Query:    34 CDHLVAS--LSSDLARIP--TPDT-PCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY- 87
             C HL +S  ++ D A+ P  +P +  C++C+  +  W+CL C  V C RYVN H  +HY 
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:    88 --------------REK-NHSVALDYSDLSVWCFACHAYL 112
                           +EK  H+V +D S  S +C+ C  ++
Sbjct:    63 DAQIPLLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 102

 Score = 127 (49.8 bits), Expect = 2.8e-05, P = 2.8e-05
 Identities = 30/100 (30%), Positives = 48/100 (48%)

Query:   167 CDHLVAS--LSTDLARIPN--PDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             C HL +S  ++ D A+ PN  P +  C+ C+  +  W+CL C  V C RYVN H  +HY+
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:   222 ETN----------------HSVALGYSDLSVWCFACHAYL 245
             +                  H+V +  S  S +C+ C  ++
Sbjct:    63 DAQIPLLNHKRSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 102


>UNIPROTKB|E2QZQ0 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 CTD:9960 KO:K11986 OMA:DCLRSFT
            EMBL:AAEX03016202 EMBL:AAEX03016201 RefSeq:XP_544715.3
            Ensembl:ENSCAFT00000026918 GeneID:487590 KEGG:cfa:487590
            NextBio:20861160 Uniprot:E2QZQ0
        Length = 520

 Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 32/100 (32%), Positives = 50/100 (50%)

Query:    34 CDHLVAS--LSSDLARIP--TPDT-PCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYR 88
             C HL +S  ++ D A+ P  +P +  C++C+  +  W+CL C  V C RYVN H  +HY 
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:    89 ------------EKN----HSVALDYSDLSVWCFACHAYL 112
                         EK     H+V +D S  S +C+ C  ++
Sbjct:    63 DAQVPLTNHKKSEKQDKPQHTVCMDCSSYSTYCYRCDDFV 102

 Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 32/100 (32%), Positives = 50/100 (50%)

Query:   167 CDHLVAS--LSTDLARIPN--PDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             C HL +S  ++ D A+ PN  P +  C+ C+  +  W+CL C  V C RYVN H  +HY+
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:   222 E-----TNH-----------SVALGYSDLSVWCFACHAYL 245
             +     TNH           +V +  S  S +C+ C  ++
Sbjct:    63 DAQVPLTNHKKSEKQDKPQHTVCMDCSSYSTYCYRCDDFV 102


>UNIPROTKB|Q9Y6I4 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0042393 "histone binding" evidence=IPI]
            [GO:0016578 "histone deubiquitination" evidence=IDA] [GO:0031647
            "regulation of protein stability" evidence=IDA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IMP] [GO:0000790
            "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic cell cycle"
            evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0004843
            "ubiquitin-specific protease activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0031647 GO:GO:0000790 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 EMBL:CH471082 GO:GO:0016578
            GO:GO:0004843 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5533
            EMBL:AC118274 HOGENOM:HOG000231498 EMBL:AF073344 EMBL:BT007269
            EMBL:AK301236 EMBL:AC007950 EMBL:BC018113 EMBL:BC065300
            EMBL:BC107137 EMBL:BC107138 IPI:IPI00002330 IPI:IPI01008797
            RefSeq:NP_001243631.1 RefSeq:NP_006528.2 UniGene:Hs.458499
            ProteinModelPortal:Q9Y6I4 SMR:Q9Y6I4 IntAct:Q9Y6I4 STRING:Q9Y6I4
            MEROPS:C19.026 PhosphoSite:Q9Y6I4 PaxDb:Q9Y6I4 PRIDE:Q9Y6I4
            DNASU:9960 Ensembl:ENST00000380324 Ensembl:ENST00000540797
            GeneID:9960 KEGG:hsa:9960 UCSC:uc002amf.3 CTD:9960
            GeneCards:GC15P063796 H-InvDB:HIX0012328 HGNC:HGNC:12626 MIM:604728
            neXtProt:NX_Q9Y6I4 PharmGKB:PA37251 HOVERGEN:HBG103589
            InParanoid:Q9Y6I4 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            ChiTaRS:USP3 GenomeRNAi:9960 NextBio:37582 ArrayExpress:Q9Y6I4
            Bgee:Q9Y6I4 CleanEx:HS_USP3 Genevestigator:Q9Y6I4
            GermOnline:ENSG00000140455 Uniprot:Q9Y6I4
        Length = 520

 Score = 134 (52.2 bits), Expect = 4.6e-06, P = 4.6e-06
 Identities = 32/100 (32%), Positives = 50/100 (50%)

Query:    34 CDHLVAS--LSSDLARIP--TPDT-PCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYR 88
             C HL +S  ++ D A+ P  +P +  C++C+  +  W+CL C  V C RYVN H  +HY 
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:    89 ------------EKN----HSVALDYSDLSVWCFACHAYL 112
                         EK     H+V +D S  S +C+ C  ++
Sbjct:    63 DAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFV 102

 Score = 131 (51.2 bits), Expect = 1.0e-05, P = 1.0e-05
 Identities = 32/100 (32%), Positives = 50/100 (50%)

Query:   167 CDHLVAS--LSTDLARIPN--PDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             C HL +S  ++ D A+ PN  P +  C+ C+  +  W+CL C  V C RYVN H  +HY+
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYE 62

Query:   222 E-----TNH-----------SVALGYSDLSVWCFACHAYL 245
             +     TNH           +V +  S  S +C+ C  ++
Sbjct:    63 DAQVPLTNHKKSEKQDKVQHTVCMDCSSYSTYCYRCDDFV 102


>UNIPROTKB|H0YMP6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC118274
            EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3 Ensembl:ENST00000561442
            Bgee:H0YMP6 Uniprot:H0YMP6
        Length = 132

 Score = 111 (44.1 bits), Expect = 4.9e-06, P = 4.9e-06
 Identities = 26/83 (31%), Positives = 37/83 (44%)

Query:    42 SSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYR------------E 89
             SS+L    +      +C+  +  W+CL C  V C RYVN H  +HY             E
Sbjct:    47 SSNLPASASQSVGTTVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSE 106

Query:    90 KN----HSVALDYSDLSVWCFAC 108
             K     H+V +D S  S +C+ C
Sbjct:   107 KQDKVQHTVCMDCSSYSTYCYRC 129

 Score = 101 (40.6 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 22/67 (32%), Positives = 32/67 (47%)

Query:   191 CQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQE-----TNH-----------SVALGYSDL 234
             C+  +  W+CL C  V C RYVN H  +HY++     TNH           +V +  S  
Sbjct:    63 CRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCSSY 122

Query:   235 SVWCFAC 241
             S +C+ C
Sbjct:   123 STYCYRC 129


>POMBASE|SPBC6B1.06c [details] [associations]
            symbol:ubp14 "ubiquitin C-terminal hydrolase Ubp14"
            species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
            [GO:0008242 "omega peptidase activity" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=ISO]
            [GO:0071276 "cellular response to cadmium ion" evidence=IMP]
            [GO:0071585 "detoxification of cadmium ion" evidence=IMP]
            InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 PomBase:SPBC6B1.06c GO:GO:0005654 GO:GO:0043161
            GO:GO:0046872 EMBL:CU329671 GO:GO:0071276 GO:GO:0071585
            GO:GO:0008270 GenomeReviews:CU329671_GR InterPro:IPR015940
            SMART:SM00165 PROSITE:PS50030 Gene3D:3.30.40.10 InterPro:IPR013083
            SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 EMBL:D83659 KO:K11836 eggNOG:COG5207
            HOGENOM:HOG000162311 OMA:DDMVEDP PIR:T40647 RefSeq:NP_596085.1
            ProteinModelPortal:Q11119 STRING:Q11119 MEROPS:C19.A65
            EnsemblFungi:SPBC6B1.06c.1 GeneID:2541157 KEGG:spo:SPBC6B1.06c
            OrthoDB:EOG470XRN NextBio:20802270 Uniprot:Q11119
        Length = 775

 Score = 126 (49.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
 Identities = 28/91 (30%), Positives = 46/91 (50%)

Query:   164 LTSCDHLVASLSTDLARIPNPDTP-CNRCQHPRGNWLCLCCKEVLCSR--YV----NKHM 216
             LT+CDH++ +L  +   + N D   C++C      W+CL C  + C R  Y     N H 
Sbjct:   150 LTTCDHII-NLPENETYVTNLDNATCSKCDLAENLWMCLTCGALSCGRKQYGGGGGNGHA 208

Query:   217 LQHYQETNHSVALGYSDLS------VWCFAC 241
             L HY +T H +A+    +S      ++C++C
Sbjct:   209 LSHYDDTGHPLAVKLKSISPDGQADIYCYSC 239

 Score = 52 (23.4 bits), Expect = 5.6e-06, Sum P(2) = 5.6e-06
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query:    66 LCLCCKEVLCSRYVNKHMLRHYREKNHSVAL 96
             LCL C +  C     KH L H+ +  H + +
Sbjct:    40 LCLTCFQSGCGETGLKHSLVHFEQTLHPIVV 70


>UNIPROTKB|F8VZK5 [details] [associations]
            symbol:BRAP "BRCA1-associated protein" species:9606 "Homo
            sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639
            PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            GO:GO:0046872 GO:GO:0008270 EMBL:AC002996 Gene3D:3.30.40.10
            InterPro:IPR013083 HGNC:HGNC:1099 ChiTaRS:BRAP InterPro:IPR011422
            Pfam:PF07576 ProDom:PD017029 EMBL:AC137055 IPI:IPI01022318
            ProteinModelPortal:F8VZK5 SMR:F8VZK5 Ensembl:ENST00000547043
            ArrayExpress:F8VZK5 Bgee:F8VZK5 Uniprot:F8VZK5
        Length = 328

 Score = 130 (50.8 bits), Expect = 5.7e-06, P = 5.7e-06
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:    93 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 152

Query:   242 HAYLN 246
               Y++
Sbjct:   153 DNYVH 157

 Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:    93 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 152

Query:   109 HAYLN 113
               Y++
Sbjct:   153 DNYVH 157


>UNIPROTKB|B4DRM1 [details] [associations]
            symbol:BRAP "cDNA FLJ50182, highly similar to
            BRCA1-associated protein (EC 6.3.2.-)" species:9606 "Homo sapiens"
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
            InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
            PROSITE:PS50271 SMART:SM00184 SMART:SM00290 GO:GO:0046872
            GO:GO:0008270 EMBL:AC002996 Gene3D:3.30.40.10 InterPro:IPR013083
            UniGene:Hs.530940 HGNC:HGNC:1099 HOVERGEN:HBG050729 ChiTaRS:BRAP
            InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
            HOGENOM:HOG000190616 EMBL:AC137055 EMBL:AK299326 IPI:IPI00908635
            SMR:B4DRM1 STRING:B4DRM1 Ensembl:ENST00000539060 UCSC:uc010syh.2
            Uniprot:B4DRM1
        Length = 413

 Score = 130 (50.8 bits), Expect = 8.9e-06, P = 8.9e-06
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:   132 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 191

Query:   242 HAYLN 246
               Y++
Sbjct:   192 DNYVH 196

 Score = 126 (49.4 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:   132 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 191

Query:   109 HAYLN 113
               Y++
Sbjct:   192 DNYVH 196


>ZFIN|ZDB-GENE-050227-1 [details] [associations]
            symbol:fbxl22 "F-box and leucine-rich repeat protein
            22" species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 ZFIN:ZDB-GENE-050227-1
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00390000003748 EMBL:CR391977 IPI:IPI00495297
            Ensembl:ENSDART00000088884 Bgee:E7FC36 Uniprot:E7FC36
        Length = 527

 Score = 127 (49.8 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 25/61 (40%), Positives = 36/61 (59%)

Query:   167 CDHLVAS--LSTDLARIPN--PDT-PCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             C HL +S  ++ DL R PN  P +  C+ C+  +  W+CL C  V C RYVN H  +H++
Sbjct:     3 CPHLNSSVCMTVDLTRFPNGSPSSWCCSVCRSNKSPWVCLTCMNVHCGRYVNGHAKKHFE 62

Query:   222 E 222
             E
Sbjct:    63 E 63

 Score = 124 (48.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 24/61 (39%), Positives = 36/61 (59%)

Query:    34 CDHLVAS--LSSDLARIP--TPDT-PCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYR 88
             C HL +S  ++ DL R P  +P +  C++C+  +  W+CL C  V C RYVN H  +H+ 
Sbjct:     3 CPHLNSSVCMTVDLTRFPNGSPSSWCCSVCRSNKSPWVCLTCMNVHCGRYVNGHAKKHFE 62

Query:    89 E 89
             E
Sbjct:    63 E 63

 Score = 47 (21.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 14/53 (26%), Positives = 26/53 (49%)

Query:   208 CS-RYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYL-NAQAILQLQPVHE 258
             CS R  ++  L+   +  HSV +  +  S +C+ C  ++ N   +  +Q V E
Sbjct:    69 CSQRKPDREKLREKGQ-QHSVCMDCNSYSTFCYKCDEFVVNDTKLGHVQRVRE 120


>ZFIN|ZDB-GENE-040718-168 [details] [associations]
            symbol:brap "BRCA1 associated protein" species:7955
            "Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR001607
            InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
            PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            ZFIN:ZDB-GENE-040718-168 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.70.330 Gene3D:3.30.40.10 InterPro:IPR013083 CTD:8315
            eggNOG:NOG272422 HOVERGEN:HBG050729 KO:K10632 OrthoDB:EOG4HHP1Z
            InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
            HOGENOM:HOG000190616 EMBL:BC076350 IPI:IPI00491025
            RefSeq:NP_001002466.1 UniGene:Dr.80255 ProteinModelPortal:Q6DGJ4
            STRING:Q6DGJ4 PRIDE:Q6DGJ4 GeneID:436739 KEGG:dre:436739
            InParanoid:Q6DGJ4 NextBio:20831178 ArrayExpress:Q6DGJ4 Bgee:Q6DGJ4
            Uniprot:Q6DGJ4
        Length = 578

 Score = 131 (51.2 bits), Expect = 1.2e-05, P = 1.2e-05
 Identities = 41/145 (28%), Positives = 68/145 (46%)

Query:   116 AILQLRPVHETSYVLKF--GRALP-FNTGQHPK----VKEDDEMMLGAESGSVRHL--TS 166
             A+ QL  V E + V+K   G +LP  +  + PK    ++  DE + G  +    H   + 
Sbjct:   216 AVCQLVYV-ERAEVIKSEEGASLPVMDLTELPKCTVCLERMDESVNGVLTTLCNHSFHSQ 274

Query:   167 CDHLVASLSTDLARI---PNP--DTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQ 221
             C       S  + R    P P  +  C  C      W+CL C  + C RYV++H  +H++
Sbjct:   275 CLQRWEDASCPVCRYCQTPEPVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFE 334

Query:   222 ETNHSVALGYSDLSVWCFACHAYLN 246
             ET H+ A+  ++  VW +A   Y++
Sbjct:   335 ETQHTYAMQLTNHRVWDYAGDNYVH 359

 Score = 126 (49.4 bits), Expect = 4.3e-05, P = 4.3e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:   295 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 354

Query:   109 HAYLN 113
               Y++
Sbjct:   355 DNYVH 359


>UNIPROTKB|H0YL81 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC118274
            EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3 Ensembl:ENST00000559771
            Bgee:H0YL81 Uniprot:H0YL81
        Length = 126

 Score = 107 (42.7 bits), Expect = 1.3e-05, P = 1.3e-05
 Identities = 23/72 (31%), Positives = 34/72 (47%)

Query:    57 MCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYR------------EKN----HSVALDYSD 100
             +C+  +  W+CL C  V C RYVN H  +HY             EK     H+V +D S 
Sbjct:     9 VCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCSS 68

Query:   101 LSVWCFACHAYL 112
              S +C+ C  ++
Sbjct:    69 YSTYCYRCDDFV 80

 Score = 102 (41.0 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 22/71 (30%), Positives = 34/71 (47%)

Query:   191 CQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQE-----TNH-----------SVALGYSDL 234
             C+  +  W+CL C  V C RYVN H  +HY++     TNH           +V +  S  
Sbjct:    10 CRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQVPLTNHKKSEKQDKVQHTVCMDCSSY 69

Query:   235 SVWCFACHAYL 245
             S +C+ C  ++
Sbjct:    70 STYCYRCDDFV 80


>UNIPROTKB|F1NJH4 [details] [associations]
            symbol:BRAP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] InterPro:IPR001841
            InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
            PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
            Gene3D:3.30.40.10 InterPro:IPR013083 InterPro:IPR011422
            Pfam:PF07576 ProDom:PD017029 GeneTree:ENSGT00500000044909
            EMBL:AADN02034921 IPI:IPI00810579 Ensembl:ENSGALT00000007407
            ArrayExpress:F1NJH4 Uniprot:F1NJH4
        Length = 556

 Score = 130 (50.8 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:   276 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 335

Query:   242 HAYLN 246
               Y++
Sbjct:   336 DNYVH 340

 Score = 126 (49.4 bits), Expect = 4.1e-05, P = 4.1e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:   276 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 335

Query:   109 HAYLN 113
               Y++
Sbjct:   336 DNYVH 340


>UNIPROTKB|J3KNN7 [details] [associations]
            symbol:BRAP "BRCA1-associated protein" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] InterPro:IPR001841
            InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
            PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            GO:GO:0000166 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330
            EMBL:AC002996 Gene3D:3.30.40.10 InterPro:IPR013083 HGNC:HGNC:1099
            ChiTaRS:BRAP InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
            EMBL:AC137055 ProteinModelPortal:J3KNN7 Ensembl:ENST00000327551
            Uniprot:J3KNN7
        Length = 562

 Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:   281 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 340

Query:   242 HAYLN 246
               Y++
Sbjct:   341 DNYVH 345

 Score = 126 (49.4 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:   281 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 340

Query:   109 HAYLN 113
               Y++
Sbjct:   341 DNYVH 345


>SGD|S000001002 [details] [associations]
            symbol:ETP1 "Putative protein of unknown function required
            for growth on ethanol" species:4932 "Saccharomyces cerevisiae"
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0045471 "response to ethanol"
            evidence=IMP] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008139 "nuclear
            localization sequence binding" evidence=IDA] [GO:0043130 "ubiquitin
            binding" evidence=IDA] InterPro:IPR001841 InterPro:IPR001607
            Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271
            SMART:SM00184 SMART:SM00290 SGD:S000001002 Prosite:PS00518
            GO:GO:0005737 GO:GO:0045471 GO:GO:0046872 EMBL:BK006934
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:U11582
            GO:GO:0043130 eggNOG:NOG272422 KO:K10632 GO:GO:0008139
            InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
            GeneTree:ENSGT00500000044909 HOGENOM:HOG000190616 OrthoDB:EOG4H75M9
            EMBL:AY558115 PIR:S46825 RefSeq:NP_011853.1
            ProteinModelPortal:P38748 SMR:P38748 DIP:DIP-2987N IntAct:P38748
            MINT:MINT-436947 STRING:P38748 EnsemblFungi:YHL010C GeneID:856376
            KEGG:sce:YHL010C CYGD:YHL010c OMA:CDHSFQC NextBio:981864
            Genevestigator:P38748 GermOnline:YHL010C Uniprot:P38748
        Length = 585

 Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 27/81 (33%), Positives = 38/81 (46%)

Query:   167 CDHLVASLSTD-LARIPNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNH 225
             C H    LS + L +       C  C      W+CL C  V C RY +KH ++HY+ET H
Sbjct:   279 CRHSSLRLSRESLLKQAGDSAHCATCGSTDNLWICLICGNVGCGRYNSKHAIKHYEETLH 338

Query:   226 SVALGYSDLSVWCFACHAYLN 246
               A+      VW +A   Y++
Sbjct:   339 CFAMDIRTQRVWDYAGDNYVH 359

 Score = 128 (50.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 27/81 (33%), Positives = 37/81 (45%)

Query:    34 CDHLVASLSSD-LARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNH 92
             C H    LS + L +       C  C      W+CL C  V C RY +KH ++HY E  H
Sbjct:   279 CRHSSLRLSRESLLKQAGDSAHCATCGSTDNLWICLICGNVGCGRYNSKHAIKHYEETLH 338

Query:    93 SVALDYSDLSVWCFACHAYLN 113
               A+D     VW +A   Y++
Sbjct:   339 CFAMDIRTQRVWDYAGDNYVH 359


>UNIPROTKB|F1NR06 [details] [associations]
            symbol:BRAP "Uncharacterized protein" species:9031 "Gallus
            gallus" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0000151 "ubiquitin ligase
            complex" evidence=IEA] [GO:0000165 "MAPK cascade" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007265 "Ras protein
            signal transduction" evidence=IEA] [GO:0008139 "nuclear
            localization sequence binding" evidence=IEA] [GO:0009968 "negative
            regulation of signal transduction" evidence=IEA] InterPro:IPR001841
            InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
            PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            GO:GO:0005737 GO:GO:0000165 GO:GO:0007265 GO:GO:0000166
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0009968
            OMA:CLQRWED GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576
            ProDom:PD017029 GeneTree:ENSGT00500000044909 EMBL:AADN02034921
            IPI:IPI00820070 Ensembl:ENSGALT00000039032 ArrayExpress:F1NR06
            Uniprot:F1NR06
        Length = 585

 Score = 130 (50.8 bits), Expect = 1.5e-05, P = 1.5e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:   305 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 364

Query:   242 HAYLN 246
               Y++
Sbjct:   365 DNYVH 369

 Score = 126 (49.4 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:   305 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 364

Query:   109 HAYLN 113
               Y++
Sbjct:   365 DNYVH 369


>MGI|MGI:1919649 [details] [associations]
            symbol:Brap "BRCA1 associated protein" species:10090 "Mus
            musculus" [GO:0000151 "ubiquitin ligase complex" evidence=ISO]
            [GO:0000165 "MAPK cascade" evidence=ISO] [GO:0000166 "nucleotide
            binding" evidence=IEA] [GO:0004842 "ubiquitin-protein ligase
            activity" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
            [GO:0007265 "Ras protein signal transduction" evidence=ISO]
            [GO:0008139 "nuclear localization sequence binding" evidence=ISO]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009968 "negative
            regulation of signal transduction" evidence=ISO] [GO:0016874
            "ligase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] InterPro:IPR001841 InterPro:IPR001607
            InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
            PROSITE:PS50271 SMART:SM00184 SMART:SM00290 UniPathway:UPA00143
            MGI:MGI:1919649 Prosite:PS00518 GO:GO:0005737 GO:GO:0000165
            GO:GO:0007265 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.70.330 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 GO:GO:0009968 CTD:8315 eggNOG:NOG272422
            HOVERGEN:HBG050729 KO:K10632 OMA:CLQRWED OrthoDB:EOG4HHP1Z
            GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
            EMBL:AF321920 EMBL:AF321921 EMBL:BC038490 EMBL:AK013885
            EMBL:AK034212 IPI:IPI00117933 IPI:IPI00453542 IPI:IPI00453543
            RefSeq:NP_082503.2 UniGene:Mm.153372 ProteinModelPortal:Q99MP8
            SMR:Q99MP8 STRING:Q99MP8 PhosphoSite:Q99MP8 PaxDb:Q99MP8
            PRIDE:Q99MP8 Ensembl:ENSMUST00000031414 Ensembl:ENSMUST00000111765
            Ensembl:ENSMUST00000127703 GeneID:72399 KEGG:mmu:72399
            UCSC:uc008zkc.1 UCSC:uc008zkd.1 GeneTree:ENSGT00500000044909
            HOGENOM:HOG000190616 InParanoid:Q99MP8 NextBio:336190 Bgee:Q99MP8
            CleanEx:MM_BRAP Genevestigator:Q99MP8 GermOnline:ENSMUSG00000029458
            Uniprot:Q99MP8
        Length = 591

 Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:   310 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 369

Query:   242 HAYLN 246
               Y++
Sbjct:   370 DNYVH 374

 Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:   310 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 369

Query:   109 HAYLN 113
               Y++
Sbjct:   370 DNYVH 374


>UNIPROTKB|A6H716 [details] [associations]
            symbol:BRAP "BRAP protein" species:9913 "Bos taurus"
            [GO:0009968 "negative regulation of signal transduction"
            evidence=IEA] [GO:0008139 "nuclear localization sequence binding"
            evidence=IEA] [GO:0007265 "Ras protein signal transduction"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IEA] [GO:0000165 "MAPK
            cascade" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001841
            InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
            PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            GO:GO:0005737 GO:GO:0000165 GO:GO:0007265 GO:GO:0000166
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.70.330 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0009968
            CTD:8315 eggNOG:NOG272422 HOVERGEN:HBG050729 KO:K10632 OMA:CLQRWED
            OrthoDB:EOG4HHP1Z GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576
            ProDom:PD017029 GeneTree:ENSGT00500000044909 HOGENOM:HOG000190616
            EMBL:DAAA02045293 EMBL:BC146079 IPI:IPI00854454
            RefSeq:NP_001092478.1 UniGene:Bt.103041 STRING:A6H716
            Ensembl:ENSBTAT00000001552 GeneID:518844 KEGG:bta:518844
            InParanoid:A6H716 NextBio:20872746 Uniprot:A6H716
        Length = 592

 Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:   311 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 370

Query:   242 HAYLN 246
               Y++
Sbjct:   371 DNYVH 375

 Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:   311 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 370

Query:   109 HAYLN 113
               Y++
Sbjct:   371 DNYVH 375


>UNIPROTKB|F1PGI5 [details] [associations]
            symbol:BRAP "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0009968 "negative regulation of signal
            transduction" evidence=IEA] [GO:0008139 "nuclear localization
            sequence binding" evidence=IEA] [GO:0007265 "Ras protein signal
            transduction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0004842 "ubiquitin-protein ligase activity" evidence=IEA]
            [GO:0000165 "MAPK cascade" evidence=IEA] [GO:0000151 "ubiquitin
            ligase complex" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
            InterPro:IPR001841 InterPro:IPR001607 InterPro:IPR012677
            Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271
            SMART:SM00184 SMART:SM00290 GO:GO:0005737 GO:GO:0000165
            GO:GO:0007265 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.70.330 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 GO:GO:0000151 GO:GO:0009968 CTD:8315 KO:K10632
            OMA:CLQRWED GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576
            ProDom:PD017029 GeneTree:ENSGT00500000044909 EMBL:AAEX03014674
            RefSeq:XP_543397.3 Ensembl:ENSCAFT00000013670 GeneID:486271
            KEGG:cfa:486271 Uniprot:F1PGI5
        Length = 592

 Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:   311 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 370

Query:   242 HAYLN 246
               Y++
Sbjct:   371 DNYVH 375

 Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:   311 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 370

Query:   109 HAYLN 113
               Y++
Sbjct:   371 DNYVH 375


>UNIPROTKB|Q7Z569 [details] [associations]
            symbol:BRAP "BRCA1-associated protein" species:9606 "Homo
            sapiens" [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0009968 "negative regulation
            of signal transduction" evidence=IDA] [GO:0004842
            "ubiquitin-protein ligase activity" evidence=IDA] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0000151 "ubiquitin ligase complex"
            evidence=IDA] [GO:0000165 "MAPK cascade" evidence=IDA] [GO:0007265
            "Ras protein signal transduction" evidence=IDA] [GO:0008139
            "nuclear localization sequence binding" evidence=IDA] [GO:0005515
            "protein binding" evidence=IPI] InterPro:IPR001841
            InterPro:IPR001607 InterPro:IPR012677 Pfam:PF02148 Pfam:PF13639
            PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            UniPathway:UPA00143 Prosite:PS00518 GO:GO:0005737 GO:GO:0000165
            GO:GO:0007265 GO:GO:0000166 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.70.330 EMBL:CH471054 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0004842 GO:GO:0000151 GO:GO:0009968
            EMBL:AF035620 EMBL:AY332222 EMBL:BC136698 EMBL:BC136699
            EMBL:AF035950 IPI:IPI00396089 RefSeq:NP_006759.3 UniGene:Hs.530940
            ProteinModelPortal:Q7Z569 SMR:Q7Z569 IntAct:Q7Z569 STRING:Q7Z569
            PhosphoSite:Q7Z569 DMDM:296434410 PaxDb:Q7Z569 PRIDE:Q7Z569
            Ensembl:ENST00000419234 GeneID:8315 KEGG:hsa:8315 UCSC:uc001tsn.4
            CTD:8315 GeneCards:GC12M112080 H-InvDB:HIX0036684 HGNC:HGNC:1099
            HPA:HPA040357 MIM:604986 neXtProt:NX_Q7Z569 PharmGKB:PA25410
            eggNOG:NOG272422 HOVERGEN:HBG050729 InParanoid:Q7Z569 KO:K10632
            OMA:CLQRWED OrthoDB:EOG4HHP1Z PhylomeDB:Q7Z569 ChiTaRS:BRAP
            GenomeRNAi:8315 NextBio:31141 ArrayExpress:Q7Z569 Bgee:Q7Z569
            CleanEx:HS_BRAP Genevestigator:Q7Z569 GermOnline:ENSG00000089234
            GO:GO:0008139 InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
            Uniprot:Q7Z569
        Length = 592

 Score = 130 (50.8 bits), Expect = 1.6e-05, P = 1.6e-05
 Identities = 21/65 (32%), Positives = 36/65 (55%)

Query:   182 PNPDTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             P  +  C  C      W+CL C  + C RYV++H  +H++ET H+ A+  ++  VW +A 
Sbjct:   311 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 370

Query:   242 HAYLN 246
               Y++
Sbjct:   371 DNYVH 375

 Score = 126 (49.4 bits), Expect = 4.5e-05, P = 4.5e-05
 Identities = 20/65 (30%), Positives = 34/65 (52%)

Query:    49 PTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             P  +  C  C      W+CL C  + C RYV++H  +H+ E  H+ A+  ++  VW +A 
Sbjct:   311 PVEENKCFECGVQENLWICLICGHIGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAG 370

Query:   109 HAYLN 113
               Y++
Sbjct:   371 DNYVH 375


>UNIPROTKB|F1N0I6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 OMA:DCLRSFT EMBL:DAAA02028746
            IPI:IPI00715279 Ensembl:ENSBTAT00000011598 Uniprot:F1N0I6
        Length = 521

 Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 32/101 (31%), Positives = 50/101 (49%)

Query:    34 CDHLVAS--LSSDLARIP--TPDTPC--NMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY 87
             C HL +S  ++ D A+ P  +P + C   +C+  +  W+CL C  V C RYVN H  +HY
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSAVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHY 62

Query:    88 ---------------REK-NHSVALDYSDLSVWCFACHAYL 112
                            +EK  H+V +D S  S +C+ C  ++
Sbjct:    63 EDAQIPLTNHKKSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 103

 Score = 126 (49.4 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 32/101 (31%), Positives = 49/101 (48%)

Query:   167 CDHLVAS--LSTDLARIPN--PDTPCNR--CQHPRGNWLCLCCKEVLCSRYVNKHMLQHY 220
             C HL +S  ++ D A+ PN  P + C    C+  +  W+CL C  V C RYVN H  +HY
Sbjct:     3 CPHLSSSVCIAPDSAKFPNGSPSSWCCSAVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHY 62

Query:   221 QE-----TNH-----------SVALGYSDLSVWCFACHAYL 245
             ++     TNH           +V +  S  S +C+ C  ++
Sbjct:    63 EDAQIPLTNHKKSEKQEKAQHTVCMDCSSYSTYCYRCDDFV 103


>ASPGD|ASPL0000042460 [details] [associations]
            symbol:AN10251 species:162425 "Emericella nidulans"
            [GO:0005829 "cytosol" evidence=IEA] [GO:0043130 "ubiquitin binding"
            evidence=IEA] [GO:0008139 "nuclear localization sequence binding"
            evidence=IEA] [GO:0006355 "regulation of transcription,
            DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0003700 "sequence-specific DNA binding
            transcription factor activity" evidence=IEA] [GO:0043565
            "sequence-specific DNA binding" evidence=IEA] [GO:0045471 "response
            to ethanol" evidence=IEA] InterPro:IPR001841 InterPro:IPR001607
            Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271
            SMART:SM00184 SMART:SM00290 GO:GO:0046872 EMBL:BN001307
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
            HOGENOM:HOG000190616 EnsemblFungi:CADANIAT00008666 OMA:AHAFAHY
            Uniprot:C8VLC6
        Length = 503

 Score = 123 (48.4 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 21/59 (35%), Positives = 31/59 (52%)

Query:    55 CNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLN 113
             C++C      W+CL C  V C RY   H   HY + +H+ A+D S   VW +   AY++
Sbjct:   234 CSVCHSDVNLWVCLICGNVGCGRYDGAHAFAHYSQTSHAFAMDLSTQRVWDYIGDAYVH 292

 Score = 120 (47.3 bits), Expect = 0.00017, P = 0.00017
 Identities = 21/59 (35%), Positives = 30/59 (50%)

Query:   188 CNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLN 246
             C+ C      W+CL C  V C RY   H   HY +T+H+ A+  S   VW +   AY++
Sbjct:   234 CSVCHSDVNLWVCLICGNVGCGRYDGAHAFAHYSQTSHAFAMDLSTQRVWDYIGDAYVH 292


>FB|FBgn0038686 [details] [associations]
            symbol:CG5555 species:7227 "Drosophila melanogaster"
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
            InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
            PROSITE:PS50271 SMART:SM00184 SMART:SM00290 EMBL:AE014297
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            KO:K10632 OMA:CLQRWED InterPro:IPR011422 Pfam:PF07576
            ProDom:PD017029 GeneTree:ENSGT00500000044909 eggNOG:COG5207
            EMBL:AY047557 RefSeq:NP_650789.1 UniGene:Dm.4649 SMR:Q9VDZ1
            IntAct:Q9VDZ1 MINT:MINT-759759 STRING:Q9VDZ1
            EnsemblMetazoa:FBtr0083746 GeneID:42302 KEGG:dme:Dmel_CG5555
            UCSC:CG5555-RA FlyBase:FBgn0038686 InParanoid:Q9VDZ1
            OrthoDB:EOG4R7SS3 GenomeRNAi:42302 NextBio:828132 Uniprot:Q9VDZ1
        Length = 555

 Score = 122 (48.0 bits), Expect = 0.00011, P = 0.00011
 Identities = 21/56 (37%), Positives = 29/56 (51%)

Query:   185 DTPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFA 240
             D+ C  C+     W+CL C  V C RY   H   H++ TNH+ A+     SVW +A
Sbjct:   298 DSVCMECEGTDSLWICLICGHVGCGRYQGGHAAAHFRATNHTFAMQLGTSSVWDYA 353

 Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
 Identities = 21/56 (37%), Positives = 28/56 (50%)

Query:    52 DTPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFA 107
             D+ C  C+     W+CL C  V C RY   H   H+R  NH+ A+     SVW +A
Sbjct:   298 DSVCMECEGTDSLWICLICGHVGCGRYQGGHAAAHFRATNHTFAMQLGTSSVWDYA 353


>TAIR|locus:2046951 [details] [associations]
            symbol:AT2G14830 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0008150 "biological_process" evidence=ND]
            [GO:0008270 "zinc ion binding" evidence=IEA] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AC004705 InterPro:IPR005061
            Pfam:PF03398 IPI:IPI00520833 PIR:T02593 RefSeq:NP_179090.1
            UniGene:At.40489 ProteinModelPortal:O80969 SMR:O80969
            EnsemblPlants:AT2G14830.1 GeneID:815971 KEGG:ath:AT2G14830
            TAIR:At2g14830 eggNOG:NOG259124 HOGENOM:HOG000115150
            InParanoid:O80969 OMA:KAMHVHP PhylomeDB:O80969
            ProtClustDB:CLSN2683466 ArrayExpress:O80969 Genevestigator:O80969
            Uniprot:O80969
        Length = 454

 Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
 Identities = 23/55 (41%), Positives = 33/55 (60%)

Query:     5 SSKLPENGPEDEDEMMIGGELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCK 59
             SS  P+   ++  + ++G   GWV    +CDHL  +LS DL  +PTPDTPC+  K
Sbjct:    11 SSSPPKEVADETQDWILGAGSGWVEARKTCDHL-NTLSPDLLHLPTPDTPCSRYK 64


>TAIR|locus:2060045 [details] [associations]
            symbol:BRIZ1 "AT2G42160" species:3702 "Arabidopsis
            thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0000151 "ubiquitin ligase complex"
            evidence=IC] [GO:0004842 "ubiquitin-protein ligase activity"
            evidence=IDA] [GO:0010029 "regulation of seed germination"
            evidence=IMP] [GO:0046982 "protein heterodimerization activity"
            evidence=IDA] InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148
            PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            EMBL:CP002685 GO:GO:0046872 GO:GO:0008270 GO:GO:0016787
            GO:GO:0046982 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0010029
            GO:GO:0004842 GO:GO:0000151 KO:K10632 InterPro:IPR011422
            Pfam:PF07576 ProDom:PD017029 OMA:CDHSFQC EMBL:HQ127733
            IPI:IPI00541428 RefSeq:NP_181746.2 UniGene:At.42743
            UniGene:At.42745 ProteinModelPortal:E5KGE0 SMR:E5KGE0 PRIDE:E5KGE0
            EnsemblPlants:AT2G42160.1 GeneID:818816 KEGG:ath:AT2G42160
            Uniprot:E5KGE0
        Length = 488

 Score = 119 (46.9 bits), Expect = 0.00021, P = 0.00021
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query:    55 CNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFACHAYLN 113
             C++C      W CL C  V C RY   H +RH++E +H  +LD     +W +   +Y++
Sbjct:   225 CSICGKTENVWACLVCGFVGCGRYKEGHSIRHWKETHHCYSLDLRTQQIWDYVGDSYVH 283


>WB|WBGene00013506 [details] [associations]
            symbol:usp-3 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 EMBL:AL132902 GeneTree:ENSGT00690000102047
            MEROPS:C19.026 RefSeq:NP_493434.3 ProteinModelPortal:Q9GRV2
            SMR:Q9GRV2 PaxDb:Q9GRV2 EnsemblMetazoa:Y71A12B.9 GeneID:190579
            KEGG:cel:CELE_Y71A12B.9 UCSC:Y71A12B.9 CTD:190579
            WormBase:Y71A12B.9 HOGENOM:HOG000020065 NextBio:946258
            Uniprot:Q9GRV2
        Length = 550

 Score = 119 (46.9 bits), Expect = 0.00025, P = 0.00025
 Identities = 18/56 (32%), Positives = 32/56 (57%)

Query:   186 TPCNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFAC 241
             T C+ C +   + +CL C  +LC R  + H L H++ET+H V +      ++C++C
Sbjct:    51 TFCDECDNCNKSLMCLTCGRILCGRNDSGHALHHFEETSHPVVIDCISFELYCYSC 106

 Score = 115 (45.5 bits), Expect = 0.00070, P = 0.00070
 Identities = 18/56 (32%), Positives = 31/56 (55%)

Query:    53 TPCNMCKHPRGNWLCLCCKEVLCSRYVNKHMLRHYREKNHSVALDYSDLSVWCFAC 108
             T C+ C +   + +CL C  +LC R  + H L H+ E +H V +D     ++C++C
Sbjct:    51 TFCDECDNCNKSLMCLTCGRILCGRNDSGHALHHFEETSHPVVIDCISFELYCYSC 106


>TAIR|locus:2057469 [details] [associations]
            symbol:BRIZ2 "AT2G26000" species:3702 "Arabidopsis
            thaliana" [GO:0003824 "catalytic activity" evidence=ISS]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000151 "ubiquitin
            ligase complex" evidence=IC] [GO:0004842 "ubiquitin-protein ligase
            activity" evidence=IDA] [GO:0010029 "regulation of seed
            germination" evidence=IMP] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0046982 "protein heterodimerization activity"
            evidence=IDA] [GO:0009688 "abscisic acid biosynthetic process"
            evidence=RCA] InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148
            Pfam:PF13639 PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184
            SMART:SM00290 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0046872
            GO:GO:0008270 GO:GO:0046982 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0010029 GO:GO:0004842 GO:GO:0000151 GO:GO:0043130
            EMBL:AC004747 eggNOG:NOG272422 KO:K10632 OMA:CLQRWED
            InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029
            HOGENOM:HOG000190616 EMBL:BT015082 EMBL:BT015905 EMBL:HQ127734
            IPI:IPI00657531 PIR:T02623 RefSeq:NP_001031419.1 UniGene:At.50100
            ProteinModelPortal:O80996 SMR:O80996 STRING:O80996 PRIDE:O80996
            EnsemblPlants:AT2G26000.2 GeneID:817141 KEGG:ath:AT2G26000
            TAIR:At2g26000 PhylomeDB:O80996 ProtClustDB:CLSN2681167
            ArrayExpress:O80996 Genevestigator:O80996 Uniprot:O80996
        Length = 479

 Score = 109 (43.4 bits), Expect = 0.00028, Sum P(2) = 0.00028
 Identities = 20/59 (33%), Positives = 29/59 (49%)

Query:   188 CNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLN 246
             C  CQ     W+C+ C  V C RY   H  +H++ET H  +L      VW +A   Y++
Sbjct:   218 CCVCQTTENLWMCVICGVVGCGRYKEGHARRHWEETEHCYSLELETQRVWDYAGDNYVH 276

 Score = 49 (22.3 bits), Expect = 0.00028, Sum P(2) = 0.00028
 Identities = 46/200 (23%), Positives = 77/200 (38%)

Query:    23 GELGWVRHLASCDHLVASLSSDLARIPTPDTPCNMCKHPRGNWLCLCCKEVLCSRYVNKH 82
             GE   V HL S + + +S SS  + +P    P  +C     N +        C  ++ +H
Sbjct:    29 GETRGVMHLISDNAVSSSSSSSSSNLPIGRNPL-VCVLGVPNHMTYADFCQFCGSFI-QH 86

Query:    83 ML--RHYR----EKNHSVALDY-SDLSVWCFACH---AYLNA--QAILQLR---PVHETS 127
             +L  R  R    E  +S+ + + S  S   F  H      N+  + + +L     V  T 
Sbjct:    87 ILDMRTVRNDDIENRYSILIRFDSQESTDTFFQHFRGKQFNSLDEDVCRLLFALDVQFTG 146

Query:   128 YVLKFGRALPFNTG--QHPKVKEDDEMMLGAESGSVRHLTSCDHLVASLSTDLARIPNPD 185
             Y        P   G  + P      E  L  ++G +   T C+H  +   + ++  P+  
Sbjct:   147 YSGSIDHTQPSAAGPIEQPTCPVCLER-LDQDTGGIL-TTMCNH--SFHCSCISNWPDSS 202

Query:   186 TP-CNRCQHPRGNWLCLCCK 204
              P C  CQ    N +C  C+
Sbjct:   203 CPVCRYCQQQPENSVCCVCQ 222


>UNIPROTKB|F1NQJ6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
            [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] [GO:0016578 "histone deubiquitination"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0008234 GO:GO:0031647 GO:GO:0000790
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0016578
            GO:GO:0004221 GO:GO:0000278 GeneTree:ENSGT00690000102047
            OMA:DCLRSFT EMBL:AADN02040443 IPI:IPI00579359
            Ensembl:ENSGALT00000005420 Uniprot:F1NQJ6
        Length = 521

 Score = 118 (46.6 bits), Expect = 0.00030, P = 0.00030
 Identities = 26/79 (32%), Positives = 39/79 (49%)

Query:    51 PDTPCN-MCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY---------------REK-NHS 93
             P + CN +C+  +  W+CL C  V C RYVN H  +HY               +EK  H+
Sbjct:    23 PSSFCNSVCRSNKSPWVCLTCSSVHCGRYVNGHAKKHYEDAQIPMTNHKKTEKQEKVQHT 82

Query:    94 VALDYSDLSVWCFACHAYL 112
             V +D S  S +C+ C  ++
Sbjct:    83 VCMDCSSYSTYCYRCDDFV 101


>UNIPROTKB|H0YNX9 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001607 Pfam:PF02148 PROSITE:PS50271
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 EMBL:AC118274
            EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3 Ensembl:ENST00000559276
            Bgee:H0YNX9 Uniprot:H0YNX9
        Length = 39

 Score = 94 (38.1 bits), Expect = 0.00037, P = 0.00037
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query:    57 MCKHPRGNWLCLCCKEVLCSRYVNKHMLRHY 87
             +C+  +  W+CL C  V C RYVN H  +HY
Sbjct:     9 VCRSNKSPWVCLTCSSVHCGRYVNGHAKKHY 39

 Score = 91 (37.1 bits), Expect = 0.00078, P = 0.00078
 Identities = 14/30 (46%), Positives = 18/30 (60%)

Query:   191 CQHPRGNWLCLCCKEVLCSRYVNKHMLQHY 220
             C+  +  W+CL C  V C RYVN H  +HY
Sbjct:    10 CRSNKSPWVCLTCSSVHCGRYVNGHAKKHY 39


>CGD|CAL0005604 [details] [associations]
            symbol:orf19.1576 species:5476 "Candida albicans" [GO:0043130
            "ubiquitin binding" evidence=IEA] [GO:0008139 "nuclear localization
            sequence binding" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0045471 "response to ethanol" evidence=IEA] InterPro:IPR001841
            InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
            PROSITE:PS50271 SMART:SM00184 SMART:SM00290 CGD:CAL0005604
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            EMBL:AACQ01000008 EMBL:AACQ01000007 eggNOG:NOG272422 KO:K10632
            InterPro:IPR011422 Pfam:PF07576 ProDom:PD017029 RefSeq:XP_722477.1
            RefSeq:XP_722618.1 ProteinModelPortal:Q5ALK2 STRING:Q5ALK2
            GeneID:3635818 GeneID:3635931 KEGG:cal:CaO19.1576
            KEGG:cal:CaO19.9149 Uniprot:Q5ALK2
        Length = 622

 Score = 117 (46.2 bits), Expect = 0.00049, P = 0.00049
 Identities = 20/60 (33%), Positives = 31/60 (51%)

Query:   188 CNRCQHPRGNWLCLCCKEVLCSRYV-NKHMLQHYQETNHSVALGYSDLSVWCFACHAYLN 246
             C  C      W+CL C  + CSRY   +H L+H+ +T H  A+  +   VW +A   Y++
Sbjct:   329 CMECDETENLWICLICGNIGCSRYAPEQHSLKHFVDTGHCFAMEIATSRVWDYAGDKYVH 388


>POMBASE|SPAC16E8.13 [details] [associations]
            symbol:SPAC16E8.13 "ubiquitin-protein ligase E3
            (predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004842
            "ubiquitin-protein ligase activity" evidence=ISM] [GO:0005829
            "cytosol" evidence=IDA] [GO:0008270 "zinc ion binding"
            evidence=ISM] [GO:0016567 "protein ubiquitination" evidence=ISM]
            InterPro:IPR001841 InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639
            PROSITE:PS50089 PROSITE:PS50271 SMART:SM00184 SMART:SM00290
            PomBase:SPAC16E8.13 Prosite:PS00518 GO:GO:0005829 EMBL:CU329670
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0004842 eggNOG:NOG272422 KO:K10632 InterPro:IPR011422
            Pfam:PF07576 ProDom:PD017029 HOGENOM:HOG000190616 PIR:T37793
            RefSeq:NP_594226.1 ProteinModelPortal:O13747 STRING:O13747
            EnsemblFungi:SPAC16E8.13.1 GeneID:2542333 KEGG:spo:SPAC16E8.13
            OMA:CLDRLDS OrthoDB:EOG4H75M9 NextBio:20803394 Uniprot:O13747
        Length = 547

 Score = 115 (45.5 bits), Expect = 0.00069, P = 0.00069
 Identities = 20/59 (33%), Positives = 30/59 (50%)

Query:   188 CNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLN 246
             C  C + +  W+CL C  + C RY + H  QHY +T H  A+      VW +A   Y++
Sbjct:   262 CTVCCYDKDLWICLICGNIGCGRYHDAHAKQHYVDTAHCYAMELETQRVWDYAGDNYVH 320


>WB|WBGene00017144 [details] [associations]
            symbol:EEED8.16 species:6239 "Caenorhabditis elegans"
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001841
            InterPro:IPR001607 Pfam:PF02148 Pfam:PF13639 PROSITE:PS50089
            PROSITE:PS50271 SMART:SM00184 SMART:SM00290 Prosite:PS00518
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            eggNOG:NOG272422 KO:K10632 OMA:CLQRWED InterPro:IPR011422
            Pfam:PF07576 ProDom:PD017029 GeneTree:ENSGT00500000044909
            HOGENOM:HOG000190616 EMBL:FO081042 RefSeq:NP_495016.1
            ProteinModelPortal:Q95QN6 SMR:Q95QN6 DIP:DIP-24711N IntAct:Q95QN6
            MINT:MINT-1123262 STRING:Q95QN6 PaxDb:Q95QN6
            EnsemblMetazoa:EEED8.16.1 EnsemblMetazoa:EEED8.16.2 GeneID:173917
            KEGG:cel:CELE_EEED8.16 UCSC:EEED8.16 CTD:173917 WormBase:EEED8.16
            InParanoid:Q95QN6 NextBio:881657 Uniprot:Q95QN6
        Length = 590

 Score = 114 (45.2 bits), Expect = 0.00099, P = 0.00099
 Identities = 19/59 (32%), Positives = 31/59 (52%)

Query:   188 CNRCQHPRGNWLCLCCKEVLCSRYVNKHMLQHYQETNHSVALGYSDLSVWCFACHAYLN 246
             CN C      W+CL C  + C RY  +H  +H++ T+H+ +L      VW +A   Y++
Sbjct:   310 CNDCGMSNDLWICLICGNIGCGRYAEQHAQRHWELTSHTYSLKVGGERVWDYAGDNYVH 368


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.323   0.135   0.453    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      279       279   0.00081  115 3  11 22  0.45    33
                                                     33  0.41    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  75
  No. of states in DFA:  612 (65 KB)
  Total size of DFA:  236 KB (2123 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  24.56u 0.18s 24.74t   Elapsed:  00:00:01
  Total cpu time:  24.57u 0.18s 24.75t   Elapsed:  00:00:01
  Start:  Fri May 10 13:22:27 2013   End:  Fri May 10 13:22:28 2013
the Gene Ontology

BLAST Results

Query Summary

Query Sequence

High Scoring Gene Products

Raw Blast Data


Symbol, full name	Information	P value
BLAST match view associations BLAST with hdac6 hdac6 hdac6 histone deacetylase 6	gene_product from Danio rerio	3.7e-19
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Histone deacetylase 6	protein from Homo sapiens	3.9e-19
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Histone deacetylase 6	protein from Homo sapiens	4.1e-19
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Uncharacterized protein	protein from Sus scrofa	2.9e-18
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Uncharacterized protein	protein from Bos taurus	4.7e-18
BLAST match view associations BLAST with Hdac6 Hdac6 Hdac6 histone deacetylase 6	protein from Mus musculus	4.9e-18
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6 Uncharacterized protein	protein from Canis lupus familiaris	2.7e-17
BLAST match view associations BLAST with HDAC6 HDAC6 HDAC6	protein from Drosophila melanogaster	9.0e-17
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Protein HDA-6, isoform d	protein from Caenorhabditis elegans	2.3e-16
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Histone deacetylase 6	protein from Caenorhabditis elegans	7.9e-16
BLAST match view associations BLAST with hda-6 hda-6 hda-6	gene from Caenorhabditis elegans	7.9e-16
BLAST match view associations BLAST with hda-6 hda-6 hda-6 Protein HDA-6, isoform c	protein from Caenorhabditis elegans	7.9e-16
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Homo sapiens	6.8e-12
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Homo sapiens	6.8e-12
BLAST match view associations BLAST with sir2A sir2A sir2A UBP-type zinc finger-containing protein	gene from Dictyostelium discoideum	3.8e-10
BLAST match view associations BLAST with Usp44 Usp44 Usp44 ubiquitin specific peptidase 44	gene from Rattus norvegicus	1.3e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Homo sapiens	1.9e-09
BLAST match view associations BLAST with Usp44 Usp44 Usp44 ubiquitin specific peptidase 44	protein from Mus musculus	1.9e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	3.3e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Homo sapiens	3.4e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	3.4e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	4.3e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	5.2e-09
BLAST match view associations BLAST with usp44 usp44 usp44 ubiquitin specific peptidase 44	gene_product from Danio rerio	5.5e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	5.7e-09
BLAST match view associations BLAST with USP44 USP44 USP44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Ailuropoda melanoleuca	7.5e-09
BLAST match view associations BLAST with USP3 USP3 USP3 cDNA FLJ60902, highly similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)	protein from Homo sapiens	1.4e-08
BLAST match view associations BLAST with DDB_G0268872 DDB_G0268872 DDB_G0268872 putative ubiquitin carboxyl-terminal hydrolase (UCH)	gene from Dictyostelium discoideum	2.2e-08
BLAST match view associations BLAST with usp44 usp44 usp44 Ubiquitin carboxyl-terminal hydrolase 44	protein from Xenopus (Silurana) tropicalis	2.5e-08
BLAST match view associations BLAST with DDB_G0270200 DDB_G0270200 DDB_G0270200 BRCA1-associated protein	gene from Dictyostelium discoideum	2.7e-08
BLAST match view associations BLAST with usp44-b usp44-b usp44-b Ubiquitin carboxyl-terminal hydrolase 44-B	protein from Xenopus laevis	2.7e-08
BLAST match view associations BLAST with usp44-a usp44-a usp44-a Ubiquitin carboxyl-terminal hydrolase 44-A	protein from Xenopus laevis	2.7e-08
BLAST match view associations BLAST with usp49 usp49 usp49 ubiquitin specific peptidase 49	gene_product from Danio rerio	3.3e-08
BLAST match view associations BLAST with I3LRM6 I3LRM6 I3LRM6 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	4.0e-08
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	4.5e-08
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase	protein from Sus scrofa	4.6e-08
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	5.9e-08
BLAST match view associations BLAST with I3LCU7 I3LCU7 I3LCU7 Uncharacterized protein	protein from Sus scrofa	6.3e-08
BLAST match view associations BLAST with Usp49 Usp49 Usp49 ubiquitin specific peptidase 49	protein from Mus musculus	7.8e-08
BLAST match view associations BLAST with Usp49 Usp49 Usp49 ubiquitin specific peptidase 49	gene from Rattus norvegicus	1.0e-07
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase 49	protein from Homo sapiens	1.1e-07
BLAST match view associations BLAST with USP49 USP49 USP49 Ubiquitin carboxyl-terminal hydrolase 49	protein from Homo sapiens	1.3e-07
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Sus scrofa	3.0e-07
BLAST match view associations BLAST with Usp3 Usp3 Usp3 ubiquitin specific peptidase 3	gene from Rattus norvegicus	5.6e-07
BLAST match view associations BLAST with Usp3 Usp3 Usp3 ubiquitin specific peptidase 3	protein from Mus musculus	3.5e-06
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase	protein from Canis lupus familiaris	4.6e-06
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	4.6e-06
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	4.9e-06
BLAST match view associations BLAST with BRAP BRAP BRAP BRCA1-associated protein	protein from Homo sapiens	5.7e-06
BLAST match view associations BLAST with BRAP BRAP BRAP cDNA FLJ50182, highly similar to BRCA1-associated protein (EC 6.3.2.-)	protein from Homo sapiens	8.9e-06
BLAST match view associations BLAST with fbxl22 fbxl22 fbxl22 F-box and leucine-rich repeat protein 22	gene_product from Danio rerio	1.1e-05
BLAST match view associations BLAST with brap brap brap BRCA1 associated protein	gene_product from Danio rerio	1.2e-05
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	1.3e-05
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Gallus gallus	1.4e-05
BLAST match view associations BLAST with BRAP BRAP BRAP BRCA1-associated protein	protein from Homo sapiens	1.5e-05
BLAST match view associations BLAST with ETP1 ETP1 ETP1 Putative protein of unknown function required for growth on ethanol	gene from Saccharomyces cerevisiae	1.5e-05
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Gallus gallus	1.5e-05
BLAST match view associations BLAST with Brap Brap Brap BRCA1 associated protein	protein from Mus musculus	1.6e-05
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Bos taurus	1.6e-05
BLAST match view associations BLAST with BRAP BRAP BRAP Uncharacterized protein	protein from Canis lupus familiaris	1.6e-05
BLAST match view associations BLAST with BRAP BRAP BRAP BRCA1-associated protein	protein from Homo sapiens	1.6e-05
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase	protein from Bos taurus	1.7e-05
BLAST match view associations BLAST with CG5555 CG5555 CG5555	protein from Drosophila melanogaster	0.00011
BLAST match view associations BLAST with AT2G14830 AT2G14830 AT2G14830	protein from Arabidopsis thaliana	0.00019
BLAST match view associations BLAST with BRIZ1 BRIZ1 BRIZ1 AT2G42160	protein from Arabidopsis thaliana	0.00021
BLAST match view associations BLAST with usp-3 usp-3 usp-3	gene from Caenorhabditis elegans	0.00025
BLAST match view associations BLAST with BRIZ2 BRIZ2 BRIZ2 AT2G26000	protein from Arabidopsis thaliana	0.00028
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase	protein from Gallus gallus	0.00030
BLAST match view associations BLAST with USP3 USP3 USP3 Ubiquitin carboxyl-terminal hydrolase 3	protein from Homo sapiens	0.00037
BLAST match view associations BLAST with orf19.1576 orf19.1576 orf19.1576	gene_product from Candida albicans	0.00049
BLAST match view associations BLAST with EEED8.16 EEED8.16 EEED8.16	gene from Caenorhabditis elegans	0.00099