BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023664
(279 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q84VQ1|KINB1_ARATH SNF1-related protein kinase regulatory subunit beta-1
OS=Arabidopsis thaliana GN=KINB1 PE=1 SV=1
Length = 283
Score = 325 bits (834), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 177/290 (61%), Positives = 214/290 (73%), Gaps = 18/290 (6%)
Query: 1 MGNANGREEGGGGGGGVAGAGANDEIQINGGDHSMSN-----------ISPPATPHRSRS 49
MGNANG++E G G A ++ + NGGD S + SPP +P RS S
Sbjct: 1 MGNANGKDEDAAAGSGGADVTSSSA-RSNGGDPSARSRHRRPSSDSMSSSPPGSPARSPS 59
Query: 50 PLLFAPQVRIRVPVAPLQRADDPPLFNQMRQHESHAAASNPLEKGVPTIITWNYGGNEVA 109
P LFAPQV PVAPLQRA+ PP N ++ ++S NP E+G+PTIITWN GGN+VA
Sbjct: 60 PFLFAPQV----PVAPLQRANAPPP-NNIQWNQSQRVFDNPPEQGIPTIITWNQGGNDVA 114
Query: 110 VEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADELGGVCN 169
VEGSWDNW SR+ L +SGKDHSIL VLPSG+YHYK IVDG+ +YIPDLPFVADE+G VCN
Sbjct: 115 VEGSWDNWRSRKKLQKSGKDHSILFVLPSGIYHYKVIVDGESKYIPDLPFVADEVGNVCN 174
Query: 170 LLDVHSCVPEILDSVAEFEAPASPESSYSQALPSEEDYAKEPLTVPSQLHLTLLGTENSD 229
+LDVH+ VPE +S+ EFEAP SP+ SY Q LP+ EDYAKEPL VP QLHLTLLGT +
Sbjct: 175 ILDVHNFVPENPESIVEFEAPPSPDHSYGQTLPAAEDYAKEPLAVPPQLHLTLLGT-TEE 233
Query: 230 EASSSKPKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKPHKR 279
A ++KP+HVVLNHVF++ GW +S+VALGLTHRF+SKY+TVVLYKP R
Sbjct: 234 TAIATKPQHVVLNHVFIEQGWTPQSIVALGLTHRFESKYITVVLYKPLTR 283
>sp|Q9SCY5|KINB2_ARATH SNF1-related protein kinase regulatory subunit beta-2
OS=Arabidopsis thaliana GN=KINB2 PE=1 SV=1
Length = 289
Score = 248 bits (632), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 143/298 (47%), Positives = 186/298 (62%), Gaps = 28/298 (9%)
Query: 1 MGNANGREEGGGGGGGVAGAGANDEIQI---------NGGDH----SMSNISPPATPHRS 47
MGN N REE A A +++ +I + G+H + SPP +P +
Sbjct: 1 MGNVNAREEANSNN---ASAVEDEDAEICSREAMSAASDGNHVAPPELMGQSPPHSPRAT 57
Query: 48 RSPLLFAPQVRIRVPVAPLQRADDPPLFNQ--MRQHES-HAAASNPLEKGVPTIITWNYG 104
+SPL+FAPQV PV PLQR D+ + N M+ S + ASN E+G+PT+ITW +G
Sbjct: 58 QSPLMFAPQV----PVLPLQRPDEIHIPNPSWMQSPSSLYEEASN--EQGIPTMITWCHG 111
Query: 105 GNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADEL 164
G E+AVEGSWDNW +R L RSGKD +I+ VLPSGVY Y+FIVDG WR+ P+LP D+
Sbjct: 112 GKEIAVEGSWDNWKTRSRLQRSGKDFTIMKVLPSGVYEYRFIVDGQWRHAPELPLARDDA 171
Query: 165 GGVCNLLDVHSCVPEILDSVAEFEAPASPESSYSQALPSEEDYAKEPLTVPSQLHLTLLG 224
G N+LD+ VPE + S++ FE P SPE+SYS L EDY+KEP VP L +TLL
Sbjct: 172 GNTFNILDLQDYVPEDIQSISGFEPPQSPENSYSNLLLGAEDYSKEPPVVPPHLQMTLLN 231
Query: 225 --TENSDEASS-SKPKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKPHKR 279
N D S +P+HV+LNH+++ G SVVALG THRF +KYVTVVLYK +R
Sbjct: 232 LPAANPDIPSPLPRPQHVILNHLYMQKGKSGPSVVALGSTHRFLAKYVTVVLYKSLQR 289
>sp|O43741|AAKB2_HUMAN 5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens
GN=PRKAB2 PE=1 SV=1
Length = 272
Score = 119 bits (298), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 75/203 (36%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 89 NPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVD 148
P ++ PT+I W+ GG EV + GS++NW+++ L +S D +L LP G + YKF VD
Sbjct: 71 KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVD 130
Query: 149 GDWRYIPDLPFVADELGGVCNLLDVHSCVPEI-----LDSVAEFEA-----PASPESSYS 198
G W + P P V +LG + NL+ V E+ LDS+ E +SP Y
Sbjct: 131 GQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYG 190
Query: 199 Q---ALPSEEDYAKEPLTVPSQLHLTLLGTEN--SDEASSSKPKHVVLNHVFVDDGWKSK 253
Q A SEE + P+ P L + L N D A +P HV+LNH++
Sbjct: 191 QEMYAFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALS--IKD 248
Query: 254 SVVALGLTHRFQSKYVTVVLYKP 276
SV+ L THR++ KYVT +LYKP
Sbjct: 249 SVMVLSATHRYKKKYVTTLLYKP 271
>sp|Q9QZH4|AAKB2_RAT 5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 118 bits (296), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 89 NPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVD 148
P ++ PT+I W+ GG EV + GS++NW+++ L +S D +L LP G + YKF VD
Sbjct: 70 KPTQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVD 129
Query: 149 GDWRYIPDLPFVADELGGVCNLLDVHSCVPEI-----LDSVAEFEA-----PASPESSYS 198
G W + P P V +LG + NL+ V E+ LDS+ E +SP Y
Sbjct: 130 GQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYG 189
Query: 199 QAL---PSEEDYAKEPLTVPSQLHLTLLGTEN--SDEASSSKPKHVVLNHVFVDDGWKSK 253
Q + SEE + P+ P L + L N D A +P HV+LNH++
Sbjct: 190 QEMYVFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALS--TKD 247
Query: 254 SVVALGLTHRFQSKYVTVVLYKP 276
SV+ L THR++ KYVT +LYKP
Sbjct: 248 SVMVLSATHRYKKKYVTTLLYKP 270
>sp|Q6PAM0|AAKB2_MOUSE 5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus
GN=Prkab2 PE=1 SV=1
Length = 271
Score = 117 bits (294), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 106/203 (52%), Gaps = 17/203 (8%)
Query: 89 NPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVD 148
P ++ PT+I W+ GG EV + GS++NW+++ L +S D +L LP G + YKF VD
Sbjct: 70 KPAQQARPTVIRWSEGGKEVFISGSFNNWSTKIPLIKSHNDFVAILDLPEGEHQYKFFVD 129
Query: 149 GDWRYIPDLPFVADELGGVCNLLDVHSCVPEI-----LDSVAEFEA-----PASPESSYS 198
G W + P P V +LG + NL+ V E+ LDS+ E +SP Y
Sbjct: 130 GQWVHDPSEPVVTSQLGTINNLIHVKKSDFEVFDALKLDSMESSETSCRDLSSSPPGPYG 189
Query: 199 QAL---PSEEDYAKEPLTVPSQLHLTLLGTEN--SDEASSSKPKHVVLNHVFVDDGWKSK 253
Q + SEE + P+ P L + L N D A +P HV+LNH++
Sbjct: 190 QEMYVFRSEERFKSPPILPPHLLQVILNKDTNISCDPALLPEPNHVMLNHLYALS--IKD 247
Query: 254 SVVALGLTHRFQSKYVTVVLYKP 276
SV+ L THR++ KYVT +LYKP
Sbjct: 248 SVMVLSATHRYKKKYVTTLLYKP 270
>sp|Q9R078|AAKB1_MOUSE 5'-AMP-activated protein kinase subunit beta-1 OS=Mus musculus
GN=Prkab1 PE=1 SV=2
Length = 270
Score = 110 bits (276), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 74/213 (34%), Positives = 107/213 (50%), Gaps = 23/213 (10%)
Query: 80 QHESHAAASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSG 139
QH+ A P + PT+ W GG EV + GS++NW S+ L RS + +L LP G
Sbjct: 64 QHDLEANDKAPAQ-ARPTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSQNNFVAILDLPEG 121
Query: 140 VYHYKFIVDGDWRYIPDLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPA 191
+ YKF VDG W + P P V +LG V N++ V E+ D++ E +
Sbjct: 122 EHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSS 181
Query: 192 SPESSYSQA--LPSEEDYAKEPLTVPSQLHLTLLGTE---NSDEASSSKPKHVVLNHVF- 245
SP Y Q + E+ K P +P L +L + + D A +P HV+LNH++
Sbjct: 182 SPPGPYHQEPYMSKPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYA 241
Query: 246 --VDDGWKSKSVVALGLTHRFQSKYVTVVLYKP 276
+ DG V+ L THR++ KYVT +LYKP
Sbjct: 242 LSIKDG-----VMVLSATHRYKKKYVTTLLYKP 269
>sp|P80386|AAKB1_RAT 5'-AMP-activated protein kinase subunit beta-1 OS=Rattus norvegicus
GN=Prkab1 PE=1 SV=4
Length = 270
Score = 109 bits (272), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 106/213 (49%), Gaps = 23/213 (10%)
Query: 80 QHESHAAASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSG 139
QH+ P + PT+ W GG EV + GS++NW S+ L RS + +L LP G
Sbjct: 64 QHDLEVNEKAPAQ-ARPTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSQNNFVAILDLPEG 121
Query: 140 VYHYKFIVDGDWRYIPDLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPA 191
+ YKF VDG W + P P V +LG V N++ V E+ D++ E +
Sbjct: 122 EHQYKFFVDGQWTHDPSEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSS 181
Query: 192 SPESSYSQA--LPSEEDYAKEPLTVPSQLHLTLLGTE---NSDEASSSKPKHVVLNHVF- 245
SP Y Q + E+ K P +P L +L + + D A +P HV+LNH++
Sbjct: 182 SPPGPYHQEPYISKPEERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYA 241
Query: 246 --VDDGWKSKSVVALGLTHRFQSKYVTVVLYKP 276
+ DG V+ L THR++ KYVT +LYKP
Sbjct: 242 LSIKDG-----VMVLSATHRYKKKYVTTLLYKP 269
>sp|Q5BIS9|AAKB1_BOVIN 5'-AMP-activated protein kinase subunit beta-1 OS=Bos taurus
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 96 PTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIP 155
PT+ W GG EV + GS++NW S+ L RS + +L LP G + YKF VDG W + P
Sbjct: 79 PTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDP 137
Query: 156 DLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPASPESSYSQA--LPSEE 205
P V +LG V N++ V E+ D++ E +SP Y Q + E
Sbjct: 138 SEPVVTSQLGTVNNVIQVKKTDFEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYISKPE 197
Query: 206 DYAKEPLTVPSQLHLTLLGTE---NSDEASSSKPKHVVLNHVF---VDDGWKSKSVVALG 259
+ K P +P L +L + + D A +P HV+LNH++ + DG V+ L
Sbjct: 198 ERFKAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDG-----VMVLS 252
Query: 260 LTHRFQSKYVTVVLYKP 276
THR++ KYVT +LYKP
Sbjct: 253 ATHRYKKKYVTTLLYKP 269
>sp|Q5R801|AAKB1_PONAB 5'-AMP-activated protein kinase subunit beta-1 OS=Pongo abelii
GN=PRKAB1 PE=2 SV=3
Length = 270
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 70/197 (35%), Positives = 99/197 (50%), Gaps = 22/197 (11%)
Query: 96 PTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIP 155
PT+ W GG EV + GS++NW S+ L RS + +L LP G + YKF VDG W + P
Sbjct: 79 PTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDP 137
Query: 156 DLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPASPESSYSQ---ALPSE 204
P V +LG V N++ V E+ D++ E +SP Y Q E
Sbjct: 138 SEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPE 197
Query: 205 EDYAKEPLTVPSQLHLTLLGTE--NSDEASSSKPKHVVLNHVF---VDDGWKSKSVVALG 259
E + P+ P L + L + D A +P HV+LNH++ + DG V+ L
Sbjct: 198 ERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDG-----VMVLS 252
Query: 260 LTHRFQSKYVTVVLYKP 276
THR++ KYVT +LYKP
Sbjct: 253 ATHRYKKKYVTTLLYKP 269
>sp|Q9Y478|AAKB1_HUMAN 5'-AMP-activated protein kinase subunit beta-1 OS=Homo sapiens
GN=PRKAB1 PE=1 SV=4
Length = 270
Score = 107 bits (266), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/197 (35%), Positives = 101/197 (51%), Gaps = 22/197 (11%)
Query: 96 PTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIP 155
PT+ W GG EV + GS++NW S+ L RS + +L LP G + YKF VDG W + P
Sbjct: 79 PTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDLPEGEHQYKFFVDGQWTHDP 137
Query: 156 DLPFVADELGGVCNLLDVHSCVPEILDSVA--------EFEAPASPESSYSQA--LPSEE 205
P V +LG V N++ V E+ D++ E +SP Y Q + E
Sbjct: 138 SEPIVTSQLGTVNNIIQVKKTDFEVFDALMVDSQKCSDVSELSSSPPGPYHQEPYVCKPE 197
Query: 206 DYAKEPLTVPSQLHLTLLGTE---NSDEASSSKPKHVVLNHVF---VDDGWKSKSVVALG 259
+ + P +P L +L + + D A +P HV+LNH++ + DG V+ L
Sbjct: 198 ERFRAPPILPPHLLQVILNKDTGISCDPALLPEPNHVMLNHLYALSIKDG-----VMVLS 252
Query: 260 LTHRFQSKYVTVVLYKP 276
THR++ KYVT +LYKP
Sbjct: 253 ATHRYKKKYVTTLLYKP 269
>sp|Q9ZUU8|KINB3_ARATH SNF1-related protein kinase regulatory subunit beta-3
OS=Arabidopsis thaliana GN=KINB3 PE=1 SV=1
Length = 114
Score = 89.7 bits (221), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/97 (46%), Positives = 67/97 (69%), Gaps = 1/97 (1%)
Query: 183 SVAEFEAPASPESSYSQALPSEEDYAKEPLTVPSQLHLTLLGTENSDEASSSKPKHVVLN 242
+V FE P SP SSY+ S ED ++P VP L +LLG + S E + + P++VVLN
Sbjct: 13 TVVGFEVPVSPVSSYNNVYSSTEDETRDPPAVPPHLQHSLLGNQGSMELAYA-PQNVVLN 71
Query: 243 HVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKPHKR 279
H+++++ +SVVALG +HRF++K+VTVV+YKP +R
Sbjct: 72 HLYIENRDAPRSVVALGFSHRFRTKFVTVVIYKPVQR 108
>sp|P78789|YC63_SCHPO Uncharacterized protein C1919.03c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPCC1919.03c PE=1 SV=2
Length = 298
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 101/217 (46%), Gaps = 24/217 (11%)
Query: 77 QMRQHESHAAASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVL 136
Q ++H S P VPTII W GG V V GS+ W + L +S +D+++LL L
Sbjct: 84 QTSGKKTHQPYSGPC---VPTIIRWRGGGEVVYVTGSFSRWKKKIQLLKS-EDYTVLLQL 139
Query: 137 PSGVYHYKFIVDGDWRYIPDLPFVADELGGVCNLLDVH------SCVPEILDSV-AEFEA 189
G +KF+VDG W D P D G + N L+V + + E L V +
Sbjct: 140 RPGTQRFKFLVDGIWCCSSDFPTATDAEGNLYNYLEVEANEKLGASIDERLSQVHTDLPM 199
Query: 190 PASPES-SYSQALPS-------EEDYAKEPLTVPSQLHLTLLGTENS---DEASSSKPKH 238
ES YS +P+ +E +P ++P L +L + + D++ P H
Sbjct: 200 EEKSESEQYSTEIPAFLTSNTLQELKLPKPPSLPPHLEKCILNSNTAYKEDQSVLPNPNH 259
Query: 239 VVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYK 275
V+LNH+ + V+AL T R+ KYVT ++K
Sbjct: 260 VLLNHLAAAN--TQLGVLALSATTRYHRKYVTTAMFK 294
>sp|P80387|AAKB1_PIG 5'-AMP-activated protein kinase subunit beta-1 (Fragment) OS=Sus
scrofa GN=PRKAB1 PE=1 SV=1
Length = 122
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 96 PTIITWNYGGNEVAVEGSWDNWTSRRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIP 155
PT+ W GG EV + GS++NW S+ L RS + +L LP G + YKF+VDG W + P
Sbjct: 44 PTVFRWTGGGKEVYLSGSFNNW-SKLPLTRSHNNFVAILDLPEGEHQYKFLVDGQWTHDP 102
Query: 156 DLPFVADELGGVCNLLDV 173
P V +LG V N++ V
Sbjct: 103 SEPVVTSQLGTVNNIIQV 120
>sp|Q04739|GAL83_YEAST SNF1 protein kinase subunit beta-3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=GAL83 PE=1 SV=1
Length = 417
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/260 (23%), Positives = 100/260 (38%), Gaps = 84/260 (32%)
Query: 95 VPTIITWNYGGNEVAVEGSWDNWTSRRILH------RSGKDHSILLVLPSGVYHYKFIVD 148
P ITW GGN+V V GS+ W R+++ + G H + L LP G + ++FIVD
Sbjct: 162 FPVDITWQQGGNKVYVTGSFTGW--RKMIGLVPVPGQPGLMH-VKLQLPPGTHRFRFIVD 218
Query: 149 GDWRYIPDLPFVADELGGVCNLLDVHSCVP------------------------------ 178
+ R+ LP D++G N ++V S P
Sbjct: 219 NELRFSDYLPTATDQMGNFVNYMEV-SAPPDWGNEPQQHLAEKKANHVDDSKLSKRPMSA 277
Query: 179 -------------EILDSVAEF--EAPASPESSYSQALPS--------EEDYAK------ 209
++ D F E PA P Y+Q +P+ E+ Y
Sbjct: 278 RSRIALEIEKEPDDMGDGYTRFHDETPAKPNLEYTQDIPAVFTDPNVMEQYYLTLDQQQN 337
Query: 210 --------EPLTVPSQLHLTLLGTENSDEASSSK-----PKHVVLNHVFVDDGWKSKSVV 256
P +P L +L + ++ + ++ P HV+LNH+ K ++
Sbjct: 338 NHQNMAWLTPPQLPPHLENVILNSYSNAQTDNTSGALPIPNHVILNHLAT-SSIKHNTLC 396
Query: 257 ALGLTHRFQSKYVTVVLYKP 276
+ R++ KYVT +LY P
Sbjct: 397 VASIV-RYKQKYVTQILYTP 415
>sp|P34164|SIP2_YEAST SNF1 protein kinase subunit beta-2 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SIP2 PE=1 SV=3
Length = 415
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 9/86 (10%)
Query: 95 VPTIITWNYGGNEVAVEGSWDNWTSRRIL------HRSGKDHSILLVLPSGVYHYKFIVD 148
VP I W GG++V V GS+ W R+++ +G H L +LP G + ++FIVD
Sbjct: 164 VPVEIRWQQGGSKVYVTGSFTKW--RKMIGLIPDSDNNGSFHVKLRLLP-GTHRFRFIVD 220
Query: 149 GDWRYIPDLPFVADELGGVCNLLDVH 174
+ R LP D++G N ++V
Sbjct: 221 NELRVSDFLPTATDQMGNFVNYIEVR 246
Score = 33.5 bits (75), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 2/41 (4%)
Query: 236 PKHVVLNHVFVDDGWKSKSVVALGLTHRFQSKYVTVVLYKP 276
P HVVLNH+ V K ++ + R++ KYVT +LY P
Sbjct: 373 PNHVVLNHL-VTSSIKHNTLCVASIV-RYKQKYVTQILYTP 411
>sp|Q944A6|SNF4_ARATH Sucrose nonfermenting 4-like protein OS=Arabidopsis thaliana
GN=SNF4 PE=1 SV=1
Length = 487
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 45/93 (48%), Gaps = 6/93 (6%)
Query: 84 HAAASNPLEKGVPTIITWNYGGNEVAVEGSWDNWTS---RRILHRSGKDHSILLVLPSGV 140
++AAS L PT W YGG V + GS+ WT L ++ L G
Sbjct: 12 NSAASGQLL--TPTRFVWPYGGRRVFLSGSFTRWTEHVPMSPLEGCPTVFQVICNLTPGY 69
Query: 141 YHYKFIVDGDWRYIPDLPFVADELGGVCNLLDV 173
+ YKF VDG+WR+ PFV+ GGV N + +
Sbjct: 70 HQYKFFVDGEWRHDEHQPFVSGN-GGVVNTIFI 101
>sp|F4J117|LSF1_ARATH Phosphoglucan phosphatase LSF1, chloroplastic OS=Arabidopsis
thaliana GN=LSF1 PE=1 SV=1
Length = 591
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 9/96 (9%)
Query: 94 GVPT---IITWN-YGGNEVAVEGSWD-NWTS-RRILHRSGKDHSILLVLPSGVYHYKFIV 147
G PT WN + G EV + G + NW + H+ G + L G Y+YK+I+
Sbjct: 451 GTPTHSVTFVWNGHEGEEVLLVGDFTGNWKEPIKATHKGGPRFETEVRLTQGKYYYKYII 510
Query: 148 DGDWRYIPDLPFVADELGGVCNLL---DVHSCVPEI 180
+GDWR+ P D+ G N++ DV + P I
Sbjct: 511 NGDWRHSATSPTERDDRGNTNNIIVVGDVANVRPTI 546
>sp|P38845|CRP1_YEAST Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=CRP1 PE=1 SV=1
Length = 465
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|A6ZT54|CRP1_YEAS7 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7NIP0|CRP1_YEASO Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain FostersO) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|B3LSR0|CRP1_YEAS1 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|C7GJZ2|CRP1_YEAS2 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain JAY291) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7LVH4|CRP1_YEASV Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain VIN 13) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7KDM2|CRP1_YEASA Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain AWRI796) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7KPJ0|CRP1_YEASL Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain Lalvin QA23) GN=CRP1 PE=3 SV=2
Length = 465
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|C8Z9U3|CRP1_YEAS8 Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=CRP1 PE=3
SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLANKDDTFQFKFIVDGVW 68
>sp|E7Q4T7|CRP1_YEASB Cruciform DNA-recognizing protein 1 OS=Saccharomyces cerevisiae
(strain FostersB) GN=CRP1 PE=3 SV=1
Length = 465
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 99 ITWNYGGNEVAVEGSWDNWTSRRILHRSGKDH-----SILLVLPSGVYHYKFIVDGDW 151
+W G +V + G++D+W L ++ K + + L + +KFIVDG W
Sbjct: 11 FSWPAGPKDVILTGTFDDWRGTLPLVKTAKGNFEITMPVKLXNKDDTFQFKFIVDGVW 68
>sp|B3LP25|MDG1_YEAS1 Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain RM11-1a) GN=MDG1 PE=3 SV=1
Length = 366
Score = 35.0 bits (79), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 101 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 155
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 156 DLPFVADELGGVCN 169
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|P53885|MDG1_YEAST Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=MDG1 PE=1 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 101 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 155
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 156 DLPFVADELGGVCN 169
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|C8ZG55|MDG1_YEAS8 Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain Lalvin EC1118 / Prise de mousse) GN=MDG1 PE=3
SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 101 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 155
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 156 DLPFVADELGGVCN 169
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|A6ZRR2|MDG1_YEAS7 Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain YJM789) GN=MDG1 PE=3 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 101 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 155
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 156 DLPFVADELGGVCN 169
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|C7GTE8|MDG1_YEAS2 Signal transduction protein MDG1 OS=Saccharomyces cerevisiae
(strain JAY291) GN=MDG1 PE=3 SV=1
Length = 366
Score = 34.7 bits (78), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 34/74 (45%), Gaps = 7/74 (9%)
Query: 101 WNYGGNEVAVEGSWDNW--TSRRILHRSGKDHSILLVL---PSGVYHYKFIVDGDWRYIP 155
W G + + G++D+W T + SG L V PS +++KFIVDG W
Sbjct: 12 WPKGPEAIILTGTFDDWKGTLPMVKDPSGAFEITLPVTFDSPSSKFYFKFIVDGQWLPSK 71
Query: 156 DLPFVADELGGVCN 169
D DE GV N
Sbjct: 72 DYKVNIDE--GVEN 83
>sp|Q04512|HEM1_RHOS4 5-aminolevulinate synthase 1 OS=Rhodobacter sphaeroides (strain
ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=hemA PE=3
SV=1
Length = 407
Score = 33.5 bits (75), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 120 RRILHRSGKDHSILLVLPSGVYHYKFIVDGDWRYIPDLPFVADELGGVCNLLDVHS 175
RRIL GKD IL+ S VY +DGD+ I ++ +ADE G + + +VH+
Sbjct: 168 RRILTSIGKDRPILVAFES-VYS----MDGDFGRIEEICDIADEFGALKYIDEVHA 218
>sp|Q9FEB5|DSP4_ARATH Phosphoglucan phosphatase DSP4, chloroplastic OS=Arabidopsis
thaliana GN=DSP4 PE=1 SV=1
Length = 379
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 136 LPSGVYHYKFIVDGDWRYIPDLPFV 160
LP G + YK+I+DG+W + PF+
Sbjct: 299 LPEGQFEYKYIIDGEWTHNEAEPFI 323
>sp|Q96SE0|ABHD1_HUMAN Abhydrolase domain-containing protein 1 OS=Homo sapiens GN=ABHD1
PE=2 SV=2
Length = 405
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 59 IRVPVAPLQRADDPPLFNQMRQHESHAAASNPLEKGVPTIITWNYGGNEVAVEG--SWDN 116
IR+PV L ADDP F+ + AA +P V +IT GG+ +EG W +
Sbjct: 317 IRIPVLYLSAADDP--FSPVCALPIQAAQHSPY---VALLITAR-GGHIGFLEGLLPWQH 370
Query: 117 WTSRRILHRSGK 128
W R+LH+ K
Sbjct: 371 WYMSRLLHQYAK 382
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.134 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 121,222,803
Number of Sequences: 539616
Number of extensions: 5715857
Number of successful extensions: 27811
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 73
Number of HSP's that attempted gapping in prelim test: 26904
Number of HSP's gapped (non-prelim): 710
length of query: 279
length of database: 191,569,459
effective HSP length: 116
effective length of query: 163
effective length of database: 128,974,003
effective search space: 21022762489
effective search space used: 21022762489
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 60 (27.7 bits)