Query 023663
Match_columns 279
No_of_seqs 136 out of 1151
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 10:41:47 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023663.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023663hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hkm_A Anthranilate phosphorib 100.0 3.9E-76 1.3E-80 547.9 28.4 276 1-276 65-343 (346)
2 1khd_A Anthranilate phosphorib 100.0 6.7E-76 2.3E-80 545.2 29.7 269 1-270 72-343 (345)
3 1vqu_A Anthranilate phosphorib 100.0 2.4E-75 8.1E-80 546.4 33.1 273 1-273 86-373 (374)
4 2elc_A Trp D, anthranilate pho 100.0 1.4E-75 4.9E-80 540.1 29.7 268 1-273 59-328 (329)
5 3r88_A Anthranilate phosphorib 100.0 6.4E-75 2.2E-79 544.0 30.6 277 1-278 85-372 (377)
6 1o17_A Anthranilate PRT, anthr 100.0 2.2E-74 7.4E-79 535.0 27.7 271 1-275 62-333 (345)
7 3h5q_A PYNP, pyrimidine-nucleo 100.0 3.2E-51 1.1E-55 387.6 22.2 235 1-274 65-321 (436)
8 2dsj_A Pyrimidine-nucleoside ( 100.0 4.1E-50 1.4E-54 378.7 20.1 233 1-274 62-311 (423)
9 1brw_A PYNP, protein (pyrimidi 100.0 3.5E-49 1.2E-53 374.3 23.2 231 1-274 62-318 (433)
10 1uou_A Thymidine phosphorylase 100.0 7.8E-49 2.7E-53 374.6 24.4 231 1-274 89-346 (474)
11 2tpt_A Thymidine phosphorylase 100.0 1.4E-49 4.8E-54 377.7 15.1 242 1-274 63-322 (440)
12 4ex8_A ALNA; alpha/beta/alpha- 60.3 6.7 0.00023 35.0 3.6 123 17-149 105-261 (316)
13 4gim_A Pseudouridine-5'-phosph 54.5 23 0.0008 31.8 6.2 122 18-149 126-282 (335)
14 3cio_A ETK, tyrosine-protein k 40.5 22 0.00077 31.0 3.8 38 12-51 104-142 (299)
15 3lw7_A Adenylate kinase relate 40.0 70 0.0024 24.0 6.4 44 102-145 54-98 (179)
16 2woo_A ATPase GET3; tail-ancho 39.8 12 0.00039 33.3 1.8 29 17-47 24-52 (329)
17 3qgm_A P-nitrophenyl phosphata 38.9 24 0.00081 29.4 3.6 58 14-71 12-69 (268)
18 3bfv_A CAPA1, CAPB2, membrane 38.9 23 0.00079 30.4 3.6 37 13-51 83-120 (271)
19 3epr_A Hydrolase, haloacid deh 38.8 17 0.00059 30.4 2.7 58 14-71 9-66 (264)
20 1o51_A Hypothetical protein TM 38.5 32 0.0011 25.9 3.9 29 135-163 28-57 (114)
21 3end_A Light-independent proto 38.2 14 0.00046 32.1 2.0 36 13-50 42-77 (307)
22 3iqw_A Tail-anchored protein t 37.5 19 0.00063 32.3 2.9 46 14-64 18-63 (334)
23 2l48_A N-acetylmuramoyl-L-alan 36.9 65 0.0022 23.0 5.0 37 126-162 19-55 (85)
24 3zq6_A Putative arsenical pump 36.2 13 0.00046 32.7 1.7 37 14-52 16-52 (324)
25 3ug7_A Arsenical pump-driving 35.8 15 0.0005 33.0 1.9 35 15-51 29-63 (349)
26 1ihu_A Arsenical pump-driving 35.8 15 0.0005 35.3 2.0 37 13-51 9-45 (589)
27 3fwy_A Light-independent proto 34.0 15 0.00052 32.5 1.7 37 13-51 49-85 (314)
28 1vli_A Spore coat polysacchari 33.8 1.3E+02 0.0045 27.5 7.9 143 17-162 32-197 (385)
29 3kjh_A CO dehydrogenase/acetyl 33.6 9.8 0.00034 31.3 0.3 32 17-50 5-36 (254)
30 1vkm_A Conserved hypothetical 33.4 33 0.0011 30.3 3.6 116 17-158 98-226 (297)
31 3fkq_A NTRC-like two-domain pr 33.3 32 0.0011 30.8 3.8 37 13-51 144-181 (373)
32 1byi_A Dethiobiotin synthase; 32.8 17 0.00059 29.5 1.7 29 17-47 6-35 (224)
33 1cp2_A CP2, nitrogenase iron p 31.3 19 0.00065 30.2 1.8 32 17-50 6-37 (269)
34 2woj_A ATPase GET3; tail-ancho 30.9 18 0.00061 32.6 1.6 34 17-52 23-58 (354)
35 3io3_A DEHA2D07832P; chaperone 29.3 32 0.0011 30.9 3.0 46 13-63 19-66 (348)
36 3kc2_A Uncharacterized protein 29.0 46 0.0016 29.9 4.0 59 13-71 16-75 (352)
37 2ho4_A Haloacid dehalogenase-l 28.9 75 0.0026 25.7 5.1 58 14-71 11-68 (259)
38 1zjj_A Hypothetical protein PH 28.3 38 0.0013 28.2 3.2 57 14-70 5-61 (263)
39 3ovg_A Amidohydrolase; structu 28.0 53 0.0018 29.7 4.3 72 13-86 152-235 (363)
40 2afh_E Nitrogenase iron protei 27.1 24 0.00082 30.1 1.7 30 17-48 7-36 (289)
41 3pf6_A Hypothetical protein PP 26.5 57 0.0019 21.1 2.9 34 242-275 19-52 (62)
42 2px0_A Flagellar biosynthesis 26.1 2.7E+02 0.0091 23.9 8.4 83 12-98 105-197 (296)
43 2ej7_A HCG3 gene; HCG3 protein 26.1 43 0.0015 22.9 2.6 36 56-97 5-40 (82)
44 3gtx_A Organophosphorus hydrol 25.4 1.8E+02 0.0061 25.7 7.3 68 14-83 157-236 (339)
45 2gdt_A Leader protein; P65 hom 25.1 32 0.0011 25.6 1.8 22 239-260 18-39 (116)
46 4dzz_A Plasmid partitioning pr 24.9 28 0.00095 27.6 1.6 31 19-51 9-39 (206)
47 2dcl_A Hypothetical UPF0166 pr 24.8 77 0.0026 24.2 4.0 29 135-163 24-53 (127)
48 3pdw_A Uncharacterized hydrola 24.8 35 0.0012 28.3 2.3 58 14-71 10-67 (266)
49 1vjr_A 4-nitrophenylphosphatas 24.6 65 0.0022 26.5 4.0 58 13-70 20-77 (271)
50 1yv9_A Hydrolase, haloacid deh 24.6 78 0.0027 26.0 4.5 57 14-70 9-66 (264)
51 2ph1_A Nucleotide-binding prot 22.9 33 0.0011 28.8 1.8 35 14-50 20-55 (262)
52 3q9l_A Septum site-determining 22.4 35 0.0012 28.2 1.8 30 19-50 10-39 (260)
53 1j3m_A The conserved hypotheti 22.1 97 0.0033 23.2 4.2 62 70-150 12-73 (129)
54 4a7p_A UDP-glucose dehydrogena 22.0 4.6E+02 0.016 24.0 11.0 135 15-166 11-165 (446)
55 2hx1_A Predicted sugar phospha 21.7 71 0.0024 26.7 3.7 56 14-69 18-73 (284)
56 1g5t_A COB(I)alamin adenosyltr 21.1 68 0.0023 26.4 3.3 47 23-71 39-85 (196)
57 1g3q_A MIND ATPase, cell divis 20.8 40 0.0014 27.4 1.8 30 19-50 10-39 (237)
58 3la6_A Tyrosine-protein kinase 20.5 42 0.0014 29.0 2.0 38 13-52 93-131 (286)
59 3ocu_A Lipoprotein E; hydrolas 20.5 83 0.0028 27.1 3.8 33 38-70 113-146 (262)
60 1hyq_A MIND, cell division inh 20.4 44 0.0015 27.7 2.0 30 18-49 9-38 (263)
61 2oze_A ORF delta'; para, walke 20.4 45 0.0015 28.4 2.1 33 13-47 35-70 (298)
62 3igf_A ALL4481 protein; two-do 20.2 20 0.00068 32.7 -0.3 32 17-50 7-38 (374)
63 3pnz_A Phosphotriesterase fami 20.2 1.9E+02 0.0065 25.5 6.3 74 14-91 152-237 (330)
64 3ea0_A ATPase, para family; al 20.1 40 0.0014 27.5 1.7 31 19-51 12-43 (245)
No 1
>4hkm_A Anthranilate phosphoribosyltransferase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; HET: MSE CXS; 1.95A {Xanthomonas campestris PV}
Probab=100.00 E-value=3.9e-76 Score=547.93 Aligned_cols=276 Identities=43% Similarity=0.650 Sum_probs=243.3
Q ss_pred CccccccccC--CCCcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCCCCCHHHHH
Q 023663 1 MIKYATKVEG--LGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVR 78 (279)
Q Consensus 1 ~~~~~~~~~~--~~~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~~~s~~~~~ 78 (279)
|++++.+++. ...++|+|||||||++||||||++|+++|++|+||+|||||++++++||+|+||+||++++++++++.
T Consensus 65 m~~~~~~v~~~~~~~~vD~~gTGGdg~~t~niSt~~a~v~Aa~G~~V~khG~r~~ss~~GsaD~LeaLG~~~~ls~~~~~ 144 (346)
T 4hkm_A 65 MREFSRRVEVTDRRHMVDIVGTGGDGSHTFNISTCAMFVAAAGGAKVAKHGNRSVSSKSGSADALEALGAVIELQPEQVA 144 (346)
T ss_dssp HHHHSCCCCCSCCTTEEEEECC------CCCHHHHHHHHHHHTTCEEEEEC---------CHHHHHTTTCCCCCCHHHHH
T ss_pred HHHhCCCCCCCCCccceeecCCCCCCccccCcHHHHHHHHHhcCCCeeecCCCCCCCCcCHHHHHHHcCCCcccCHHHHH
Confidence 5677777754 34689999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhcCeEEEeCCccChhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHcCCCeEEEEe
Q 023663 79 RCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH 158 (279)
Q Consensus 79 ~~l~~~g~~fl~~~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~lG~~~alvv~ 158 (279)
+++++.||+|+++|.|||+|++++++|++||+||+||+++||+||++++++++|||||+|.++|+++++.+|.++++|||
T Consensus 145 ~~l~~~g~~fl~a~~~~Pa~k~l~~~R~~lg~rT~fn~lgpL~nPa~~~~~v~Gv~~~~~~~~~a~~l~~lg~~~a~vv~ 224 (346)
T 4hkm_A 145 ASLAQTGIGFMYAPVHHPAMKVVAPVRREMGVRTIFNILGPLTNPAGSPNILMGVFHPDLVGIQARVLQELGAERALVVW 224 (346)
T ss_dssp HHHHHHSEEEECHHHHCGGGGGTHHHHHHHCSCCTHHHHGGGCCTTCCSEEEEECSSTHHHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHhcCcchhchhhhChhHHHHhhheeccCCCchhhhcccccCCCCCcceEeeccCHHHhHHHHHHHHHcCCCeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHHHhCCCCchHHHHHHHHHHHHHH
Q 023663 159 S-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALILNAAAALL 237 (279)
Q Consensus 159 G-eG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~vL~G~~~~~~~~v~~naa~~L~ 237 (279)
| ||+||+++.++|.|+++++|++.++.++|+|||++..+++++.+++++++++.++++|+|+.++++|+|++|||++||
T Consensus 225 g~~G~dEis~~~~t~v~~~~~g~i~~~~i~P~d~Gl~~~~~~~~~~g~~~e~a~~~~~vl~g~~~~~~d~v~lnaa~~L~ 304 (346)
T 4hkm_A 225 GRDGMDELSLGAGTLVGELRDGQVHEYEVHPEDFGIAMSASRNLKVADAAESRAMLLQVLDNVPGPALDIVALNAGAALY 304 (346)
T ss_dssp ETTTBSSCCSSSCEEEEEEETTEEEEEEECGGGGTCCCCC---------CCHHHHHHHHHTTCCSHHHHHHHHHHHHHHH
T ss_pred cCCCchhhhhccCceEEEEeCCceeEecCCHHHcCCccCcccccCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
Confidence 9 999999999999999999999999999999999999888888889999999999999999988999999999999999
Q ss_pred HcccCCCHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhc
Q 023663 238 VSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHLL 276 (279)
Q Consensus 238 ~~g~~~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~~~~ 276 (279)
++|+++|++||+++|+++|+||+|+++|++|++.++++.
T Consensus 305 ~~g~a~sl~eg~~~A~~~l~sG~A~~~l~~~i~~s~~~~ 343 (346)
T 4hkm_A 305 VAGVADSIADGIVRARQVLADGSARACLDAYVAFTQQAT 343 (346)
T ss_dssp HTTSSSSHHHHHHHHHHHHHTSHHHHHHHHHHHHHHHHT
T ss_pred HcCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999998764
No 2
>1khd_A Anthranilate phosphoribosyltransferase; type 3 PRT fold, nucleotide binding fold; 1.86A {Pectobacterium carotovorum} SCOP: a.46.2.1 c.27.1.1 PDB: 1kgz_A
Probab=100.00 E-value=6.7e-76 Score=545.16 Aligned_cols=269 Identities=39% Similarity=0.666 Sum_probs=251.3
Q ss_pred CccccccccCC-CCcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCC-cccHHHHHHHcCCCCCCCHHHHH
Q 023663 1 MIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSS-ACGSADVLEALGVVIDLDPEGVR 78 (279)
Q Consensus 1 ~~~~~~~~~~~-~~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~-~~Gs~dvLe~LGi~~~~s~~~~~ 78 (279)
|++++.+++.+ ..++|+|||||||++||||||++|+++|++|+||+|||||++++ ++||+|+||+||++++++++++.
T Consensus 72 m~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VakHGnr~~ss~~~GsaDvLeaLGv~~~~~~~~~~ 151 (345)
T 1khd_A 72 LLADAQPFPRPDYDFADIVGTGGDGTNSINISTASAFVAASCGAKVAKHGNRSVCQPLAGSCDLLQAFGIRLDMSAEDSR 151 (345)
T ss_dssp HHHTSCCCCCCSSCCEEEEECCCCSSCBCCCHHHHHHHHHHHTCCEEEEECC---------CHHHHHTTCCTTCCHHHHH
T ss_pred HHHhCCcCCCCCCCeeeecCCCCCCCCccchHHHHHHHHHhCCCcEEEeCCCCCCCCcccHHHHHHhCCCCCCCCHHHHH
Confidence 56777777543 35899999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHhcCeEEEeCCccChhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHcCCCeEEEEe
Q 023663 79 RCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH 158 (279)
Q Consensus 79 ~~l~~~g~~fl~~~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~lG~~~alvv~ 158 (279)
++|++.||+|+++|.|||+|++++++|++||+||+||++|||+||++++++|+|||||+|.+.|+++++.+|.++++||+
T Consensus 152 ~~l~~~gi~fl~a~~~hPa~k~l~~~R~~Lg~rTvfn~lgpL~nPa~~~~~v~GV~~~~~~~~~a~~l~~lG~~~a~vv~ 231 (345)
T 1khd_A 152 QALDDLNVCFLFAPQYHTGFRHAMPVRQQLKTRTIFNVLGPLINPARPPKALIGVYSPELVLPIAQALKVLGYKNAAVVH 231 (345)
T ss_dssp HHHHHHSEEEEEHHHHCGGGGGGHHHHHHHCSCCTHHHHGGGCCTTCCSEEEEECSSGGGHHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHCCEEEEehhhhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCcCCCeEEEeecCHHHHHHHHHHHHHhCCCeEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHHHhCCCCc-hHHHHHHHHHHHHHH
Q 023663 159 SEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERG-AIADALILNAAAALL 237 (279)
Q Consensus 159 GeG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~vL~G~~~-~~~~~v~~naa~~L~ 237 (279)
|||+||+|+.++|+|+++++|+++++.|+|++||++..+.+++.+++++++++.++++|+|+.+ +++|+|++|||.+||
T Consensus 232 GdG~dEis~~~~t~v~~~~~g~i~~~~i~p~~~G~~~~~~~~l~~g~~~e~a~~~~~vL~G~~~~~~~d~v~~naa~~L~ 311 (345)
T 1khd_A 232 GGGMDEVAIHTPTQVAELNNGEIESYQLSPQDFGLQSYSLNALQGGTPEENRDILARLLQGKGDAAHARQVAANVALLLK 311 (345)
T ss_dssp ETTBSSCCSSSCEEEEEEETTEEEEEEECGGGGTCCCBCGGGGBCCSHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHH
T ss_pred CCCcceecCCCceEEEEEeCCEEEEEEECHHHcCCCcCCccccCCCCHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999888999999999999999999999965 899999999999999
Q ss_pred HcccCCCHHHHHHHHHHHHHccHHHHHHHHHHH
Q 023663 238 VSCKVNTLAEGVALAREIQLSGKALNTLDLWIE 270 (279)
Q Consensus 238 ~~g~~~~~~eg~~~A~~~l~sG~a~~~l~~~~~ 270 (279)
++|+ +|++||+++|+++|+||+|+++|++|++
T Consensus 312 ~~g~-~~~~eg~~~A~~~i~sG~A~~~l~~~~~ 343 (345)
T 1khd_A 312 LFGQ-DNLRHNAQLALETIRSGTAFERVTALAA 343 (345)
T ss_dssp TTTC-CCHHHHHHHHHHHHHHTHHHHHHHHHHT
T ss_pred HcCC-CCHHHHHHHHHHHHHCCHHHHHHHHHHh
Confidence 9999 9999999999999999999999999975
No 3
>1vqu_A Anthranilate phosphoribosyltransferase 2; 17130499, structur genomics, joint center for structural genomics, JCSG, prote structure initiative, PSI; 1.85A {Nostoc SP}
Probab=100.00 E-value=2.4e-75 Score=546.38 Aligned_cols=273 Identities=38% Similarity=0.565 Sum_probs=255.1
Q ss_pred Cccccccc--------cCC---CCcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCC
Q 023663 1 MIKYATKV--------EGL---GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVV 69 (279)
Q Consensus 1 ~~~~~~~~--------~~~---~~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~ 69 (279)
|++++.++ +.+ ..++|+|||||||.+||||||++|+++|++|+||+|||||++++++||+|+||+||++
T Consensus 86 m~~~~~~~~~~~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~Gv~VaKHGnR~~ss~~GsaDvLEaLGv~ 165 (374)
T 1vqu_A 86 LQSQSKMGTGENYSQLPITNSPFSIIDTCGTGGDGSSTFNISTAVAFVAAAYGVPVAKHGNRSASSLTGSADVLEALGVN 165 (374)
T ss_dssp HHTTCCC-----------CCSSSCCEEEEECC---CCBCCHHHHHHHHHHHTTCCEEEEEECC--CTTCHHHHHHHTTCC
T ss_pred HHHhCCccccccccccCccccCCCeeEEeCCCCCCCCccchHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHhCCCC
Confidence 45666666 332 3589999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhcCeEEEeCCccChhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHc
Q 023663 70 IDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRF 149 (279)
Q Consensus 70 ~~~s~~~~~~~l~~~g~~fl~~~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~l 149 (279)
++++++++.++|++.||+|+++|.|||+|++++++|++||+||+||++|||+||+++++||+|||||+|.++|+++++.+
T Consensus 166 ~~~~~e~~~~~l~~~gi~fl~a~~~hPa~k~l~~~R~~lg~rTvfNilgpL~NPa~~~~qv~GV~~~~~~~~~a~~l~~l 245 (374)
T 1vqu_A 166 LGASPEKVQAALQEVGITFLFAPGWHPALKAVATLRRTLRIRTVFNLLGPLVNPLRPTGQVVGLFTPKLLTTVAQALDNL 245 (374)
T ss_dssp TTCCHHHHHHHHHHTSEEEEEETTSSGGGGGGHHHHHHHCSCCHHHHHGGGCCTTCCSEEEEECSCGGGHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHCCEEEEEhHHhCHHHHHHHHHHHHhCCCCHHHHHHHhcCCCCCCceEEeecCHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCeEEEEec-CCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHHHhCCCCchHHH-H
Q 023663 150 GLKRALVVHS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIAD-A 227 (279)
Q Consensus 150 G~~~alvv~G-eG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~vL~G~~~~~~~-~ 227 (279)
|.++++||+| +|+||+++.++|+|+++++|++.++.++|+|||++..+++++.++++++++++++++|+|+.++++| +
T Consensus 246 G~~~alVv~G~~G~dE~s~~~~t~v~~~~~g~~~~~~i~p~d~Gl~~~~~~~l~~g~~~e~a~~~~~vL~G~~~~~~d~~ 325 (374)
T 1vqu_A 246 GKQKAIVLHGRERLDEAGLGDLTDLAVLSDGELQLTTINPQEVGVTPAPIGALRGGDVQENAEILKAVLQGKGTQAQQDA 325 (374)
T ss_dssp TCSEEEEEEETTTBSSCCSSSCEEEEEEETTEEEEEEECGGGGTCCCCCGGGGBCCSHHHHHHHHHHHHTTCSCHHHHHH
T ss_pred CCCeEEEEECCCCccccccCCceEEEEEeCCEEEEEEECHHHCCCccccccccCCCCHHHHHHHHHHHHCCCCCchHHHH
Confidence 9999999999 9999999999999999999999999999999999888888888899999999999999998778899 9
Q ss_pred HHHHHHHHHHHcccCC--CHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Q 023663 228 LILNAAAALLVSCKVN--TLAEGVALAREIQLSGKALNTLDLWIEVSK 273 (279)
Q Consensus 228 v~~naa~~L~~~g~~~--~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~ 273 (279)
|++|||.+||++|+++ |++||+++|+++|+||+|+++|++|++.++
T Consensus 326 v~~naa~~L~~~g~~~~~~~~eg~~~A~~~i~sG~A~~~l~~~v~~~~ 373 (374)
T 1vqu_A 326 VALNAALALQVAGAVPLLDHAQGVSVAKEILQTGTAWAKLAQLVYFLG 373 (374)
T ss_dssp HHHHHHHHHHHHTSSCTTCHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 9999999999999999 999999999999999999999999998875
No 4
>2elc_A Trp D, anthranilate phosphoribosyltransferase; structural genomics, NPPSFA, national project O structural and functional analyses; 1.55A {Thermus thermophilus} SCOP: a.46.2.1 c.27.1.1 PDB: 1v8g_A
Probab=100.00 E-value=1.4e-75 Score=540.05 Aligned_cols=268 Identities=46% Similarity=0.735 Sum_probs=256.9
Q ss_pred CccccccccCC-CCcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCCCCCHHHHHH
Q 023663 1 MIKYATKVEGL-GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRR 79 (279)
Q Consensus 1 ~~~~~~~~~~~-~~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~~~s~~~~~~ 79 (279)
|++++.+++.+ ..++|+|||||||.+||||||++|+++|++|+||+|||||++++++||+|+||+||++++++++++.+
T Consensus 59 m~~~~~~~~~~~~~~vD~~gTGGdg~~tfNiSt~~a~v~Aa~Gv~V~kHGnr~~ss~~GsaDvLeaLG~~~~~~~~~~~~ 138 (329)
T 2elc_A 59 MREAARPLRVHRRPLLDIVGTGGDGKGLMNLSTLAALVAAAGGVAVAKHGNRAASSRAGSADLLEALGVDLEAPPERVGE 138 (329)
T ss_dssp HHHHSCCCCCCCSSEEEEEECCCCSSCCCCCHHHHHHHHHHTTCEEEEEECCCTTTTCSHHHHHHHTTCCTTCCHHHHHH
T ss_pred HHHhCCCCCCCCCCeeEEcCCCCCCCCccccHHHHHHHHHhCCCCEEEeCCCCCCCcccHHHHHHhCCCCCCCCHHHHHH
Confidence 56777777553 45899999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhcCeEEEeCCccChhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHcCCCeEEEEec
Q 023663 80 CVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS 159 (279)
Q Consensus 80 ~l~~~g~~fl~~~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~lG~~~alvv~G 159 (279)
++++.||+|+++|.|||+|++++++|++||+||+||++|||+||+++++||+|||||+|.++|+++++.+| ++++||||
T Consensus 139 ~l~~~g~~fl~a~~~hPa~k~~~~~R~~lg~rTvfn~lgpL~nPa~~~~~v~Gv~~~~~~~~~a~~l~~lG-~~alVv~G 217 (329)
T 2elc_A 139 AIEELGFGFLFARVFHPAMRHVAPVRAELGVRTVFNLLGPLTNPAGADAYVLGVFSPEWLAPMAEALERLG-ARGLVVHG 217 (329)
T ss_dssp HHHHHSEEEEEHHHHCGGGGGTHHHHHHHCSCCHHHHHTTTCCTTCCCEEEEECSSGGGHHHHHHHHHHTT-CEEEEEEE
T ss_pred HHHHCCEEEEEhHHhCHHHHHHHHHHHHhCCCCHHHHHHHhcCccCCceeEEeeeCHHHHHHHHHHHHHcC-CCEEEEeC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred CCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHHHhCCCC-chHHHHHHHHHHHHHHH
Q 023663 160 EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGER-GAIADALILNAAAALLV 238 (279)
Q Consensus 160 eG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~vL~G~~-~~~~~~v~~naa~~L~~ 238 (279)
+|+||++ .++|+|+++++|+ +.++|+|||++..+++++.+++++++++.++++|+|+. ++++|+|++|||.+||+
T Consensus 218 ~G~dE~~-~~~t~v~~~~~g~---~~i~p~~~G~~~~~~~~l~~g~~~e~a~~~~~vL~G~~~~~~~d~v~~naa~~L~~ 293 (329)
T 2elc_A 218 EGADELV-LGENRVVEVGKGA---YALTPEEVGLKRAPLEALKGGGPEENAALARRLLKGEEKGPLADAVALAAGAGFYA 293 (329)
T ss_dssp TTBSSCC-SSCEEEEETTTEE---EEECGGGGTCCCCCGGGGCCCSHHHHHHHHHHHHTTCCCSHHHHHHHHHHHHHHHH
T ss_pred CChhhhc-cCCeEEEEEECCE---EEECHHHcCCccCCcccCCCCCHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHH
Confidence 9999999 9999999988776 88999999999888888888999999999999999986 78899999999999999
Q ss_pred cccCCCHHHHHHHHHHHHHccHHHHHHHHHHHHhh
Q 023663 239 SCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSK 273 (279)
Q Consensus 239 ~g~~~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~ 273 (279)
+|+++|++||+++|+++|+||+|+++|++|++.++
T Consensus 294 ~g~~~~~~~g~~~A~~~i~sG~A~~~l~~~~~~~~ 328 (329)
T 2elc_A 294 AGKTPSLKEGVALAREVLASGEAYLLLERYVAFLR 328 (329)
T ss_dssp TTSSSSHHHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999876
No 5
>3r88_A Anthranilate phosphoribosyltransferase; anthranilic acids, M tryptophan, inhibitor, magnesium binding phosp pyrophosphate; HET: PRP 14F; 1.73A {Mycobacterium tuberculosis} PDB: 3qqs_A 3qs8_A* 3qsa_A* 3qr9_A* 3r6c_A* 3twp_A* 1zvw_A* 2bpq_A
Probab=100.00 E-value=6.4e-75 Score=544.00 Aligned_cols=277 Identities=40% Similarity=0.665 Sum_probs=262.5
Q ss_pred CccccccccCC---CCcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCCCCCHHHH
Q 023663 1 MIKYATKVEGL---GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGV 77 (279)
Q Consensus 1 ~~~~~~~~~~~---~~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~~~s~~~~ 77 (279)
|++++.+++.+ ..++|+|||||||++||||||++|+++|++|+||+|||||++++++||+|+||+||++++++++++
T Consensus 85 m~~~~~~v~~~~~~~~~vD~~gTGGdg~~T~niSt~~A~v~Aa~Gv~VaKHGnR~~ss~~GsaDvLEaLGv~~~l~~e~~ 164 (377)
T 3r88_A 85 MLSHAHPLPADTVPDDAVDVVGTGGDGVNTVNLSTMAAIVVAAAGVPVVKHGNRAASSLSGGADTLEALGVRIDLGPDLV 164 (377)
T ss_dssp HHHHSCCCCTTCSCTTCEEEEECCCCSCCBCCHHHHHHHHHHHTTCCEEEEECCCSSSSCCHHHHHHHTTCCCCCCHHHH
T ss_pred HHHhCCcCCCccCCCCCeEEeCCCCCCcCccccHHHHHHHHHhcCCeEEeECCCCCCCcccHHHHHHHcCCCcccchHHH
Confidence 56777777542 468999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhcCeEEEeCCccChhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHcCCCeEEEE
Q 023663 78 RRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVV 157 (279)
Q Consensus 78 ~~~l~~~g~~fl~~~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~lG~~~alvv 157 (279)
.+++++.||+|+++|.|||+|++++++|++||+||+||+++||+||++++++++|||||+|.++|+++++.+| ++++||
T Consensus 165 ~~~l~~~gi~fl~a~~~hPa~k~l~~vR~~Lg~rTifN~lgpL~NPa~~~~~liGv~~~~l~~~~a~~l~~~~-~~a~vv 243 (377)
T 3r88_A 165 ARSLAEVGIGFCFAPRFHPSYRHAAAVRREIGVPTVFNLLGPLTNPARPRAGLIGCAFADLAEVMAGVFAARR-SSVLVV 243 (377)
T ss_dssp HHHHHHHSEEEEEHHHHCGGGHHHHHHHHHHCSCCGGGGHHHHCCTTCCSEEEEECSCTTTHHHHHHHHHHTT-CEEEEE
T ss_pred HHHHHHhccccccchhhCHHHHHHHHHHHHhccCchhhhHHHhcCcccccccccCCCCHHHhHHHHHHHHhcC-CeeEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999998 589999
Q ss_pred ec-CCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHHHhCCCCchHHHHHHHHHHHHH
Q 023663 158 HS-EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALILNAAAAL 236 (279)
Q Consensus 158 ~G-eG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~vL~G~~~~~~~~v~~naa~~L 236 (279)
+| ||+||+++.++|.|+++++|+++++.++|+|||++..+++++.++++++|++.++++|+|+.++++|.|++|+|.+|
T Consensus 244 ~G~dGlDEis~~~~t~v~~~~~g~i~~~~i~P~d~Gl~~~~~~~l~gg~~~ena~~~~~vL~G~~~~~~d~v~lNaa~~l 323 (377)
T 3r88_A 244 HGDDGLDELTTTTTSTIWRVAAGSVDKLTFDPAGFGFARAQLDQLAGGDAQANAAAVRAVLGGARGPVRDAVVLNAAGAI 323 (377)
T ss_dssp EETTSCSSCCSSSCEEEEEEETTEEEEEEECGGGGTCCCCCGGGGBCCSHHHHHHHHHHHHTTCCSHHHHHHHHHHHHHH
T ss_pred cCCCCCceeecccccceEEEeeceeEEEeccccccCCCcCCHHhccCCCHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHH
Confidence 99 99999999999999999999999999999999999999999999999999999999999998899999999999999
Q ss_pred HHcccC-------CCHHHHHHHHHHHHHccHHHHHHHHHHHHhhhhccc
Q 023663 237 LVSCKV-------NTLAEGVALAREIQLSGKALNTLDLWIEVSKHLLVH 278 (279)
Q Consensus 237 ~~~g~~-------~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~~~~~~ 278 (279)
|+.|.. +|++||+++|+++|+||+|+++|++|+++++++.-|
T Consensus 324 ~~~g~~~~~~~~~~sl~eG~~~A~e~l~sG~A~~kl~~~i~~s~~~~e~ 372 (377)
T 3r88_A 324 VAHAGLSSRAEWLPAWEEGLRRASAAIDTGAAEQLLARWVRFGRQILEH 372 (377)
T ss_dssp HHHHTTC--CCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHHTC---
T ss_pred HHhcCccccccccCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhh
Confidence 987654 479999999999999999999999999999998766
No 6
>1o17_A Anthranilate PRT, anthranilate phosphoribosyltransferase, TRPD; nucleoside-phosphorylases; 2.05A {Sulfolobus solfataricus} SCOP: a.46.2.1 c.27.1.1 PDB: 1gxb_A 1zxy_A* 1zyk_A* 2gvq_A* 3gbr_A*
Probab=100.00 E-value=2.2e-74 Score=535.02 Aligned_cols=271 Identities=34% Similarity=0.552 Sum_probs=257.2
Q ss_pred CccccccccCCCCcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCCCCCHHHHHHH
Q 023663 1 MIKYATKVEGLGDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVIDLDPEGVRRC 80 (279)
Q Consensus 1 ~~~~~~~~~~~~~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~~~s~~~~~~~ 80 (279)
|++++.+++.+ .++|+|||||||.+||||||++|+++|++ +||+|||||+++|++||+|+||+||++++++++++.++
T Consensus 62 m~~~~~~~~~~-~~vD~~gTGGdg~~tfNiSt~~A~v~Aa~-v~VaKHGnR~~ss~~GsaDvLEaLGv~~~~~~e~~~~~ 139 (345)
T 1o17_A 62 MRELAIKIDVP-NAIDTAGTGGDGLGTVNVSTASAILLSLV-NPVAKHGNRAVSGKSGSADVLEALGYNIIVPPERAKEL 139 (345)
T ss_dssp HHHHSCCCCCT-TCEECCC----CCCBCCHHHHHHHHHTTT-SCEEEEECCCSSSSCSHHHHHHHHTBCCCCCHHHHHHH
T ss_pred HHHhCCCCCCC-CceeeCCCCCCCCCccchHHHHHHHHHHc-CCEEEECCCCCCCcccHHHHHHhCCCCCCCCHHHHHHH
Confidence 46777776544 68999999999999999999999999999 99999999999999999999999999999999999999
Q ss_pred HHhcCeEEEeCCccChhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHcCCCeEEEEec-
Q 023663 81 VDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVHS- 159 (279)
Q Consensus 81 l~~~g~~fl~~~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~lG~~~alvv~G- 159 (279)
+++.||+|+++|.|||+|++++++|++||+||+||++|||+||+++++||+|||||.|.++++++++.+|.++++||+|
T Consensus 140 l~~~gi~fl~a~~~hPa~k~l~~~R~~lg~rTvfN~lgpL~nPa~~~~ql~Gv~~~~~~~~~A~~l~~lG~~~alVv~G~ 219 (345)
T 1o17_A 140 VNKTNFVFLFAQYYHPAMKNVANVRKTLGIRTIFNILGPLTNPANAKYQLMGVFSKDHLDLLSKSAYELDFNKIILVYGE 219 (345)
T ss_dssp HHHHSEEEEEHHHHCGGGGGTHHHHHHHCSCCGGGGCGGGCCTTCCSEEEEECSSHHHHHHHHHHHTTSCCSEEEEEEET
T ss_pred HHHcCEEEEehHHhChHHHHHHHHHHHhCCCCHHHHHHHhcCccCCCeEEEEeeCHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHc
Q 023663 160 EGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGERGAIADALILNAAAALLVS 239 (279)
Q Consensus 160 eG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~vL~G~~~~~~~~v~~naa~~L~~~ 239 (279)
+|+||+++.++|.|+++++|++.++.|+|+|||++..+++++.+++++++++.++++|+|+.++++|+|++|||.+||++
T Consensus 220 ~G~dE~s~~~~t~v~~~~~g~~~~~~i~p~d~Gl~~~~~~~l~~g~~~e~a~~~~~vL~G~~~~~~d~v~~naa~~L~~~ 299 (345)
T 1o17_A 220 PGIDEVSPIGNTFMKIVSKRGIEEVKLNVTDFGISPIPIEKLIVNSAEDSAIKIVRAFLGKDEHVAEFIKINTAVALFAL 299 (345)
T ss_dssp TTBSSCCSSSEEEEEEEETTEEEEEEEEGGGGTCCCCCGGGTBCSSHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHHHHT
T ss_pred CCHHHhcccCCcEEEEEeCCeEEEEEEChhhcCCCCCChhccCCCCHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHc
Confidence 99999999999999999999999999999999999888888888999999999999999987788999999999999999
Q ss_pred ccCCCHHHHHHHHHHHHHccHHHHHHHHHHHHhhhh
Q 023663 240 CKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 275 (279)
Q Consensus 240 g~~~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~~~ 275 (279)
|+++|++||+++|+++|+ +|+++|++|++.++.+
T Consensus 300 g~~~~~~eg~~~A~~~i~--~A~~~l~~~~~~~~~~ 333 (345)
T 1o17_A 300 DRVGDFREGYEYADHLIE--KSLDKLNEIISMNGDV 333 (345)
T ss_dssp TSSSSHHHHHHHHHHHHT--THHHHHHHHHHHSBCH
T ss_pred CCCCCHHHHHHHHHHHHH--HHHHHHHHHHHHhCCc
Confidence 999999999999999999 9999999999998864
No 7
>3h5q_A PYNP, pyrimidine-nucleoside phosphorylase; structural genomics, glycosyltransferase, transferase; HET: MSE THM; 1.94A {Staphylococcus aureus}
Probab=100.00 E-value=3.2e-51 Score=387.60 Aligned_cols=235 Identities=26% Similarity=0.305 Sum_probs=216.9
Q ss_pred CccccccccCC---CCcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHc-CCCCCCCHHH
Q 023663 1 MIKYATKVEGL---GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDPEG 76 (279)
Q Consensus 1 ~~~~~~~~~~~---~~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~L-Gi~~~~s~~~ 76 (279)
|++++.+++.+ ..++|+|||||||.+| ||++|+++|++|+||+|||||++++++||+|+||+| ||++++++++
T Consensus 65 m~~~~~~~~~~~~~~~~vD~~gTGGdG~~t---St~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaLpGi~~~ls~e~ 141 (436)
T 3h5q_A 65 MVNSGDMIDLSDIKGVKVDKHSTGGVGDTT---TLVLAPLVAAVDVPVAKMSGRGLGHTGGTIDKLEAIDGFHVEIDEAT 141 (436)
T ss_dssp HHTTSCCCCCTTSCSCCEEEEECCCTTCCH---HHHHHHHHHHTTCCEEEECCCCSSSSCCHHHHHTTSTTCCCCCCHHH
T ss_pred HHHhCCcCCccccCCCceeecCCCCCCCCh---HHHHHHHHHhCCCCEEeECCCCCCCcccHHHHHHhCcCCCCCCCHHH
Confidence 56677766443 3689999999999987 999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHhcCeEEEe-CCccChhhhchHHHHhhhCCCChhhhhhhccC--------CCCCCceEEEee--------ChhhH
Q 023663 77 VRRCVDEAGIGFMM-STKYHPAMKFVRPVRKKLKVKTVFNILGPMLN--------PACVPFAVVGVY--------NENLV 139 (279)
Q Consensus 77 ~~~~l~~~g~~fl~-~~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlN--------P~~~~~~v~Gv~--------h~~~~ 139 (279)
+.++|++.||+|++ +|.|||+|++++++|++ +||+||+ ||+| |++++++|+||+ +++..
T Consensus 142 ~~~~l~~~g~~fl~~a~~~~Pa~~~l~~lR~~--~~Tvfni--PLinaSimSKKlpag~~~~vlgV~~G~gaf~~~~~~a 217 (436)
T 3h5q_A 142 FVKLVNENKVAVVGQSGNLTPADKKLYALRDV--TGTVNSI--PLIASSIMSKKIAAGADAIVLDVKTGSGAFMKTLEDA 217 (436)
T ss_dssp HHHHHHHHSEEEECCCSSSCHHHHHHHHHHHT--TTCSSCH--HHHHHHHHHHHHHTTCSEEEEEEEESTTSSBCSHHHH
T ss_pred HHHHHHHcCCEEEccccccCHHHHHHHHHHhc--cCCcCCh--hhhccchhccccccCCCeEEEeeecCccccCCCHHHH
Confidence 99999999999998 79999999999999999 6899999 9999 999999999999 99999
Q ss_pred HHHHHHHHHcCCCeEEEEecCCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHHHhCC
Q 023663 140 LKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSG 219 (279)
Q Consensus 140 ~~~~~~~~~lG~~~alvv~GeG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~vL~G 219 (279)
+.+++++..+|.+. ++|.+++++++. +| ||+. ++++.++++ ++++|+|
T Consensus 218 ~~lA~~l~~lG~~~---------------G~~~v~~lt~~~------~P--lG~~--------~G~~~E~ae-~~~vL~G 265 (436)
T 3h5q_A 218 EALAHAMVRIGNNV---------------GRNTMAIISDMN------QP--LGRA--------IGNALELQE-AIDTLKG 265 (436)
T ss_dssp HHHHHHHHHHHHHH---------------TCCEEEEEEECS------SC--SSSE--------EESHHHHHH-HHHHHTT
T ss_pred HHHHHHHHHhhhhc---------------CCeEEEEEcCCC------CC--CCCC--------CCCHHHHHH-HHHHHCC
Confidence 99999999998642 778888888776 45 7863 578999999 9999999
Q ss_pred C-CchHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHccHHHHHHHHHHHHhhh
Q 023663 220 E-RGAIADALILNAAAALLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKH 274 (279)
Q Consensus 220 ~-~~~~~~~v~~naa~~L~~~g~~~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~~ 274 (279)
+ ..+++|+|++|||.+||+.|++++++||+++|+++|+||+|+++|++|++.|+.
T Consensus 266 ~~~~~~~d~vl~nAa~~L~~ag~a~~~~eg~~~A~~~i~sG~A~~~l~~~v~~qGg 321 (436)
T 3h5q_A 266 QGPKDLTELVLTLGSQMVVLANKAETLEEARALLIEAINSGAALEKFKTFIKNQGG 321 (436)
T ss_dssp CSCHHHHHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHHHTSHHHHHHHHHHHHTTC
T ss_pred CCCccHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHhCcHHHHHHHHHHHHhCC
Confidence 9 568999999999999999999999999999999999999999999999999985
No 8
>2dsj_A Pyrimidine-nucleoside (thymidine) phosphorylase; pyrimidine-nucleoside phosphorylase, structural genomics; 1.80A {Thermus thermophilus}
Probab=100.00 E-value=4.1e-50 Score=378.73 Aligned_cols=233 Identities=21% Similarity=0.249 Sum_probs=208.2
Q ss_pred CccccccccCCC--CcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHc-CCCCCCCHHHH
Q 023663 1 MIKYATKVEGLG--DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDPEGV 77 (279)
Q Consensus 1 ~~~~~~~~~~~~--~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~L-Gi~~~~s~~~~ 77 (279)
|++++.+++.+. .++|+|||||||. ||||++|+++|++|+||+|||||+++|++||+|+||+| |++++++++++
T Consensus 62 M~~~~~~l~~~~~~~~vD~~gTGGdG~---niSt~~a~vvAa~Gv~VaKhGnR~~ss~~GsaDvLEaL~Gv~i~l~~e~~ 138 (423)
T 2dsj_A 62 MARSGKVLDLSGLPHPVDKHSSGGVGD---KVSLVVGPILAASGCTFAKMSGRGLAHTGGTIDKLESVPGWRGEMTEAEF 138 (423)
T ss_dssp HHTSSBCCCCTTSSSBEEEEEESSSCC---STHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTSTTCCCCCCHHHH
T ss_pred HHHhCCcCCccccCCceeEecCCCCCc---cHHHHHHHHHHhCCCcEEEECCCCCCCCccHHHHHHhCCCCCCCCCHHHH
Confidence 567777775432 2899999999998 79999999999999999999999999999999999999 99999999999
Q ss_pred HHHHHhcCeEEEeC-CccChhhhchHHHHhhhC-CCChhhhhhhccC---CCCCCceEE------Eee--ChhhHHHHHH
Q 023663 78 RRCVDEAGIGFMMS-TKYHPAMKFVRPVRKKLK-VKTVFNILGPMLN---PACVPFAVV------GVY--NENLVLKMAN 144 (279)
Q Consensus 78 ~~~l~~~g~~fl~~-~~~~P~l~~l~~lR~~lg-~Rt~~n~l~~LlN---P~~~~~~v~------Gv~--h~~~~~~~~~ 144 (279)
.+++++.||+|+++ +.|||+|++++++|+++| +||+||+++||+| |++++++|+ |+| ++++.+.+++
T Consensus 139 ~~~l~~~Gi~f~~~~~~~~PA~k~l~~lR~~lgtv~Ti~nilgpl~nkK~pag~~~~vldV~~G~Gaf~~~~~~~~~lA~ 218 (423)
T 2dsj_A 139 LERARRVGLVIAAQSPDLAPLDGKLYALRDVTATVESVPLIASSIMSKKLAAGARSIVLDVKVGRGAFMKTLEEARLLAK 218 (423)
T ss_dssp HHHHHHTSEEEESCGGGBSHHHHHHHHHHHTTTCCCCHHHHHHHHHHHHHHHTCSEEEEEEEESSSTTCBCHHHHHHHHH
T ss_pred HHHHHHcCEEEEecccccChHHHHHHHHHHHhcccCcHHHhHHHHhcCccCCCCCeEEEEeccCCCcccCCHHHHHHHHH
Confidence 99999999999877 899999999999999999 8999999999999 999999999 669 9999999999
Q ss_pred HHHHcCCCeEEEEecCCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHHHhCCCC-ch
Q 023663 145 ALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGER-GA 223 (279)
Q Consensus 145 ~~~~lG~~~alvv~GeG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~vL~G~~-~~ 223 (279)
++..+|.+ .+.+.+++++++. +++|+ .++++.++++.+ ++|+|+. .+
T Consensus 219 ~l~~lg~~---------------~G~~~v~~l~dg~--------~plg~--------~~G~a~E~ae~i-~vL~G~g~~~ 266 (423)
T 2dsj_A 219 TMVAIGQG---------------AGRRVRALLTSME--------APLGR--------AVGNAIEVREAI-EALKGEGPGD 266 (423)
T ss_dssp HHHHHHHH---------------TTCEEEEEEEECS--------SCSSS--------EEESHHHHHHHH-HHHTTCSCHH
T ss_pred HHHHHHHH---------------cCCeEEEEEcCCC--------Ccccc--------cCCCHHHHHHHH-HHHCCCCchh
Confidence 99998853 2567777777765 33443 357899999988 5999983 46
Q ss_pred HHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHccHHHHHHHHHHHHhhh
Q 023663 224 IADALILNAAAALLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKH 274 (279)
Q Consensus 224 ~~~~v~~naa~~L~~~g~~~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~~ 274 (279)
++|.|++|||.+||++|+ |+ ++|+++|+||+|+++|++|++.|+.
T Consensus 267 ~~d~vl~nAa~~L~~ag~--~l----~~A~~~l~sG~A~~kl~~li~~~~g 311 (423)
T 2dsj_A 267 LLEVALALAEEALRLEGL--DP----ALARKALEGGAALEKFRAFLEAQGG 311 (423)
T ss_dssp HHHHHHHHHHHHHHHTTC--CT----HHHHHHHHTSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHcCC--CH----HHHHHHHhcCcHHHHHHHHHHHhCC
Confidence 899999999999999998 66 8999999999999999999999875
No 9
>1brw_A PYNP, protein (pyrimidine nucleoside phosphorylase); domain movement, transferase; HET: MES; 2.10A {Geobacillus stearothermophilus} SCOP: a.46.2.1 c.27.1.1 d.41.3.1
Probab=100.00 E-value=3.5e-49 Score=374.30 Aligned_cols=231 Identities=23% Similarity=0.313 Sum_probs=206.9
Q ss_pred CccccccccCC---CCcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHc-CCCCCCCHHH
Q 023663 1 MIKYATKVEGL---GDAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDPEG 76 (279)
Q Consensus 1 ~~~~~~~~~~~---~~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~L-Gi~~~~s~~~ 76 (279)
|++++.+++.+ ..++|+|||||||.+ |||++|+++|++|+||+|||||++++++||+|+||+| |+++++++++
T Consensus 62 M~~~~~~v~~~~~~~~~vD~~gTGGdG~~---iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GsaDvLEaL~Gv~i~ls~e~ 138 (433)
T 1brw_A 62 MVQSGEMLDLSSIRGVKVDKHSTGGVGDT---TTLVLGPLVASVGVPVAKMSGRGLGHTGGTIDKLESVPGFHVEISKDE 138 (433)
T ss_dssp HHHTSCCCCCTTSCSCCEEEEECCCSSCC---HHHHHHHHHHTTTCCEEEEECCCBTTBCCHHHHHTTSTTCCCCCCHHH
T ss_pred HHHhCCcCCcccccCCceeeCCCCCCCcc---hHHHHHHHHHhCCCcEEEECCCCCCCCCCHHHHHHHCcCceecCCHHH
Confidence 56777776543 258999999999997 8999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHhcCeEEEeC-CccChhhhchHHHHhhhCCCChhhhhhhccCC--------CCCCceEEEe------e------C
Q 023663 77 VRRCVDEAGIGFMMS-TKYHPAMKFVRPVRKKLKVKTVFNILGPMLNP--------ACVPFAVVGV------Y------N 135 (279)
Q Consensus 77 ~~~~l~~~g~~fl~~-~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP--------~~~~~~v~Gv------~------h 135 (279)
+.+++++.||+|+++ +.|||+|++++++|+++ ||+||+ ||+|| .+++++|+|| | |
T Consensus 139 ~~~~l~~~Gi~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PLin~s~lskklA~G~~~~VlgVk~G~gaf~~~~de~ 214 (433)
T 1brw_A 139 FIRLVNENGIAIIGQTGDLTPADKKLYALRDVT--ATVNSI--PLIASSIMSKKIAAGADAIVLDVKTGAGAFMKKLDEA 214 (433)
T ss_dssp HHHHHHHHSEEEEECCTTSCHHHHHHHHHHHHH--TCCCCH--HHHHHHHHHHHHHHCCSEEEEEEEESTTSSCCSHHHH
T ss_pred HHHHHHHcCeeEecCchhhCHHHHHHHHHHHhh--CCccCh--hhcCcHhhHHHHhcCCCEEEEEeecccccccCCHHHH
Confidence 999999999999999 59999999999999999 899999 99999 6788999999 8 8
Q ss_pred hhhHHHHHHHHHHcCCCeEEEEecCCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHH
Q 023663 136 ENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRR 215 (279)
Q Consensus 136 ~~~~~~~~~~~~~lG~~~alvv~GeG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~ 215 (279)
+.+.+.+.++++.+|..+..++++ ++ +++|. .++++.++++. ++
T Consensus 215 ~~l~~~~v~~~~~~G~~~~~~i~~--~~-------------------------~plg~--------~~G~a~E~a~~-~~ 258 (433)
T 1brw_A 215 RRLARVMVDIGKRVGRRTMAVISD--MS-------------------------QPLGY--------AVGNALEVKEA-IE 258 (433)
T ss_dssp HHHHHHHHHHHHHTTCEEEEEEEE--CS-------------------------SCSSS--------EESSHHHHHHH-HH
T ss_pred HHHHHHHHHHHHHcCCEEEEEEcC--CC-------------------------Ccccc--------cCCCHHHHHHH-HH
Confidence 899999999999889877777763 11 23442 14788899865 99
Q ss_pred HhCCCC-chHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHccHHHHHHHHHHHHhhh
Q 023663 216 VLSGER-GAIADALILNAAAALLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKH 274 (279)
Q Consensus 216 vL~G~~-~~~~~~v~~naa~~L~~~g~~~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~~ 274 (279)
+|+|+. .+++|+|++|||.+||+.|+++|++||+++|+++|+||+|+++|++|++.|+.
T Consensus 259 vL~G~g~~~~~d~vl~nAa~~L~~~g~a~~~~eg~~~A~~~i~sG~A~~kl~~~i~~~~g 318 (433)
T 1brw_A 259 TLKGNGPHDLTELCLTLGSHMVYLAEKAPSLDEARRLLEEAIRSGAAIAAFKTFLAAQGG 318 (433)
T ss_dssp HHTTCSCHHHHHHHHHHHHHHHHHTTSSSSHHHHHHHHHHHHHHTHHHHHHHHHHHHTTC
T ss_pred HHCCCCChhHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcChHHHHHHHHHHHhCC
Confidence 999984 46889999999999999999999999999999999999999999999999875
No 10
>1uou_A Thymidine phosphorylase; transferase, glycosyltransferase, chemotaxis, angiogenesis; HET: CMU; 2.11A {Homo sapiens} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 2wk6_A 2wk5_A 2j0f_A
Probab=100.00 E-value=7.8e-49 Score=374.64 Aligned_cols=231 Identities=23% Similarity=0.278 Sum_probs=208.2
Q ss_pred CccccccccCCC----CcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHc-CCCCCCCHH
Q 023663 1 MIKYATKVEGLG----DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDPE 75 (279)
Q Consensus 1 ~~~~~~~~~~~~----~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~L-Gi~~~~s~~ 75 (279)
|++++.+++.+. .++|+|||||||.+ |||++|+++|++|+||+|||||++++++||+|+||+| |++++++++
T Consensus 89 Mr~~~~~v~~~~~~~~~~vD~~gTGGdG~~---iSt~~A~vvAa~Gv~VaKHGnRa~ss~~GSaDvLEaLpGv~i~ls~e 165 (474)
T 1uou_A 89 LAQSGQQLEWPEAWRQQLVDKHSTGGVGDK---VSLVLAPALAACGCKVPMISGRGLGHTGGTLDKLESIPGFNVIQSPE 165 (474)
T ss_dssp HHTTSCCCCCCGGGGGGBEEEEESCCTTCC---HHHHHHHHHHTTTCBEEEECCCCBTTBCCHHHHHTTSTTCCCCCCHH
T ss_pred HHHhCCcCCcccccCCCeeEeCCCCCCCce---eHHHHHHHHHhCCCCEEEECCCCCCCCCCHHHHHHhCCCCCCCCCHH
Confidence 567777765432 48999999999998 8999999999999999999999999999999999999 999999999
Q ss_pred HHHHHHHhcCeEEEeC-CccChhhhchHHHHhhhCCCChhhhhhhccCC--------CCCCceEEEe------e------
Q 023663 76 GVRRCVDEAGIGFMMS-TKYHPAMKFVRPVRKKLKVKTVFNILGPMLNP--------ACVPFAVVGV------Y------ 134 (279)
Q Consensus 76 ~~~~~l~~~g~~fl~~-~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP--------~~~~~~v~Gv------~------ 134 (279)
++.+++++.||+|+++ +.|||+|++++++|+++ ||+||+ ||+|| ....++|+|| |
T Consensus 166 ~~~~~l~~~Gi~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PLinpsi~skklA~g~~~~VlgVk~G~gafm~~lde 241 (474)
T 1uou_A 166 QMQVLLDQAGCCIVGQSEQLVPADGILYAARDVT--ATVDSL--PLITASILSKKLVEGLSALVVDVKFGGAAVFPNQEQ 241 (474)
T ss_dssp HHHHHHHHHSEEEECCCSSSSHHHHHHHHHHHHT--TCSSCH--HHHHHHHHHHHHHTTCSEEEEEEEEC--CCCCSHHH
T ss_pred HHHHHHHHcCeEEecCchhhCHHHHHHHHHHhhh--CCccch--hhcCcHHHHHHHhhcCCeEEEEeccccccccCCHHH
Confidence 9999999999999999 69999999999999995 899999 99999 7788999999 8
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEecCCcccccccCceEEEEEeCCeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHH
Q 023663 135 NENLVLKMANALQRFGLKRALVVHSEGLDEMSPLGPGLILDVTQEKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLR 214 (279)
Q Consensus 135 h~~~~~~~~~~~~~lG~~~alvv~GeG~dE~sp~~~t~v~~~~~g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~ 214 (279)
|+.+.+.+.++++.+|.++.+++++ ++ +++|. .++++.++++. .
T Consensus 242 ~~~la~~~v~~~~~~G~~~~~vitd--~~-------------------------~plg~--------~~G~a~E~ae~-~ 285 (474)
T 1uou_A 242 ARELAKTLVGVGASLGLRVAAALTA--MD-------------------------KPLGR--------CVGHALEVEEA-L 285 (474)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEEE--CS-------------------------SCSTT--------EESSHHHHHHH-H
T ss_pred HHHHHHHHHHHHHHCCCEEEEEEec--CC-------------------------Ccccc--------cCCCHHHHHHH-H
Confidence 8899999999999999988888874 22 12332 14788999975 4
Q ss_pred HHhCCCC-chHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHccHHHHHHHHHHHHhhh
Q 023663 215 RVLSGER-GAIADALILNAAAALLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKH 274 (279)
Q Consensus 215 ~vL~G~~-~~~~~~v~~naa~~L~~~g~~~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~~ 274 (279)
++|+|+. .+++|+|++|||.+||++|+++|++||+++|+++|+||+|+++|++|++.|+.
T Consensus 286 ~vL~G~g~~~~~d~vl~nAa~~L~~aG~a~~~~eg~~~A~e~i~sG~A~~kl~~li~~~~g 346 (474)
T 1uou_A 286 LCMDGAGPPDLRDLVTTLGGALLWLSGHAGTQAQGAARVAAALDDGSALGRFERMLAAQGV 346 (474)
T ss_dssp HHHTTCSCHHHHHHHHHHHHHHHHHHTSCSSHHHHHHHHHHHHHSSHHHHHHHHHHHHTTC
T ss_pred HHHCCCCchhHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcChHHHHHHHHHHHhCC
Confidence 9999984 67899999999999999999999999999999999999999999999998875
No 11
>2tpt_A Thymidine phosphorylase; transferase, salvage pathway; 2.60A {Escherichia coli} SCOP: a.46.2.1 c.27.1.1 d.41.3.1 PDB: 1azy_A 1tpt_A 1otp_A
Probab=100.00 E-value=1.4e-49 Score=377.73 Aligned_cols=242 Identities=23% Similarity=0.237 Sum_probs=196.8
Q ss_pred CccccccccCCC-----CcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHc-CCCCCCCH
Q 023663 1 MIKYATKVEGLG-----DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEAL-GVVIDLDP 74 (279)
Q Consensus 1 ~~~~~~~~~~~~-----~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~L-Gi~~~~s~ 74 (279)
|++++.+++.+. .++|+|||||||.+ |||++|+++|++|+||+|||||++++++||+|+||+| |+++++++
T Consensus 63 m~~~~~~~~~~~~~~~~~~vD~~gTGGdG~~---iSt~~A~vvAa~Gv~VaKHGnR~~ss~~GsaDvLEaL~Gv~~~ls~ 139 (440)
T 2tpt_A 63 MRDSGTVLDWKSLHLNGPIVDKHSTGGVGDV---TSLMLGPMVAACGGYIPMISGRGLGHTGGTLDKLESIPGFDIFPDD 139 (440)
T ss_dssp HHHTSBCCCCTTTTCSSCBEEEEECCCSSCC---HHHHHHHHHHHTTCBEEEEECCCCTTSCCHHHHHTTSTTCCSCCCH
T ss_pred HHHhCCcCCCcccccCCCeeeeCCCCCCCcc---HHHHHHHHHHhCCCcEEEECCCCCCCcccHHHHHHhCcCCCCCCCH
Confidence 466777765432 58999999999998 8999999999999999999999999999999999999 99999999
Q ss_pred HHHHHHHHhcCeEEEeC-CccChhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHcCCCe
Q 023663 75 EGVRRCVDEAGIGFMMS-TKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKR 153 (279)
Q Consensus 75 ~~~~~~l~~~g~~fl~~-~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~lG~~~ 153 (279)
+++.+++++.||+|+++ |.|||+|++++++|+++ ||+||+ ||+|| +.+.+++++ |.+
T Consensus 140 e~~~~~l~~~G~~fl~a~~~~hPA~k~l~~lR~~l--rTvfNi--PLin~------------s~lskk~A~-----G~~- 197 (440)
T 2tpt_A 140 NRFREIIKDVGVAIIGQTSSLAPADKRFYATRDIT--ATVDSI--PLITA------------SILAKKLAE-----GLD- 197 (440)
T ss_dssp HHHHHHHHHTSEEEEECCTTBSHHHHHHHHHHHHT--TCCCCH--HHHHH------------HHHHHHHTT-----CCS-
T ss_pred HHHHHHHHHcCEEEEcCchhhCHHHHHHHHHHHhh--CCccCh--hhcCC------------HHHHHHHhc-----CCC-
Confidence 99999999999999999 89999999999999999 899999 99996 234444432 665
Q ss_pred EEEE---ecC-----CcccccccCceEEEEEeC-CeEEEEEeCCCCCCCCCCCCCCcCCCChHHHHHHHHHHhCCCC--c
Q 023663 154 ALVV---HSE-----GLDEMSPLGPGLILDVTQ-EKIERFSFDPLDYGIPRCTLESLQGGGPAYNAEVLRRVLSGER--G 222 (279)
Q Consensus 154 alvv---~Ge-----G~dE~sp~~~t~v~~~~~-g~~~~~~i~p~d~gl~~~~~~~~~~~~~~~~a~~~~~vL~G~~--~ 222 (279)
++|+ +|+ |+||+++.++|.++...+ |.-....++. +. .++... ++++.++++. +++|+|+. .
T Consensus 198 alVvdVk~G~gaf~~~~de~~~la~t~v~~~~~~G~~~~a~itd---~~--~plg~~-~G~a~E~ae~-~~vL~G~g~~~ 270 (440)
T 2tpt_A 198 ALVMDVKVGSGAFMPTYELSEALAEAIVGVANGAGVRTTALLTD---MN--QVLASS-AGNAVEVREA-VQFLTGEYRNP 270 (440)
T ss_dssp EEEEEEEESTTSSSSSHHHHHHHHHHHHHHHHHTTCEEEEEEEE---CS--SCSSSC-EESHHHHHHH-HHHHHTSCCCH
T ss_pred eEEEEeccCCccccCCHHHHHHHHHHHHHHHHHcCCceEEEecC---CC--Cchhhc-CCCHHHHHHH-HHHHCCCCCch
Confidence 6666 663 567776666555433211 1111111211 00 223322 5789999987 99999983 3
Q ss_pred hHHHHHHHHHHHHHHHcccCCCHHHHHHHHHHHHHccHHHHHHHHHHHHhhh
Q 023663 223 AIADALILNAAAALLVSCKVNTLAEGVALAREIQLSGKALNTLDLWIEVSKH 274 (279)
Q Consensus 223 ~~~~~v~~naa~~L~~~g~~~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~~ 274 (279)
+++|+|++|||.+||++|+++|+++|+++|+++|+||+|+++|++|++.|+.
T Consensus 271 ~~~d~vl~nAa~~L~~ag~a~~~~eg~~~A~~~i~sG~A~~kl~~~v~~~~g 322 (440)
T 2tpt_A 271 RLFDVTMALCVEMLISGKLAKDDAEARAKLQAVLDNGKAAEVFGRMVAAQKG 322 (440)
T ss_dssp HHHHHHHHHHHHHHHHTTSCSSHHHHHHHHHHHHHTSHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhcChHHHHHHHHHHHhCC
Confidence 5789999999999999999999999999999999999999999999999875
No 12
>4ex8_A ALNA; alpha/beta/alpha-domain, C-glycosynthase, divalent metal ION ligase; 2.10A {Streptomyces SP} PDB: 4ex9_A*
Probab=60.28 E-value=6.7 Score=35.04 Aligned_cols=123 Identities=21% Similarity=0.191 Sum_probs=78.5
Q ss_pred eeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCccc------HHHHHHHc---------CCCCCCCHHHHHHHH
Q 023663 17 IVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACG------SADVLEAL---------GVVIDLDPEGVRRCV 81 (279)
Q Consensus 17 ~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~G------s~dvLe~L---------Gi~~~~s~~~~~~~l 81 (279)
++..|.+|..| -....+++..+|++|+-.|+=+==.+.+ |+|+-|-- |+..=++.....+.|
T Consensus 105 ~~a~g~~GaTT---VaaTm~lA~~AGI~VFaTGGiGGVHRgae~t~DISaDL~eLarTpV~VVcaG~KsILDi~~TLE~L 181 (316)
T 4ex8_A 105 ALAGGGLGATT---VAGTIVIAERAGIQVFTTAGIGGVHRRGEDTLDISPDLLQFRKTKMTVVSGGAKSILDHRLTAEYL 181 (316)
T ss_dssp HHHHCSCBEEC---HHHHHHHHHHHTCCEEECSCBCCBBTTHHHHCCBCTHHHHTTTCCEEEEESBBCTTBCHHHHHHHH
T ss_pred HHhCCCCcccc---HHHHHHHHHHCCCcEEEeCCccccCCCCCCCcchhhhHHHhcCCCeEEEecccchhhcchHHHHHH
Confidence 45668888776 3344556667799999988755212221 67766621 666668889999999
Q ss_pred HhcCeEEEeC-CccChhh------------------hchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHH
Q 023663 82 DEAGIGFMMS-TKYHPAM------------------KFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKM 142 (279)
Q Consensus 82 ~~~g~~fl~~-~~~~P~l------------------~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~ 142 (279)
+..|...+.- .+..|++ .+++..+++||+++-+ -+.||....+.+-+ ......+
T Consensus 182 ET~GV~Vvgy~td~fPaFy~r~Sg~~~pr~d~~~e~A~~~~a~~~lgl~~g~----lvanPiP~e~~~~~---~~i~~~I 254 (316)
T 4ex8_A 182 ETAGVPVYGYRTDKLAAFVVREADVPVTRMDDLHTAARAAEAHWQVNGPGTV----LLTSPIDEQDAVDE---AIVEAAI 254 (316)
T ss_dssp HHTTCCEEEETCSBCCBTTBSCCSCBCEEESSHHHHHHHHHHHHHHHCSCEE----EEECCCCGGGCCCH---HHHHHHH
T ss_pred HhCCceEEEecCCCCceeeeCCCCCcCCCCCCHHHHHHHHHHHHHhCCCCeE----EEEcCCChhhcCCH---HHHHHHH
Confidence 9999887743 4555543 3566678888877642 46788776665432 2333445
Q ss_pred HHHHHHc
Q 023663 143 ANALQRF 149 (279)
Q Consensus 143 ~~~~~~l 149 (279)
.++++..
T Consensus 255 ~~Al~eA 261 (316)
T 4ex8_A 255 AEALAQC 261 (316)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555444
No 13
>4gim_A Pseudouridine-5'-phosphate glycosidase; alpha-beta-alpha sandwich fold, hydrolase; HET: PSU; 1.80A {Escherichia coli} PDB: 4gij_A 4gik_A* 4gil_A*
Probab=54.53 E-value=23 Score=31.80 Aligned_cols=122 Identities=25% Similarity=0.266 Sum_probs=76.3
Q ss_pred eCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCccc------HHHHHHHc---------CCCCCCCHHHHHHHHH
Q 023663 18 VGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACG------SADVLEAL---------GVVIDLDPEGVRRCVD 82 (279)
Q Consensus 18 ~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~G------s~dvLe~L---------Gi~~~~s~~~~~~~l~ 82 (279)
+..|.+|..| -....+++..+|++|+-.|+=+==.+.+ |+|+-|-- |+..=++.....+.|+
T Consensus 126 ~a~~~~GaTT---VaaTm~lA~~AGI~VFaTGGIGGVHRgae~t~DISADL~eLarTpV~VVcAG~KSILDi~~TLE~LE 202 (335)
T 4gim_A 126 VAAGKNGATT---VASTMIIAALAGIKVFATGGIGGVHRGAEHTFDISADLQELANTNVTVVCAGAASILDLGLTTEYLE 202 (335)
T ss_dssp HHTTCCEEEC---HHHHHHHHHHTTCCEEECSCCCCBBTTHHHHCCBCHHHHHHHHSCCEEEECBCCTTBCHHHHHHHHH
T ss_pred hhcCCCcccc---HHHHHHHHHHCCCcEEeeCCcCccCCCCCCCccccchHHHhccCCeEEEeecchhhccchhHHHHHH
Confidence 4567777776 3345566677899999888755222222 67776632 6666688889999999
Q ss_pred hcCeEEEe-CCccChhh-------------------hchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHH
Q 023663 83 EAGIGFMM-STKYHPAM-------------------KFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKM 142 (279)
Q Consensus 83 ~~g~~fl~-~~~~~P~l-------------------~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~ 142 (279)
..|+..+. ..+..|++ .+++..|++||+.+-+ -+.||....+.+- .......+
T Consensus 203 T~GVpVvgy~td~fPaFy~r~Sg~~~~~rvd~~~e~A~i~~~~~~lgl~~g~----lvanPIP~e~~i~---~~~i~~~I 275 (335)
T 4gim_A 203 TFGVPLIGYQTKALPAFFCRTSPFDVSIRLDSASEIARAMVVKWQSGLNGGL----VVANPIPEQFAMP---EHTINAAI 275 (335)
T ss_dssp HTTCCEEEETCSBCCBTTBSCCSSBCSEEECCHHHHHHHHHHHHHTTCCSCE----EEECCCCGGGCCC---HHHHHHHH
T ss_pred hcCceEEEecCCCCceeeccCCCCcCcceeCCHHHHHHHHHHHHHcCCCCce----EEeCCCCchhcCC---HHHHHHHH
Confidence 99987663 34444443 3456667888876532 4678877666553 22333344
Q ss_pred HHHHHHc
Q 023663 143 ANALQRF 149 (279)
Q Consensus 143 ~~~~~~l 149 (279)
.++++..
T Consensus 276 ~~Al~eA 282 (335)
T 4gim_A 276 DQAVAEA 282 (335)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555443
No 14
>3cio_A ETK, tyrosine-protein kinase ETK; WZC, escherichia coli tyrosine kinase domain, signaling protein, transferase, inner membrane, membrane; 2.50A {Escherichia coli}
Probab=40.48 E-value=22 Score=30.96 Aligned_cols=38 Identities=18% Similarity=0.216 Sum_probs=28.9
Q ss_pred CCcceeeCC-CCCCCCCccchHHHHHHHHhCCCcEEeecCC
Q 023663 12 GDAVDIVGT-GGDGANTVNISTGASILAAACGAKVAKQGSR 51 (279)
Q Consensus 12 ~~~~D~~gt-ggdG~~t~nis~~aA~vlA~~G~~V~kHG~~ 51 (279)
..+|=++|+ ||.|+.| ++...|..+|..|.+|+.--.+
T Consensus 104 ~kvI~vts~kgG~GKTt--va~nLA~~lA~~G~rVLLID~D 142 (299)
T 3cio_A 104 NNILMITGATPDSGKTF--VSSTLAAVIAQSDQKVLFIDAD 142 (299)
T ss_dssp CCEEEEEESSSSSCHHH--HHHHHHHHHHHTTCCEEEEECC
T ss_pred CeEEEEECCCCCCChHH--HHHHHHHHHHhCCCcEEEEECC
Confidence 345667775 7889887 6777888889999999986544
No 15
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=39.95 E-value=70 Score=24.00 Aligned_cols=44 Identities=14% Similarity=0.002 Sum_probs=21.7
Q ss_pred HHHHhhhCCCChhhhhhhccC-CCCCCceEEEeeChhhHHHHHHH
Q 023663 102 RPVRKKLKVKTVFNILGPMLN-PACVPFAVVGVYNENLVLKMANA 145 (279)
Q Consensus 102 ~~lR~~lg~Rt~~n~l~~LlN-P~~~~~~v~Gv~h~~~~~~~~~~ 145 (279)
..+|+..|-.-+...+.+.+. ..+..+.+-|+.++...+.+.+.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~dg~~~~~~~~~l~~~ 98 (179)
T 3lw7_A 54 KRLREIYGDGVVARLCVEELGTSNHDLVVFDGVRSLAEVEEFKRL 98 (179)
T ss_dssp HHHHHHHCTTHHHHHHHHHHCSCCCSCEEEECCCCHHHHHHHHHH
T ss_pred HHHHhhCCHHHHHHHHHHHHHhcCCCeEEEeCCCCHHHHHHHHHH
Confidence 334444454444444455552 22345666777555555544443
No 16
>2woo_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; 3.01A {Schizosaccharomyces pombe}
Probab=39.79 E-value=12 Score=33.32 Aligned_cols=29 Identities=28% Similarity=0.347 Sum_probs=25.2
Q ss_pred eeCCCCCCCCCccchHHHHHHHHhCCCcEEe
Q 023663 17 IVGTGGDGANTVNISTGASILAAACGAKVAK 47 (279)
Q Consensus 17 ~~gtggdG~~t~nis~~aA~vlA~~G~~V~k 47 (279)
+.|-||.|+.| ++...|..+|+.|.+|..
T Consensus 24 ~sgkGGvGKTT--va~~LA~~lA~~G~rVll 52 (329)
T 2woo_A 24 VGGKGGVGKTT--TSCSLAIQMSKVRSSVLL 52 (329)
T ss_dssp EECSSSSSHHH--HHHHHHHHHHTSSSCEEE
T ss_pred EeCCCCCcHHH--HHHHHHHHHHHCCCeEEE
Confidence 56789999997 788888999999999997
No 17
>3qgm_A P-nitrophenyl phosphatase (PHO2); structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 2.00A {Archaeoglobus fulgidus} SCOP: c.108.1.0
Probab=38.91 E-value=24 Score=29.38 Aligned_cols=58 Identities=17% Similarity=0.181 Sum_probs=41.0
Q ss_pred cceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCCC
Q 023663 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (279)
Q Consensus 14 ~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~~ 71 (279)
++|+-||=.|+.+.++-+.-+---+.+.|++|+.--||+.-+..+..+.|+.+|+++.
T Consensus 12 ~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~l~Tgr~~r~~~~~~~~l~~lg~~~~ 69 (268)
T 3qgm_A 12 IIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVG 69 (268)
T ss_dssp EEECBTTTEETTEECHHHHHHHHHHHHTTCEEEEEECCSSSCHHHHHHHHHHTTCCCC
T ss_pred EEcCcCcEECCCEeCcCHHHHHHHHHHcCCeEEEEeCcCCCCHHHHHHHHHHCCCCCC
Confidence 5788888777766433222233345568999998888776666678889999999753
No 18
>3bfv_A CAPA1, CAPB2, membrane protein CAPA1, protein tyrosine kinase; chimerical protein, P-loop protein, capsule biogenesis/degradation; HET: ADP; 1.80A {Staphylococcus aureus} PDB: 2ved_A*
Probab=38.86 E-value=23 Score=30.41 Aligned_cols=37 Identities=22% Similarity=0.292 Sum_probs=27.8
Q ss_pred CcceeeCC-CCCCCCCccchHHHHHHHHhCCCcEEeecCC
Q 023663 13 DAVDIVGT-GGDGANTVNISTGASILAAACGAKVAKQGSR 51 (279)
Q Consensus 13 ~~~D~~gt-ggdG~~t~nis~~aA~vlA~~G~~V~kHG~~ 51 (279)
.+|=+.++ ||.|+.| ++.-.|..+|+.|.+|+.--.+
T Consensus 83 kvI~vts~kgG~GKTt--~a~nLA~~lA~~G~rVLLID~D 120 (271)
T 3bfv_A 83 QSIVITSEAPGAGKST--IAANLAVAYAQAGYKTLIVDGD 120 (271)
T ss_dssp CEEEEECSSTTSSHHH--HHHHHHHHHHHTTCCEEEEECC
T ss_pred eEEEEECCCCCCcHHH--HHHHHHHHHHhCCCeEEEEeCC
Confidence 45656665 8889886 5777788889999999975443
No 19
>3epr_A Hydrolase, haloacid dehalogenase-like family; structural genomics, unknown function, HAD superfamily hydro PSI-2; 1.55A {Streptococcus agalactiae serogroup V} SCOP: c.108.1.14 PDB: 1ys9_A 1wvi_A 1ydf_A
Probab=38.77 E-value=17 Score=30.42 Aligned_cols=58 Identities=12% Similarity=0.086 Sum_probs=42.1
Q ss_pred cceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCCC
Q 023663 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (279)
Q Consensus 14 ~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~~ 71 (279)
++|+-||=.|+.+.++-+.-+---+.+.|++|+.=.|++--+..+..+.|+.+|+++.
T Consensus 9 ~~DlDGTLl~~~~~i~~~~eal~~l~~~G~~vvl~Tn~~gr~~~~~~~~l~~lg~~~~ 66 (264)
T 3epr_A 9 LIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLRGFNVETP 66 (264)
T ss_dssp EECCBTTTEETTEECHHHHHHHHHHHHHTCCEEEEECCCSSCHHHHHHHHHTTTCCCC
T ss_pred EEeCCCceEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCCC
Confidence 5888898777777664333333345567999998888775566678899999999754
No 20
>1o51_A Hypothetical protein TM0021; ferredoxin-like fold, structural genomics, joint center for structural genomics, JCSG; HET: ADP; 2.50A {Thermotoga maritima} SCOP: d.58.5.4
Probab=38.53 E-value=32 Score=25.89 Aligned_cols=29 Identities=17% Similarity=0.265 Sum_probs=25.0
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEec-CCcc
Q 023663 135 NENLVLKMANALQRFGLKRALVVHS-EGLD 163 (279)
Q Consensus 135 h~~~~~~~~~~~~~lG~~~alvv~G-eG~d 163 (279)
++++.+.+.+.++..|..-+.|++| +|.-
T Consensus 28 g~pL~~~Iv~~~~~~GiaGaTV~rgi~GfG 57 (114)
T 1o51_A 28 GKPLFEYLVKRAYELGMKGVTVYRGIMGFG 57 (114)
T ss_dssp TEEHHHHHHHHHHHTTCSCCEEEECSCCCC
T ss_pred CeEHHHHHHHHHHHCCCCeEEEEcCcEEEC
Confidence 5678888899999999999999999 8854
No 21
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=38.20 E-value=14 Score=32.05 Aligned_cols=36 Identities=28% Similarity=0.413 Sum_probs=28.3
Q ss_pred CcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecC
Q 023663 13 DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGS 50 (279)
Q Consensus 13 ~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~ 50 (279)
.+|=++|.||.|+.| ++...|..+|+.|.+|+.--.
T Consensus 42 ~vI~v~~KGGvGKTT--~a~nLA~~La~~G~~VlliD~ 77 (307)
T 3end_A 42 KVFAVYGKGGIGKST--TSSNLSAAFSILGKRVLQIGC 77 (307)
T ss_dssp EEEEEECSTTSSHHH--HHHHHHHHHHHTTCCEEEEEE
T ss_pred eEEEEECCCCccHHH--HHHHHHHHHHHCCCeEEEEeC
Confidence 356677999999997 567778888999999986433
No 22
>3iqw_A Tail-anchored protein targeting factor GET3; ATPase, Zn binding, protein transport; HET: ANP; 3.00A {Chaetomium thermophilum} PDB: 3iqx_A* 3ibg_A*
Probab=37.55 E-value=19 Score=32.26 Aligned_cols=46 Identities=24% Similarity=0.234 Sum_probs=34.6
Q ss_pred cceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHH
Q 023663 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLE 64 (279)
Q Consensus 14 ~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe 64 (279)
++=+.|-||.|+.| ++...|..+|..|.+|+.-..+ +..+..++|.
T Consensus 18 i~~~sgkGGvGKTt--~a~~lA~~la~~g~~vllid~D---~~~~l~~~l~ 63 (334)
T 3iqw_A 18 WIFVGGKGGVGKTT--TSCSLAIQLAKVRRSVLLLSTD---PAHNLSDAFS 63 (334)
T ss_dssp EEEEECSTTSSHHH--HHHHHHHHHTTSSSCEEEEECC---SSCHHHHHHT
T ss_pred EEEEeCCCCccHHH--HHHHHHHHHHhCCCcEEEEECC---CCCChhHHhc
Confidence 44467889999997 6777888899999999988776 3444555553
No 23
>2l48_A N-acetylmuramoyl-L-alanine amidase; bacillus anthracis gamma- phage endolysin, PLYG, cell WALL B domain, homodimer, ACT-type domain; NMR {Bacillus phage gamma}
Probab=36.85 E-value=65 Score=22.99 Aligned_cols=37 Identities=16% Similarity=0.321 Sum_probs=32.3
Q ss_pred CCceEEEeeChhhHHHHHHHHHHcCCCeEEEEecCCc
Q 023663 126 VPFAVVGVYNENLVLKMANALQRFGLKRALVVHSEGL 162 (279)
Q Consensus 126 ~~~~v~Gv~h~~~~~~~~~~~~~lG~~~alvv~GeG~ 162 (279)
-.+...|-|.+...+-+..++..+|++.-++++++|+
T Consensus 19 ~n~V~TGgfg~~~v~ev~~am~~~g~~gkii~~~dGl 55 (85)
T 2l48_A 19 QNIIQSGAFSPYETPDVMGALTSLKMTADFILQSDGL 55 (85)
T ss_dssp CCCEEECCBCTTTHHHHHHHHHHTTCCEEEEECTTSC
T ss_pred ceEEEecccCHHHHHHHHHHHHHcCceEEEEECCCce
Confidence 3678899999999999999999999987788877774
No 24
>3zq6_A Putative arsenical pump-driving ATPase; tail-anchored, membrane protein; HET: ADP; 2.11A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=36.24 E-value=13 Score=32.74 Aligned_cols=37 Identities=32% Similarity=0.383 Sum_probs=28.5
Q ss_pred cceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCC
Q 023663 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRS 52 (279)
Q Consensus 14 ~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~ 52 (279)
++=+.|.||.|+.| ++...|..+|+.|.+|+.--.+.
T Consensus 16 i~v~sgKGGvGKTT--vA~~LA~~lA~~G~rVLlvD~D~ 52 (324)
T 3zq6_A 16 FVFIGGKGGVGKTT--ISAATALWMARSGKKTLVISTDP 52 (324)
T ss_dssp EEEEEESTTSSHHH--HHHHHHHHHHHTTCCEEEEECCS
T ss_pred EEEEeCCCCchHHH--HHHHHHHHHHHCCCcEEEEeCCC
Confidence 33356789999997 67778888899999998765543
No 25
>3ug7_A Arsenical pump-driving ATPase; tail-anchored, membrane protein, targeting factor, ATP-bindi TRC40, ARSA, nucleotide-binding; HET: ADP; 2.90A {Methanocaldococcus jannaschii} PDB: 3ug6_A*
Probab=35.83 E-value=15 Score=32.98 Aligned_cols=35 Identities=29% Similarity=0.405 Sum_probs=27.8
Q ss_pred ceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCC
Q 023663 15 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSR 51 (279)
Q Consensus 15 ~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~ 51 (279)
+=+.|.||.||.| ++...|..+|..|.+|+.--.+
T Consensus 29 ~v~sgKGGvGKTT--vA~~LA~~lA~~G~rVLlvD~D 63 (349)
T 3ug7_A 29 IMFGGKGGVGKTT--MSAATGVYLAEKGLKVVIVSTD 63 (349)
T ss_dssp EEEECSSSTTHHH--HHHHHHHHHHHSSCCEEEEECC
T ss_pred EEEeCCCCccHHH--HHHHHHHHHHHCCCeEEEEeCC
Confidence 3356889999997 6777888889999999876544
No 26
>1ihu_A Arsenical pump-driving ATPase; aluminum fluoride, ADP, ARSA ATPase, ATP binding site, hydro; HET: ADP; 2.15A {Escherichia coli} SCOP: c.37.1.10 c.37.1.10 PDB: 1f48_A* 1ii0_A* 1ii9_A*
Probab=35.80 E-value=15 Score=35.34 Aligned_cols=37 Identities=27% Similarity=0.346 Sum_probs=29.3
Q ss_pred CcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCC
Q 023663 13 DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSR 51 (279)
Q Consensus 13 ~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~ 51 (279)
.++=+.|.||.||.| ++...|..+|+.|.+|+.-..+
T Consensus 9 ~i~~~sgkGGvGKTT--~a~~lA~~lA~~G~rVLlvd~D 45 (589)
T 1ihu_A 9 PYLFFTGKGGVGKTS--ISCATAIRLAEQGKRVLLVSTD 45 (589)
T ss_dssp SEEEEECSTTSSHHH--HHHHHHHHHHHTTCCEEEEECC
T ss_pred EEEEEeCCCcCHHHH--HHHHHHHHHHHCCCcEEEEECC
Confidence 344478999999997 6788888899999999984443
No 27
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=33.98 E-value=15 Score=32.50 Aligned_cols=37 Identities=27% Similarity=0.399 Sum_probs=29.9
Q ss_pred CcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCC
Q 023663 13 DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSR 51 (279)
Q Consensus 13 ~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~ 51 (279)
++|=|.|=||.||.| ++.=.|..||..|.+|..-..+
T Consensus 49 KVIAIaGKGGVGKTT--tavNLA~aLA~~GkkVllID~D 85 (314)
T 3fwy_A 49 KVFAVYGKGGIGKST--TSSNLSAAFSILGKRVLQIGCD 85 (314)
T ss_dssp EEEEEECSTTSSHHH--HHHHHHHHHHHTTCCEEEEEES
T ss_pred eEEEEECCCccCHHH--HHHHHHHHHHHCCCeEEEEecC
Confidence 467788999999996 3555777789999999987766
No 28
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=33.83 E-value=1.3e+02 Score=27.50 Aligned_cols=143 Identities=10% Similarity=0.052 Sum_probs=96.4
Q ss_pred eeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCC----CCcc---------c--HHHHHHHcCCCCCCCHHHHHHHH
Q 023663 17 IVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSS----SSAC---------G--SADVLEALGVVIDLDPEGVRRCV 81 (279)
Q Consensus 17 ~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~----~~~~---------G--s~dvLe~LGi~~~~s~~~~~~~l 81 (279)
|...|.+...++....-.+-.++.+|.-++|.+..-. +..+ | .-|+++.++.+.+ -..+..+.-
T Consensus 32 IAEiG~NH~Gsle~A~~li~~Ak~aGAdavKfQ~~k~~tl~s~~~~~fq~~~~~~~~~ye~~~~~~l~~e-~~~~L~~~~ 110 (385)
T 1vli_A 32 IAEAGINHDGKLDQAFALIDAAAEAGADAVKFQMFQADRMYQKDPGLYKTAAGKDVSIFSLVQSMEMPAE-WILPLLDYC 110 (385)
T ss_dssp EEEEETTTTTCHHHHHHHHHHHHHHTCSEEEECCBCGGGGTSCCC---------CCCHHHHGGGBSSCGG-GHHHHHHHH
T ss_pred EEeecCcccccHHHHHHHHHHHHHhCCCEEeeeeeccCcccCcchhhhccCCCCCccHHHHHHhcCCCHH-HHHHHHHHH
Confidence 5554555545777777788888999999999997653 2211 1 2378888887654 378888889
Q ss_pred HhcCeEEEeCCccChhhhchHHHH---hhhCCCChhhhhhhccCCC----CCCceEEEeeChhhHHHHHHHHHHcCCCeE
Q 023663 82 DEAGIGFMMSTKYHPAMKFVRPVR---KKLKVKTVFNILGPMLNPA----CVPFAVVGVYNENLVLKMANALQRFGLKRA 154 (279)
Q Consensus 82 ~~~g~~fl~~~~~~P~l~~l~~lR---~~lg~Rt~~n~l~~LlNP~----~~~~~v~Gv~h~~~~~~~~~~~~~lG~~~a 154 (279)
++.|+.|+..|-=..++..+..+. -++|=|.+-|+ |||-=+ .|-..=+|...-+=...-.+.++..|.++.
T Consensus 111 ~~~Gi~~~stpfD~~svd~l~~~~vd~~KIgS~~~~N~--pLL~~va~~gKPViLStGmaTl~Ei~~Ave~i~~~Gn~~i 188 (385)
T 1vli_A 111 REKQVIFLSTVCDEGSADLLQSTSPSAFKIASYEINHL--PLLKYVARLNRPMIFSTAGAEISDVHEAWRTIRAEGNNQI 188 (385)
T ss_dssp HHTTCEEECBCCSHHHHHHHHTTCCSCEEECGGGTTCH--HHHHHHHTTCSCEEEECTTCCHHHHHHHHHHHHTTTCCCE
T ss_pred HHcCCcEEEccCCHHHHHHHHhcCCCEEEECcccccCH--HHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHCCCCcE
Confidence 999999998876666666664441 24566666676 555443 233444577655555566677777787778
Q ss_pred EEEec-CCc
Q 023663 155 LVVHS-EGL 162 (279)
Q Consensus 155 lvv~G-eG~ 162 (279)
++.++ .++
T Consensus 189 iLlhc~s~Y 197 (385)
T 1vli_A 189 AIMHCVAKY 197 (385)
T ss_dssp EEEEECSSS
T ss_pred EEEeccCCC
Confidence 88887 664
No 29
>3kjh_A CO dehydrogenase/acetyl-COA synthase complex, accessory protein COOC; Zn-bound dimer, nickel binding protein, ATPase; 1.90A {Carboxydothermus hydrogenoformans} PDB: 3kjg_A* 3kje_A 3kji_A*
Probab=33.65 E-value=9.8 Score=31.30 Aligned_cols=32 Identities=25% Similarity=0.382 Sum_probs=25.5
Q ss_pred eeCCCCCCCCCccchHHHHHHHHhCCCcEEeecC
Q 023663 17 IVGTGGDGANTVNISTGASILAAACGAKVAKQGS 50 (279)
Q Consensus 17 ~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~ 50 (279)
+.|-||.|+.| ++...|..+|..|.+|+.-=.
T Consensus 5 vs~kGGvGKTt--~a~~LA~~la~~g~~VlliD~ 36 (254)
T 3kjh_A 5 VAGKGGVGKTT--VAAGLIKIMASDYDKIYAVDG 36 (254)
T ss_dssp EECSSSHHHHH--HHHHHHHHHTTTCSCEEEEEE
T ss_pred EecCCCCCHHH--HHHHHHHHHHHCCCeEEEEeC
Confidence 36789999997 577788888999999986433
No 30
>1vkm_A Conserved hypothetical protein TM1464; indigoidine synthase A-like fold, structural genomics, joint for structural genomics, JCSG; HET: MSE UNL; 1.90A {Thermotoga maritima} SCOP: c.138.1.1
Probab=33.38 E-value=33 Score=30.31 Aligned_cols=116 Identities=24% Similarity=0.308 Sum_probs=74.0
Q ss_pred eeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCccc---HHHHHHH---------cCCCCCCCHHHHHHHHHhc
Q 023663 17 IVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACG---SADVLEA---------LGVVIDLDPEGVRRCVDEA 84 (279)
Q Consensus 17 ~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~G---s~dvLe~---------LGi~~~~s~~~~~~~l~~~ 84 (279)
++..|.+|..| -....+++..+|++|+-.|+=+==.+.. |+|+-|- -|+..=++.....+.|+..
T Consensus 98 ~~a~g~~GaTT---VaaTm~lA~~AGI~VFaTGGiGGVHRgt~DISaDL~eL~rTpV~VVcaG~KsILDi~~TLE~LET~ 174 (297)
T 1vkm_A 98 VVAEGKNAATT---VSATIFLSRRIGIEVVVTGGTGGVHPGRVDVSQDLTEMSSSRAVLVSSGIKSILDVEATFEMLETL 174 (297)
T ss_dssp HHHHTCCEEEC---HHHHHHHHHHHTCCEEECSCBCCBCTTSSCBCHHHHHHTTCCEEEEESBBCTTSCHHHHHHHHHHT
T ss_pred HHhCCCCchhh---HHHHHHHHHHcCCcEEEecccccccCCCcccchhHHHhcCCCeEEEecccchhhcchhHHHHHHhC
Confidence 45667877776 3344555667799999888754212212 6777663 2556667888888999999
Q ss_pred CeEEEeC-CccChhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHcCCCeEEEEe
Q 023663 85 GIGFMMS-TKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGLKRALVVH 158 (279)
Q Consensus 85 g~~fl~~-~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~lG~~~alvv~ 158 (279)
|...+.- .+..|++.. +.=|++ .+ -+-+|+-...+..+-..+|.+..++|-
T Consensus 175 GV~Vvgy~t~~fPaF~t-----r~Sg~~--------------~p----~~d~~~e~A~~~~~~~~lgl~~g~lva 226 (297)
T 1vkm_A 175 EIPLVGFRTNEFPLFFS-----RKSGRR--------------VP----RIENVEEVLKIYESMKEMELEKTLMVL 226 (297)
T ss_dssp TCCEEEESCSBCCBTTB-----SCCSCB--------------CC----EECSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CceEEEecCCCCCceec-----CCCCCc--------------CC----CCCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9876643 556676632 111221 11 355666666666777888988888874
No 31
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=33.25 E-value=32 Score=30.80 Aligned_cols=37 Identities=27% Similarity=0.343 Sum_probs=27.9
Q ss_pred CcceeeC-CCCCCCCCccchHHHHHHHHhCCCcEEeecCC
Q 023663 13 DAVDIVG-TGGDGANTVNISTGASILAAACGAKVAKQGSR 51 (279)
Q Consensus 13 ~~~D~~g-tggdG~~t~nis~~aA~vlA~~G~~V~kHG~~ 51 (279)
.+|=+.+ -||.|+.| ++...|..+|..|.+|+.--.+
T Consensus 144 kvIav~s~KGGvGKTT--~a~nLA~~La~~g~rVlliD~D 181 (373)
T 3fkq_A 144 SVVIFTSPCGGVGTST--VAAACAIAHANMGKKVFYLNIE 181 (373)
T ss_dssp EEEEEECSSTTSSHHH--HHHHHHHHHHHHTCCEEEEECC
T ss_pred eEEEEECCCCCChHHH--HHHHHHHHHHhCCCCEEEEECC
Confidence 4455554 79999887 5666777888889999987665
No 32
>1byi_A Dethiobiotin synthase; biotin synthesis, cyclo-ligase, ligase; 0.97A {Escherichia coli} SCOP: c.37.1.10 PDB: 1bs1_A* 1a82_A 1dad_A* 1dae_A* 1daf_A* 1dag_A* 1dah_A* 1dai_A* 1dak_A* 1dam_A* 1dbs_A 1dts_A
Probab=32.84 E-value=17 Score=29.48 Aligned_cols=29 Identities=28% Similarity=0.259 Sum_probs=23.0
Q ss_pred eeCC-CCCCCCCccchHHHHHHHHhCCCcEEe
Q 023663 17 IVGT-GGDGANTVNISTGASILAAACGAKVAK 47 (279)
Q Consensus 17 ~~gt-ggdG~~t~nis~~aA~vlA~~G~~V~k 47 (279)
++++ ||.||.| ++.-.|..+|+.|.+|..
T Consensus 6 v~s~kgGvGKTt--~a~nLa~~la~~G~rVll 35 (224)
T 1byi_A 6 VTGTDTEVGKTV--ASCALLQAAKAAGYRTAG 35 (224)
T ss_dssp EEESSTTSCHHH--HHHHHHHHHHHTTCCEEE
T ss_pred EEECCCCCCHHH--HHHHHHHHHHHCCCCEEE
Confidence 5565 7888886 577778888999999986
No 33
>1cp2_A CP2, nitrogenase iron protein; oxidoreductase; 1.93A {Clostridium pasteurianum} SCOP: c.37.1.10
Probab=31.29 E-value=19 Score=30.23 Aligned_cols=32 Identities=28% Similarity=0.373 Sum_probs=25.2
Q ss_pred eeCCCCCCCCCccchHHHHHHHHhCCCcEEeecC
Q 023663 17 IVGTGGDGANTVNISTGASILAAACGAKVAKQGS 50 (279)
Q Consensus 17 ~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~ 50 (279)
+.+-||.|+.| ++.-.|..+|..|.+|+.--.
T Consensus 6 vs~KGGvGKTT--~a~nLA~~la~~G~~VlliD~ 37 (269)
T 1cp2_A 6 IYGKGGIGKST--TTQNLTSGLHAMGKTIMVVGC 37 (269)
T ss_dssp EEECTTSSHHH--HHHHHHHHHHTTTCCEEEEEE
T ss_pred EecCCCCcHHH--HHHHHHHHHHHCCCcEEEEcC
Confidence 45789999997 566777888899999997433
No 34
>2woj_A ATPase GET3; tail-anchored, membrane protein, targeting factor, endoplasmic reticulum, TRC40, ATP-binding, golgi apparatus; HET: ADP; 1.99A {Saccharomyces cerevisiae} PDB: 3h84_A 3zs8_A 3zs9_A* 3sja_A 3sjb_A 3sjc_A 3sjd_A* 3idq_A 3a36_A 3a37_A*
Probab=30.93 E-value=18 Score=32.57 Aligned_cols=34 Identities=24% Similarity=0.255 Sum_probs=27.9
Q ss_pred eeCCCCCCCCCccchHHHHHHHH--hCCCcEEeecCCC
Q 023663 17 IVGTGGDGANTVNISTGASILAA--ACGAKVAKQGSRS 52 (279)
Q Consensus 17 ~~gtggdG~~t~nis~~aA~vlA--~~G~~V~kHG~~~ 52 (279)
+.|-||.|+.| ++...|..+| ..|.+|+.--.+-
T Consensus 23 ~sgKGGvGKTT--vaanLA~~lA~~~~G~rVLLvD~D~ 58 (354)
T 2woj_A 23 VGGKGGVGKTT--SSCSIAIQMALSQPNKQFLLISTDP 58 (354)
T ss_dssp EEESTTSSHHH--HHHHHHHHHHHHCTTSCEEEEECCS
T ss_pred EeCCCCCcHHH--HHHHHHHHHHHhcCCCeEEEEECCC
Confidence 56789999997 6888888899 9999999865553
No 35
>3io3_A DEHA2D07832P; chaperone, membrane traffic, ATPase; HET: ADP; 1.80A {Debaryomyces hansenii}
Probab=29.30 E-value=32 Score=30.92 Aligned_cols=46 Identities=20% Similarity=0.232 Sum_probs=34.1
Q ss_pred CcceeeCCCCCCCCCccchHHHHHHHH--hCCCcEEeecCCCCCCcccHHHHH
Q 023663 13 DAVDIVGTGGDGANTVNISTGASILAA--ACGAKVAKQGSRSSSSACGSADVL 63 (279)
Q Consensus 13 ~~~D~~gtggdG~~t~nis~~aA~vlA--~~G~~V~kHG~~~~~~~~Gs~dvL 63 (279)
.++=+.|-||.|+.| ++...|..+| ..|.+|+.-..+ +.....+.|
T Consensus 19 ~i~~~~gkGGvGKTt--~a~~lA~~la~~~~g~~vllid~D---~~~~l~~~~ 66 (348)
T 3io3_A 19 KWIFVGGKGGVGKTT--TSSSVAVQLALAQPNEQFLLISTD---PAHNLSDAF 66 (348)
T ss_dssp SEEEEECSTTSSHHH--HHHHHHHHHHHHCTTSCEEEEECC---SSCHHHHHH
T ss_pred EEEEEeCCCCCcHHH--HHHHHHHHHHHhcCCCeEEEEECC---CCCChHHHh
Confidence 345467889999997 6777788888 899999998876 233445544
No 36
>3kc2_A Uncharacterized protein YKR070W; HAD-like, mitochondral protein, PSI, MCSG, structural genomi protein structure initiative; HET: MSE; 1.55A {Saccharomyces cerevisiae} PDB: 3rf6_A*
Probab=29.05 E-value=46 Score=29.91 Aligned_cols=59 Identities=17% Similarity=0.059 Sum_probs=41.1
Q ss_pred CcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHH-HcCCCCC
Q 023663 13 DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLE-ALGVVID 71 (279)
Q Consensus 13 ~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe-~LGi~~~ 71 (279)
-++|+-||=++|...++=..-+--.|.+.|++++.--|.+..+..-..+.|. .||+++.
T Consensus 16 ~l~D~DGvl~~g~~~~p~a~~~l~~l~~~g~~~~~vTNn~~~~~~~~~~~l~~~lgi~~~ 75 (352)
T 3kc2_A 16 FAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVS 75 (352)
T ss_dssp EEECCBTTTEETTEECTTHHHHHHHHHHTTCCEEEECSCCSSCHHHHHHHHHHHHTSCCC
T ss_pred EEEECCCeeEcCCeeCcCHHHHHHHHHHCCCEEEEEeCCCCCCchHHHHHHHHhcCCCCC
Confidence 3689999999988855543334445678899999877776444444566666 7999754
No 37
>2ho4_A Haloacid dehalogenase-like hydrolase domain containing 2; HDHD2, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; 2.20A {Mus musculus} PDB: 3hlt_A
Probab=28.91 E-value=75 Score=25.73 Aligned_cols=58 Identities=19% Similarity=0.035 Sum_probs=37.0
Q ss_pred cceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCCC
Q 023663 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (279)
Q Consensus 14 ~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~~ 71 (279)
+.|+-||=.|+.+.++-..-+--.+.+.|++++...++.-.+.....+.|+.+|++..
T Consensus 11 ~fDlDGTLld~~~~~~~~~~ai~~l~~~G~~~~~~t~~~~~~~~~~~~~l~~~g~~~~ 68 (259)
T 2ho4_A 11 LVDLNGTLHIEDAAVPGAQEALKRLRATSVMVRFVTNTTKETKKDLLERLKKLEFEIS 68 (259)
T ss_dssp EEESSSSSCC---CCTTHHHHHHHHHTSSCEEEEEECCSSCCHHHHHHHHHHTTCCCC
T ss_pred EEeCcCcEEeCCEeCcCHHHHHHHHHHCCCeEEEEeCCCCcCHHHHHHHHHHcCCCcc
Confidence 5788888887776544333333456788999987666554444456778888898754
No 38
>1zjj_A Hypothetical protein PH1952; alpha/beta hydrolase fold, HAD superfamily, structural genom riken structural genomics/proteomics initiative; 1.85A {Pyrococcus horikoshii}
Probab=28.31 E-value=38 Score=28.18 Aligned_cols=57 Identities=14% Similarity=0.066 Sum_probs=37.7
Q ss_pred cceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCC
Q 023663 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVI 70 (279)
Q Consensus 14 ~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~ 70 (279)
++|+-||=.++...++-+.-+---+.+.|++++.-.||+..+.....+-|+.+|++.
T Consensus 5 ~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~T~r~~~~~~~~~~~l~~lg~~~ 61 (263)
T 1zjj_A 5 IFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDV 61 (263)
T ss_dssp EEECBTTTEETTEECTTHHHHHHHHHHHTCCEEEEESCCSSCHHHHHHHHHTTTCCC
T ss_pred EEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHCCCCC
Confidence 468888877776644433223334456799999888887655555566677789874
No 39
>3ovg_A Amidohydrolase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, NYSGXRC, HAD, PSI; HET: KCX; 2.06A {Mycoplasma synoviae} PDB: 3msr_A*
Probab=27.98 E-value=53 Score=29.69 Aligned_cols=72 Identities=15% Similarity=0.166 Sum_probs=42.7
Q ss_pred CcceeeCCCCCCCC--CccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCC----------CCCHHHHHHH
Q 023663 13 DAVDIVGTGGDGAN--TVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVI----------DLDPEGVRRC 80 (279)
Q Consensus 13 ~~~D~~gtggdG~~--t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~----------~~s~~~~~~~ 80 (279)
.+| .||+++++-+ +.-+.-..+-+....|.||..|-.++-... -..++|+.-|++. ..+++++.+.
T Consensus 152 G~i-kig~s~~~~t~~Q~~~f~aq~~~A~e~glPViiH~r~gr~a~-d~l~iL~e~g~~~~~vvi~H~~~~~~~~~a~~~ 229 (363)
T 3ovg_A 152 GII-KAGTGYGAIDRLELKALEVAARTSILTGCPILVHTQLGTMAL-EVAKHLIGFGANPDKIQISHLNKNPDKYYYEKV 229 (363)
T ss_dssp CEE-EEEEEETBEEHHHHHHHHHHHHHHHHHCCCEEEEEETTCSHH-HHHHHHHHHTCCGGGEEEECGGGSCCHHHHHHH
T ss_pred CEE-EEEeCCCCCCHHHHHHHHHHHHHHHHhCCEEEEeCCCCCCHH-HHHHHHHhcCCCCCcEEEEcCCCCCCHHHHHHH
Confidence 345 4666664332 333566677777778999999976532111 2456666657652 2356666666
Q ss_pred HHhcCe
Q 023663 81 VDEAGI 86 (279)
Q Consensus 81 l~~~g~ 86 (279)
+++.|+
T Consensus 230 l~~~G~ 235 (363)
T 3ovg_A 230 IKETGV 235 (363)
T ss_dssp HHHHCC
T ss_pred HHHCCc
Confidence 645564
No 40
>2afh_E Nitrogenase iron protein 1; nitrogen fixation, iron-sulfur, metal-binding, molybdenum, oxidoreductase; HET: HCA CFN CLF PGE PG4 P6G 1PE; 2.10A {Azotobacter vinelandii} SCOP: c.37.1.10 PDB: 1g1m_A 1g5p_A 1m1y_E* 1m34_E* 1n2c_E* 1nip_A* 1fp6_A* 2afi_E* 2afk_E* 2nip_A 1de0_A 1xcp_A* 1xdb_A 1xd8_A 1xd9_A* 1g20_E* 1g21_E* 2c8v_A* 1rw4_A
Probab=27.13 E-value=24 Score=30.10 Aligned_cols=30 Identities=33% Similarity=0.385 Sum_probs=24.2
Q ss_pred eeCCCCCCCCCccchHHHHHHHHhCCCcEEee
Q 023663 17 IVGTGGDGANTVNISTGASILAAACGAKVAKQ 48 (279)
Q Consensus 17 ~~gtggdG~~t~nis~~aA~vlA~~G~~V~kH 48 (279)
+.+-||.|+.| ++.-.|..+|..|.+|+.-
T Consensus 7 vs~KGGvGKTT--~a~nLA~~La~~G~rVlli 36 (289)
T 2afh_E 7 IYGKGGIGKST--TTQNLVAALAEMGKKVMIV 36 (289)
T ss_dssp EEECTTSSHHH--HHHHHHHHHHHTTCCEEEE
T ss_pred EeCCCcCcHHH--HHHHHHHHHHHCCCeEEEE
Confidence 45789999997 5667778888899999964
No 41
>3pf6_A Hypothetical protein PP-LUZ7_GP033; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.60A {Pseudomonas phage LUZ7}
Probab=26.52 E-value=57 Score=21.15 Aligned_cols=34 Identities=12% Similarity=0.112 Sum_probs=26.5
Q ss_pred CCCHHHHHHHHHHHHHccHHHHHHHHHHHHhhhh
Q 023663 242 VNTLAEGVALAREIQLSGKALNTLDLWIEVSKHL 275 (279)
Q Consensus 242 ~~~~~eg~~~A~~~l~sG~a~~~l~~~~~~~~~~ 275 (279)
..|.+|+++.|+-++-.|+--+..+.+..+.|-+
T Consensus 19 h~s~k~aleear~l~pggshhdfmra~mgyhntl 52 (62)
T 3pf6_A 19 HPSTKDALEEARLLFPGGTHHDFMRALMGYHNTL 52 (62)
T ss_dssp CSSHHHHHHHHHHHSCSSCHHHHHHHHHHHHHHH
T ss_pred CccHHHHHHHHHHhCCCCchHHHHHHHHhhhHHH
Confidence 3578888888888888888888888877776654
No 42
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=26.11 E-value=2.7e+02 Score=23.92 Aligned_cols=83 Identities=13% Similarity=0.127 Sum_probs=50.7
Q ss_pred CCcceeeCCCCCCCCCccchHHHHHHHH-hCCCcEEeecCCCCCCcccHHHHHHH----cCCCC--CCCHHHHHHH---H
Q 023663 12 GDAVDIVGTGGDGANTVNISTGASILAA-ACGAKVAKQGSRSSSSACGSADVLEA----LGVVI--DLDPEGVRRC---V 81 (279)
Q Consensus 12 ~~~~D~~gtggdG~~t~nis~~aA~vlA-~~G~~V~kHG~~~~~~~~Gs~dvLe~----LGi~~--~~s~~~~~~~---l 81 (279)
+.++=++|.+|.|+.| .....|..++ ..|.+|..-+.+. .+.+..+-|+. +|+++ ..++.+.... +
T Consensus 105 g~vi~lvG~~GsGKTT--l~~~LA~~l~~~~G~~V~lv~~D~--~r~~a~eqL~~~~~~~gl~~~~~~~~~~l~~al~~~ 180 (296)
T 2px0_A 105 SKYIVLFGSTGAGKTT--TLAKLAAISMLEKHKKIAFITTDT--YRIAAVEQLKTYAELLQAPLEVCYTKEEFQQAKELF 180 (296)
T ss_dssp SSEEEEEESTTSSHHH--HHHHHHHHHHHTTCCCEEEEECCC--SSTTHHHHHHHHHTTTTCCCCBCSSHHHHHHHHHHG
T ss_pred CcEEEEECCCCCCHHH--HHHHHHHHHHHhcCCEEEEEecCc--ccchHHHHHHHHHHhcCCCeEecCCHHHHHHHHHHh
Confidence 4567789999999885 2333344445 4799998877654 34455544444 46655 2345444433 3
Q ss_pred HhcCeEEEeCCccChhh
Q 023663 82 DEAGIGFMMSTKYHPAM 98 (279)
Q Consensus 82 ~~~g~~fl~~~~~~P~l 98 (279)
....+.++..+-..|..
T Consensus 181 ~~~dlvIiDT~G~~~~~ 197 (296)
T 2px0_A 181 SEYDHVFVDTAGRNFKD 197 (296)
T ss_dssp GGSSEEEEECCCCCTTS
T ss_pred cCCCEEEEeCCCCChhh
Confidence 56678888876665543
No 43
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=26.10 E-value=43 Score=22.94 Aligned_cols=36 Identities=25% Similarity=0.462 Sum_probs=28.4
Q ss_pred cccHHHHHHHcCCCCCCCHHHHHHHHHhcCeEEEeCCccChh
Q 023663 56 ACGSADVLEALGVVIDLDPEGVRRCVDEAGIGFMMSTKYHPA 97 (279)
Q Consensus 56 ~~Gs~dvLe~LGi~~~~s~~~~~~~l~~~g~~fl~~~~~~P~ 97 (279)
..+..|.++-||++...+.+++.+...+. +..|||-
T Consensus 5 ~~~~~~~y~iLgv~~~as~~eIk~ayr~l------~~~~HPD 40 (82)
T 2ej7_A 5 SSGMVDYYEVLDVPRQASSEAIKKAYRKL------ALKWHPD 40 (82)
T ss_dssp CSSSCCHHHHTTCCTTCCHHHHHHHHHHH------HTTSCTT
T ss_pred CCCCcCHHHHcCCCCCCCHHHHHHHHHHH------HHHHCcC
Confidence 44567899999999999999999988875 3455554
No 44
>3gtx_A Organophosphorus hydrolase; mutant, amidohydrolase, alpha-beta barrel; HET: KCX; 1.62A {Deinococcus radiodurans} PDB: 2zc1_A* 3gti_A* 3gu9_A* 3gtf_A* 3gth_A* 3gu2_A* 3gu1_A* 3fdk_A* 3htw_A*
Probab=25.44 E-value=1.8e+02 Score=25.74 Aligned_cols=68 Identities=15% Similarity=0.224 Sum_probs=41.7
Q ss_pred cceeeCCCCCCCC--CccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCC----------CCCHHHHHHHH
Q 023663 14 AVDIVGTGGDGAN--TVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVI----------DLDPEGVRRCV 81 (279)
Q Consensus 14 ~~D~~gtggdG~~--t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~----------~~s~~~~~~~l 81 (279)
+| -+|..|.... ..-+.-..+-++...|.||..|-.++-... -..++|+..|++. ..+++++.+.+
T Consensus 157 ~I-Eigld~~~~~~~q~~~f~aq~~lA~~~glPViiH~~~gr~a~-~~~~iL~~~~~~~~~~vi~H~~~~~~~e~a~~~l 234 (339)
T 3gtx_A 157 VI-KLASSRDAITPYEQLFFRAAARVQRETGVPIITHTQEGQQGP-QQAELLTSLGADPARIMIGHMDGNTDPAYHRETL 234 (339)
T ss_dssp EE-EEECCSSCCCHHHHHHHHHHHHHHHHHCCCEEEECSTTCCHH-HHHHHHHHTTCCGGGEEECCGGGCCCHHHHHHHH
T ss_pred eE-EEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCcCHH-HHHHHHHHcCCCcccEEEEccCCCCCHHHHHHHH
Confidence 34 5677765333 444566667777778999999987652221 2567777766642 24566666666
Q ss_pred Hh
Q 023663 82 DE 83 (279)
Q Consensus 82 ~~ 83 (279)
+.
T Consensus 235 ~~ 236 (339)
T 3gtx_A 235 RH 236 (339)
T ss_dssp TT
T ss_pred Hc
Confidence 53
No 45
>2gdt_A Leader protein; P65 homolog; NSP1 (EC 3.4.22.-); beta-barrel, alpha-beta, replicase, structural genomics, PSI-2, protein structure initiative; NMR {Sars coronavirus} SCOP: d.346.1.1 PDB: 2hsx_A
Probab=25.08 E-value=32 Score=25.60 Aligned_cols=22 Identities=23% Similarity=0.203 Sum_probs=18.9
Q ss_pred cccCCCHHHHHHHHHHHHHccH
Q 023663 239 SCKVNTLAEGVALAREIQLSGK 260 (279)
Q Consensus 239 ~g~~~~~~eg~~~A~~~l~sG~ 260 (279)
.|...++|||++.|++.+..|+
T Consensus 18 ~gw~~~~EeALe~ar~~L~~g~ 39 (116)
T 2gdt_A 18 RGFGDSVEEALSEAREHLKNGT 39 (116)
T ss_dssp CCSCSSHHHHHHHHHHHHHHTC
T ss_pred cCCCCCHHHHHHHHHHHhhcCC
Confidence 4667789999999999999885
No 46
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=24.89 E-value=28 Score=27.60 Aligned_cols=31 Identities=19% Similarity=0.282 Sum_probs=24.2
Q ss_pred CCCCCCCCCccchHHHHHHHHhCCCcEEeecCC
Q 023663 19 GTGGDGANTVNISTGASILAAACGAKVAKQGSR 51 (279)
Q Consensus 19 gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~ 51 (279)
+.||.|+.| ++...|..+|..|.+|+.--.+
T Consensus 9 ~kgG~GKTt--~a~~la~~la~~g~~vlliD~D 39 (206)
T 4dzz_A 9 PKGGSGKTT--AVINIATALSRSGYNIAVVDTD 39 (206)
T ss_dssp SSTTSSHHH--HHHHHHHHHHHTTCCEEEEECC
T ss_pred CCCCccHHH--HHHHHHHHHHHCCCeEEEEECC
Confidence 458889887 5677788888999999976544
No 47
>2dcl_A Hypothetical UPF0166 protein PH1503; hexamer, structural genomics, NPPSFA, national project on PR structural and functional analyses; HET: AMP; 2.28A {Pyrococcus horikoshii}
Probab=24.81 E-value=77 Score=24.23 Aligned_cols=29 Identities=21% Similarity=0.323 Sum_probs=25.0
Q ss_pred ChhhHHHHHHHHHHcCCCeEEEEec-CCcc
Q 023663 135 NENLVLKMANALQRFGLKRALVVHS-EGLD 163 (279)
Q Consensus 135 h~~~~~~~~~~~~~lG~~~alvv~G-eG~d 163 (279)
++++.+.+.+.++..|...+.|++| +|.-
T Consensus 24 g~pL~~~Iv~~a~~~GiaGaTV~rgi~GfG 53 (127)
T 2dcl_A 24 GRPLYKVIVEKLREMGIAGATVYRGIYGFG 53 (127)
T ss_dssp TEEHHHHHHHHHHHTTCSCEEEEECSEEEC
T ss_pred CcCHHHHHHHHHHHCCCCeEEEEcCcEEEC
Confidence 6778888999999999999999998 7753
No 48
>3pdw_A Uncharacterized hydrolase YUTF; structural genomics, PSI2, NYSGXRC, protein structure initia YORK SGX research center for structural genomics; 1.60A {Bacillus subtilis} SCOP: c.108.1.0
Probab=24.75 E-value=35 Score=28.29 Aligned_cols=58 Identities=17% Similarity=0.117 Sum_probs=38.9
Q ss_pred cceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCCC
Q 023663 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (279)
Q Consensus 14 ~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~~ 71 (279)
++|+-||=.|+.+.++-+.-+---+.+.|++|+.--||+.-+..+..+.|+.+|+++.
T Consensus 10 ~~DlDGTLl~~~~~~~~~~~ai~~l~~~Gi~v~laTgrs~r~~~~~~~~l~~lg~~~~ 67 (266)
T 3pdw_A 10 LIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSFDIPAT 67 (266)
T ss_dssp EEECSSSTTCHHHHHHHHHHHHHHHHHTTCCEEEEESCCSSCHHHHHHHHHHTTCCCC
T ss_pred EEeCcCceEeCCEeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCC
Confidence 5788888766644322222233345568999998877765566678889999999754
No 49
>1vjr_A 4-nitrophenylphosphatase; TM1742, structural genomics, JCSG, protein structure initiative, joint center for structural G hydrolase; 2.40A {Thermotoga maritima} SCOP: c.108.1.14 PDB: 1pw5_A*
Probab=24.58 E-value=65 Score=26.53 Aligned_cols=58 Identities=17% Similarity=-0.038 Sum_probs=38.8
Q ss_pred CcceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCC
Q 023663 13 DAVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVI 70 (279)
Q Consensus 13 ~~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~ 70 (279)
-++|+-||=.|+.+-.+-+.-+.--+...|++++.-.|++--+.....+.++.+|++.
T Consensus 20 v~~DlDGTLl~~~~~~~~~~~~l~~l~~~G~~~~~aTn~~gr~~~~~~~~~~~lg~~~ 77 (271)
T 1vjr_A 20 FILDMDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNMGVDV 77 (271)
T ss_dssp EEECCBTTTEETTEECTTHHHHHHHHHHTTCEEEEEESCTTSCHHHHHHHHHHTTCCC
T ss_pred EEEcCcCcEEeCCEECcCHHHHHHHHHHcCCeEEEEECCCCCCHHHHHHHHHHcCCCC
Confidence 4688889877774422222222223678899999888775444556788899999875
No 50
>1yv9_A Hydrolase, haloacid dehalogenase family; hypothetical protein, struc genomics, PSI, protein structure initiative; 2.80A {Enterococcus faecalis} SCOP: c.108.1.14
Probab=24.56 E-value=78 Score=25.97 Aligned_cols=57 Identities=12% Similarity=0.021 Sum_probs=35.2
Q ss_pred cceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHH-cCCCC
Q 023663 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEA-LGVVI 70 (279)
Q Consensus 14 ~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~-LGi~~ 70 (279)
+.|+-||=.|+...++-..-+--.+.+.|+++..--++...+.....+.|.. +|++.
T Consensus 9 ~fDlDGTL~~~~~~~~~~~~~l~~l~~~g~~~~~~t~~~~~~~~~~~~~l~~~~g~~~ 66 (264)
T 1yv9_A 9 LIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHV 66 (264)
T ss_dssp EECCBTTTEETTEECHHHHHHHHHHHHTTCCEEEEECCCSSCHHHHHHHHHHHSCCCC
T ss_pred EEeCCCeEEeCCEECcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHhcCCCC
Confidence 5788888887666543221222346688999987777665444334444445 88875
No 51
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=22.86 E-value=33 Score=28.78 Aligned_cols=35 Identities=26% Similarity=0.415 Sum_probs=25.0
Q ss_pred cceee-CCCCCCCCCccchHHHHHHHHhCCCcEEeecC
Q 023663 14 AVDIV-GTGGDGANTVNISTGASILAAACGAKVAKQGS 50 (279)
Q Consensus 14 ~~D~~-gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~ 50 (279)
+|=++ +-||.|+.| ++...|..+|..|.+|+.--.
T Consensus 20 vI~v~s~kGGvGKTT--~a~nLA~~la~~G~~VlliD~ 55 (262)
T 2ph1_A 20 RIAVMSGKGGVGKST--VTALLAVHYARQGKKVGILDA 55 (262)
T ss_dssp EEEEECSSSCTTHHH--HHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEEEcCCCCCCHHH--HHHHHHHHHHHCCCeEEEEeC
Confidence 34344 458888887 566678888899999987443
No 52
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=22.41 E-value=35 Score=28.20 Aligned_cols=30 Identities=30% Similarity=0.273 Sum_probs=22.9
Q ss_pred CCCCCCCCCccchHHHHHHHHhCCCcEEeecC
Q 023663 19 GTGGDGANTVNISTGASILAAACGAKVAKQGS 50 (279)
Q Consensus 19 gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~ 50 (279)
+.||.|+.| ++...|..+|..|.+|+.--.
T Consensus 10 ~kgGvGKTt--~a~~LA~~la~~g~~VlliD~ 39 (260)
T 3q9l_A 10 GKGGVGKTT--SSAAIATGLAQKGKKTVVIDF 39 (260)
T ss_dssp SSTTSSHHH--HHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCCcHHH--HHHHHHHHHHhCCCcEEEEEC
Confidence 448888886 566777888899999997433
No 53
>1j3m_A The conserved hypothetical protein TT1751; X-RAY crystallography, structural genomics, riken structural genomics/proteomics initiative; 2.00A {Thermus thermophilus} SCOP: d.129.7.1
Probab=22.07 E-value=97 Score=23.16 Aligned_cols=62 Identities=23% Similarity=0.432 Sum_probs=41.8
Q ss_pred CCCCHHHHHHHHHhcCeEEEeCCccChhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHc
Q 023663 70 IDLDPEGVRRCVDEAGIGFMMSTKYHPAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRF 149 (279)
Q Consensus 70 ~~~s~~~~~~~l~~~g~~fl~~~~~~P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~l 149 (279)
++.+.+.+++.+++.||..+..-++.. .+++++|+. .+++.++++.+|.+...+-+.-...
T Consensus 12 ~~e~~~~l~~al~~~Gf~v~~~id~~~------~l~~k~g~~-------------~~~~~il~~cnP~~a~~~l~~~p~~ 72 (129)
T 1j3m_A 12 LAEARAQVEAALKEEGFGILTEIDVAA------TLKAKLGLE-------------KPPYLILGACNPNLAARALEALPEI 72 (129)
T ss_dssp HHHHHHHHHHHHHHTTCEEEEEEEHHH------HHHHHHCCC-------------CCCEEEEEEECHHHHHHHHHHCGGG
T ss_pred HHHHHHHHHHHHHHCCCEEEEEeCHHH------HHHHhcCCC-------------CCCeEEEEECCHHHHHHHHHhCHHH
Confidence 344456788889999999877533322 345666642 1468899999999987766554444
Q ss_pred C
Q 023663 150 G 150 (279)
Q Consensus 150 G 150 (279)
|
T Consensus 73 g 73 (129)
T 1j3m_A 73 G 73 (129)
T ss_dssp G
T ss_pred H
Confidence 3
No 54
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=22.00 E-value=4.6e+02 Score=24.03 Aligned_cols=135 Identities=13% Similarity=0.060 Sum_probs=77.1
Q ss_pred ceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCC---------CC--cccHHHHHHHc----CCCCCCCHHHHHH
Q 023663 15 VDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSS---------SS--ACGSADVLEAL----GVVIDLDPEGVRR 79 (279)
Q Consensus 15 ~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~---------~~--~~Gs~dvLe~L----Gi~~~~s~~~~~~ 79 (279)
+-+.|+|| |-++.|..+|..|++|....-+.. .+ --|..++++.. ++.++.++++
T Consensus 11 ~~vIGlG~-------vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~ttd~~e--- 80 (446)
T 4a7p_A 11 IAMIGTGY-------VGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFTTDLAE--- 80 (446)
T ss_dssp EEEECCSH-------HHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHH---
T ss_pred EEEEcCCH-------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEECCHHH---
Confidence 56789998 677889999999999987654321 11 12445555442 2455555554
Q ss_pred HHHhcCeEEEeCCccC---hhhhchHHHHhhhCCCChhhhhhhccCCCCCCceEEEeeChhhHHHHHHHHHHcCC-CeEE
Q 023663 80 CVDEAGIGFMMSTKYH---PAMKFVRPVRKKLKVKTVFNILGPMLNPACVPFAVVGVYNENLVLKMANALQRFGL-KRAL 155 (279)
Q Consensus 80 ~l~~~g~~fl~~~~~~---P~l~~l~~lR~~lg~Rt~~n~l~~LlNP~~~~~~v~Gv~h~~~~~~~~~~~~~lG~-~~al 155 (279)
.++...+.|+..|.=. -.--++-.+|.. ...+.+.++|-. -....+-..|...+.+.+.++..+. ...-
T Consensus 81 a~~~aDvvii~Vptp~~~~~~~~Dl~~v~~v------~~~i~~~l~~g~-iVV~~STv~pgtt~~l~~~l~e~~~~~d~~ 153 (446)
T 4a7p_A 81 GVKDADAVFIAVGTPSRRGDGHADLSYVFAA------AREIAENLTKPS-VIVTKSTVPVGTGDEVERIIAEVAPNSGAK 153 (446)
T ss_dssp HHTTCSEEEECCCCCBCTTTCCBCTHHHHHH------HHHHHHSCCSCC-EEEECSCCCTTHHHHHHHHHHHHSTTSCCE
T ss_pred HHhcCCEEEEEcCCCCccccCCccHHHHHHH------HHHHHHhcCCCC-EEEEeCCCCchHHHHHHHHHHHhCCCCCce
Confidence 3567788888754321 011123334432 245556665521 1112233467778888888776542 2456
Q ss_pred EEec-CCccccc
Q 023663 156 VVHS-EGLDEMS 166 (279)
Q Consensus 156 vv~G-eG~dE~s 166 (279)
|+.| |...|-+
T Consensus 154 v~~~Pe~a~eG~ 165 (446)
T 4a7p_A 154 VVSNPEFLREGA 165 (446)
T ss_dssp EEECCCCCCTTS
T ss_pred EEeCcccccccc
Confidence 6777 6666554
No 55
>2hx1_A Predicted sugar phosphatases of the HAD superfamily; ZP_00311070.1, possible sugar phosphatase, structural genomics; HET: MSE EPE; 2.10A {Cytophaga hutchinsonii}
Probab=21.67 E-value=71 Score=26.72 Aligned_cols=56 Identities=18% Similarity=0.018 Sum_probs=39.5
Q ss_pred cceeeCCCCCCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCC
Q 023663 14 AVDIVGTGGDGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVV 69 (279)
Q Consensus 14 ~~D~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~ 69 (279)
++|+-||=+|+...++-+.-+---+.+.|++++.--|++..+.....+.++.+|++
T Consensus 18 ~~D~DGtL~~~~~~~~~~~~~l~~l~~~g~~~~~~Tn~~~r~~~~~~~~l~~lg~~ 73 (284)
T 2hx1_A 18 FFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSYHKLGLF 73 (284)
T ss_dssp EECSBTTTEETTEECTTHHHHHHHHHHTTCEEEEEECCCSSCHHHHHHHHHHTTCT
T ss_pred EEcCcCCcCcCCeeChhHHHHHHHHHHCCCEEEEEeCCCCcCHHHHHHHHHHCCcC
Confidence 68888998887664443333334456789999987776544445578889999997
No 56
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=21.15 E-value=68 Score=26.43 Aligned_cols=47 Identities=23% Similarity=0.283 Sum_probs=30.6
Q ss_pred CCCCCccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCCC
Q 023663 23 DGANTVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVID 71 (279)
Q Consensus 23 dG~~t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~~ 71 (279)
-|+.| .....|+-++..|.+|..----.-...+|-.++++.|++.+.
T Consensus 39 kGKTT--aA~GlalRA~g~G~rV~~vQF~Kg~~~~gE~~~l~~L~v~~~ 85 (196)
T 1g5t_A 39 KGKTT--AAFGTAARAVGHGKNVGVVQFIKGTWPNGERNLLEPHGVEFQ 85 (196)
T ss_dssp SCHHH--HHHHHHHHHHHTTCCEEEEESSCCSSCCHHHHHHGGGTCEEE
T ss_pred CCHHH--HHHHHHHHHHHCCCeEEEEEeeCCCCCccHHHHHHhCCcEEE
Confidence 55554 455667777788999986522111245688999999975443
No 57
>1g3q_A MIND ATPase, cell division inhibitor; alpha-beta-alpha layered, protein-ADP complex, cell cycle, hydrolase; HET: ADP; 2.00A {Pyrococcus furiosus} SCOP: c.37.1.10 PDB: 1g3r_A* 1ion_A*
Probab=20.81 E-value=40 Score=27.44 Aligned_cols=30 Identities=30% Similarity=0.494 Sum_probs=22.7
Q ss_pred CCCCCCCCCccchHHHHHHHHhCCCcEEeecC
Q 023663 19 GTGGDGANTVNISTGASILAAACGAKVAKQGS 50 (279)
Q Consensus 19 gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~ 50 (279)
+-||.|+.| ++...|..+|+.|.+|+.--.
T Consensus 10 ~kgGvGKTt--~a~~LA~~la~~g~~VlliD~ 39 (237)
T 1g3q_A 10 GKGGTGKTT--VTANLSVALGDRGRKVLAVDG 39 (237)
T ss_dssp SSTTSSHHH--HHHHHHHHHHHTTCCEEEEEC
T ss_pred CCCCCCHHH--HHHHHHHHHHhcCCeEEEEeC
Confidence 347888886 566777788899999987543
No 58
>3la6_A Tyrosine-protein kinase WZC; P-loop protein, nucleotide binding domain, walker A motif, B protein kinase, oligomerization; HET: ADP; 3.20A {Escherichia coli}
Probab=20.54 E-value=42 Score=29.03 Aligned_cols=38 Identities=8% Similarity=0.134 Sum_probs=28.0
Q ss_pred CcceeeC-CCCCCCCCccchHHHHHHHHhCCCcEEeecCCC
Q 023663 13 DAVDIVG-TGGDGANTVNISTGASILAAACGAKVAKQGSRS 52 (279)
Q Consensus 13 ~~~D~~g-tggdG~~t~nis~~aA~vlA~~G~~V~kHG~~~ 52 (279)
.+|=+.+ .||.|+.| ++...|..+|..|.+|+.--.+-
T Consensus 93 kvI~vts~kgG~GKTt--va~nLA~~lA~~G~rVLLID~D~ 131 (286)
T 3la6_A 93 NVLMMTGVSPSIGMTF--VCANLAAVISQTNKRVLLIDCDM 131 (286)
T ss_dssp CEEEEEESSSSSSHHH--HHHHHHHHHHTTTCCEEEEECCT
T ss_pred eEEEEECCCCCCcHHH--HHHHHHHHHHhCCCCEEEEeccC
Confidence 4554555 47888886 67778888899999999865543
No 59
>3ocu_A Lipoprotein E; hydrolase, outer membrane; HET: NMN; 1.35A {Haemophilus influenzae} PDB: 3ocv_A* 3ocw_A* 3ocx_A* 3ocz_A* 3ocy_A* 3sf0_A* 2hlk_A 2hll_A 3et4_A 3et5_A
Probab=20.46 E-value=83 Score=27.11 Aligned_cols=33 Identities=24% Similarity=0.253 Sum_probs=20.8
Q ss_pred HHhCCCcEEeecCCCCC-CcccHHHHHHHcCCCC
Q 023663 38 AAACGAKVAKQGSRSSS-SACGSADVLEALGVVI 70 (279)
Q Consensus 38 lA~~G~~V~kHG~~~~~-~~~Gs~dvLe~LGi~~ 70 (279)
|.+.|++|+.-.+|... .+..+.+-|+.+||+.
T Consensus 113 L~~~G~ki~ivTgR~~~~~r~~T~~~L~~lGi~~ 146 (262)
T 3ocu_A 113 VNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNG 146 (262)
T ss_dssp HHHTTEEEEEEEEEETTTTHHHHHHHHHHHTCSC
T ss_pred HHHCCCeEEEEeCCCccchHHHHHHHHHHcCcCc
Confidence 45567777766666544 4556667777777764
No 60
>1hyq_A MIND, cell division inhibitor (MIND-1); MINC, FTSZ, bacterial cell division, cell cycle; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.10
Probab=20.37 E-value=44 Score=27.72 Aligned_cols=30 Identities=30% Similarity=0.468 Sum_probs=23.0
Q ss_pred eCCCCCCCCCccchHHHHHHHHhCCCcEEeec
Q 023663 18 VGTGGDGANTVNISTGASILAAACGAKVAKQG 49 (279)
Q Consensus 18 ~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG 49 (279)
.+-||.|+.| ++...|..+|..|.+|+.--
T Consensus 9 s~kgGvGKTt--~a~~LA~~la~~g~~VlliD 38 (263)
T 1hyq_A 9 SGKGGTGKTT--ITANLGVALAQLGHDVTIVD 38 (263)
T ss_dssp ESSSCSCHHH--HHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCCCCHHH--HHHHHHHHHHhCCCcEEEEE
Confidence 4568888886 56667778888999998753
No 61
>2oze_A ORF delta'; para, walker type atpases, DNA segregation, PSM19035, plasmid, DNA binding protein; HET: AGS EPE; 1.83A {Streptococcus pyogenes}
Probab=20.37 E-value=45 Score=28.38 Aligned_cols=33 Identities=30% Similarity=0.373 Sum_probs=25.0
Q ss_pred CcceeeC---CCCCCCCCccchHHHHHHHHhCCCcEEe
Q 023663 13 DAVDIVG---TGGDGANTVNISTGASILAAACGAKVAK 47 (279)
Q Consensus 13 ~~~D~~g---tggdG~~t~nis~~aA~vlA~~G~~V~k 47 (279)
.++=+++ -||.|+.| ++...|..+|..|.+|+.
T Consensus 35 ~~i~v~~~s~KGGvGKTT--~a~nLA~~la~~G~rVll 70 (298)
T 2oze_A 35 EAIVILNNYFKGGVGKSK--LSTMFAYLTDKLNLKVLM 70 (298)
T ss_dssp SCEEEEECCSSSSSSHHH--HHHHHHHHHHHTTCCEEE
T ss_pred cEEEEEeccCCCCchHHH--HHHHHHHHHHhCCCeEEE
Confidence 3455665 69999987 566677788899999987
No 62
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=20.17 E-value=20 Score=32.70 Aligned_cols=32 Identities=28% Similarity=0.394 Sum_probs=26.7
Q ss_pred eeCCCCCCCCCccchHHHHHHHHhCCCcEEeecC
Q 023663 17 IVGTGGDGANTVNISTGASILAAACGAKVAKQGS 50 (279)
Q Consensus 17 ~~gtggdG~~t~nis~~aA~vlA~~G~~V~kHG~ 50 (279)
+.|.||.|+.| ++...|..+|..|.+|+.-..
T Consensus 7 ~~gkGG~GKTt--~a~~la~~la~~g~~vllvd~ 38 (374)
T 3igf_A 7 FLGKSGVARTK--IAIAAAKLLASQGKRVLLAGL 38 (374)
T ss_dssp EECSBHHHHHH--HHHHHHHHHHHTTCCEEEEEC
T ss_pred EeCCCCCcHHH--HHHHHHHHHHHCCCCeEEEeC
Confidence 57889999997 677788888999999987655
No 63
>3pnz_A Phosphotriesterase family protein; amidohydrolase fold; HET: KCX; 1.60A {Listeria monocytogenes serotype 4b strorganism_taxid} SCOP: c.1.9.0
Probab=20.17 E-value=1.9e+02 Score=25.51 Aligned_cols=74 Identities=18% Similarity=0.210 Sum_probs=45.3
Q ss_pred cceeeCCCCCCCC--CccchHHHHHHHHhCCCcEEeecCCCCCCcccHHHHHHHcCCCC----------CCCHHHHHHHH
Q 023663 14 AVDIVGTGGDGAN--TVNISTGASILAAACGAKVAKQGSRSSSSACGSADVLEALGVVI----------DLDPEGVRRCV 81 (279)
Q Consensus 14 ~~D~~gtggdG~~--t~nis~~aA~vlA~~G~~V~kHG~~~~~~~~Gs~dvLe~LGi~~----------~~s~~~~~~~l 81 (279)
+| -+|++|+..+ +-.+.-..+-+....|.||..|-.++- ...-..++|+..|++. ..+++++.+.+
T Consensus 152 vI-EiGld~~~~~~~q~~~f~aq~~~A~~~glPViiH~r~g~-~a~~~l~iL~e~~~~~~~vvi~H~~~s~~~e~a~~~l 229 (330)
T 3pnz_A 152 QV-KFGTGYNMITPLEEKTIRAVARAHHETKAPIHSHTEAGT-MALEQIEILKQENIPLEYLSIGHMDRNLDPYYHKQVA 229 (330)
T ss_dssp EE-EEECBTTBCCHHHHHHHHHHHHHHHHHCCCEEEECGGGC-CHHHHHHHHHHTTCCGGGEEETTGGGSCCHHHHHHHH
T ss_pred eE-EEEcCCCCCCHHHHHHHHHHHHHHHHHCCeEEEeCCCCc-ChHHHHHHHHHcCCCCCeEEEecCCCCCCHHHHHHHH
Confidence 35 5787775444 445677777777888999999976531 1122467777767652 24556666655
Q ss_pred HhcCeEEEeC
Q 023663 82 DEAGIGFMMS 91 (279)
Q Consensus 82 ~~~g~~fl~~ 91 (279)
+. |+ |+..
T Consensus 230 ~~-G~-~i~~ 237 (330)
T 3pnz_A 230 KT-GA-FMSF 237 (330)
T ss_dssp TT-TC-EEEE
T ss_pred Hc-Cc-EEEE
Confidence 53 53 4443
No 64
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=20.12 E-value=40 Score=27.50 Aligned_cols=31 Identities=19% Similarity=0.278 Sum_probs=23.9
Q ss_pred CCCCCCCCCccchHHHHHHHHhC-CCcEEeecCC
Q 023663 19 GTGGDGANTVNISTGASILAAAC-GAKVAKQGSR 51 (279)
Q Consensus 19 gtggdG~~t~nis~~aA~vlA~~-G~~V~kHG~~ 51 (279)
+-||.|+.| ++...|..+|.. |.+|+.--.+
T Consensus 12 ~kGGvGKTt--~a~~LA~~la~~~g~~VlliD~D 43 (245)
T 3ea0_A 12 AKGGDGGSC--IAANFAFALSQEPDIHVLAVDIS 43 (245)
T ss_dssp SSTTSSHHH--HHHHHHHHHTTSTTCCEEEEECC
T ss_pred CCCCcchHH--HHHHHHHHHHhCcCCCEEEEECC
Confidence 458899887 567778888998 9999975443
Done!