Query 023672
Match_columns 279
No_of_seqs 420 out of 1695
Neff 11.8
Searched_HMMs 29240
Date Mon Mar 25 10:51:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023672.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023672hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 100.0 1.2E-36 3.9E-41 240.2 27.4 207 35-279 104-313 (344)
2 3ow8_A WD repeat-containing pr 100.0 8.8E-36 3E-40 233.3 27.4 200 35-278 103-303 (321)
3 1vyh_C Platelet-activating fac 100.0 3.7E-35 1.3E-39 237.4 28.5 202 35-279 131-352 (410)
4 1vyh_C Platelet-activating fac 100.0 1.2E-34 4.2E-39 234.3 28.5 201 35-279 173-394 (410)
5 1got_B GT-beta; complex (GTP-b 100.0 5.2E-34 1.8E-38 225.2 30.0 220 35-279 78-326 (340)
6 2ynn_A Coatomer subunit beta'; 100.0 4.4E-34 1.5E-38 222.2 28.5 202 35-278 36-241 (304)
7 1nr0_A Actin interacting prote 100.0 3.8E-34 1.3E-38 242.5 30.3 224 35-279 40-338 (611)
8 3ow8_A WD repeat-containing pr 100.0 2.8E-34 9.5E-39 224.8 27.3 203 35-279 59-262 (321)
9 2ynn_A Coatomer subunit beta'; 100.0 3.6E-34 1.2E-38 222.7 27.6 204 34-278 77-283 (304)
10 4gqb_B Methylosome protein 50; 100.0 2.3E-34 8E-39 227.0 26.6 189 58-278 80-270 (344)
11 2pbi_B Guanine nucleotide-bind 100.0 6E-34 2E-38 226.0 28.9 191 55-279 149-340 (354)
12 3fm0_A Protein CIAO1; WDR39,SG 100.0 4.1E-34 1.4E-38 226.2 26.4 196 52-279 7-208 (345)
13 1got_B GT-beta; complex (GTP-b 100.0 1.7E-33 5.9E-38 222.2 28.6 190 52-279 47-240 (340)
14 4g56_B MGC81050 protein; prote 100.0 4.6E-34 1.6E-38 226.8 23.5 206 35-278 116-325 (357)
15 2pbi_B Guanine nucleotide-bind 100.0 5.5E-33 1.9E-37 220.4 28.5 207 52-279 56-298 (354)
16 3iz6_a 40S ribosomal protein R 100.0 2E-33 6.7E-38 225.1 26.1 212 53-279 59-312 (380)
17 3frx_A Guanine nucleotide-bind 100.0 5.2E-33 1.8E-37 217.5 27.1 195 52-279 9-210 (319)
18 3frx_A Guanine nucleotide-bind 100.0 9.9E-33 3.4E-37 216.0 28.5 204 35-279 41-251 (319)
19 2hes_X YDR267CP; beta-propelle 100.0 1.3E-32 4.5E-37 216.3 27.5 191 53-276 7-208 (330)
20 2xzm_R RACK1; ribosome, transl 100.0 2.3E-32 7.9E-37 216.0 28.0 198 52-279 13-227 (343)
21 4ery_A WD repeat-containing pr 100.0 3.9E-32 1.3E-36 212.0 28.3 188 54-279 17-206 (312)
22 1erj_A Transcriptional repress 100.0 3.4E-32 1.2E-36 218.9 28.6 210 35-276 146-363 (393)
23 2pm7_B Protein transport prote 100.0 4.1E-32 1.4E-36 210.4 28.0 212 35-279 32-268 (297)
24 3iz6_a 40S ribosomal protein R 100.0 2.6E-33 8.9E-38 224.4 21.8 226 35-279 89-358 (380)
25 4g56_B MGC81050 protein; prote 100.0 1.3E-32 4.6E-37 218.4 25.3 205 56-278 38-282 (357)
26 2pm7_B Protein transport prote 100.0 2.9E-32 9.9E-37 211.2 26.6 192 55-277 4-216 (297)
27 1erj_A Transcriptional repress 100.0 6.6E-32 2.3E-36 217.2 28.0 213 35-279 86-324 (393)
28 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.1E-32 2.4E-36 213.4 27.3 207 35-278 39-265 (345)
29 3dwl_C Actin-related protein 2 100.0 3.8E-33 1.3E-37 223.2 18.9 213 35-279 34-265 (377)
30 2hes_X YDR267CP; beta-propelle 100.0 1.1E-31 3.8E-36 211.0 26.8 213 33-278 33-263 (330)
31 4ery_A WD repeat-containing pr 100.0 3.1E-31 1.1E-35 206.9 29.1 208 35-278 46-292 (312)
32 2xzm_R RACK1; ribosome, transl 100.0 3.1E-31 1.1E-35 209.6 27.9 207 35-279 50-269 (343)
33 3bg1_A Protein SEC13 homolog; 100.0 1.7E-32 6E-37 214.3 19.6 192 55-277 8-224 (316)
34 4h5i_A Guanine nucleotide-exch 100.0 3.1E-31 1.1E-35 211.1 26.3 190 56-279 129-326 (365)
35 2ymu_A WD-40 repeat protein; u 100.0 4.8E-31 1.6E-35 222.3 28.2 183 55-279 380-563 (577)
36 4e54_B DNA damage-binding prot 100.0 2.1E-32 7.3E-37 223.0 18.9 192 55-279 114-310 (435)
37 3dm0_A Maltose-binding peripla 100.0 4.9E-31 1.7E-35 226.7 28.1 196 54-279 376-575 (694)
38 3f3f_A Nucleoporin SEH1; struc 100.0 5.3E-31 1.8E-35 208.0 25.8 201 55-279 6-320 (351)
39 3bg1_A Protein SEC13 homolog; 100.0 1.4E-31 4.8E-36 209.2 20.5 211 34-279 35-276 (316)
40 3mmy_A MRNA export factor; mRN 100.0 1.2E-30 4.1E-35 207.6 25.9 197 53-279 32-329 (368)
41 1nr0_A Actin interacting prote 100.0 1.5E-30 5.1E-35 220.5 27.1 198 55-278 142-380 (611)
42 4gga_A P55CDC, cell division c 100.0 4.9E-30 1.7E-34 208.2 28.6 219 35-279 126-378 (420)
43 1k8k_C P40, ARP2/3 complex 41 100.0 1.5E-30 5.3E-35 207.5 24.1 209 35-279 31-258 (372)
44 2j04_B YDR362CP, TAU91; beta p 100.0 7.5E-31 2.6E-35 217.0 22.0 220 30-279 179-411 (524)
45 3dm0_A Maltose-binding peripla 100.0 5.1E-30 1.7E-34 220.4 27.3 207 35-278 406-615 (694)
46 3jrp_A Fusion protein of prote 100.0 4.1E-30 1.4E-34 205.4 25.0 209 35-279 34-270 (379)
47 2aq5_A Coronin-1A; WD40 repeat 100.0 1.2E-29 4.2E-34 204.6 27.7 213 35-279 58-281 (402)
48 3zwl_B Eukaryotic translation 100.0 2.3E-29 7.8E-34 200.3 28.2 217 35-279 55-329 (369)
49 4aow_A Guanine nucleotide-bind 100.0 2.5E-29 8.6E-34 198.1 27.8 195 54-279 32-229 (340)
50 2xyi_A Probable histone-bindin 100.0 8.4E-30 2.9E-34 207.3 25.7 216 35-278 152-391 (430)
51 2pm9_A Protein WEB1, protein t 100.0 4E-30 1.4E-34 208.1 23.6 219 35-277 90-317 (416)
52 3vl1_A 26S proteasome regulato 100.0 4.8E-30 1.6E-34 208.1 23.8 205 35-278 120-347 (420)
53 2ymu_A WD-40 repeat protein; u 100.0 2.4E-29 8.4E-34 211.8 28.7 196 35-279 326-522 (577)
54 3zwl_B Eukaryotic translation 100.0 3.3E-29 1.1E-33 199.4 27.7 197 52-279 24-232 (369)
55 4gq1_A NUP37; propeller, trans 100.0 1.2E-30 4.2E-35 209.8 19.5 220 35-279 112-373 (393)
56 3i2n_A WD repeat-containing pr 100.0 2.2E-29 7.4E-34 199.7 25.9 211 35-279 91-335 (357)
57 1gxr_A ESG1, transducin-like e 100.0 1.1E-28 3.9E-33 194.0 29.8 206 35-279 73-279 (337)
58 4aez_A CDC20, WD repeat-contai 100.0 4.7E-29 1.6E-33 201.2 28.1 200 35-279 114-317 (401)
59 3dwl_C Actin-related protein 2 100.0 4.4E-31 1.5E-35 211.3 16.0 188 58-279 9-219 (377)
60 1gxr_A ESG1, transducin-like e 100.0 7.9E-29 2.7E-33 194.9 28.6 200 35-279 120-320 (337)
61 3ei3_B DNA damage-binding prot 100.0 2E-29 6.9E-34 202.1 25.5 189 55-279 68-265 (383)
62 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-30 5E-35 215.2 18.8 185 35-253 236-427 (524)
63 3jrp_A Fusion protein of prote 100.0 1.7E-29 5.9E-34 201.8 24.1 191 55-276 6-217 (379)
64 1sq9_A Antiviral protein SKI8; 100.0 2.4E-29 8.1E-34 202.5 24.0 209 35-277 92-366 (397)
65 4ggc_A P55CDC, cell division c 100.0 2.1E-28 7.2E-33 191.1 28.4 219 35-279 46-298 (318)
66 3dw8_B Serine/threonine-protei 100.0 9.3E-30 3.2E-34 207.9 21.3 203 57-279 25-299 (447)
67 2aq5_A Coronin-1A; WD40 repeat 100.0 4E-29 1.4E-33 201.7 24.7 211 35-279 105-327 (402)
68 3ei3_B DNA damage-binding prot 100.0 4.3E-29 1.5E-33 200.1 24.8 206 35-279 97-324 (383)
69 4aow_A Guanine nucleotide-bind 100.0 4.3E-28 1.5E-32 191.0 29.8 223 35-279 62-320 (340)
70 4e54_B DNA damage-binding prot 100.0 7E-30 2.4E-34 208.1 19.7 191 35-265 143-338 (435)
71 3vl1_A 26S proteasome regulato 100.0 1.2E-28 4.2E-33 199.7 26.9 202 35-278 79-303 (420)
72 1r5m_A SIR4-interacting protei 100.0 8.3E-29 2.8E-33 200.7 25.8 216 35-279 131-408 (425)
73 3k26_A Polycomb protein EED; W 100.0 1.2E-29 4E-34 201.8 20.2 215 35-279 96-349 (366)
74 4a11_B DNA excision repair pro 100.0 3.1E-28 1.1E-32 196.4 28.8 217 35-279 67-348 (408)
75 1r5m_A SIR4-interacting protei 100.0 3E-28 1E-32 197.3 27.9 186 59-279 107-344 (425)
76 1sq9_A Antiviral protein SKI8; 100.0 2E-29 6.9E-34 202.9 20.6 215 35-279 37-305 (397)
77 1k8k_C P40, ARP2/3 complex 41 100.0 1E-28 3.6E-33 196.9 24.2 190 57-278 5-215 (372)
78 2oaj_A Protein SNI1; WD40 repe 100.0 6.5E-29 2.2E-33 218.1 24.9 189 56-279 13-225 (902)
79 3odt_A Protein DOA1; ubiquitin 100.0 4.1E-28 1.4E-32 188.9 26.2 215 35-278 40-279 (313)
80 3mkq_A Coatomer beta'-subunit; 100.0 1.5E-28 5E-33 214.9 26.2 218 35-278 36-283 (814)
81 3i2n_A WD repeat-containing pr 100.0 9.1E-29 3.1E-33 196.1 22.5 214 33-278 43-272 (357)
82 3v7d_B Cell division control p 100.0 5.9E-28 2E-32 198.3 27.1 196 35-275 143-362 (464)
83 4aez_A CDC20, WD repeat-contai 100.0 6.9E-28 2.4E-32 194.4 26.1 199 35-279 157-363 (401)
84 4a11_B DNA excision repair pro 100.0 2.6E-28 8.7E-33 196.8 23.3 200 55-279 38-259 (408)
85 3sfz_A APAF-1, apoptotic pepti 100.0 6.6E-28 2.3E-32 219.4 28.5 209 35-278 638-895 (1249)
86 3jro_A Fusion protein of prote 100.0 5.3E-29 1.8E-33 215.6 20.2 209 35-279 32-268 (753)
87 3k26_A Polycomb protein EED; W 100.0 1.2E-28 4.1E-33 196.0 20.7 211 35-279 45-301 (366)
88 3gre_A Serine/threonine-protei 100.0 1.2E-28 4.2E-33 200.8 20.9 195 55-275 57-267 (437)
89 3vu4_A KMHSV2; beta-propeller 100.0 3E-28 1E-32 193.3 22.3 191 55-279 14-254 (355)
90 3jro_A Fusion protein of prote 100.0 2.9E-28 9.9E-33 210.9 23.0 191 55-276 4-215 (753)
91 2vdu_B TRNA (guanine-N(7)-)-me 100.0 9.7E-28 3.3E-32 196.3 24.9 186 57-279 99-321 (450)
92 4h5i_A Guanine nucleotide-exch 100.0 3.7E-28 1.3E-32 193.4 20.6 178 35-255 158-344 (365)
93 3gre_A Serine/threonine-protei 100.0 8.6E-29 3E-33 201.8 17.2 195 58-277 109-315 (437)
94 3mkq_A Coatomer beta'-subunit; 100.0 4E-28 1.4E-32 212.2 22.5 189 54-278 7-199 (814)
95 2xyi_A Probable histone-bindin 100.0 8.2E-28 2.8E-32 195.6 22.3 200 55-278 123-334 (430)
96 3lrv_A PRE-mRNA-splicing facto 100.0 2.7E-28 9.3E-33 192.7 18.6 207 35-279 59-274 (343)
97 2j04_A TAU60, YPL007P, hypothe 100.0 1.2E-27 4E-32 194.8 22.5 185 58-278 83-280 (588)
98 2pm9_A Protein WEB1, protein t 100.0 6.4E-28 2.2E-32 195.2 21.1 215 35-279 46-277 (416)
99 3odt_A Protein DOA1; ubiquitin 100.0 9.3E-27 3.2E-31 181.2 26.2 199 52-278 10-238 (313)
100 3dw8_B Serine/threonine-protei 100.0 4.4E-28 1.5E-32 198.0 19.1 231 35-279 51-356 (447)
101 3lrv_A PRE-mRNA-splicing facto 100.0 1.7E-27 5.8E-32 188.2 21.6 167 56-256 121-294 (343)
102 2j04_A TAU60, YPL007P, hypothe 100.0 9.9E-28 3.4E-32 195.2 20.1 201 59-274 14-235 (588)
103 3sfz_A APAF-1, apoptotic pepti 100.0 4.2E-27 1.4E-31 214.2 26.5 169 55-261 610-781 (1249)
104 3v7d_B Cell division control p 100.0 2E-26 6.7E-31 189.2 27.1 213 35-279 184-405 (464)
105 3f3f_A Nucleoporin SEH1; struc 100.0 8E-27 2.7E-31 184.0 23.8 210 35-262 34-345 (351)
106 1pgu_A Actin interacting prote 100.0 6.7E-27 2.3E-31 198.2 24.4 205 35-278 40-265 (615)
107 1yfq_A Cell cycle arrest prote 100.0 1E-26 3.5E-31 183.3 22.1 202 35-279 80-306 (342)
108 2w18_A PALB2, fancn, partner a 100.0 9.4E-27 3.2E-31 178.5 20.5 200 60-279 111-340 (356)
109 1p22_A F-BOX/WD-repeat protein 100.0 5.3E-26 1.8E-30 185.2 25.6 188 35-274 154-345 (435)
110 2vdu_B TRNA (guanine-N(7)-)-me 100.0 4.7E-26 1.6E-30 186.3 24.9 210 35-277 126-366 (450)
111 2ovr_B FBW7, F-BOX/WD repeat p 100.0 5.7E-26 2E-30 185.6 24.9 212 35-278 180-420 (445)
112 2oaj_A Protein SNI1; WD40 repe 100.0 2.7E-26 9.3E-31 201.6 24.5 201 35-275 40-281 (902)
113 1yfq_A Cell cycle arrest prote 100.0 2.2E-26 7.5E-31 181.5 20.6 189 54-278 5-207 (342)
114 4gga_A P55CDC, cell division c 99.9 1.3E-25 4.6E-30 182.1 24.8 189 55-277 225-418 (420)
115 2w18_A PALB2, fancn, partner a 99.9 4.4E-26 1.5E-30 174.8 19.5 164 55-252 173-355 (356)
116 1p22_A F-BOX/WD-repeat protein 99.9 1.4E-25 4.8E-30 182.7 23.4 190 35-273 194-393 (435)
117 2ovr_B FBW7, F-BOX/WD repeat p 99.9 6.5E-25 2.2E-29 179.3 27.1 189 35-275 140-329 (445)
118 1pgu_A Actin interacting prote 99.9 9.7E-26 3.3E-30 191.1 22.4 187 55-278 13-220 (615)
119 4gq1_A NUP37; propeller, trans 99.9 2.4E-26 8.3E-31 184.8 14.4 204 58-278 87-310 (393)
120 1l0q_A Surface layer protein; 99.9 4.9E-24 1.7E-28 171.2 27.5 196 35-279 13-213 (391)
121 1l0q_A Surface layer protein; 99.9 1E-23 3.4E-28 169.4 28.2 196 35-279 55-257 (391)
122 3bws_A Protein LP49; two-domai 99.9 4.7E-24 1.6E-28 173.6 24.5 202 35-278 145-357 (433)
123 3vu4_A KMHSV2; beta-propeller 99.9 3.8E-24 1.3E-28 169.7 21.8 179 36-255 42-272 (355)
124 4ggc_A P55CDC, cell division c 99.9 1.1E-23 3.9E-28 164.2 24.2 170 55-256 145-317 (318)
125 3bws_A Protein LP49; two-domai 99.9 5.9E-23 2E-27 167.0 28.0 197 35-279 192-414 (433)
126 3mmy_A MRNA export factor; mRN 99.9 3.8E-24 1.3E-28 170.0 19.9 181 35-252 65-344 (368)
127 2hqs_A Protein TOLB; TOLB, PAL 99.9 5.7E-23 2E-27 166.2 25.4 196 34-279 159-367 (415)
128 2oit_A Nucleoporin 214KDA; NH2 99.9 2.8E-23 9.5E-28 168.6 16.6 194 60-278 36-253 (434)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 2.7E-21 9.2E-26 156.4 24.6 194 35-278 204-410 (415)
130 2ojh_A Uncharacterized protein 99.9 1.1E-21 3.7E-26 151.1 20.8 202 32-279 20-230 (297)
131 1nir_A Nitrite reductase; hemo 99.9 5.3E-21 1.8E-25 159.3 25.1 207 35-279 160-434 (543)
132 3u4y_A Uncharacterized protein 99.9 2E-20 6.9E-25 146.7 25.2 203 35-279 21-234 (331)
133 2oit_A Nucleoporin 214KDA; NH2 99.9 2.1E-21 7.1E-26 157.7 17.6 176 58-255 90-279 (434)
134 2ojh_A Uncharacterized protein 99.9 1.8E-20 6.1E-25 144.3 20.2 199 35-279 63-285 (297)
135 3hfq_A Uncharacterized protein 99.9 3.5E-19 1.2E-23 140.7 24.7 224 35-279 64-299 (347)
136 1xfd_A DIP, dipeptidyl aminope 99.8 1E-19 3.5E-24 157.2 20.4 213 35-279 38-319 (723)
137 3vgz_A Uncharacterized protein 99.8 1.5E-18 5E-23 137.2 25.2 208 35-279 112-327 (353)
138 1ri6_A Putative isomerase YBHE 99.8 7.8E-19 2.7E-23 138.1 23.0 190 62-279 85-290 (343)
139 1ri6_A Putative isomerase YBHE 99.8 1.3E-18 4.5E-23 136.8 23.7 207 35-279 16-244 (343)
140 3vgz_A Uncharacterized protein 99.8 1.3E-18 4.5E-23 137.5 23.7 210 35-278 70-284 (353)
141 1pby_B Quinohemoprotein amine 99.8 2.3E-18 7.8E-23 135.1 23.9 209 35-279 12-293 (337)
142 2ecf_A Dipeptidyl peptidase IV 99.8 1.6E-19 5.5E-24 156.4 18.3 197 60-279 36-299 (741)
143 2ecf_A Dipeptidyl peptidase IV 99.8 4.3E-19 1.5E-23 153.8 19.4 182 62-278 110-349 (741)
144 1nir_A Nitrite reductase; hemo 99.8 1.7E-18 5.8E-23 144.3 21.8 180 67-279 144-337 (543)
145 3u4y_A Uncharacterized protein 99.8 1.8E-18 6.1E-23 135.6 20.7 206 35-279 63-286 (331)
146 1xfd_A DIP, dipeptidyl aminope 99.8 8.3E-20 2.9E-24 157.8 13.2 187 62-278 18-267 (723)
147 2z3z_A Dipeptidyl aminopeptida 99.8 2.2E-18 7.6E-23 148.5 21.8 185 63-279 183-414 (706)
148 1k32_A Tricorn protease; prote 99.8 1E-18 3.5E-23 156.6 20.1 178 59-279 294-485 (1045)
149 2z3z_A Dipeptidyl aminopeptida 99.8 1.3E-18 4.6E-23 149.9 18.9 218 35-278 102-368 (706)
150 3hfq_A Uncharacterized protein 99.8 8.8E-18 3E-22 132.6 22.0 212 35-279 19-253 (347)
151 1z68_A Fibroblast activation p 99.8 1.2E-19 4.1E-24 156.7 10.4 209 35-278 37-324 (719)
152 3scy_A Hypothetical bacterial 99.8 2.4E-16 8.2E-21 125.1 27.0 198 60-274 154-360 (361)
153 2oiz_A Aromatic amine dehydrog 99.8 6.2E-17 2.1E-21 128.4 22.9 89 179-279 259-361 (361)
154 1pby_B Quinohemoprotein amine 99.8 6.5E-17 2.2E-21 126.8 22.2 192 35-265 57-321 (337)
155 3scy_A Hypothetical bacterial 99.8 1.7E-16 5.7E-21 126.0 24.3 212 59-279 48-319 (361)
156 1z68_A Fibroblast activation p 99.8 4.8E-19 1.6E-23 153.0 9.5 181 65-278 20-265 (719)
157 1jof_A Carboxy-CIS,CIS-muconat 99.8 4.1E-16 1.4E-20 124.0 25.6 191 59-279 38-268 (365)
158 1k32_A Tricorn protease; prote 99.8 9E-17 3.1E-21 144.1 22.0 171 35-253 318-501 (1045)
159 3o4h_A Acylamino-acid-releasin 99.8 1.4E-17 4.9E-22 140.4 15.1 175 60-279 21-208 (582)
160 4a5s_A Dipeptidyl peptidase 4 99.8 2.2E-17 7.4E-22 143.0 16.0 186 62-278 18-272 (740)
161 1jmx_B Amine dehydrogenase; ox 99.8 2.5E-16 8.5E-21 124.1 20.5 189 35-264 66-335 (349)
162 1jof_A Carboxy-CIS,CIS-muconat 99.7 9.8E-17 3.3E-21 127.6 16.9 193 63-279 85-323 (365)
163 1jmx_B Amine dehydrogenase; ox 99.7 2.8E-16 9.7E-21 123.8 18.8 166 65-263 4-184 (349)
164 3o4h_A Acylamino-acid-releasin 99.7 5E-17 1.7E-21 137.1 14.3 192 36-278 46-258 (582)
165 4a5s_A Dipeptidyl peptidase 4 99.7 1.4E-16 4.7E-21 138.0 14.2 209 35-278 37-331 (740)
166 3pe7_A Oligogalacturonate lyas 99.7 1.9E-15 6.4E-20 121.0 19.7 186 55-279 25-251 (388)
167 3pe7_A Oligogalacturonate lyas 99.7 1.2E-15 4.2E-20 122.1 17.3 201 35-279 61-303 (388)
168 1q7f_A NHL, brain tumor CG1071 99.7 2.2E-13 7.4E-18 104.5 26.7 206 35-278 52-263 (286)
169 2dg1_A DRP35, lactonase; beta 99.7 1.9E-13 6.4E-18 107.2 25.7 207 35-278 67-292 (333)
170 3azo_A Aminopeptidase; POP fam 99.7 1.8E-14 6E-19 123.4 21.3 173 59-271 128-341 (662)
171 3fvz_A Peptidyl-glycine alpha- 99.7 2.4E-13 8.2E-18 106.5 25.6 215 35-278 70-304 (329)
172 3e5z_A Putative gluconolactona 99.6 3.9E-13 1.3E-17 103.6 23.2 200 35-278 51-269 (296)
173 3e5z_A Putative gluconolactona 99.6 3.2E-13 1.1E-17 104.1 22.4 186 55-278 22-230 (296)
174 3azo_A Aminopeptidase; POP fam 99.6 3.8E-14 1.3E-18 121.3 17.9 193 55-278 62-306 (662)
175 3no2_A Uncharacterized protein 99.6 1.1E-12 3.6E-17 100.0 23.3 200 35-278 16-225 (276)
176 1q7f_A NHL, brain tumor CG1071 99.6 4.5E-13 1.5E-17 102.7 21.5 191 56-278 25-219 (286)
177 3fvz_A Peptidyl-glycine alpha- 99.6 9.3E-13 3.2E-17 103.1 23.5 190 61-275 24-250 (329)
178 1xip_A Nucleoporin NUP159; bet 99.6 5E-14 1.7E-18 111.3 15.9 178 62-279 39-227 (388)
179 1qks_A Cytochrome CD1 nitrite 99.6 2.1E-12 7E-17 107.8 25.4 208 35-279 178-453 (567)
180 2xdw_A Prolyl endopeptidase; a 99.6 6.8E-13 2.3E-17 114.5 22.0 184 58-278 122-348 (710)
181 3c5m_A Oligogalacturonate lyas 99.6 1.1E-13 3.8E-18 110.9 14.8 212 35-278 61-295 (396)
182 3c5m_A Oligogalacturonate lyas 99.6 4.1E-14 1.4E-18 113.4 12.2 185 61-279 36-251 (396)
183 3g4e_A Regucalcin; six bladed 99.5 1.2E-11 4E-16 95.4 24.8 186 60-278 53-254 (297)
184 2xdw_A Prolyl endopeptidase; a 99.5 2.5E-12 8.6E-17 111.0 22.6 203 35-278 152-392 (710)
185 1rwi_B Serine/threonine-protei 99.5 5E-12 1.7E-16 95.9 21.6 181 59-278 65-246 (270)
186 3dsm_A Uncharacterized protein 99.5 3.9E-12 1.3E-16 99.5 20.9 200 35-277 65-278 (328)
187 2dg1_A DRP35, lactonase; beta 99.5 1.1E-11 3.7E-16 97.1 23.4 187 55-278 39-245 (333)
188 2bkl_A Prolyl endopeptidase; m 99.5 1.5E-12 5.2E-17 112.0 20.0 179 58-274 118-328 (695)
189 2gop_A Trilobed protease; beta 99.5 2.4E-12 8.2E-17 101.4 19.1 184 33-277 42-274 (347)
190 3dsm_A Uncharacterized protein 99.5 1.2E-11 4.1E-16 96.8 22.1 207 35-278 18-237 (328)
191 2oiz_A Aromatic amine dehydrog 99.5 4.5E-12 1.5E-16 100.4 18.1 107 71-203 14-140 (361)
192 1pjx_A Dfpase, DIISOPROPYLFLUO 99.5 7.4E-11 2.5E-15 91.4 24.2 210 35-278 47-280 (314)
193 1qks_A Cytochrome CD1 nitrite 99.5 5.5E-11 1.9E-15 99.3 24.8 178 69-279 164-355 (567)
194 3no2_A Uncharacterized protein 99.4 3.4E-11 1.2E-15 91.7 19.5 172 71-278 4-177 (276)
195 2mad_H Methylamine dehydrogena 99.4 2.2E-10 7.6E-15 91.0 23.9 205 35-278 48-330 (373)
196 1rwi_B Serine/threonine-protei 99.4 5.6E-11 1.9E-15 90.1 19.2 178 62-278 25-204 (270)
197 2ghs_A AGR_C_1268P; regucalcin 99.4 9.1E-10 3.1E-14 86.0 26.5 182 60-278 89-284 (326)
198 3sjl_D Methylamine dehydrogena 99.4 6.3E-11 2.2E-15 93.3 19.3 217 35-278 60-343 (386)
199 2gop_A Trilobed protease; beta 99.4 5.2E-11 1.8E-15 93.7 19.0 182 35-275 86-311 (347)
200 2z2n_A Virginiamycin B lyase; 99.4 2.4E-09 8.2E-14 82.1 26.5 180 59-278 55-237 (299)
201 2z2n_A Virginiamycin B lyase; 99.4 1E-09 3.5E-14 84.2 24.4 184 56-278 10-195 (299)
202 1yr2_A Prolyl oligopeptidase; 99.4 1.1E-10 3.8E-15 101.2 20.6 179 58-274 160-372 (741)
203 2bkl_A Prolyl endopeptidase; m 99.3 1.4E-10 4.9E-15 99.8 20.3 203 34-278 147-375 (695)
204 3c75_H MADH, methylamine dehyd 99.3 2.6E-10 9E-15 91.3 19.7 215 35-278 100-382 (426)
205 3hrp_A Uncharacterized protein 99.3 5.5E-10 1.9E-14 89.9 21.7 185 61-278 131-335 (409)
206 3dr2_A Exported gluconolactona 99.3 5.4E-10 1.9E-14 86.4 20.5 182 59-278 84-289 (305)
207 1xip_A Nucleoporin NUP159; bet 99.3 1.3E-10 4.4E-15 91.9 16.8 139 59-240 87-230 (388)
208 3iuj_A Prolyl endopeptidase; h 99.3 1.1E-10 3.9E-15 100.3 17.9 184 57-278 125-338 (693)
209 1yr2_A Prolyl oligopeptidase; 99.3 1.2E-09 4E-14 94.8 21.2 201 34-278 189-419 (741)
210 3g4e_A Regucalcin; six bladed 99.3 9.4E-09 3.2E-13 79.1 23.8 180 61-278 13-211 (297)
211 2qc5_A Streptogramin B lactona 99.2 2.6E-08 9.1E-13 76.3 26.2 180 59-278 60-242 (300)
212 3hrp_A Uncharacterized protein 99.2 7.6E-09 2.6E-13 83.2 23.2 187 66-278 176-392 (409)
213 1mda_H Methylamine dehydrogena 99.2 7E-10 2.4E-14 87.4 15.6 212 35-279 47-327 (368)
214 2qe8_A Uncharacterized protein 99.2 2.2E-09 7.7E-14 84.4 18.5 200 58-278 64-303 (343)
215 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 8.3E-09 2.8E-13 79.8 21.2 184 61-278 18-238 (314)
216 2qc5_A Streptogramin B lactona 99.2 4.1E-08 1.4E-12 75.2 24.5 180 59-278 18-200 (300)
217 1fwx_A Nitrous oxide reductase 99.2 1.6E-09 5.6E-14 89.1 17.2 123 149-279 255-401 (595)
218 2hz6_A Endoplasmic reticulum t 99.2 3.4E-11 1.2E-15 95.6 6.4 191 35-277 20-215 (369)
219 2ghs_A AGR_C_1268P; regucalcin 99.1 1.4E-08 5E-13 79.1 20.4 176 62-278 50-242 (326)
220 2ece_A 462AA long hypothetical 99.1 8.2E-09 2.8E-13 82.2 18.9 189 63-279 140-394 (462)
221 3sjl_D Methylamine dehydrogena 99.1 7.9E-09 2.7E-13 81.5 18.7 227 35-276 110-384 (386)
222 3dr2_A Exported gluconolactona 99.1 2.5E-08 8.7E-13 77.0 21.4 181 59-278 43-251 (305)
223 2iwa_A Glutamine cyclotransfer 99.1 1.8E-07 6.3E-12 69.9 24.4 179 62-278 22-218 (266)
224 2mad_H Methylamine dehydrogena 99.1 1.4E-07 4.8E-12 74.9 25.0 187 63-261 127-357 (373)
225 3nol_A Glutamine cyclotransfer 99.1 1.7E-07 5.9E-12 69.3 23.1 179 61-278 43-237 (262)
226 1kb0_A Quinohemoprotein alcoho 99.1 8E-09 2.7E-13 88.4 16.8 190 64-278 246-532 (677)
227 3c75_H MADH, methylamine dehyd 99.0 1E-07 3.5E-12 76.4 19.2 229 35-276 150-423 (426)
228 2ece_A 462AA long hypothetical 99.0 2.1E-07 7.3E-12 74.2 20.5 184 70-279 93-334 (462)
229 3iuj_A Prolyl endopeptidase; h 99.0 4.7E-08 1.6E-12 84.1 18.3 200 33-278 154-383 (693)
230 1yiq_A Quinohemoprotein alcoho 99.0 3.9E-08 1.3E-12 84.4 16.8 189 65-278 239-530 (689)
231 3nok_A Glutaminyl cyclase; bet 98.9 1E-06 3.4E-11 65.3 21.7 178 61-278 55-247 (268)
232 2iwa_A Glutamine cyclotransfer 98.9 8.2E-07 2.8E-11 66.4 20.5 186 35-255 45-238 (266)
233 3qqz_A Putative uncharacterize 98.9 6E-06 2.1E-10 61.4 25.2 199 55-278 21-236 (255)
234 3nok_A Glutaminyl cyclase; bet 98.9 3.2E-07 1.1E-11 67.9 17.7 170 36-242 77-254 (268)
235 3mbr_X Glutamine cyclotransfer 98.9 3.8E-06 1.3E-10 61.7 23.2 179 61-278 21-216 (243)
236 1mda_H Methylamine dehydrogena 98.9 3E-07 1E-11 72.5 17.5 226 33-276 95-367 (368)
237 2hz6_A Endoplasmic reticulum t 98.9 8.5E-10 2.9E-14 87.6 3.0 148 71-262 8-157 (369)
238 3nol_A Glutamine cyclotransfer 98.8 1.4E-06 4.8E-11 64.5 19.4 172 35-242 66-244 (262)
239 2qe8_A Uncharacterized protein 98.8 7.5E-08 2.6E-12 75.7 13.4 147 129-278 19-207 (343)
240 1npe_A Nidogen, entactin; glyc 98.8 2.4E-05 8.1E-10 59.0 25.1 178 61-278 79-263 (267)
241 3mbr_X Glutamine cyclotransfer 98.7 6E-06 2E-10 60.6 18.7 172 35-242 44-223 (243)
242 3hxj_A Pyrrolo-quinoline quino 98.7 3.2E-06 1.1E-10 65.6 17.8 124 134-278 184-307 (330)
243 2fp8_A Strictosidine synthase; 98.6 1.2E-05 4.2E-10 62.4 19.6 196 62-278 20-241 (322)
244 2xe4_A Oligopeptidase B; hydro 98.6 5.8E-06 2E-10 71.8 17.8 162 58-254 170-354 (751)
245 1fwx_A Nitrous oxide reductase 98.5 8.4E-06 2.9E-10 67.4 17.2 171 70-277 99-342 (595)
246 1kv9_A Type II quinohemoprotei 98.5 6.8E-06 2.3E-10 70.3 15.6 176 64-264 233-498 (668)
247 3hxj_A Pyrrolo-quinoline quino 98.4 3.8E-06 1.3E-10 65.2 12.7 119 139-277 108-226 (330)
248 1kb0_A Quinohemoprotein alcoho 98.4 4.8E-05 1.6E-09 65.3 19.0 153 36-204 285-508 (677)
249 2p4o_A Hypothetical protein; p 98.4 0.00024 8.2E-09 54.6 20.9 185 61-278 72-270 (306)
250 2fp8_A Strictosidine synthase; 98.4 0.0003 1E-08 54.5 21.5 175 62-273 81-291 (322)
251 4hw6_A Hypothetical protein, I 98.4 0.00062 2.1E-08 55.1 24.2 145 128-278 229-415 (433)
252 1npe_A Nidogen, entactin; glyc 98.3 0.00039 1.3E-08 52.2 23.3 175 61-273 36-216 (267)
253 1flg_A Protein (quinoprotein e 98.3 2.2E-05 7.5E-10 66.0 14.9 130 139-278 337-541 (582)
254 3v65_B Low-density lipoprotein 98.3 0.00074 2.5E-08 53.8 23.4 176 61-273 116-296 (386)
255 3tc9_A Hypothetical hydrolase; 98.3 3.7E-05 1.3E-09 62.2 15.5 137 128-278 138-282 (430)
256 1yiq_A Quinohemoprotein alcoho 98.3 7.3E-05 2.5E-09 64.3 17.0 83 147-242 454-537 (689)
257 3tc9_A Hypothetical hydrolase; 98.3 0.0011 3.8E-08 53.6 23.7 143 128-276 227-409 (430)
258 3v64_C Agrin; beta propeller, 98.2 0.001 3.5E-08 52.2 24.7 176 61-273 73-253 (349)
259 2p4o_A Hypothetical protein; p 98.2 0.00091 3.1E-08 51.4 23.1 185 61-278 32-224 (306)
260 3v64_C Agrin; beta propeller, 98.2 0.0009 3.1E-08 52.5 21.3 178 61-278 34-215 (349)
261 4a2l_A BT_4663, two-component 98.2 0.0026 8.9E-08 55.7 25.6 192 60-278 356-555 (795)
262 1w6s_A Methanol dehydrogenase 98.1 0.00032 1.1E-08 59.1 18.2 116 139-264 324-513 (599)
263 2ad6_A Methanol dehydrogenase 98.1 8.3E-05 2.8E-09 62.4 14.7 115 140-264 318-504 (571)
264 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.00033 1.1E-08 55.4 17.5 106 71-204 102-208 (376)
265 3v65_B Low-density lipoprotein 98.1 0.0023 7.8E-08 51.0 23.1 138 121-278 117-258 (386)
266 3amr_A 3-phytase; beta-propell 98.1 0.0022 7.5E-08 49.7 20.9 115 140-262 145-272 (355)
267 3q7m_A Lipoprotein YFGL, BAMB; 98.1 0.00052 1.8E-08 54.3 17.3 164 71-262 52-215 (376)
268 3m0c_C LDL receptor, low-densi 98.0 0.0064 2.2E-07 53.0 24.3 169 60-261 423-596 (791)
269 2p9w_A MAL S 1 allergenic prot 98.0 0.00096 3.3E-08 51.2 16.7 177 61-255 13-216 (334)
270 1n7d_A LDL receptor, low-densi 98.0 0.00014 4.7E-09 62.6 13.6 176 63-275 455-635 (699)
271 4a2l_A BT_4663, two-component 98.0 0.0072 2.5E-07 53.0 26.5 189 60-278 405-598 (795)
272 3pbp_A Nucleoporin NUP82; beta 97.9 0.0013 4.3E-08 52.2 16.9 139 137-278 31-192 (452)
273 3p5b_L Low density lipoprotein 97.9 0.0052 1.8E-07 49.2 24.1 181 60-273 111-298 (400)
274 2xe4_A Oligopeptidase B; hydro 97.9 9.5E-05 3.2E-09 64.3 11.1 110 133-255 180-305 (751)
275 3v9f_A Two-component system se 97.9 0.0067 2.3E-07 53.1 22.2 186 60-278 406-595 (781)
276 1k3i_A Galactose oxidase precu 97.8 0.0034 1.2E-07 53.7 19.4 57 35-94 220-277 (656)
277 2ad6_A Methanol dehydrogenase 97.8 0.0021 7.3E-08 54.0 17.7 53 146-204 442-495 (571)
278 1n7d_A LDL receptor, low-densi 97.8 0.00025 8.6E-09 61.0 12.3 162 61-255 406-572 (699)
279 3sov_A LRP-6, low-density lipo 97.8 0.0062 2.1E-07 47.0 23.3 178 62-275 36-218 (318)
280 2p9w_A MAL S 1 allergenic prot 97.8 0.0012 4.1E-08 50.7 14.4 146 128-278 14-197 (334)
281 4hw6_A Hypothetical protein, I 97.8 0.00094 3.2E-08 54.0 14.6 137 128-278 140-285 (433)
282 1w6s_A Methanol dehydrogenase 97.8 0.0089 3.1E-07 50.4 20.9 173 66-262 111-350 (599)
283 1kv9_A Type II quinohemoprotei 97.8 0.0045 1.5E-07 53.1 19.3 168 72-262 117-341 (668)
284 1ijq_A LDL receptor, low-densi 97.7 0.0082 2.8E-07 46.3 26.0 181 61-274 30-217 (316)
285 3kya_A Putative phosphatase; s 97.7 0.0013 4.5E-08 53.7 14.6 142 129-278 141-322 (496)
286 3p5b_L Low density lipoprotein 97.7 0.014 4.7E-07 46.7 26.7 177 61-274 159-340 (400)
287 3kya_A Putative phosphatase; s 97.7 0.013 4.3E-07 48.1 19.2 163 62-252 140-339 (496)
288 1ijq_A LDL receptor, low-densi 97.7 0.011 3.9E-07 45.5 24.4 166 61-263 77-247 (316)
289 3v9f_A Two-component system se 97.6 0.028 9.5E-07 49.2 24.7 192 59-278 311-507 (781)
290 3sre_A PON1, serum paraoxonase 97.6 0.0093 3.2E-07 46.7 17.3 120 147-278 138-279 (355)
291 3qqz_A Putative uncharacterize 97.6 0.011 3.7E-07 44.0 18.7 119 120-252 27-149 (255)
292 1flg_A Protein (quinoprotein e 97.6 0.0076 2.6E-07 50.7 17.6 52 147-204 465-517 (582)
293 3sre_A PON1, serum paraoxonase 97.6 0.0099 3.4E-07 46.5 16.7 140 133-279 56-234 (355)
294 1k3i_A Galactose oxidase precu 97.5 0.025 8.6E-07 48.4 20.2 114 65-203 190-323 (656)
295 1cru_A Protein (soluble quinop 97.5 0.012 4.2E-07 47.8 17.1 111 131-242 31-162 (454)
296 2ism_A Putative oxidoreductase 97.4 0.0042 1.4E-07 48.7 13.3 107 129-242 33-153 (352)
297 3a9g_A Putative uncharacterize 97.4 0.0073 2.5E-07 47.4 14.2 105 130-242 32-153 (354)
298 2xbg_A YCF48-like protein; pho 97.4 0.029 9.9E-07 43.4 19.9 161 58-252 160-320 (327)
299 3m0c_C LDL receptor, low-densi 97.4 0.063 2.1E-06 46.9 25.8 175 61-272 471-650 (791)
300 3amr_A 3-phytase; beta-propell 97.3 0.034 1.2E-06 43.2 21.2 178 71-278 39-243 (355)
301 3sov_A LRP-6, low-density lipo 97.3 0.033 1.1E-06 43.0 21.5 173 62-273 80-257 (318)
302 3das_A Putative oxidoreductase 97.2 0.025 8.6E-07 44.1 15.3 144 129-278 34-214 (347)
303 2xbg_A YCF48-like protein; pho 97.2 0.049 1.7E-06 42.1 21.8 131 135-277 171-304 (327)
304 2g8s_A Glucose/sorbosone dehyd 97.2 0.0091 3.1E-07 46.9 12.5 146 128-278 19-210 (353)
305 3s94_A LRP-6, low-density lipo 97.1 0.058 2E-06 45.8 17.9 173 61-272 84-261 (619)
306 4a0p_A LRP6, LRP-6, low-densit 97.1 0.1 3.5E-06 44.4 25.4 176 61-275 37-217 (628)
307 3pbp_A Nucleoporin NUP82; beta 97.0 0.011 3.8E-07 47.0 11.6 127 62-199 67-208 (452)
308 1tl2_A L10, protein (tachylect 96.8 0.077 2.6E-06 38.3 13.8 156 61-247 41-203 (236)
309 3s94_A LRP-6, low-density lipo 96.8 0.2 6.7E-06 42.6 23.6 161 60-256 39-204 (619)
310 2ism_A Putative oxidoreductase 96.7 0.05 1.7E-06 42.6 13.0 99 175-278 32-147 (352)
311 1tl2_A L10, protein (tachylect 96.5 0.12 4.2E-06 37.3 12.6 108 133-252 47-161 (236)
312 3a9g_A Putative uncharacterize 96.1 0.089 3E-06 41.2 11.5 99 175-278 30-147 (354)
313 4a0p_A LRP6, LRP-6, low-densit 96.1 0.58 2E-05 39.8 23.6 167 74-278 8-178 (628)
314 2g8s_A Glucose/sorbosone dehyd 95.5 0.67 2.3E-05 36.2 23.7 56 223-278 271-335 (353)
315 3s25_A Hypothetical 7-bladed b 95.2 0.36 1.2E-05 36.8 11.4 118 135-278 61-196 (302)
316 2be1_A Serine/threonine-protei 95.2 0.15 5.2E-06 39.5 9.1 116 139-263 11-139 (339)
317 3das_A Putative oxidoreductase 95.1 0.91 3.1E-05 35.4 21.3 32 61-92 32-63 (347)
318 3sbq_A Nitrous-oxide reductase 95.0 0.39 1.3E-05 39.8 11.3 89 175-265 324-429 (638)
319 2xzh_A Clathrin heavy chain 1; 95.0 0.91 3.1E-05 35.0 25.2 197 35-270 50-306 (365)
320 1cru_A Protein (soluble quinop 95.0 1.2 4E-05 36.2 15.0 102 175-278 28-156 (454)
321 3ei3_A DNA damage-binding prot 94.6 2.7 9.2E-05 38.7 20.8 175 35-253 808-998 (1158)
322 1bpo_A Protein (clathrin); cla 94.5 1.5 5.3E-05 35.3 24.4 175 66-270 71-305 (494)
323 1bpo_A Protein (clathrin); cla 94.1 1.9 6.5E-05 34.8 20.6 144 35-204 126-290 (494)
324 2xn4_A Kelch-like protein 2; s 94.0 1.5 5E-05 33.1 18.8 106 137-256 155-278 (302)
325 3ii7_A Kelch-like protein 7; p 93.4 2 6.7E-05 32.5 16.7 106 137-256 101-227 (306)
326 2vpj_A Kelch-like protein 12; 92.7 2.4 8.2E-05 31.9 17.7 106 137-256 112-233 (301)
327 3ott_A Two-component system se 92.7 4.6 0.00016 35.1 22.1 182 60-277 62-243 (758)
328 3ei3_A DNA damage-binding prot 92.4 6.6 0.00023 36.2 18.5 116 133-261 468-598 (1158)
329 1xi4_A Clathrin heavy chain; a 92.4 6 0.0002 37.2 14.9 36 224-260 260-295 (1630)
330 2wg3_C Hedgehog-interacting pr 92.0 2.9 9.8E-05 34.1 11.6 113 129-244 16-159 (463)
331 2wg3_C Hedgehog-interacting pr 92.0 4.3 0.00015 33.0 15.2 103 175-278 15-151 (463)
332 4asc_A Kelch repeat and BTB do 91.7 3.4 0.00012 31.4 16.9 107 137-257 148-280 (315)
333 4gq2_M Nucleoporin NUP120; bet 91.7 4.8 0.00017 36.2 13.7 69 135-203 244-317 (950)
334 1zgk_A Kelch-like ECH-associat 91.5 3.6 0.00012 31.1 15.2 106 137-256 121-242 (308)
335 1zgk_A Kelch-like ECH-associat 91.4 3.7 0.00013 31.1 17.5 107 137-257 168-290 (308)
336 2vpj_A Kelch-like protein 12; 90.8 4.1 0.00014 30.6 21.6 106 137-256 159-280 (301)
337 2xzh_A Clathrin heavy chain 1; 90.7 4.8 0.00016 31.2 19.3 117 135-264 75-198 (365)
338 2be1_A Serine/threonine-protei 90.4 0.97 3.3E-05 35.1 7.1 110 73-204 11-131 (339)
339 3q6k_A 43.2 kDa salivary prote 89.9 6.1 0.00021 31.2 18.9 197 35-242 124-342 (381)
340 3sbq_A Nitrous-oxide reductase 89.7 0.88 3E-05 37.8 6.5 74 128-203 324-408 (638)
341 3ii7_A Kelch-like protein 7; p 89.7 5.3 0.00018 30.1 22.6 113 137-263 149-283 (306)
342 4fhn_B Nucleoporin NUP120; pro 89.0 14 0.00048 34.0 15.4 38 224-262 239-276 (1139)
343 2xn4_A Kelch-like protein 2; s 88.8 6.1 0.00021 29.7 19.1 106 137-256 108-231 (302)
344 2woz_A Kelch repeat and BTB do 88.8 6.4 0.00022 29.9 15.1 108 137-258 158-291 (318)
345 2zwa_A Leucine carboxyl methyl 88.0 12 0.00042 32.2 14.9 113 137-256 451-579 (695)
346 4asc_A Kelch repeat and BTB do 87.9 7.3 0.00025 29.5 18.0 106 137-256 98-223 (315)
347 4gq2_M Nucleoporin NUP120; bet 87.3 16 0.00056 32.9 19.8 38 224-262 237-274 (950)
348 3zwu_A Alkaline phosphatase PH 87.3 2.2 7.7E-05 35.8 7.6 59 128-190 477-547 (592)
349 3zwu_A Alkaline phosphatase PH 87.0 2 6.7E-05 36.2 7.1 55 224-279 477-544 (592)
350 4a9v_A PHOX; hydrolase, beta-p 82.1 6.4 0.00022 32.9 7.9 56 223-279 476-544 (592)
351 4a9v_A PHOX; hydrolase, beta-p 81.3 6.2 0.00021 33.0 7.6 60 128-191 477-548 (592)
352 2zwa_A Leucine carboxyl methyl 81.1 26 0.00089 30.2 20.1 116 137-257 500-638 (695)
353 3f7f_A Nucleoporin NUP120; nuc 80.9 18 0.00063 31.2 10.4 65 137-203 230-305 (729)
354 1xi4_A Clathrin heavy chain; a 79.2 44 0.0015 31.9 12.7 109 135-255 74-189 (1630)
355 2uvk_A YJHT; unknown function, 79.1 20 0.00067 27.6 17.8 57 195-260 286-348 (357)
356 4fhn_B Nucleoporin NUP120; pro 77.9 3 0.0001 38.4 5.3 37 61-97 238-274 (1139)
357 2uvk_A YJHT; unknown function, 76.4 24 0.00082 27.1 19.6 16 148-163 168-183 (357)
358 3ott_A Two-component system se 75.2 41 0.0014 29.2 23.2 157 61-250 146-303 (758)
359 2woz_A Kelch repeat and BTB do 72.5 28 0.00097 26.2 18.7 106 137-256 109-233 (318)
360 3s25_A Hypothetical 7-bladed b 71.8 30 0.001 26.2 18.3 61 134-203 152-216 (302)
361 3uc1_A DNA gyrase subunit A; D 69.8 36 0.0012 26.2 18.5 170 60-252 41-226 (327)
362 1suu_A DNA gyrase subunit A; t 61.3 52 0.0018 25.0 20.3 172 61-253 47-230 (312)
363 4h3o_A Lectin; cadmium, plant 47.2 47 0.0016 20.3 10.6 25 178-203 54-78 (105)
364 3uc1_A DNA gyrase subunit A; D 44.4 1.1E+02 0.0036 23.6 20.7 168 60-252 94-277 (327)
365 1zi0_A DNA gyrase subunit A; b 42.2 1.1E+02 0.0038 23.1 18.9 125 116-252 91-224 (307)
366 3no0_A DNA gyrase subunit A; D 37.4 1.3E+02 0.0043 22.4 19.0 165 60-253 67-245 (276)
367 3q6k_A 43.2 kDa salivary prote 35.5 1.6E+02 0.0056 23.2 24.5 137 139-278 171-336 (381)
368 1ukf_A Avirulence protein AVRP 34.9 50 0.0017 22.9 3.8 36 222-257 118-153 (188)
369 1wp5_A Topoisomerase IV; broke 33.5 1.6E+02 0.0055 22.5 20.4 173 61-253 39-224 (323)
370 3f7f_A Nucleoporin NUP120; nuc 33.5 2.4E+02 0.0083 24.6 18.4 30 234-263 230-259 (729)
371 2zux_A YESW protein; beta-prop 32.3 2.3E+02 0.0078 23.9 19.3 44 220-263 361-409 (591)
372 3mez_A Mannose-specific lectin 31.4 94 0.0032 19.2 8.9 24 178-201 53-76 (111)
373 3b7f_A Glycosyl hydrolase, BNR 31.2 1.9E+02 0.0063 22.5 20.4 96 175-274 279-391 (394)
374 3qhy_B Beta-lactamase inhibito 29.2 1.8E+02 0.006 21.6 15.4 89 147-254 158-246 (282)
375 3l6v_A GYRA, DNA gyrase subuni 28.1 2.2E+02 0.0074 22.3 20.7 126 60-202 45-179 (370)
376 3enb_A PRE-mRNA-processing-spl 26.5 1.3E+02 0.0043 21.3 4.6 39 224-262 16-54 (222)
377 4hvt_A Ritya.17583.B, post-pro 24.2 3.5E+02 0.012 23.5 19.1 78 193-277 319-407 (711)
378 1b2p_A Protein (lectin); manno 24.0 1.4E+02 0.0047 18.7 12.5 24 178-202 64-87 (119)
379 3no0_A DNA gyrase subunit A; D 22.8 2.4E+02 0.0081 20.9 16.5 159 61-253 24-195 (276)
380 3mez_B Mannose-specific lectin 21.4 1.5E+02 0.0053 18.2 11.6 59 140-203 26-84 (113)
381 3e9l_A PRE-mRNA-processing-spl 21.0 1.8E+02 0.0061 21.0 4.6 39 224-262 25-63 (257)
382 3sbt_A PRE-mRNA-splicing facto 20.9 1.7E+02 0.0059 21.1 4.5 39 224-262 24-62 (260)
383 1olz_A Semaphorin 4D; developm 20.7 3.6E+02 0.012 23.2 7.4 27 222-249 449-477 (663)
384 3dzw_A Agglutinin; lectin, man 20.1 1.6E+02 0.0055 18.0 10.8 25 178-203 53-77 (109)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1.2e-36 Score=240.18 Aligned_cols=207 Identities=15% Similarity=0.164 Sum_probs=165.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.+++...... ....+|.+.|++++|+|++++|++|+.|++|++||+.++.... .
T Consensus 104 ~v~lWd~~~~~~~~~~~--~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~-----------------~ 164 (344)
T 4gqb_B 104 AVELWELDENETLIVSK--FCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLS-----------------S 164 (344)
T ss_dssp EEEEEEECTTSSCEEEE--EEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-----------------E
T ss_pred EEEEEeccCCCceeEee--ccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE-----------------E
Confidence 57899998887654322 2456899999999999999999999999999999998764321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCC-cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCC-CEEEEe-
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG-TKIFAG- 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~- 191 (279)
...|...|.++.| ++++ .+|++++.|++|++||+++++....+..... ...+.+++|+|++ +++++|
T Consensus 165 ~~~h~~~V~~~~~-------~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 165 YRAHAAQVTCVAA-------SPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAP---GYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp ECCCSSCEEEEEE-------CSSCTTEEEEEETTSCEEEEETTSSSCEEECC-------CCCEEEEEECSSCTTEEEEEE
T ss_pred EcCcCCceEEEEe-------cCCCCCceeeeccccccccccccccceeeeeeccee---eccceeeeecCCCCcceEEec
Confidence 3456788999988 4555 4789999999999999999988877654322 1167899999964 667766
Q ss_pred cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEE
Q 023672 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHV 271 (279)
Q Consensus 192 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 271 (279)
.|+.|++||++++ +.+..+ .+|...|++++|+|++..+|++|+.|++|+|||+++++++ .+.+|.+.|+++
T Consensus 235 ~dg~v~~wd~~~~----~~~~~~----~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~-~~~~H~~~V~~v 305 (344)
T 4gqb_B 235 ENGTVSLVDTKST----SCVLSS----AVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF-RSQAHRDFVRDA 305 (344)
T ss_dssp TTSEEEEEESCC------CCEEE----ECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE-EECCCSSCEEEE
T ss_pred cCCcEEEEECCCC----cEEEEE----cCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE-EEcCCCCCEEEE
Confidence 8999999999984 223333 6899999999999944478999999999999999998865 578899999999
Q ss_pred EEccCCCC
Q 023672 272 SKLSSAYT 279 (279)
Q Consensus 272 ~~spdg~~ 279 (279)
+|+|+|++
T Consensus 306 ~~sp~~~~ 313 (344)
T 4gqb_B 306 TWSPLNHS 313 (344)
T ss_dssp EECSSSTT
T ss_pred EEeCCCCe
Confidence 99999863
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=8.8e-36 Score=233.34 Aligned_cols=200 Identities=18% Similarity=0.259 Sum_probs=173.1
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.+++... .+.+|...+.+++|+|++++|++|+.||.|++|+++++.... .
T Consensus 103 ~i~lWd~~~~~~~~------~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~-----------------~ 159 (321)
T 3ow8_A 103 HIRLWDLENGKQIK------SIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEY-----------------S 159 (321)
T ss_dssp EEEEEETTTTEEEE------EEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEE-----------------E
T ss_pred cEEEEECCCCCEEE------EEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeE-----------------E
Confidence 56788888776654 566788889999999999999999999999999998754321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...+...+.+++| +|++++|++|+.|+.|++||+++++.+..+..+.. .|.+++|+|++++|+++ .|
T Consensus 160 ~~~~~~~v~~~~~-------spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~-----~v~~l~~spd~~~l~s~s~d 227 (321)
T 3ow8_A 160 LDTRGKFILSIAY-------SPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM-----PIRSLTFSPDSQLLVTASDD 227 (321)
T ss_dssp EECSSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-----CCCEEEECTTSCEEEEECTT
T ss_pred ecCCCceEEEEEE-------CCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC-----ceeEEEEcCCCCEEEEEcCC
Confidence 2345567888877 77899999999999999999999999999887776 89999999999999976 99
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
+.|++||++.. .....+ .+|...|.+++|+| ++.+|++|+.|++|++||+++++++..+.+|...|.+++|
T Consensus 228 g~i~iwd~~~~----~~~~~~----~~h~~~v~~~~~sp-~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~ 298 (321)
T 3ow8_A 228 GYIKIYDVQHA----NLAGTL----SGHASWVLNVAFCP-DDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKY 298 (321)
T ss_dssp SCEEEEETTTC----CEEEEE----CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE
T ss_pred CeEEEEECCCc----ceeEEE----cCCCCceEEEEECC-CCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEE
Confidence 99999999874 222333 68999999999999 8999999999999999999999999999999999999999
Q ss_pred ccCCC
Q 023672 274 LSSAY 278 (279)
Q Consensus 274 spdg~ 278 (279)
+|+|+
T Consensus 299 s~~g~ 303 (321)
T 3ow8_A 299 NGNGS 303 (321)
T ss_dssp CTTSS
T ss_pred CCCCC
Confidence 99986
No 3
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3.7e-35 Score=237.38 Aligned_cols=202 Identities=20% Similarity=0.225 Sum_probs=173.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.++.... .+.+|.+.|.+++|+|++++|++|+.|++|+|||+.++.... .
T Consensus 131 ~i~vwd~~~~~~~~------~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~-----------------~ 187 (410)
T 1vyh_C 131 TIKVWDYETGDFER------TLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIR-----------------T 187 (410)
T ss_dssp CEEEEETTTCCCCE------EECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEE-----------------C
T ss_pred eEEEEECCCCcEEE------EEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeE-----------------E
Confidence 46688888777654 678999999999999999999999999999999998654321 1
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...|...|.+++| +|++.+|++|+.|++|++||++++.++..+..|.. .|.++.|+|++.+++++ .|
T Consensus 188 ~~~h~~~V~~v~~-------~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~-----~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 188 MHGHDHNVSSVSI-------MPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHRE-----WVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp CCCCSSCEEEEEE-------CSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECTTSSEEEEEETT
T ss_pred EcCCCCCEEEEEE-------eCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCc-----cEEEEEECCCCCEEEEEcCC
Confidence 2346678999887 67889999999999999999999999999888776 89999999999999966 99
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCC-------------------CcEEEEEeCCCcEEEEecCC
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH-------------------TGMLAIGSYSQTSAIYREDN 254 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-------------------~~~l~~~~~dg~i~~wd~~~ 254 (279)
+.|++||++++ .....+ .+|...|.+++|+|+. +.+|++|+.|+.|++||+++
T Consensus 256 ~~v~vwd~~~~----~~~~~~----~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~ 327 (410)
T 1vyh_C 256 QTVRVWVVATK----ECKAEL----REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVST 327 (410)
T ss_dssp SCEEEEETTTC----CEEEEE----CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTT
T ss_pred CeEEEEECCCC----ceeeEe----cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999874 222333 6888999999999931 56899999999999999999
Q ss_pred CeEEEEEeecCCCEEEEEEccCCCC
Q 023672 255 MELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 255 ~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+.++..+.+|...|++++|+|+|++
T Consensus 328 ~~~~~~~~~h~~~v~~v~~~~~g~~ 352 (410)
T 1vyh_C 328 GMCLMTLVGHDNWVRGVLFHSGGKF 352 (410)
T ss_dssp TEEEEEEECCSSCEEEEEECSSSSC
T ss_pred CceEEEEECCCCcEEEEEEcCCCCE
Confidence 9999999999999999999999975
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-34 Score=234.34 Aligned_cols=201 Identities=16% Similarity=0.236 Sum_probs=171.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.+...+. .+.+|.+.|.+++|+|++++|++|+.|++|++||+.++.... .
T Consensus 173 ~i~iwd~~~~~~~~------~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~-----------------~ 229 (410)
T 1vyh_C 173 TIKLWDFQGFECIR------TMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVK-----------------T 229 (410)
T ss_dssp CCCEEETTSSCEEE------CCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE-----------------E
T ss_pred eEEEEeCCCCceeE------EEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEE-----------------E
Confidence 34566666555443 788999999999999999999999999999999998764321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCC----------
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT---------- 184 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---------- 184 (279)
...|...|..+.+ +|++.+|++|+.|++|++||+++++....+..+.. .|.+++|+|+
T Consensus 230 ~~~h~~~v~~~~~-------~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~~~~~~~~ 297 (410)
T 1vyh_C 230 FTGHREWVRMVRP-------NQDGTLIASCSNDQTVRVWVVATKECKAELREHRH-----VVECISWAPESSYSSISEAT 297 (410)
T ss_dssp EECCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-----CEEEEEECCSCGGGGGGGCC
T ss_pred EeCCCccEEEEEE-------CCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCc-----eEEEEEEcCcccccchhhhc
Confidence 3356667888876 77899999999999999999999999888887776 8999999996
Q ss_pred ----------CCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC
Q 023672 185 ----------GTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (279)
Q Consensus 185 ----------~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~ 253 (279)
+.++++| .|+.|++||++++ .....+ .+|...|.+++|+| ++.+|++|+.||.|++||++
T Consensus 298 ~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~----~~~~~~----~~h~~~v~~v~~~~-~g~~l~s~s~D~~i~vwd~~ 368 (410)
T 1vyh_C 298 GSETKKSGKPGPFLLSGSRDKTIKMWDVSTG----MCLMTL----VGHDNWVRGVLFHS-GGKFILSCADDKTLRVWDYK 368 (410)
T ss_dssp SCC-------CCEEEEEETTSEEEEEETTTT----EEEEEE----ECCSSCEEEEEECS-SSSCEEEEETTTEEEEECCT
T ss_pred cccccccCCCCCEEEEEeCCCeEEEEECCCC----ceEEEE----ECCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECC
Confidence 5678866 9999999999984 333444 68899999999999 99999999999999999999
Q ss_pred CCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 254 NMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 254 ~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+++++..+.+|...|++++|+|+|.+
T Consensus 369 ~~~~~~~~~~h~~~v~~l~~~~~~~~ 394 (410)
T 1vyh_C 369 NKRCMKTLNAHEHFVTSLDFHKTAPY 394 (410)
T ss_dssp TSCCCEEEECCSSCEEEEEECSSSSC
T ss_pred CCceEEEEcCCCCcEEEEEEcCCCCE
Confidence 99999999999999999999999864
No 5
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=5.2e-34 Score=225.21 Aligned_cols=220 Identities=18% Similarity=0.325 Sum_probs=168.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCcccccc-----------ccc--
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDV-----------NAC-- 101 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~-----------~~~-- 101 (279)
.+++||..++.... .+..|...|.+++|+|++++|++|+.|+.|++|++.+....... ..+
T Consensus 78 ~v~iWd~~~~~~~~------~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~ 151 (340)
T 1got_B 78 KLIIWDSYTTNKVH------AIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRF 151 (340)
T ss_dssp EEEEEETTTCCEEE------EEECSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEE
T ss_pred cEEEEECCCCCcce------EeecCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEE
Confidence 45567766665543 56779999999999999999999999999999999765311000 000
Q ss_pred -----cccCCCCcccc----------eeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEec
Q 023672 102 -----SLAKDQDSYEA----------SLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRA 166 (279)
Q Consensus 102 -----~~~~~~~~~~~----------~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~ 166 (279)
......+..+. .....|...|.+++| +|++.++++|+.|+.|++||+++++....+..
T Consensus 152 ~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~ 224 (340)
T 1got_B 152 LDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSL-------APDTRLFVSGACDASAKLWDVREGMCRQTFTG 224 (340)
T ss_dssp EETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred CCCCcEEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEE-------CCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC
Confidence 00001111111 111234445666655 78899999999999999999999999988888
Q ss_pred cCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC
Q 023672 167 YDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ 245 (279)
Q Consensus 167 ~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg 245 (279)
|.. .|.+++|+|++++++++ .|+.|++||+++. .....+. ...+...|.+++|+| ++.+|++|+.|+
T Consensus 225 h~~-----~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~----~~~~~~~--~~~~~~~v~~~~~s~-~g~~l~~g~~d~ 292 (340)
T 1got_B 225 HES-----DINAICFFPNGNAFATGSDDATCRLFDLRAD----QELMTYS--HDNIICGITSVSFSK-SGRLLLAGYDDF 292 (340)
T ss_dssp CSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTT----EEEEEEC--CTTCCSCEEEEEECT-TSSEEEEEETTS
T ss_pred CcC-----CEEEEEEcCCCCEEEEEcCCCcEEEEECCCC----cEEEEEc--cCCcccceEEEEECC-CCCEEEEECCCC
Confidence 776 89999999999999966 9999999999873 2222221 134455799999999 999999999999
Q ss_pred cEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 246 TSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 246 ~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.|++||+.+++.+..+.+|.++|.+++|+|||++
T Consensus 293 ~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~ 326 (340)
T 1got_B 293 NCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMA 326 (340)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEEEEECTTSSC
T ss_pred eEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCE
Confidence 9999999999999999999999999999999974
No 6
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=4.4e-34 Score=222.17 Aligned_cols=202 Identities=16% Similarity=0.250 Sum_probs=168.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.++.... .+.+|...|.+++|+|++++|++|+.|++|++||+.+++... .
T Consensus 36 ~v~lWd~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~-----------------~ 92 (304)
T 2ynn_A 36 RVELWNYETQVEVR------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVV-----------------D 92 (304)
T ss_dssp EEEEEETTTTEEEE------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEE-----------------E
T ss_pred cEEEEECCCCceeE------EeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEECCCCcEEE-----------------E
Confidence 67899998877654 667899999999999999999999999999999998764321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCC-eeeEEEeccCccccccceeeEEECC-CCCEEEEe-
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAG- 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~- 191 (279)
...|...|.+++| +|++.+|++|+.|++|++||++++ .....+..|.. .|.+++|+| ++..+++|
T Consensus 93 ~~~h~~~v~~~~~-------~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 93 FEAHPDYIRSIAV-------HPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEH-----FVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp EECCSSCEEEEEE-------CSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCS-----CEEEEEECTTCTTEEEEEE
T ss_pred EeCCCCcEEEEEE-------cCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCC-----cEEEEEECCCCCCEEEEEe
Confidence 3457778999987 678899999999999999999887 45566776665 899999999 56788866
Q ss_pred cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccC-CCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEE
Q 023672 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT-HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH 270 (279)
Q Consensus 192 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~-~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 270 (279)
.|+.|++||++....... +. .+|...+..++|+|. ++.+|++|+.|++|++||+++++++..+.+|...|.+
T Consensus 161 ~D~~v~iwd~~~~~~~~~----~~---~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~ 233 (304)
T 2ynn_A 161 LDRTVKVWSLGQSTPNFT----LT---TGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSF 233 (304)
T ss_dssp TTSEEEEEETTCSSCSEE----EE---CCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEE
T ss_pred CCCeEEEEECCCCCccce----ec---cCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEE
Confidence 999999999987422211 11 356678999999862 5679999999999999999999999999999999999
Q ss_pred EEEccCCC
Q 023672 271 VSKLSSAY 278 (279)
Q Consensus 271 ~~~spdg~ 278 (279)
++|+|+++
T Consensus 234 ~~~~p~~~ 241 (304)
T 2ynn_A 234 AVFHPTLP 241 (304)
T ss_dssp EEECSSSS
T ss_pred EEECCCCC
Confidence 99999985
No 7
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=3.8e-34 Score=242.52 Aligned_cols=224 Identities=13% Similarity=0.161 Sum_probs=167.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccc--c-------ccccccC
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYD--V-------NACSLAK 105 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~--~-------~~~~~~~ 105 (279)
.+.+|++.++.... .+.+|.+.|++++|+|+|++||+|+.||+|+|||+.++..... . ....+.+
T Consensus 40 ~v~l~~~~~~~~~~------~~~~h~~~v~~~~~spdg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~ 113 (611)
T 1nr0_A 40 SVYTVPVGSLTDTE------IYTEHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDS 113 (611)
T ss_dssp EEEEEETTCSSCCE------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECT
T ss_pred EEEEecCCCcccCe------EecCCCCceEEEEECCCCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECC
Confidence 56788887766554 6789999999999999999999999999999999965432100 0 0000000
Q ss_pred CCCccc---------------------ceeeecCCCceEEEEeeCcccccCCCCc-EEEEecCCCcEEEEECCCCeeeEE
Q 023672 106 DQDSYE---------------------ASLVVTEGESVYDFCWFPHMSASDPTSC-VFASTTRDHPIHLWDATTGLLRCT 163 (279)
Q Consensus 106 ~~~~~~---------------------~~~~~~~~~~v~~~~~~~~~~~~~~~~~-~l~s~~~d~~i~i~d~~~~~~~~~ 163 (279)
..... ......|...|.+++| +|++. .|++|+.|++|++||..+++....
T Consensus 114 -dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f-------~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~ 185 (611)
T 1nr0_A 114 -ESKRIAAVGEGRERFGHVFLFDTGTSNGNLTGQARAMNSVDF-------KPSRPFRIISGSDDNTVAIFEGPPFKFKST 185 (611)
T ss_dssp -TSCEEEEEECCSSCSEEEEETTTCCBCBCCCCCSSCEEEEEE-------CSSSSCEEEEEETTSCEEEEETTTBEEEEE
T ss_pred -CCCEEEEEECCCCceeEEEEeeCCCCcceecCCCCCceEEEE-------CCCCCeEEEEEeCCCeEEEEECCCCeEeee
Confidence 00000 0011234556777766 66765 599999999999999999998888
Q ss_pred EeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEe
Q 023672 164 YRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 164 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~ 242 (279)
+..|.. .|.+++|+|++++|+++ .|+.|++||+.++ .....+........+|...|.+++|+| ++.+|++++
T Consensus 186 l~~H~~-----~V~~v~fspdg~~las~s~D~~i~lwd~~~g-~~~~~~~~~~~~~~~h~~~V~~v~~sp-dg~~l~s~s 258 (611)
T 1nr0_A 186 FGEHTK-----FVHSVRYNPDGSLFASTGGDGTIVLYNGVDG-TKTGVFEDDSLKNVAHSGSVFGLTWSP-DGTKIASAS 258 (611)
T ss_dssp ECCCSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTC-CEEEECBCTTSSSCSSSSCEEEEEECT-TSSEEEEEE
T ss_pred eccccC-----ceEEEEECCCCCEEEEEECCCcEEEEECCCC-cEeeeeccccccccccCCCEEEEEECC-CCCEEEEEe
Confidence 888776 89999999999999966 9999999999874 222211110011127999999999999 899999999
Q ss_pred CCCcEEEEecCCCeEEEE-------------------------------------------EeecCCCEEEEEEccCCCC
Q 023672 243 YSQTSAIYREDNMELLYV-------------------------------------------LHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 243 ~dg~i~~wd~~~~~~~~~-------------------------------------------~~~~~~~v~~~~~spdg~~ 279 (279)
.|++|++||+++++++.. +.+|...|++++|+|||++
T Consensus 259 ~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~ 338 (611)
T 1nr0_A 259 ADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKT 338 (611)
T ss_dssp TTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred CCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCE
Confidence 999999999998765543 3478889999999999974
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-34 Score=224.84 Aligned_cols=203 Identities=18% Similarity=0.214 Sum_probs=169.7
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++|++...... ....+.+|...|.+++|++++.++++++.|++|++||+.++.... .
T Consensus 59 ~v~vW~~~~~~~~----~~~~l~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~-----------------~ 117 (321)
T 3ow8_A 59 LVKVWKWRDERLD----LQWSLEGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIK-----------------S 117 (321)
T ss_dssp CEEEEEEETTEEE----EEEEECCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-----------------E
T ss_pred CEEEEECCCCCee----eeeeeccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEE-----------------E
Confidence 4566776544321 223578999999999999999999999999999999998764321 1
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...+...+..++| +|++++|++++.|+.|++||+++++....+..+.. .+.+++|+|++++|+++ .|
T Consensus 118 ~~~~~~~~~~~~~-------spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~~-----~v~~~~~spdg~~lasg~~d 185 (321)
T 3ow8_A 118 IDAGPVDAWTLAF-------SPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRGK-----FILSIAYSPDGKYLASGAID 185 (321)
T ss_dssp EECCTTCCCCEEE-------CTTSSEEEEECTTSEEEEEETTTCSEEEEEECSSS-----CEEEEEECTTSSEEEEEETT
T ss_pred EeCCCccEEEEEE-------CCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCCc-----eEEEEEECCCCCEEEEEcCC
Confidence 1223345666655 78999999999999999999999998888877665 89999999999999976 99
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
+.|++||++++ +....+ .+|..+|.+++|+| ++.+|++|+.|+.|++||+++++++..+.+|...|.+++|
T Consensus 186 g~i~iwd~~~~----~~~~~~----~~h~~~v~~l~~sp-d~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~ 256 (321)
T 3ow8_A 186 GIINIFDIATG----KLLHTL----EGHAMPIRSLTFSP-DSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAF 256 (321)
T ss_dssp SCEEEEETTTT----EEEEEE----CCCSSCCCEEEECT-TSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEE
T ss_pred CeEEEEECCCC----cEEEEE----cccCCceeEEEEcC-CCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEE
Confidence 99999999874 333344 68899999999999 8999999999999999999999999999999999999999
Q ss_pred ccCCCC
Q 023672 274 LSSAYT 279 (279)
Q Consensus 274 spdg~~ 279 (279)
+|+|++
T Consensus 257 sp~~~~ 262 (321)
T 3ow8_A 257 CPDDTH 262 (321)
T ss_dssp CTTSSE
T ss_pred CCCCCE
Confidence 999863
No 9
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=3.6e-34 Score=222.70 Aligned_cols=204 Identities=15% Similarity=0.219 Sum_probs=169.3
Q ss_pred eeeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 34 WPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 34 ~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
-.+++||+.+++... .+.+|.+.|.+++|+|++++|++|+.|++|++||+.++... ..
T Consensus 77 ~~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~----------------~~ 134 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVV------DFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWAL----------------EQ 134 (304)
T ss_dssp SEEEEEETTTCCEEE------EEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEE----------------EE
T ss_pred CEEEEEECCCCcEEE------EEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcch----------------hh
Confidence 367899998887665 67789999999999999999999999999999999754211 11
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECC--CCCEEEEe
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP--TGTKIFAG 191 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~--~~~~l~~~ 191 (279)
....|...|.+++|+|. ++..|++|+.|++|++||++++.....+..+.. ..+..+.|+| ++.+++++
T Consensus 135 ~~~~h~~~v~~v~~~p~------~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~----~~v~~~~~~~~~~~~~l~s~ 204 (304)
T 2ynn_A 135 TFEGHEHFVMCVAFNPK------DPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQE----RGVNYVDYYPLPDKPYMITA 204 (304)
T ss_dssp EECCCCSCEEEEEECTT------CTTEEEEEETTSEEEEEETTCSSCSEEEECCCT----TCEEEEEECCSTTCCEEEEE
T ss_pred hhcccCCcEEEEEECCC------CCCEEEEEeCCCeEEEEECCCCCccceeccCCc----CcEEEEEEEEcCCCCEEEEE
Confidence 33457778999988442 578999999999999999988876666553321 2678889887 67788866
Q ss_pred -cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEE
Q 023672 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH 270 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 270 (279)
.|+.|++||++++ +....+ .+|...|.+++|+| ++.+|++|+.||+|++||+.+++++..+..|...+++
T Consensus 205 s~D~~i~iWd~~~~----~~~~~~----~~h~~~v~~~~~~p-~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~ 275 (304)
T 2ynn_A 205 SDDLTIKIWDYQTK----SCVATL----EGHMSNVSFAVFHP-TLPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWC 275 (304)
T ss_dssp ETTSEEEEEETTTT----EEEEEE----ECCSSCEEEEEECS-SSSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEE
T ss_pred cCCCeEEEEeCCCC----ccceee----CCCCCCEEEEEECC-CCCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEE
Confidence 9999999999974 344444 68999999999999 8999999999999999999999999999999999999
Q ss_pred EEEccCCC
Q 023672 271 VSKLSSAY 278 (279)
Q Consensus 271 ~~~spdg~ 278 (279)
++|+|+|+
T Consensus 276 ~~~~~~~~ 283 (304)
T 2ynn_A 276 IATHPTGR 283 (304)
T ss_dssp EEECTTCG
T ss_pred EEECCCCC
Confidence 99999874
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.3e-34 Score=227.00 Aligned_cols=189 Identities=14% Similarity=0.210 Sum_probs=153.7
Q ss_pred CCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC
Q 023672 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (279)
.|...|.+++|+|++ .|++|+.||+|+|||+.+++..... ......|...|.+++| +|+
T Consensus 80 ~~~~~v~~~~~s~d~-~l~~~s~dg~v~lWd~~~~~~~~~~-------------~~~~~~H~~~V~~v~~-------spd 138 (344)
T 4gqb_B 80 QTEAGVADLTWVGER-GILVASDSGAVELWELDENETLIVS-------------KFCKYEHDDIVSTVSV-------LSS 138 (344)
T ss_dssp EESSCEEEEEEETTT-EEEEEETTSEEEEEEECTTSSCEEE-------------EEEEECCSSCEEEEEE-------CTT
T ss_pred ccCCCEEEEEEeCCC-eEEEEECCCEEEEEeccCCCceeEe-------------eccccCCCCCEEEEEE-------CCC
Confidence 356789999999985 6889999999999999876432111 1123467789999987 778
Q ss_pred CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCC-EEEEe-cCCeEEEEEccCCCCceeeeeecc
Q 023672 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFAG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
+++|++|+.|++|++||+++++.+..+..|.. .|.+++|+|++. +++++ .|+.|++||++++ +.... +.
T Consensus 139 g~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~-----~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~-~~~~~---~~ 209 (344)
T 4gqb_B 139 GTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA-----QVTCVAASPHKDSVFLSCSEDNRILLWDTRCP-KPASQ---IG 209 (344)
T ss_dssp SSEEEEEETTSCEEEEETTTTEEEEEECCCSS-----CEEEEEECSSCTTEEEEEETTSCEEEEETTSS-SCEEE---CC
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC-----ceEEEEecCCCCCceeeecccccccccccccc-ceeee---ee
Confidence 99999999999999999999999999988876 999999999985 55655 9999999999984 32222 21
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
. ..+...+.+++|+|+++.+|++|+.||.|++||+++++++..+.+|...|++++|+|||.
T Consensus 210 ~--~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~ 270 (344)
T 4gqb_B 210 C--SAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSV 270 (344)
T ss_dssp ------CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSS
T ss_pred c--ceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCC
Confidence 1 345567999999997778999999999999999999999999999999999999999984
No 11
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=6e-34 Score=225.95 Aligned_cols=191 Identities=19% Similarity=0.284 Sum_probs=162.2
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|.+.|.+++|+|++..|++++.|++|++||++++.... ....|...|.++.+.|
T Consensus 149 ~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~-----------------~~~~h~~~v~~~~~~~----- 206 (354)
T 2pbi_B 149 SVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQ-----------------SFHGHGADVLCLDLAP----- 206 (354)
T ss_dssp EEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEE-----------------EEECCSSCEEEEEECC-----
T ss_pred eeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEE-----------------EEcCCCCCeEEEEEEe-----
Confidence 556799999999999999999999999999999998764321 2345667888888744
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeee
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~ 213 (279)
++++.+|++|+.|+.|++||+++++++..+..|.. .|.+++|+|++.+++++ .|+.|++||++.. . ....
T Consensus 207 ~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~-~---~~~~ 277 (354)
T 2pbi_B 207 SETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES-----DVNSVRYYPSGDAFASGSDDATCRLYDLRAD-R---EVAI 277 (354)
T ss_dssp CSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS-----CEEEEEECTTSSEEEEEETTSCEEEEETTTT-E---EEEE
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC-----CeEEEEEeCCCCEEEEEeCCCeEEEEECCCC-c---EEEE
Confidence 45678999999999999999999999998887776 89999999999999966 9999999999873 2 2222
Q ss_pred cccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+. ...+...+.+++|+| ++.+|++|+.|+.|++||+.+++.+..+.+|.+.|++++|+|||++
T Consensus 278 ~~--~~~~~~~~~~~~~s~-~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~ 340 (354)
T 2pbi_B 278 YS--KESIIFGASSVDFSL-SGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTA 340 (354)
T ss_dssp EC--CTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSC
T ss_pred Ec--CCCcccceeEEEEeC-CCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCE
Confidence 21 123445789999999 9999999999999999999999999999999999999999999975
No 12
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=4.1e-34 Score=226.22 Aligned_cols=196 Identities=21% Similarity=0.338 Sum_probs=162.2
Q ss_pred eeeccCCCCC-ceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCc
Q 023672 52 QFRTSSIPNN-FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (279)
Q Consensus 52 ~~~~~~~h~~-~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (279)
....+.+|.+ .|.+++|+|++++||+|+.|++|+|||+.++..... ......|...|.+++|
T Consensus 7 ~~~~~~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~--------------~~~~~~h~~~v~~~~~--- 69 (345)
T 3fm0_A 7 LLGRVPAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICK--------------SVLSEGHQRTVRKVAW--- 69 (345)
T ss_dssp EEEEECCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEE--------------EEECSSCSSCEEEEEE---
T ss_pred EeeeecCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceee--------------eeeccccCCcEEEEEE---
Confidence 3447788988 999999999999999999999999999976532100 0122457778999987
Q ss_pred ccccCCCCcEEEEecCCCcEEEEECCCCe--eeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCc
Q 023672 131 MSASDPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRD 207 (279)
Q Consensus 131 ~~~~~~~~~~l~s~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~ 207 (279)
+|++++|++|+.|++|++||+.++. .+..+..|.. .|.+++|+|++++|+++ .|+.|++||++.. ..
T Consensus 70 ----sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~-----~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~-~~ 139 (345)
T 3fm0_A 70 ----SPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHEN-----EVKSVAWAPSGNLLATCSRDKSVWVWEVDEE-DE 139 (345)
T ss_dssp ----CTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSS-----CEEEEEECTTSSEEEEEETTSCEEEEEECTT-SC
T ss_pred ----CCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCC-----CceEEEEeCCCCEEEEEECCCeEEEEECCCC-CC
Confidence 7789999999999999999998764 4566776665 89999999999999966 9999999999873 33
Q ss_pred eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCe--EEEEEeecCCCEEEEEEccCCCC
Q 023672 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
......+ .+|...|.+++|+| ++.+|++|+.|+.|++||.++++ +...+.+|...|++++|+|+|++
T Consensus 140 ~~~~~~~----~~h~~~v~~~~~~p-~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~ 208 (345)
T 3fm0_A 140 YECVSVL----NSHTQDVKHVVWHP-SQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQR 208 (345)
T ss_dssp EEEEEEE----CCCCSCEEEEEECS-SSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSE
T ss_pred eEEEEEe----cCcCCCeEEEEECC-CCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCE
Confidence 3333344 68899999999999 89999999999999999998875 45788899999999999999974
No 13
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.7e-33 Score=222.22 Aligned_cols=190 Identities=13% Similarity=0.200 Sum_probs=160.5
Q ss_pred eeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcc
Q 023672 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (279)
Q Consensus 52 ~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (279)
....+.+|.+.|.+++|+|++++|++|+.||+|+|||+.++.... ....+...|.+++|
T Consensus 47 ~~~~l~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~-----------------~~~~~~~~v~~~~~---- 105 (340)
T 1got_B 47 TRRTLRGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVH-----------------AIPLRSSWVMTCAY---- 105 (340)
T ss_dssp EEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEE-----------------EEECSSSCEEEEEE----
T ss_pred hheeecCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcce-----------------EeecCCccEEEEEE----
Confidence 345788999999999999999999999999999999998654321 22345667888877
Q ss_pred cccCCCCcEEEEecCCCcEEEEECCCCe----eeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCc
Q 023672 132 SASDPTSCVFASTTRDHPIHLWDATTGL----LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRD 207 (279)
Q Consensus 132 ~~~~~~~~~l~s~~~d~~i~i~d~~~~~----~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~ 207 (279)
+|++.+|++|+.|+.|++||+.++. ....+..|.. .|.++.|++++.+++++.|+.|++||++++
T Consensus 106 ---s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~--- 174 (340)
T 1got_B 106 ---APSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTG-----YLSCCRFLDDNQIVTSSGDTTCALWDIETG--- 174 (340)
T ss_dssp ---CTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSS-----CEEEEEEEETTEEEEEETTSCEEEEETTTT---
T ss_pred ---CCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCc-----cEEEEEECCCCcEEEEECCCcEEEEECCCC---
Confidence 7789999999999999999998753 4455555554 899999999887555669999999999874
Q ss_pred eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.....+ .+|...|.+++|+| ++.+|++|+.|+.|++||++++.++..+.+|...|++++|+|+|++
T Consensus 175 -~~~~~~----~~h~~~v~~~~~~~-~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 240 (340)
T 1got_B 175 -QQTTTF----TGHTGDVMSLSLAP-DTRLFVSGACDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNA 240 (340)
T ss_dssp -EEEEEE----CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSE
T ss_pred -cEEEEE----cCCCCceEEEEECC-CCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCE
Confidence 333344 68999999999999 8999999999999999999999999999999999999999999863
No 14
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=4.6e-34 Score=226.83 Aligned_cols=206 Identities=17% Similarity=0.195 Sum_probs=156.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.+++...... ....+|.+.|++++|+|++++|++|+.|++|++||+.++.... .
T Consensus 116 ~v~lWd~~~~~~~~~~~--~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~-----------------~ 176 (357)
T 4g56_B 116 AVELWEILEKESLLVNK--FAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLK-----------------S 176 (357)
T ss_dssp CEEEC--------CCCC--EEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEE-----------------E
T ss_pred EEEEeeccccceeEEEe--eccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEE-----------------E
Confidence 57788887776543211 1355899999999999999999999999999999998764321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCC-cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCC-CEEEEe-
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG-TKIFAG- 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~l~~~- 191 (279)
...|...|.+++| ++++ .++++++.|+.|++||+++++....+..... ...+.+++|+|++ .++++|
T Consensus 177 ~~~h~~~v~~v~~-------s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~---~~~v~~v~~sp~~~~~la~g~ 246 (357)
T 4g56_B 177 YNAHSSEVNCVAA-------CPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCAS---DTIPTSVTWHPEKDDTFACGD 246 (357)
T ss_dssp ECCCSSCEEEEEE-------CTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTC---CSCEEEEEECTTSTTEEEEEE
T ss_pred EcCCCCCEEEEEE-------ccCCCceeeeeccCCceEEEECCCCceeeeeeeccc---cccccchhhhhcccceEEEee
Confidence 2346678999887 4455 4789999999999999999887665543322 1268899999985 567766
Q ss_pred cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEE
Q 023672 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHV 271 (279)
Q Consensus 192 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 271 (279)
.|+.|++||++++ +....+ .+|...|.+++|+|+++.+|++|+.|++|+|||+++++++..+ +|.+.|+++
T Consensus 247 ~d~~i~~wd~~~~----~~~~~~----~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~~-~H~~~V~~v 317 (357)
T 4g56_B 247 ETGNVSLVNIKNP----DSAQTS----AVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRDL-SHRDFVTGV 317 (357)
T ss_dssp SSSCEEEEESSCG----GGCEEE----CCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEEC-CCSSCEEEE
T ss_pred cccceeEEECCCC----cEeEEE----eccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEEC-CCCCCEEEE
Confidence 8999999999874 222233 6888999999999955578999999999999999999887655 699999999
Q ss_pred EEcc-CCC
Q 023672 272 SKLS-SAY 278 (279)
Q Consensus 272 ~~sp-dg~ 278 (279)
+|+| ||+
T Consensus 318 afsP~d~~ 325 (357)
T 4g56_B 318 AWSPLDHS 325 (357)
T ss_dssp EECSSSTT
T ss_pred EEeCCCCC
Confidence 9999 665
No 15
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.5e-33 Score=220.41 Aligned_cols=207 Identities=17% Similarity=0.242 Sum_probs=161.3
Q ss_pred eeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccc-------cccC--------CCCc-------
Q 023672 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC-------SLAK--------DQDS------- 109 (279)
Q Consensus 52 ~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~-------~~~~--------~~~~------- 109 (279)
....+.+|.+.|++++|+|++++|++|+.||+|+|||..++......... ...+ ..+.
T Consensus 56 ~~~~l~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 56 TRRTLKGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEEEecCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 34578899999999999999999999999999999998776542211100 0000 0000
Q ss_pred ---------ccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEE
Q 023672 110 ---------YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA 180 (279)
Q Consensus 110 ---------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~ 180 (279)
........|...|..+.| +|++..|++++.|++|++||+++++.+..+..|.. .|.+++
T Consensus 136 ~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~-----~v~~~~ 203 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAMHTNYLSACSF-------TNSDMQILTASGDGTCALWDVESGQLLQSFHGHGA-----DVLCLD 203 (354)
T ss_dssp CCCTTCCSGGGCEEEEECSSCEEEEEE-------CSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEE
T ss_pred eccccccccccceeeeccCCcEEEEEE-------eCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC-----CeEEEE
Confidence 011122245566777766 77888999999999999999999999999988776 889999
Q ss_pred ECCC--CCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeE
Q 023672 181 FNPT--GTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL 257 (279)
Q Consensus 181 ~~~~--~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~ 257 (279)
|+|+ ++++++| .|+.|++||++++ .....+ .+|...|.+++|+| ++.+|++|+.|++|++||+++++.
T Consensus 204 ~~~~~~g~~l~sgs~Dg~v~~wd~~~~----~~~~~~----~~h~~~v~~v~~~p-~~~~l~s~s~D~~v~lwd~~~~~~ 274 (354)
T 2pbi_B 204 LAPSETGNTFVSGGCDKKAMVWDMRSG----QCVQAF----ETHESDVNSVRYYP-SGDAFASGSDDATCRLYDLRADRE 274 (354)
T ss_dssp ECCCSSCCEEEEEETTSCEEEEETTTC----CEEEEE----CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTTEE
T ss_pred EEeCCCCCEEEEEeCCCeEEEEECCCC----cEEEEe----cCCCCCeEEEEEeC-CCCEEEEEeCCCeEEEEECCCCcE
Confidence 9874 6788866 9999999999984 233333 68899999999999 899999999999999999999988
Q ss_pred EEEEeecC--CCEEEEEEccCCCC
Q 023672 258 LYVLHGQE--GGVTHVSKLSSAYT 279 (279)
Q Consensus 258 ~~~~~~~~--~~v~~~~~spdg~~ 279 (279)
+..+..+. ..+.+++|+|+|++
T Consensus 275 ~~~~~~~~~~~~~~~~~~s~~g~~ 298 (354)
T 2pbi_B 275 VAIYSKESIIFGASSVDFSLSGRL 298 (354)
T ss_dssp EEEECCTTCCSCEEEEEECTTSSE
T ss_pred EEEEcCCCcccceeEEEEeCCCCE
Confidence 77776443 47899999999863
No 16
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2e-33 Score=225.14 Aligned_cols=212 Identities=19% Similarity=0.289 Sum_probs=157.1
Q ss_pred eeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCcccccccc-------ccccC--------CCCccc------
Q 023672 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA-------CSLAK--------DQDSYE------ 111 (279)
Q Consensus 53 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-------~~~~~--------~~~~~~------ 111 (279)
.+++.+|.+.|++++|+|++++|++|+.||+|+|||+.++........ +.+.+ ..+..+
T Consensus 59 ~~~l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~ 138 (380)
T 3iz6_a 59 CRTLQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLS 138 (380)
T ss_dssp EEEECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECC
T ss_pred eecccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECC
Confidence 347899999999999999999999999999999999987654322110 00000 001100
Q ss_pred -----------ceeeecCCCceEEEEeeCcccccCCC-CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeE
Q 023672 112 -----------ASLVVTEGESVYDFCWFPHMSASDPT-SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSV 179 (279)
Q Consensus 112 -----------~~~~~~~~~~v~~~~~~~~~~~~~~~-~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~ 179 (279)
......|...+.++.| .|+ +..|++|+.|++|++||+++++.+..+......++...|.++
T Consensus 139 ~~~~~~~~~~~~~~~~gh~~~v~~~~~-------~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~ 211 (380)
T 3iz6_a 139 SQADRDGNMPVSRVLTGHKGYASSCQY-------VPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSL 211 (380)
T ss_dssp CCSSCCCSSTTCCBCCCCSSCCCCCBC-------CSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEE
T ss_pred CCccccCCccceeeccCCCcceEEEEE-------ecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEE
Confidence 0111233344444444 444 457999999999999999999988877433323344489999
Q ss_pred EECC-CCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeE
Q 023672 180 AFNP-TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL 257 (279)
Q Consensus 180 ~~~~-~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~ 257 (279)
+|++ ++.++++| .|+.|++||++...... ..+ .+|...|.+++|+| ++.+|++|+.||+|++||++++++
T Consensus 212 ~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~---~~~----~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~lwd~~~~~~ 283 (380)
T 3iz6_a 212 SINSLNANMFISGSCDTTVRLWDLRITSRAV---RTY----HGHEGDINSVKFFP-DGQRFGTGSDDGTCRLFDMRTGHQ 283 (380)
T ss_dssp EECSSSCCEEEEEETTSCEEEEETTTTCCCC---EEE----CCCSSCCCEEEECT-TSSEEEEECSSSCEEEEETTTTEE
T ss_pred EeecCCCCEEEEEECCCeEEEEECCCCCcce---EEE----CCcCCCeEEEEEec-CCCeEEEEcCCCeEEEEECCCCcE
Confidence 9987 77888866 99999999998533322 223 68999999999999 899999999999999999999999
Q ss_pred EEEEeecCC-------CEEEEEEccCCCC
Q 023672 258 LYVLHGQEG-------GVTHVSKLSSAYT 279 (279)
Q Consensus 258 ~~~~~~~~~-------~v~~~~~spdg~~ 279 (279)
+..+..+.. .|++++|+|+|++
T Consensus 284 ~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 312 (380)
T 3iz6_a 284 LQVYNREPDRNDNELPIVTSVAFSISGRL 312 (380)
T ss_dssp EEEECCCCSSSCCSSCSCSEEEECSSSSE
T ss_pred EEEecccccccccccCceEEEEECCCCCE
Confidence 888865432 4899999999974
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=5.2e-33 Score=217.54 Aligned_cols=195 Identities=16% Similarity=0.246 Sum_probs=163.0
Q ss_pred eeeccCCCCCceEEEEEccCC-CeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCc
Q 023672 52 QFRTSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPH 130 (279)
Q Consensus 52 ~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 130 (279)
...++.+|.+.|++++|+|++ ++|++|+.|++|++|++....... .........|...|.+++|
T Consensus 9 l~~~l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~------------~~~~~~~~~h~~~v~~~~~--- 73 (319)
T 3frx_A 9 LRGTLEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKF------------GVPVRSFKGHSHIVQDCTL--- 73 (319)
T ss_dssp EEEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEE------------EEEEEEEECCSSCEEEEEE---
T ss_pred EEEEEccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccc------------cccceEEeCCcccEEEEEE---
Confidence 334788999999999999965 899999999999999986422100 0001133467788998877
Q ss_pred ccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCcee
Q 023672 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFE 209 (279)
Q Consensus 131 ~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~ 209 (279)
+|++.+|++|+.|++|++||+.+++.+..+..|.. .|.+++|+|++.+++++ .|+.|++||++. .
T Consensus 74 ----s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-----~ 139 (319)
T 3frx_A 74 ----TADGAYALSASWDKTLRLWDVATGETYQRFVGHKS-----DVMSVDIDKKASMIISGSRDKTIKVWTIKG-----Q 139 (319)
T ss_dssp ----CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSCEEEEEETTSCEEEEETTS-----C
T ss_pred ----CCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCC-----cEEEEEEcCCCCEEEEEeCCCeEEEEECCC-----C
Confidence 77899999999999999999999999999988876 89999999999999966 999999999975 2
Q ss_pred eeeecccccCCCCCceEEEEEccC-----CCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPT-----HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~-----~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
....+ .+|...|.+++|+|. ++..|++++.|+.|++||+++++....+.+|...|.+++|+|||++
T Consensus 140 ~~~~~----~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~ 210 (319)
T 3frx_A 140 CLATL----LGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTL 210 (319)
T ss_dssp EEEEE----CCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSE
T ss_pred eEEEE----eccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCE
Confidence 33333 688999999999992 2348999999999999999999999999999999999999999974
No 18
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=9.9e-33 Score=215.97 Aligned_cols=204 Identities=18% Similarity=0.258 Sum_probs=164.7
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++|++...... .......+.+|...|.+++|+|++++|++|+.|++|+|||+.+++... .
T Consensus 41 ~v~~W~~~~~~~~-~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~-----------------~ 102 (319)
T 3frx_A 41 TLISWKLTGDDQK-FGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQ-----------------R 102 (319)
T ss_dssp EEEEEEEEEETTE-EEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-----------------E
T ss_pred cEEEecCCCCCcc-ccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeE-----------------E
Confidence 5667776543221 112334678999999999999999999999999999999998764321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCC------CEE
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG------TKI 188 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~------~~l 188 (279)
...|...|.++.| +|++.+|++|+.|++|++||++ ++.+..+..+.. .|.++.|+|.+ ..+
T Consensus 103 ~~~h~~~v~~~~~-------~~~~~~l~s~s~D~~i~vwd~~-~~~~~~~~~h~~-----~v~~~~~~~~~~~~~~~~~l 169 (319)
T 3frx_A 103 FVGHKSDVMSVDI-------DKKASMIISGSRDKTIKVWTIK-GQCLATLLGHND-----WVSQVRVVPNEKADDDSVTI 169 (319)
T ss_dssp EECCSSCEEEEEE-------CTTSCEEEEEETTSCEEEEETT-SCEEEEECCCSS-----CEEEEEECCC------CCEE
T ss_pred EccCCCcEEEEEE-------cCCCCEEEEEeCCCeEEEEECC-CCeEEEEeccCC-----cEEEEEEccCCCCCCCccEE
Confidence 3456778999877 7789999999999999999997 456667766665 89999999854 467
Q ss_pred EEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCC
Q 023672 189 FAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGG 267 (279)
Q Consensus 189 ~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~ 267 (279)
+++ .|+.|++||+++. .....+ .+|...|.+++|+| ++.+|++|+.||.|++||+++++++..+..+ ..
T Consensus 170 ~s~~~d~~i~~wd~~~~----~~~~~~----~~h~~~v~~~~~sp-~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~ 239 (319)
T 3frx_A 170 ISAGNDKMVKAWNLNQF----QIEADF----IGHNSNINTLTASP-DGTLIASAGKDGEIMLWNLAAKKAMYTLSAQ-DE 239 (319)
T ss_dssp EEEETTSCEEEEETTTT----EEEEEE----CCCCSCEEEEEECT-TSSEEEEEETTCEEEEEETTTTEEEEEEECC-SC
T ss_pred EEEeCCCEEEEEECCcc----hhheee----cCCCCcEEEEEEcC-CCCEEEEEeCCCeEEEEECCCCcEEEEecCC-Cc
Confidence 755 9999999999873 222333 68999999999999 9999999999999999999999999988854 68
Q ss_pred EEEEEEccCCCC
Q 023672 268 VTHVSKLSSAYT 279 (279)
Q Consensus 268 v~~~~~spdg~~ 279 (279)
|.+++|+|+|++
T Consensus 240 v~~~~~sp~~~~ 251 (319)
T 3frx_A 240 VFSLAFSPNRYW 251 (319)
T ss_dssp EEEEEECSSSSE
T ss_pred EEEEEEcCCCCE
Confidence 999999999863
No 19
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.3e-32 Score=216.29 Aligned_cols=191 Identities=19% Similarity=0.336 Sum_probs=153.7
Q ss_pred eeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeec-CCCceEEEEeeCcc
Q 023672 53 FRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT-EGESVYDFCWFPHM 131 (279)
Q Consensus 53 ~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~ 131 (279)
...+.+|.+.|.+++|+|+ +|++|+.|++|++||+..+... ....+... |...|.+++|
T Consensus 7 ~~~~~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~--------------~~~~~~~~~h~~~v~~v~~---- 66 (330)
T 2hes_X 7 IKSLKLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFT--------------LIDVLDETAHKKAIRSVAW---- 66 (330)
T ss_dssp EEEEECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCE--------------EEEEECTTCCCSCEEEEEE----
T ss_pred ceeeccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeE--------------EEEEEecCCccCCEEEEEE----
Confidence 4467899999999999987 9999999999999999854210 00112122 7778999988
Q ss_pred cccCCCCcEEEEecCCCcEEEEECCC-------CeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccC
Q 023672 132 SASDPTSCVFASTTRDHPIHLWDATT-------GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHR 203 (279)
Q Consensus 132 ~~~~~~~~~l~s~~~d~~i~i~d~~~-------~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~ 203 (279)
+|++.+|++|+.|++|++||+.. .+.+..+..|.. .|.+++|+|++++|+++ .|+.|++||++.
T Consensus 67 ---sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~-----~V~~v~~sp~g~~las~s~D~~v~iwd~~~ 138 (330)
T 2hes_X 67 ---RPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHEN-----EVKGVAWSNDGYYLATCSRDKSVWIWETDE 138 (330)
T ss_dssp ---CTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC---------CEEEEEECTTSCEEEEEETTSCEEEEECCT
T ss_pred ---CCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCC-----cEEEEEECCCCCEEEEEeCCCEEEEEeccC
Confidence 67899999999999999999853 345566666665 89999999999999966 999999999965
Q ss_pred CCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCC--eEEEEEeecCCCEEEEEEccC
Q 023672 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM--ELLYVLHGQEGGVTHVSKLSS 276 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~--~~~~~~~~~~~~v~~~~~spd 276 (279)
.+...+....+ .+|...|.+++|+| ++.+|++|+.|++|++||..++ +++..+.+|.+.|.+++|+|+
T Consensus 139 ~~~~~~~~~~~----~~h~~~v~~v~~~p-~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 208 (330)
T 2hes_X 139 SGEEYECISVL----QEHSQDVKHVIWHP-SEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKT 208 (330)
T ss_dssp TCCCCEEEEEE----CCCSSCEEEEEECS-SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCS
T ss_pred CCCCeEEEEEe----ccCCCceEEEEECC-CCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCC
Confidence 44444444444 68999999999999 8999999999999999999876 678899999999999999998
No 20
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=2.3e-32 Score=216.05 Aligned_cols=198 Identities=19% Similarity=0.319 Sum_probs=161.0
Q ss_pred eeeccCCCCCceEEEEE-----cc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEE
Q 023672 52 QFRTSSIPNNFLKGIKW-----SP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDF 125 (279)
Q Consensus 52 ~~~~~~~h~~~v~~~~~-----~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 125 (279)
....+.+|.+.|++++| ++ ++++|++|+.|++|++||+.+........ ........|...|.++
T Consensus 13 ~~~~l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~----------~~~~~l~~h~~~V~~~ 82 (343)
T 2xzm_R 13 KRGILEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFG----------IPHKALTGHNHFVSDL 82 (343)
T ss_dssp EEEEEECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSE----------EEEEEECCCSSCEEEE
T ss_pred eeeeeccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccc----------cccchhccCCCceEEE
Confidence 34478899999999999 77 89999999999999999997543211000 0111334577789999
Q ss_pred EeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCC
Q 023672 126 CWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (279)
Q Consensus 126 ~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~ 204 (279)
+| +|++.++++++.|++|++||+++++.+..+..|.. .|.+++|+|++++|+++ .|+.|++||+...
T Consensus 83 ~~-------~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~-----~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~ 150 (343)
T 2xzm_R 83 AL-------SQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQS-----EVYSVAFSPDNRQILSAGAEREIKLWNILGE 150 (343)
T ss_dssp EE-------CSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCS-----CEEEEEECSSTTEEEEEETTSCEEEEESSSC
T ss_pred EE-------CCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCC-----cEEEEEECCCCCEEEEEcCCCEEEEEeccCC
Confidence 87 67889999999999999999999999998888776 89999999999999965 9999999999741
Q ss_pred CCceeeeeecccccCCCCCceEEEEEccCCC----------cEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEc
Q 023672 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT----------GMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKL 274 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~----------~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~s 274 (279)
..... ....+|...|.+++|+| ++ .+|++++.|+.|++|| ...+....+.+|...|.+++|+
T Consensus 151 -----~~~~~-~~~~~~~~~v~~~~~~~-~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s 222 (343)
T 2xzm_R 151 -----CKFSS-AEKENHSDWVSCVRYSP-IMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSIS 222 (343)
T ss_dssp -----EEEEC-CTTTSCSSCEEEEEECC-CCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEEC
T ss_pred -----ceeee-ecccCCCceeeeeeecc-ccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEEC
Confidence 11111 11247888999999999 55 6899999999999999 5667788899999999999999
Q ss_pred cCCCC
Q 023672 275 SSAYT 279 (279)
Q Consensus 275 pdg~~ 279 (279)
|||++
T Consensus 223 ~~g~~ 227 (343)
T 2xzm_R 223 PNGKY 227 (343)
T ss_dssp TTSSE
T ss_pred CCCCE
Confidence 99974
No 21
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.9e-32 Score=212.01 Aligned_cols=188 Identities=22% Similarity=0.375 Sum_probs=162.1
Q ss_pred eccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
..+.+|.+.|++++|+|++++|++|+.||.|++|++.++.... ....|...|.+++|
T Consensus 17 ~~~~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~-----------------~~~~h~~~v~~~~~------ 73 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEK-----------------TISGHKLGISDVAW------ 73 (312)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-----------------EECCCSSCEEEEEE------
T ss_pred EEEcccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccch-----------------hhccCCCceEEEEE------
Confidence 3788999999999999999999999999999999998654321 23346678888887
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeee
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~ 212 (279)
+|++++|++++.|+.|++||+++++.+..+..+.. .|.+++|+|++++++++ .|+.|++||++++ +...
T Consensus 74 -~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~----~~~~ 143 (312)
T 4ery_A 74 -SSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSN-----YVFCCNFNPQSNLIVSGSFDESVRIWDVKTG----KCLK 143 (312)
T ss_dssp -CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECSSSSEEEEEETTSCEEEEETTTC----CEEE
T ss_pred -cCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCCCcEEEEECCCC----EEEE
Confidence 77899999999999999999999999998888776 89999999999999966 9999999999874 2223
Q ss_pred ecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee-cCCCEEEEEEccCCCC
Q 023672 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG-QEGGVTHVSKLSSAYT 279 (279)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~v~~~~~spdg~~ 279 (279)
.+ ..|...|.+++|+| ++.+|++++.||.|++||+++++.+..+.. +..++..++|+|+|++
T Consensus 144 ~~----~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 206 (312)
T 4ery_A 144 TL----PAHSDPVSAVHFNR-DGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKY 206 (312)
T ss_dssp EE----CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSE
T ss_pred Ee----cCCCCcEEEEEEcC-CCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCE
Confidence 33 57888999999999 899999999999999999999998877654 5668999999999864
No 22
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=3.4e-32 Score=218.89 Aligned_cols=210 Identities=18% Similarity=0.329 Sum_probs=164.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.+++... .+.+|.+.|.+++|+|++++|++|+.|++|++||+.++... .
T Consensus 146 ~i~iwd~~~~~~~~------~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~------------------~ 201 (393)
T 1erj_A 146 LIRIWDIENRKIVM------ILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS------------------L 201 (393)
T ss_dssp CEEEEETTTTEEEE------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE------------------E
T ss_pred eEEEEECCCCcEEE------EEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE------------------E
Confidence 57788988776554 67899999999999999999999999999999999876431 1
Q ss_pred eecCCCceEEEEeeCcccccCC-CCcEEEEecCCCcEEEEECCCCeeeEEEeccCc--cccccceeeEEECCCCCEEEEe
Q 023672 115 VVTEGESVYDFCWFPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA--VDEITAAFSVAFNPTGTKIFAG 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~--~~~~~~v~~~~~~~~~~~l~~~ 191 (279)
...+...+..++| +| ++.+|++|+.|+.|++||+++++.+..+..... .++...|.+++|+|++++|+++
T Consensus 202 ~~~~~~~v~~~~~-------~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~ 274 (393)
T 1erj_A 202 TLSIEDGVTTVAV-------SPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSG 274 (393)
T ss_dssp EEECSSCEEEEEE-------CSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEE
T ss_pred EEEcCCCcEEEEE-------ECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEE
Confidence 2234456777777 55 788999999999999999999988776632111 1223389999999999999976
Q ss_pred -cCCeEEEEEccCCCCceee----eeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCC
Q 023672 192 -YNKSVRVFDVHRPGRDFEK----YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG 266 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~----~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 266 (279)
.|+.|++||++........ .......+.+|...|.+++|+| ++.+|++|+.|+.|++||+++++++..+.+|..
T Consensus 275 s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~ 353 (393)
T 1erj_A 275 SLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQ-NDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRN 353 (393)
T ss_dssp ETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECG-GGCEEEEEETTSEEEEEETTTCCEEEEEECCSS
T ss_pred eCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECC-CCCEEEEEeCCCeEEEEECCCCeEEEEECCCCC
Confidence 9999999999863211100 0011112258899999999999 899999999999999999999999999999999
Q ss_pred CEEEEEEccC
Q 023672 267 GVTHVSKLSS 276 (279)
Q Consensus 267 ~v~~~~~spd 276 (279)
.|.+++|+|+
T Consensus 354 ~v~~v~~~~~ 363 (393)
T 1erj_A 354 SVISVAVANG 363 (393)
T ss_dssp CEEEEEECSS
T ss_pred CEEEEEecCC
Confidence 9999999874
No 23
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=4.1e-32 Score=210.39 Aligned_cols=212 Identities=18% Similarity=0.217 Sum_probs=159.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEcc--CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+++||+..... .....+.+|.+.|++++|+| ++++|++|+.|++|+|||+.++.... .
T Consensus 32 ~v~iw~~~~~~~----~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~---------------~ 92 (297)
T 2pm7_B 32 TIKIFEVEGETH----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQ---------------I 92 (297)
T ss_dssp CEEEEEBCSSCB----CCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCC---------------C
T ss_pred EEEEEecCCCCc----EEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEE---------------E
Confidence 577888764321 11236789999999999986 48999999999999999998653210 0
Q ss_pred eeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCee--eEEEeccCccccccceeeEEECCC------
Q 023672 113 SLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNPT------ 184 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~------ 184 (279)
.....|...|.+++|+|. .++.+|++++.|+.|++||++++.. ...+..|.. .|.+++|+|+
T Consensus 93 ~~~~~h~~~v~~v~~~p~-----~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~~~~ 162 (297)
T 2pm7_B 93 AVHAVHSASVNSVQWAPH-----EYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-----GVNSASWAPATIEEDG 162 (297)
T ss_dssp EEECCCSSCEEEEEECCG-----GGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSS-----CEEEEEECCCC-----
T ss_pred EEeecCCCceeEEEeCcC-----CCCcEEEEEECCCcEEEEEecCCCceeeeeeecccC-----ccceEeecCCcccccc
Confidence 122346678999988442 1278999999999999999987632 344555554 8999999997
Q ss_pred -------CCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCC--CcEEEEEeCCCcEEEEecCC
Q 023672 185 -------GTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH--TGMLAIGSYSQTSAIYREDN 254 (279)
Q Consensus 185 -------~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~~l~~~~~dg~i~~wd~~~ 254 (279)
+++|+++ .|+.|++||++++.........+ .+|...|.+++|+|+. +.+|++++.|++|+|||+++
T Consensus 163 ~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l----~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~ 238 (297)
T 2pm7_B 163 EHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL----EGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDN 238 (297)
T ss_dssp -------CCEEEEEETTSCEEEEEEETTTTEEEEEEEE----CCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESS
T ss_pred cCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEe----cCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCC
Confidence 4678865 99999999998743333333344 6899999999999932 58999999999999999987
Q ss_pred Ce---EEEEE--eecCCCEEEEEEccCCCC
Q 023672 255 ME---LLYVL--HGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 255 ~~---~~~~~--~~~~~~v~~~~~spdg~~ 279 (279)
.. ....+ ..|...|.+++|+|+|++
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 268 (297)
T 2pm7_B 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNV 268 (297)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCC
T ss_pred CCCccceeeeecccCCCcEEEEEECCCCCE
Confidence 43 12233 457889999999999974
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.6e-33 Score=224.43 Aligned_cols=226 Identities=19% Similarity=0.296 Sum_probs=164.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccc--------------ccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYD--------------VNA 100 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~--------------~~~ 100 (279)
.+++||..++.... .+.+|...|.+++|+|++++|++|+.|+.|++|++.+...... ...
T Consensus 89 ~v~iWd~~~~~~~~------~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~ 162 (380)
T 3iz6_a 89 RLIVWNALTSQKTH------AIKLHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASS 162 (380)
T ss_dssp EEEEEETTTTEEEE------EEECCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCC
T ss_pred eEEEEECCCCccce------EEecCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEE
Confidence 45677777666544 6778999999999999999999999999999999875321000 000
Q ss_pred ccc---------cCCCCcccceee---------------ecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECC
Q 023672 101 CSL---------AKDQDSYEASLV---------------VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDAT 156 (279)
Q Consensus 101 ~~~---------~~~~~~~~~~~~---------------~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~ 156 (279)
+.. ....+..+.... ..|...|.++.|+ ++++.+|++|+.|++|++||++
T Consensus 163 ~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~------~~~~~~l~sgs~D~~v~~wd~~ 236 (380)
T 3iz6_a 163 CQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN------SLNANMFISGSCDTTVRLWDLR 236 (380)
T ss_dssp CBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC------SSSCCEEEEEETTSCEEEEETT
T ss_pred EEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee------cCCCCEEEEEECCCeEEEEECC
Confidence 000 001111111111 2234456666553 2378899999999999999998
Q ss_pred -CCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCC
Q 023672 157 -TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH 234 (279)
Q Consensus 157 -~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 234 (279)
.++.+..+..|.. .|.+++|+|++++|+++ .|+.|++||++++ .....+.........+...|.+++|+| +
T Consensus 237 ~~~~~~~~~~~h~~-----~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s~-~ 309 (380)
T 3iz6_a 237 ITSRAVRTYHGHEG-----DINSVKFFPDGQRFGTGSDDGTCRLFDMRTG-HQLQVYNREPDRNDNELPIVTSVAFSI-S 309 (380)
T ss_dssp TTCCCCEEECCCSS-----CCCEEEECTTSSEEEEECSSSCEEEEETTTT-EEEEEECCCCSSSCCSSCSCSEEEECS-S
T ss_pred CCCcceEEECCcCC-----CeEEEEEecCCCeEEEEcCCCeEEEEECCCC-cEEEEecccccccccccCceEEEEECC-C
Confidence 4567777877776 89999999999999976 9999999999984 222222111111123344689999999 9
Q ss_pred CcEEEEEeCCCcEEEEecCCCeEEEEE----eecCCCEEEEEEccCCCC
Q 023672 235 TGMLAIGSYSQTSAIYREDNMELLYVL----HGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 235 ~~~l~~~~~dg~i~~wd~~~~~~~~~~----~~~~~~v~~~~~spdg~~ 279 (279)
+.+|++|+.||.|++||+.+++.+..+ .+|.+.|++++|+|||++
T Consensus 310 g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 358 (380)
T 3iz6_a 310 GRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSA 358 (380)
T ss_dssp SSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSE
T ss_pred CCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCE
Confidence 999999999999999999999988877 679999999999999974
No 25
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=1.3e-32 Score=218.40 Aligned_cols=205 Identities=13% Similarity=0.181 Sum_probs=154.4
Q ss_pred cCCCCCceEEEEEccCCCeEEEeeC------CCeEEEEeCCCCcccccccc-----------c-------cccCCCCccc
Q 023672 56 SSIPNNFLKGIKWSPDGSSFLTSSE------DKTLRIFSLPENGISYDVNA-----------C-------SLAKDQDSYE 111 (279)
Q Consensus 56 ~~~h~~~v~~~~~~~~~~~l~t~~~------dg~i~iwd~~~~~~~~~~~~-----------~-------~~~~~~~~~~ 111 (279)
+.+|.+.|++++|+|||++|++|+. |+.|++|+..++........ . .+....++.+
T Consensus 38 p~~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v 117 (357)
T 4g56_B 38 PACMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAV 117 (357)
T ss_dssp --CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCE
T ss_pred cccccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEE
Confidence 4569999999999999999999997 78899999876543111100 0 0000111111
Q ss_pred c--------------eeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCcccccccee
Q 023672 112 A--------------SLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAF 177 (279)
Q Consensus 112 ~--------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~ 177 (279)
. .....|...|.+++| +|++++|++|+.|+.|++||+++++.+..+..|.. .|.
T Consensus 118 ~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~-------spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~-----~v~ 185 (357)
T 4g56_B 118 ELWEILEKESLLVNKFAKYEHDDIVKTLSV-------FSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS-----EVN 185 (357)
T ss_dssp EEC--------CCCCEEECCCSSCEEEEEE-------CSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-----CEE
T ss_pred EEeeccccceeEEEeeccCCCCCCEEEEEE-------CCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC-----CEE
Confidence 1 011134445666655 88999999999999999999999999999988776 899
Q ss_pred eEEECCCCC-EEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCC
Q 023672 178 SVAFNPTGT-KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (279)
Q Consensus 178 ~~~~~~~~~-~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~ 255 (279)
+++|+|++. +++++ .|+.|++||++++ +..... ....+...+.+++|+|+++.+|++|+.|+.|++||++++
T Consensus 186 ~v~~s~~~~~~~~s~~~dg~v~~wd~~~~-~~~~~~-----~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~ 259 (357)
T 4g56_B 186 CVAACPGKDTIFLSCGEDGRILLWDTRKP-KPATRI-----DFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNP 259 (357)
T ss_dssp EEEECTTCSSCEEEEETTSCEEECCTTSS-SCBCBC-----CCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCG
T ss_pred EEEEccCCCceeeeeccCCceEEEECCCC-ceeeee-----eeccccccccchhhhhcccceEEEeecccceeEEECCCC
Confidence 999999875 55554 9999999999874 222211 114567789999999966789999999999999999999
Q ss_pred eEEEEEeecCCCEEEEEEccCCC
Q 023672 256 ELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 256 ~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
+++..+.+|...|++++|+|+|.
T Consensus 260 ~~~~~~~~~~~~v~~l~~sp~~~ 282 (357)
T 4g56_B 260 DSAQTSAVHSQNITGLAYSYHSS 282 (357)
T ss_dssp GGCEEECCCSSCEEEEEECSSSS
T ss_pred cEeEEEeccceeEEEEEEcCCCC
Confidence 99999999999999999999974
No 26
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=2.9e-32 Score=211.25 Aligned_cols=192 Identities=17% Similarity=0.263 Sum_probs=153.9
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|.+.|++++|+|+|++||+|+.|++|+|||+.+... . .......|..+|.+++|+|.
T Consensus 4 ~~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~--------------~-~~~~l~gH~~~V~~v~~s~~---- 64 (297)
T 2pm7_B 4 IANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETH--------------K-LIDTLTGHEGPVWRVDWAHP---- 64 (297)
T ss_dssp ECCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCB--------------C-CCEEECCCSSCEEEEEECCG----
T ss_pred eccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCc--------------E-EEEEEccccCCeEEEEecCC----
Confidence 5778999999999999999999999999999999974311 0 01133467789999988431
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCe--eeEEEeccCccccccceeeEEECCC--CCEEEEe-cCCeEEEEEccCCCCcee
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRDFE 209 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~-~d~~i~~~d~~~~~~~~~ 209 (279)
.++.+|++|+.|++|++||+++++ .+..+..|.. .|.+++|+|+ +.+|+++ .|+.|++||++.+... .
T Consensus 65 -~~g~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~-~ 137 (297)
T 2pm7_B 65 -KFGTILASCSYDGKVMIWKEENGRWSQIAVHAVHSA-----SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTT-S 137 (297)
T ss_dssp -GGCSEEEEEETTTEEEEEEBSSSCBCCCEEECCCSS-----CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCB-C
T ss_pred -CcCCEEEEEcCCCEEEEEEcCCCceEEEEEeecCCC-----ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCce-e
Confidence 147899999999999999999874 4455555554 8999999997 7888865 9999999999874211 1
Q ss_pred eeeecccccCCCCCceEEEEEccCC------------CcEEEEEeCCCcEEEEecCCCe----EEEEEeecCCCEEEEEE
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPTH------------TGMLAIGSYSQTSAIYREDNME----LLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~~------------~~~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~v~~~~~ 273 (279)
...+ .+|...|.+++|+|+. +.+|++|+.|++|++||+++++ ++..+.+|...|.+++|
T Consensus 138 -~~~~----~~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~ 212 (297)
T 2pm7_B 138 -PIII----DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (297)
T ss_dssp -CEEE----ECCSSCEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred -eeee----ecccCccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEE
Confidence 1122 5888999999999931 5699999999999999998765 66788999999999999
Q ss_pred ccCC
Q 023672 274 LSSA 277 (279)
Q Consensus 274 spdg 277 (279)
+|++
T Consensus 213 sp~~ 216 (297)
T 2pm7_B 213 SPTV 216 (297)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9985
No 27
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=6.6e-32 Score=217.22 Aligned_cols=213 Identities=20% Similarity=0.320 Sum_probs=161.6
Q ss_pred eeeEecCCCCcccceeeeee------------ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCcccccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFR------------TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACS 102 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~------------~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~ 102 (279)
.+.+|++.++.....+.... ....+...|.+++|+|++++|++|+.|++|+|||+.+++...
T Consensus 86 ~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~------ 159 (393)
T 1erj_A 86 TTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVM------ 159 (393)
T ss_dssp CEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE------
T ss_pred cEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEE------
Confidence 45677877766544221110 011233459999999999999999999999999998654311
Q ss_pred ccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEEC
Q 023672 103 LAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFN 182 (279)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 182 (279)
....|...|.+++| +|++.+|++++.|++|++||+++++....+.... .+.+++|+
T Consensus 160 -----------~~~~h~~~v~~~~~-------~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~------~v~~~~~~ 215 (393)
T 1erj_A 160 -----------ILQGHEQDIYSLDY-------FPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED------GVTTVAVS 215 (393)
T ss_dssp -----------EECCCSSCEEEEEE-------CTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS------CEEEEEEC
T ss_pred -----------EEccCCCCEEEEEE-------cCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC------CcEEEEEE
Confidence 23456778999987 6789999999999999999999999887776544 78899999
Q ss_pred C-CCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCC-----
Q 023672 183 P-TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM----- 255 (279)
Q Consensus 183 ~-~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~----- 255 (279)
| ++++++++ .|+.|++||++++ .....+........+|...|.+++|+| ++.+|++|+.|+.|++||+++.
T Consensus 216 ~~~~~~l~~~s~d~~v~iwd~~~~-~~~~~~~~~~~~~~~h~~~v~~v~~~~-~g~~l~s~s~d~~v~~wd~~~~~~~~~ 293 (393)
T 1erj_A 216 PGDGKYIAAGSLDRAVRVWDSETG-FLVERLDSENESGTGHKDSVYSVVFTR-DGQSVVSGSLDRSVKLWNLQNANNKSD 293 (393)
T ss_dssp STTCCEEEEEETTSCEEEEETTTC-CEEEEEC------CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEEC--------
T ss_pred CCCCCEEEEEcCCCcEEEEECCCC-cEEEeecccccCCCCCCCCEEEEEECC-CCCEEEEEeCCCEEEEEECCCCCCccc
Confidence 9 88999866 9999999999873 322222111122257899999999999 8999999999999999999753
Q ss_pred -------eEEEEEeecCCCEEEEEEccCCCC
Q 023672 256 -------ELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 256 -------~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.+...+.+|...|.+++|+|+|++
T Consensus 294 ~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 324 (393)
T 1erj_A 294 SKTPNSGTCEVTYIGHKDFVLSVATTQNDEY 324 (393)
T ss_dssp -------CEEEEEECCSSCEEEEEECGGGCE
T ss_pred ccCCCCCcceEEEecccCcEEEEEECCCCCE
Confidence 356678899999999999999864
No 28
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=7.1e-32 Score=213.38 Aligned_cols=207 Identities=17% Similarity=0.282 Sum_probs=161.6
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+....... ......+|.+.|.+++|+|++++|++|+.|++|+|||+..+.... ...
T Consensus 39 ~i~iw~~~~~~~~~---~~~~~~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~---------------~~~ 100 (345)
T 3fm0_A 39 RIRIWGTEGDSWIC---KSVLSEGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFEC---------------VTT 100 (345)
T ss_dssp CEEEEEEETTEEEE---EEEECSSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEE---------------EEE
T ss_pred eEEEEEcCCCccee---eeeeccccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEE---------------EEE
Confidence 56778776654321 112457899999999999999999999999999999987542110 012
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCe---eeEEEeccCccccccceeeEEECCCCCEEEEe
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL---LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 191 (279)
...|...|.+++| +|++++|++|+.|++|++||++++. .+..+..+.. .|.+++|+|++.+|+++
T Consensus 101 ~~~h~~~v~~v~~-------sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~-----~v~~~~~~p~~~~l~s~ 168 (345)
T 3fm0_A 101 LEGHENEVKSVAW-------APSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQ-----DVKHVVWHPSQELLASA 168 (345)
T ss_dssp ECCCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCS-----CEEEEEECSSSSCEEEE
T ss_pred ccCCCCCceEEEE-------eCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCC-----CeEEEEECCCCCEEEEE
Confidence 3456778999988 7789999999999999999998764 3445555554 89999999999999966
Q ss_pred -cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCC---------------C
Q 023672 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN---------------M 255 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~---------------~ 255 (279)
.|+.|++||++.+. ......+ .+|...|.+++|+| ++.+|++|+.|++|++||... .
T Consensus 169 s~d~~i~~w~~~~~~--~~~~~~~----~~h~~~v~~l~~sp-~g~~l~s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~ 241 (345)
T 3fm0_A 169 SYDDTVKLYREEEDD--WVCCATL----EGHESTVWSLAFDP-SGQRLASCSDDRTVRIWRQYLPGNEQGVACSGSDPSW 241 (345)
T ss_dssp ETTSCEEEEEEETTE--EEEEEEE----CCCSSCEEEEEECT-TSSEEEEEETTSCEEEEEEECTTCTTCCCCC---CEE
T ss_pred eCCCcEEEEEecCCC--EEEEEEe----cCCCCceEEEEECC-CCCEEEEEeCCCeEEEeccccCCCCccceeeccCCcc
Confidence 99999999998631 1222233 68999999999999 899999999999999999632 2
Q ss_pred eEEEEEee-cCCCEEEEEEccCCC
Q 023672 256 ELLYVLHG-QEGGVTHVSKLSSAY 278 (279)
Q Consensus 256 ~~~~~~~~-~~~~v~~~~~spdg~ 278 (279)
+++..+.+ |...|.+++|+|++.
T Consensus 242 ~~~~~~~~~h~~~v~~v~~~~~~~ 265 (345)
T 3fm0_A 242 KCICTLSGFHSRTIYDIAWCQLTG 265 (345)
T ss_dssp EEEEEECSSCSSCEEEEEECTTTC
T ss_pred ceeEEecCCCCCcEEEEEEecCCC
Confidence 34556665 888999999999875
No 29
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=100.00 E-value=3.8e-33 Score=223.20 Aligned_cols=213 Identities=15% Similarity=0.207 Sum_probs=159.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.++.. .....+.+|.+.|.+++|+|++++|++++.|++|++||+.++.... ....
T Consensus 34 ~i~iw~~~~~~~----~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~--------------~~~~ 95 (377)
T 3dwl_C 34 QVELYEQDGNGW----KHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWK--------------QTLV 95 (377)
T ss_dssp CBCEEEEETTEE----EECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCC--------------CEEE
T ss_pred EEEEEEccCCce----EEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCcee--------------eeeE
Confidence 567788776521 1223678999999999999999999999999999999998754100 0012
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCe---eeEEEec-cCccccccceeeEEECCCCCEEEE
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL---LRCTYRA-YDAVDEITAAFSVAFNPTGTKIFA 190 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~---~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~ 190 (279)
...+...|.+++| +|++.+|++++.|+.|++||+++++ ....+.. +.. .|.+++|+|+++++++
T Consensus 96 ~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~~ 163 (377)
T 3dwl_C 96 LLRLNRAATFVRW-------SPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRS-----TILSLDWHPNNVLLAA 163 (377)
T ss_dssp CCCCSSCEEEEEC-------CTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCS-----CEEEEEECTTSSEEEE
T ss_pred ecccCCceEEEEE-------CCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCC-----CeEEEEEcCCCCEEEE
Confidence 3346678998877 7789999999999999999999886 3566665 544 8999999999999996
Q ss_pred e-cCCeEEEEEccCCCCcee----------eeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeE--
Q 023672 191 G-YNKSVRVFDVHRPGRDFE----------KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL-- 257 (279)
Q Consensus 191 ~-~d~~i~~~d~~~~~~~~~----------~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~-- 257 (279)
+ .|+.|++||++....... ........+ +|...|.+++|+| ++.+|++++.||.|++||+++++.
T Consensus 164 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp-~~~~l~~~~~d~~i~iwd~~~~~~~~ 241 (377)
T 3dwl_C 164 GCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSP-SGNALAYAGHDSSVTIAYPSAPEQPP 241 (377)
T ss_dssp EESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECT-TSSCEEEEETTTEEC-CEECSTTSCE
T ss_pred EeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEECC-CCCEEEEEeCCCcEEEEECCCCCCcc
Confidence 6 999999999964211000 011222233 8889999999999 899999999999999999999987
Q ss_pred --EEEEeecCCCEEEEEEccCCCC
Q 023672 258 --LYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 258 --~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+..+.+|..+|.+++|+|||++
T Consensus 242 ~~~~~~~~~~~~v~~~~~s~~~~~ 265 (377)
T 3dwl_C 242 RALITVKLSQLPLRSLLWANESAI 265 (377)
T ss_dssp EECCCEECSSSCEEEEEEEETTEE
T ss_pred eeeEeecCCCCceEEEEEcCCCCE
Confidence 7889999999999999999863
No 30
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=1.1e-31 Score=210.96 Aligned_cols=213 Identities=15% Similarity=0.214 Sum_probs=156.6
Q ss_pred eeeeeEecCCCCcccceeeeeecc-C-CCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcc
Q 023672 33 TWPLIRFDVPPHRTYHFYNQFRTS-S-IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSY 110 (279)
Q Consensus 33 ~~~~~~~d~~~~~~~~~~~~~~~~-~-~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 110 (279)
.-.+++||+..+... ....+ . +|.+.|.+++|+|++++|++|+.|++|+|||+......... ..
T Consensus 33 D~~i~lw~~~~~~~~----~~~~~~~~~h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~----------~~ 98 (330)
T 2hes_X 33 DRKIKLVSVKYDDFT----LIDVLDETAHKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFE----------MD 98 (330)
T ss_dssp SSCEEEEECSSSCCE----EEEEECTTCCCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CC----------CE
T ss_pred CCEEEEEEecCCCeE----EEEEEecCCccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCcccc----------ce
Confidence 336778888764321 11122 3 49999999999999999999999999999998643210000 00
Q ss_pred cceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCC----eeeEEEeccCccccccceeeEEECCCCC
Q 023672 111 EASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG----LLRCTYRAYDAVDEITAAFSVAFNPTGT 186 (279)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~----~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 186 (279)
.......|...|.+++| +|++++|++|+.|++|++||++.. +.+..+..|.. .|.+++|+|++.
T Consensus 99 ~~~~~~~h~~~V~~v~~-------sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~ 166 (330)
T 2hes_X 99 LLAIIEGHENEVKGVAW-------SNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ-----DVKHVIWHPSEA 166 (330)
T ss_dssp EEEEEC----CEEEEEE-------CTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS-----CEEEEEECSSSS
T ss_pred eEEEEcCCCCcEEEEEE-------CCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC-----ceEEEEECCCCC
Confidence 01123457778999987 778999999999999999999532 45566766665 899999999999
Q ss_pred EEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCC--CcEEEEEeCCCcEEEEecCCC--------
Q 023672 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH--TGMLAIGSYSQTSAIYREDNM-------- 255 (279)
Q Consensus 187 ~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~~l~~~~~dg~i~~wd~~~~-------- 255 (279)
+|+++ .|+.|++||...+ .......+ .+|...|.+++|+| + +.+|++|+.|++|++||++++
T Consensus 167 ~l~s~s~D~~i~iW~~~~~--~~~~~~~~----~~h~~~v~~~~~~~-~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~ 239 (330)
T 2hes_X 167 LLASSSYDDTVRIWKDYDD--DWECVAVL----NGHEGTVWSSDFDK-TEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEW 239 (330)
T ss_dssp EEEEEETTSCEEEEEEETT--EEEEEEEE----CCCSSCEEEEEECC-SSSSCEEEEEETTSCEEEEEEEEECTTSCEEE
T ss_pred EEEEEcCCCeEEEEECCCC--CeeEEEEc----cCCCCcEEEEEecC-CCCeeEEEEEeCCCeEEEEEecCCCcccccee
Confidence 99966 9999999999763 12233334 68999999999999 6 668999999999999999765
Q ss_pred eEEEEEee-cCCCEEEEEEccCCC
Q 023672 256 ELLYVLHG-QEGGVTHVSKLSSAY 278 (279)
Q Consensus 256 ~~~~~~~~-~~~~v~~~~~spdg~ 278 (279)
.+...+.. |...|.+++|+|++.
T Consensus 240 ~~~~~~~~~h~~~v~~v~~s~~~~ 263 (330)
T 2hes_X 240 VCEAILPDVHKRQVYNVAWGFNGL 263 (330)
T ss_dssp EEEEECCSCCSSCEEEEEECTTSC
T ss_pred EEeeecccccccceEEEEEcCCCE
Confidence 34555555 889999999998763
No 31
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=3.1e-31 Score=206.88 Aligned_cols=208 Identities=20% Similarity=0.248 Sum_probs=157.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+|+..+++... .+.+|...|.+++|+|++++|++|+.|+.|++||+.++.... .
T Consensus 46 ~i~iw~~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~-----------------~ 102 (312)
T 4ery_A 46 LIKIWGAYDGKFEK------TISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLK-----------------T 102 (312)
T ss_dssp CEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-----------------E
T ss_pred eEEEEeCCCcccch------hhccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEE-----------------E
Confidence 56788887766544 677899999999999999999999999999999998754321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...+...|.++.| +|++.+|++++.|+.|++||+++++.+..+..+.. .|.+++|+|++++++++ .|
T Consensus 103 ~~~~~~~v~~~~~-------~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d 170 (312)
T 4ery_A 103 LKGHSNYVFCCNF-------NPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD-----PVSAVHFNRDGSLIVSSSYD 170 (312)
T ss_dssp EECCSSCEEEEEE-------CSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS-----CEEEEEECTTSSEEEEEETT
T ss_pred EcCCCCCEEEEEE-------cCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC-----cEEEEEEcCCCCEEEEEeCC
Confidence 2346678888877 67889999999999999999999999888887765 89999999999999966 99
Q ss_pred CeEEEEEccCCCCceeeeee------------------------------------cccccCCCCCce--EEEEEccCCC
Q 023672 194 KSVRVFDVHRPGRDFEKYST------------------------------------LKGNKEGQAGIM--SAIAFSPTHT 235 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~------------------------------------~~~~~~~~~~~v--~~~~~sp~~~ 235 (279)
+.|++||++++. ....... ....+.+|.... ....+++.++
T Consensus 171 ~~i~~wd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 171 GLCRIWDTASGQ-CLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp SCEEEEETTTCC-EEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred CcEEEEECCCCc-eeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 999999998732 1111000 000011222211 1123332256
Q ss_pred cEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 236 GMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 236 ~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
.+|++|+.||.|++||+.+++++..+.+|...|.+++|+|+++
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~~ 292 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTEN 292 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSSS
T ss_pred cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcCC
Confidence 6777888888888888888888888899999999999999875
No 32
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=3.1e-31 Score=209.58 Aligned_cols=207 Identities=14% Similarity=0.200 Sum_probs=157.8
Q ss_pred eeeEecCCCCcccc-eeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYH-FYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+++||+....... .......+.+|.+.|.+++|+|++.+|++|+.|++|++||+.++....
T Consensus 50 ~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~----------------- 112 (343)
T 2xzm_R 50 TVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYK----------------- 112 (343)
T ss_dssp CEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEE-----------------
T ss_pred EEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEE-----------------
Confidence 57788876544321 112344688999999999999999999999999999999998764321
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCC--------
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG-------- 185 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-------- 185 (279)
....|...|.+++| +|++++|++++.|++|++||+.... ..... ....+...|.+++|+|++
T Consensus 113 ~~~~h~~~v~~v~~-------sp~~~~l~s~~~d~~i~~wd~~~~~-~~~~~--~~~~~~~~v~~~~~~~~~~~~~~~~~ 182 (343)
T 2xzm_R 113 RFVGHQSEVYSVAF-------SPDNRQILSAGAEREIKLWNILGEC-KFSSA--EKENHSDWVSCVRYSPIMKSANKVQP 182 (343)
T ss_dssp EEECCCSCEEEEEE-------CSSTTEEEEEETTSCEEEEESSSCE-EEECC--TTTSCSSCEEEEEECCCCCSCSCCCS
T ss_pred EEcCCCCcEEEEEE-------CCCCCEEEEEcCCCEEEEEeccCCc-eeeee--cccCCCceeeeeeeccccccccccCC
Confidence 23457778999987 7789999999999999999998433 22222 111222379999999987
Q ss_pred --CEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCC-CeEEEEE
Q 023672 186 --TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVL 261 (279)
Q Consensus 186 --~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~ 261 (279)
.+++++ .|+.|++||... .....+ .+|...|.+++|+| ++.+|++|+.||.|++||+++ ..+...+
T Consensus 183 ~~~~l~s~~~d~~i~iwd~~~-----~~~~~~----~~h~~~v~~~~~s~-~g~~l~sgs~dg~v~iwd~~~~~~~~~~~ 252 (343)
T 2xzm_R 183 FAPYFASVGWDGRLKVWNTNF-----QIRYTF----KAHESNVNHLSISP-NGKYIATGGKDKKLLIWDILNLTYPQREF 252 (343)
T ss_dssp SCCEEEEEETTSEEEEEETTT-----EEEEEE----ECCSSCEEEEEECT-TSSEEEEEETTCEEEEEESSCCSSCSEEE
T ss_pred CCCEEEEEcCCCEEEEEcCCC-----ceeEEE----cCccccceEEEECC-CCCEEEEEcCCCeEEEEECCCCcccceee
Confidence 577755 999999999543 222333 68889999999999 999999999999999999954 4444444
Q ss_pred eecCCCEEEEEEccCCCC
Q 023672 262 HGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 262 ~~~~~~v~~~~~spdg~~ 279 (279)
. +...|.+++|+|++++
T Consensus 253 ~-~~~~v~~v~~sp~~~~ 269 (343)
T 2xzm_R 253 D-AGSTINQIAFNPKLQW 269 (343)
T ss_dssp E-CSSCEEEEEECSSSCE
T ss_pred c-CCCcEEEEEECCCCCE
Confidence 3 5567999999999863
No 33
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.7e-32 Score=214.30 Aligned_cols=192 Identities=16% Similarity=0.251 Sum_probs=149.3
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|.+.|++++|+|+|++|++|+.|++|+|||+.++... .......|...|.+++|+|.
T Consensus 8 ~~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~---------------~~~~l~gH~~~V~~v~~~~~---- 68 (316)
T 3bg1_A 8 VDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI---------------LIADLRGHEGPVWQVAWAHP---- 68 (316)
T ss_dssp ------CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEE---------------EEEEEECCSSCEEEEEECCG----
T ss_pred ecccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcE---------------EEEEEcCCCccEEEEEeCCC----
Confidence 56789999999999999999999999999999999764210 00123467789999988431
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCe--eeEEEeccCccccccceeeEEECCC--CCEEEEe-cCCeEEEEEccCCCCcee
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRDFE 209 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~-~d~~i~~~d~~~~~~~~~ 209 (279)
.++.+|++|+.|++|++||+++++ ....+..|.. .|.+++|+|+ +.+|+++ .|+.|++||++.. ....
T Consensus 69 -~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~-----~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~-~~~~ 141 (316)
T 3bg1_A 69 -MYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDS-----SVNSVCWAPHDYGLILACGSSDGAISLLTYTGE-GQWE 141 (316)
T ss_dssp -GGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSS-----CCCEEEECCTTTCSCEEEECSSSCEEEEEECSS-SCEE
T ss_pred -CCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCC-----ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCC-CCcc
Confidence 147899999999999999999874 4455555654 8999999998 7788866 9999999999863 2121
Q ss_pred eeeecccccCCCCCceEEEEEccCC-----------------CcEEEEEeCCCcEEEEecCCC---eEEEEEeecCCCEE
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPTH-----------------TGMLAIGSYSQTSAIYREDNM---ELLYVLHGQEGGVT 269 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~~-----------------~~~l~~~~~dg~i~~wd~~~~---~~~~~~~~~~~~v~ 269 (279)
.. ....+|...|.+++|+| + +.+|++|+.|+.|++||++.. +++..+.+|..+|+
T Consensus 142 ~~----~~~~~h~~~v~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~ 216 (316)
T 3bg1_A 142 VK----KINNAHTIGCNAVSWAP-AVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHSDWVR 216 (316)
T ss_dssp EC----CBTTSSSSCBCCCEECC-CCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCBCCSSCEE
T ss_pred ee----eeeccccCCcceEEEcc-ccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecccCCCceE
Confidence 11 22368889999999999 5 468999999999999999765 46778889999999
Q ss_pred EEEEccCC
Q 023672 270 HVSKLSSA 277 (279)
Q Consensus 270 ~~~~spdg 277 (279)
+++|+|++
T Consensus 217 ~v~~sp~~ 224 (316)
T 3bg1_A 217 DVAWAPSI 224 (316)
T ss_dssp EEECCCCS
T ss_pred EEEecCCC
Confidence 99999986
No 34
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=3.1e-31 Score=211.12 Aligned_cols=190 Identities=12% Similarity=0.153 Sum_probs=146.9
Q ss_pred cCCCCCceEEEEEccCCCeEEE--eeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 56 SSIPNNFLKGIKWSPDGSSFLT--SSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 56 ~~~h~~~v~~~~~~~~~~~l~t--~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
...+...+.+++|+|||++|++ ++.|++|+|||+.++... ....+...|.+++|
T Consensus 129 ~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~------------------~~~~~~~~V~~v~f------ 184 (365)
T 4h5i_A 129 STNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEK------------------FEIETRGEVKDLHF------ 184 (365)
T ss_dssp CCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEE------------------EEEECSSCCCEEEE------
T ss_pred cCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEE------------------EEeCCCCceEEEEE------
Confidence 3456677999999999998764 557999999999876432 22345667888877
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCC----eEEEEEccCCCCce
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK----SVRVFDVHRPGRDF 208 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~----~i~~~d~~~~~~~~ 208 (279)
+|+++++++++.+ .+.+|+..+++.+....... +...|.+++|+|++..++++ .|+ .+++||+.......
T Consensus 185 -spdg~~l~s~s~~-~~~~~~~~~~~~~~~~~~~~---~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~ 259 (365)
T 4h5i_A 185 -STDGKVVAYITGS-SLEVISTVTGSCIARKTDFD---KNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSV 259 (365)
T ss_dssp -CTTSSEEEEECSS-CEEEEETTTCCEEEEECCCC---TTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEE
T ss_pred -ccCCceEEeccce-eEEEEEeccCcceeeeecCC---CCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecc
Confidence 7899999999855 56677777776554433221 11278999999999999854 665 68889987642222
Q ss_pred eeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEE-eecCCCEEEEEEccCCCC
Q 023672 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL-HGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~-~~~~~~v~~~~~spdg~~ 279 (279)
.....+ .+|...|++++|+| ++.+|++|+.|++|+|||+++++++..+ .+|..+|++++|||||++
T Consensus 260 ~~~~~~----~~~~~~V~~~~~Sp-dg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~ 326 (365)
T 4h5i_A 260 LRSKQV----TNRFKGITSMDVDM-KGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTY 326 (365)
T ss_dssp EEEEEE----ESSCSCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCE
T ss_pred eeeeee----cCCCCCeEeEEECC-CCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCCCE
Confidence 222223 68888999999999 9999999999999999999999999875 789999999999999974
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=4.8e-31 Score=222.26 Aligned_cols=183 Identities=26% Similarity=0.443 Sum_probs=156.6
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|...|.+++|+|++++|++++.|+.|++||.... .. .....+...|.+++|
T Consensus 380 ~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~~~~-~~-----------------~~~~~~~~~v~~~~~------- 434 (577)
T 2ymu_A 380 TLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNRNGQ-LL-----------------QTLTGHSSSVWGVAF------- 434 (577)
T ss_dssp EEECCSSCEEEEEECTTSSCEEEEETTSEEEEECTTCC-EE-----------------EEEECCSSCEEEEEE-------
T ss_pred EecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCC-EE-----------------EEecCCCCCeEEEEE-------
Confidence 57789999999999999999999999999999996532 10 123456678888876
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeee
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~ 213 (279)
+|++++|++++.|+.|++||+ +++.+..+..+.. .|.+++|+|++++|+++ .|+.|++||... +....
T Consensus 435 s~d~~~l~~~~~d~~v~~w~~-~~~~~~~~~~~~~-----~v~~~~~spd~~~las~~~d~~i~iw~~~~-----~~~~~ 503 (577)
T 2ymu_A 435 SPDDQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-----SVRGVAFSPDGQTIASASDDKTVKLWNRNG-----QLLQT 503 (577)
T ss_dssp CTTSSEEEEEETTSEEEEEET-TSCEEEEEECCSS-----CEEEEEECTTSCEEEEEETTSEEEEEETTS-----CEEEE
T ss_pred CCCCCEEEEEcCCCEEEEEEC-CCCEEEEEcCCCC-----CEEEEEEcCCCCEEEEEeCCCEEEEEcCCC-----CEEEE
Confidence 778999999999999999996 5667777777765 89999999999999966 999999999643 23334
Q ss_pred cccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+ .+|...|++++|+| ++.+|++++.||.|++||. +++++..+.+|.+.|++++|+|||++
T Consensus 504 ~----~~h~~~v~~l~~s~-dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~ 563 (577)
T 2ymu_A 504 L----TGHSSSVRGVAFSP-DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQT 563 (577)
T ss_dssp E----ECCSSCEEEEEECT-TSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSC
T ss_pred E----eCCCCCEEEEEEcC-CCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCE
Confidence 4 68899999999999 8999999999999999995 78899999999999999999999985
No 36
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=100.00 E-value=2.1e-32 Score=222.95 Aligned_cols=192 Identities=13% Similarity=0.122 Sum_probs=150.6
Q ss_pred ccCCCCCceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 55 TSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
...+|...|+||+|+| ++++||+|+.||+|+|||+.++.... ......|...|.+++|+|.
T Consensus 114 ~~~~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~---------------~~~~~gH~~~V~~l~f~p~--- 175 (435)
T 4e54_B 114 KAAPFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPT---------------FIKGIGAGGSITGLKFNPL--- 175 (435)
T ss_dssp EEEECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCE---------------EECCCSSSCCCCEEEECSS---
T ss_pred cCCCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCcee---------------EEEccCCCCCEEEEEEeCC---
Confidence 4567889999999999 56799999999999999998653211 0122357789999998543
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeee
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~ 212 (279)
++.+|++|+.|++|++||++++........+.. ...+.+++|+|++.+|++| .|+.|++||++. +...
T Consensus 176 ---~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-----~~~~ 244 (435)
T 4e54_B 176 ---NTNQFYASSMEGTTRLQDFKGNILRVFASSDTI---NIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-----KELW 244 (435)
T ss_dssp ---CTTEEEEECSSSCEEEEETTSCEEEEEECCSSC---SCCCCCEEEETTTTEEEEECSSSBEEEEESSS-----CBCC
T ss_pred ---CCCEEEEEeCCCEEEEeeccCCceeEEeccCCC---CccEEEEEECCCCCEEEEEeCCCcEeeeccCc-----ceeE
Confidence 678999999999999999987654433332221 1257889999999999977 999999999975 2222
Q ss_pred ecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEE---EEeecCCCEEEEEEccCCCC
Q 023672 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY---VLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~---~~~~~~~~v~~~~~spdg~~ 279 (279)
.+ .+|...|.+++|+|++..+|++|+.|+.|++||+++.+... ...+|..+|++++|+|||++
T Consensus 245 ~~----~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~ 310 (435)
T 4e54_B 245 NL----RMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGAR 310 (435)
T ss_dssp CS----BCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSE
T ss_pred EE----ecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCe
Confidence 33 68999999999999555689999999999999998876433 34578999999999999864
No 37
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=4.9e-31 Score=226.72 Aligned_cols=196 Identities=19% Similarity=0.311 Sum_probs=163.9
Q ss_pred eccCCCCCceEEEEEccCC-CeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccc
Q 023672 54 RTSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (279)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (279)
..+.+|.+.|++++|+|++ ++|+||+.|++|++|++.+..... .........|...|.+++|
T Consensus 376 ~~l~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~------------~~~~~~~~~h~~~v~~v~~----- 438 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAY------------GVAQRRLTGHSHFVEDVVL----- 438 (694)
T ss_dssp EEEECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCS------------CEEEEEEECCSSCEEEEEE-----
T ss_pred hhcccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCccc------------ccccceecCCCCcEEEEEE-----
Confidence 3678999999999999864 789999999999999998542210 0111234567788999987
Q ss_pred ccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeee
Q 023672 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~ 211 (279)
+|++++|++|+.|++|++||+.+++....+..|.. .|.+++|+|++++|+++ .|+.|++||+... ..
T Consensus 439 --s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~-----~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~-----~~ 506 (694)
T 3dm0_A 439 --SSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTK-----DVLSVAFSLDNRQIVSASRDRTIKLWNTLGE-----CK 506 (694)
T ss_dssp --CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSSCEEEEETTSCEEEECTTSC-----EE
T ss_pred --CCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCC-----CEEEEEEeCCCCEEEEEeCCCEEEEEECCCC-----cc
Confidence 77899999999999999999999999998888876 89999999999999966 9999999998752 22
Q ss_pred eecccccCCCCCceEEEEEccCCC--cEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 212 STLKGNKEGQAGIMSAIAFSPTHT--GMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~sp~~~--~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
..+.....+|...|.+++|+| ++ ..|++|+.|+.|++||++++++...+.+|.+.|++++|+|||++
T Consensus 507 ~~~~~~~~~h~~~v~~~~~~~-~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~ 575 (694)
T 3dm0_A 507 YTISEGGEGHRDWVSCVRFSP-NTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSL 575 (694)
T ss_dssp EEECSSTTSCSSCEEEEEECS-CSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSE
T ss_pred eeeccCCCCCCCcEEEEEEeC-CCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCE
Confidence 223333368899999999999 55 58999999999999999999999999999999999999999863
No 38
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=100.00 E-value=5.3e-31 Score=207.96 Aligned_cols=201 Identities=19% Similarity=0.315 Sum_probs=158.4
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|.+.|++++|+|++++|++|+.||.|++||+.++..... .......|...|.+++|+|.
T Consensus 6 ~~~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~-------------~~~~~~~~~~~v~~~~~~~~---- 68 (351)
T 3f3f_A 6 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWE-------------LSDSWRAHDSSIVAIDWASP---- 68 (351)
T ss_dssp EECCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEE-------------EEEEEECCSSCEEEEEECCG----
T ss_pred cCcccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcce-------------ecceeccCCCcEEEEEEcCC----
Confidence 5679999999999999999999999999999999986432100 01123457789999988431
Q ss_pred CCCCcEEEEecCCCcEEEEECCCC---------eeeEEEeccCccccccceeeEEECCC--CCEEEEe-cCCeEEEEEcc
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTG---------LLRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVH 202 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~---------~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~-~d~~i~~~d~~ 202 (279)
.++.+|++++.|+.|++||++++ +....+..+.. .|.+++|+|+ +.+++++ .|+.|++||++
T Consensus 69 -~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 142 (351)
T 3f3f_A 69 -EYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKG-----SLYSVKFAPAHLGLKLACLGNDGILRLYDAL 142 (351)
T ss_dssp -GGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred -CCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCC-----ceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence 15889999999999999999887 45666666655 8999999999 9988865 99999999998
Q ss_pred CCCCceeee----------------------------------------------------eecccccCCCCCceEEEEE
Q 023672 203 RPGRDFEKY----------------------------------------------------STLKGNKEGQAGIMSAIAF 230 (279)
Q Consensus 203 ~~~~~~~~~----------------------------------------------------~~~~~~~~~~~~~v~~~~~ 230 (279)
++....... ........+|...|.+++|
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~ 222 (351)
T 3f3f_A 143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISW 222 (351)
T ss_dssp STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEE
T ss_pred ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEE
Confidence 642110000 0002223578999999999
Q ss_pred ccCCC----cEEEEEeCCCcEEEEecCCC----------------------------------------------eEEEE
Q 023672 231 SPTHT----GMLAIGSYSQTSAIYREDNM----------------------------------------------ELLYV 260 (279)
Q Consensus 231 sp~~~----~~l~~~~~dg~i~~wd~~~~----------------------------------------------~~~~~ 260 (279)
+| ++ .+|++|+.||.|++||++++ +++..
T Consensus 223 ~p-~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (351)
T 3f3f_A 223 AP-SIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSE 301 (351)
T ss_dssp CC-CSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEE
T ss_pred CC-CCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEE
Confidence 99 76 89999999999999999875 66778
Q ss_pred EeecCCCEEEEEEccCCCC
Q 023672 261 LHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 261 ~~~~~~~v~~~~~spdg~~ 279 (279)
+.+|...|++++|+|+|++
T Consensus 302 ~~~h~~~v~~~~~s~~~~~ 320 (351)
T 3f3f_A 302 HDDHNGEVWSVSWNLTGTI 320 (351)
T ss_dssp ECTTSSCEEEEEECSSSCC
T ss_pred EecccccEEEEEEcCCCCE
Confidence 8889999999999999974
No 39
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=100.00 E-value=1.4e-31 Score=209.17 Aligned_cols=211 Identities=18% Similarity=0.213 Sum_probs=157.5
Q ss_pred eeeeEecCCCCcccceeeeeeccCCCCCceEEEEEcc--CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccc
Q 023672 34 WPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYE 111 (279)
Q Consensus 34 ~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 111 (279)
-.+++||+.++... ....+.+|.+.|.+++|+| ++++|++|+.|++|++||++++....
T Consensus 35 ~~v~lwd~~~~~~~----~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~--------------- 95 (316)
T 3bg1_A 35 RSVKIFDVRNGGQI----LIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK--------------- 95 (316)
T ss_dssp TEEEEEEEETTEEE----EEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE---------------
T ss_pred CeEEEEEecCCCcE----EEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE---------------
Confidence 36788888765321 1236779999999999986 48999999999999999998642110
Q ss_pred ceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeee---EEEeccCccccccceeeEEECCC----
Q 023672 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR---CTYRAYDAVDEITAAFSVAFNPT---- 184 (279)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~---- 184 (279)
......|...|.+++|+|. .++.+|++|+.|+.|++||++++... ..+..|. ..|.+++|+|+
T Consensus 96 ~~~~~~h~~~V~~v~~~p~-----~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~-----~~v~~~~~~~~~~~~ 165 (316)
T 3bg1_A 96 SHEHAGHDSSVNSVCWAPH-----DYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHT-----IGCNAVSWAPAVVPG 165 (316)
T ss_dssp EEEECCCSSCCCEEEECCT-----TTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSS-----SCBCCCEECCCCCC-
T ss_pred EEEccCCCCceEEEEECCC-----CCCcEEEEEcCCCCEEEEecCCCCCcceeeeecccc-----CCcceEEEccccCCc
Confidence 0122346678999988442 12789999999999999999876322 2223333 37889999997
Q ss_pred -------------CCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCC----cEEEEEeCCCc
Q 023672 185 -------------GTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT----GMLAIGSYSQT 246 (279)
Q Consensus 185 -------------~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~----~~l~~~~~dg~ 246 (279)
+++|+++ .|+.|++||++.. ........+ .+|...|.+++|+| ++ .+|++|+.|++
T Consensus 166 ~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~-~~~~~~~~l----~~h~~~V~~v~~sp-~~~~~~~~las~s~D~~ 239 (316)
T 3bg1_A 166 SLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEED-GQWKEEQKL----EAHSDWVRDVAWAP-SIGLPTSTIASCSQDGR 239 (316)
T ss_dssp -----CCSCCCCCCCBEECCBTTSBCCEEEECTT-SCEEEEECC----BCCSSCEEEEECCC-CSSCSCCEEEEEETTCE
T ss_pred cccccccccCccccceEEEecCCCeEEEEEeCCC-Cccceeeec----ccCCCceEEEEecC-CCCCCCceEEEEcCCCe
Confidence 3677865 9999999999752 222233333 68999999999999 54 78999999999
Q ss_pred EEEEecCCC---e-EEEEEeecCCCEEEEEEccCCCC
Q 023672 247 SAIYREDNM---E-LLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 247 i~~wd~~~~---~-~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
|++||+.+. . ....+..|...|.+++|+|+|++
T Consensus 240 v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~ 276 (316)
T 3bg1_A 240 VFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITANI 276 (316)
T ss_dssp EEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTTCC
T ss_pred EEEEEccCccccchhhhhhhcCCCcEEEEEEcCCCCE
Confidence 999999763 1 23456678999999999999974
No 40
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=100.00 E-value=1.2e-30 Score=207.59 Aligned_cols=197 Identities=15% Similarity=0.268 Sum_probs=158.1
Q ss_pred eeccCCCCCceEEEEEccC---CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeC
Q 023672 53 FRTSSIPNNFLKGIKWSPD---GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (279)
Q Consensus 53 ~~~~~~h~~~v~~~~~~~~---~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (279)
...+.+|.+.|++++|+|+ |++|++|+.||.|+|||+.+... ........|...|.+++|
T Consensus 32 ~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---------------~~~~~~~~h~~~v~~~~~-- 94 (368)
T 3mmy_A 32 IEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---------------TIPKAQQMHTGPVLDVCW-- 94 (368)
T ss_dssp EECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---------------EEEEEEEECSSCEEEEEE--
T ss_pred eEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---------------eeEEEeccccCCEEEEEE--
Confidence 3478899999999999998 69999999999999999986211 111234457788999988
Q ss_pred cccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEE--CCCCCEEEEe-cCCeEEEEEccCCCC
Q 023672 130 HMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF--NPTGTKIFAG-YNKSVRVFDVHRPGR 206 (279)
Q Consensus 130 ~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~-~d~~i~~~d~~~~~~ 206 (279)
+|++.+|++++.|+.|++||+++++..... .+.. .|.+++| +|++.+++++ .|+.|++||++++.
T Consensus 95 -----~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~-~~~~-----~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~- 162 (368)
T 3mmy_A 95 -----SDDGSKVFTASCDKTAKMWDLSSNQAIQIA-QHDA-----PVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN- 162 (368)
T ss_dssp -----CTTSSEEEEEETTSEEEEEETTTTEEEEEE-ECSS-----CEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS-
T ss_pred -----CcCCCEEEEEcCCCcEEEEEcCCCCceeec-cccC-----ceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc-
Confidence 778999999999999999999999876643 3444 8999999 8999988865 89999999998642
Q ss_pred ceeeee--------------------------------------------------------------------------
Q 023672 207 DFEKYS-------------------------------------------------------------------------- 212 (279)
Q Consensus 207 ~~~~~~-------------------------------------------------------------------------- 212 (279)
....+.
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i 242 (368)
T 3mmy_A 163 PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAI 242 (368)
T ss_dssp CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEE
T ss_pred EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEE
Confidence 111000
Q ss_pred ---------ecccccCCCCC------------ceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEE
Q 023672 213 ---------TLKGNKEGQAG------------IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHV 271 (279)
Q Consensus 213 ---------~~~~~~~~~~~------------~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 271 (279)
.....+.+|.. .|.+++|+| ++.+|++|+.||.|++||+++++++..+..|..+|+++
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 321 (368)
T 3mmy_A 243 HYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHP-VHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISAC 321 (368)
T ss_dssp EESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECT-TTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEE
T ss_pred EecCCCCccccceeeeeeecccccccccccccceEEEEEec-CCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEE
Confidence 00001123333 699999999 89999999999999999999999999999999999999
Q ss_pred EEccCCCC
Q 023672 272 SKLSSAYT 279 (279)
Q Consensus 272 ~~spdg~~ 279 (279)
+|+|||++
T Consensus 322 ~~s~~g~~ 329 (368)
T 3mmy_A 322 CFNHNGNI 329 (368)
T ss_dssp EECTTSSC
T ss_pred EECCCCCe
Confidence 99999975
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.5e-30 Score=220.55 Aligned_cols=198 Identities=17% Similarity=0.236 Sum_probs=158.2
Q ss_pred ccCCCCCceEEEEEccCCC-eEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 55 TSSIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
.+.+|.+.|++++|+|++. .|++|+.|++|++||..+++... ....|...|.+++|
T Consensus 142 ~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~-----------------~l~~H~~~V~~v~f------ 198 (611)
T 1nr0_A 142 NLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKS-----------------TFGEHTKFVHSVRY------ 198 (611)
T ss_dssp CCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEE-----------------EECCCSSCEEEEEE------
T ss_pred eecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEee-----------------eeccccCceEEEEE------
Confidence 6789999999999999987 59999999999999987543211 23456778999987
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCeeeEEEecc--CccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceee
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY--DAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~ 210 (279)
+|++++|++++.|++|++||+.+++....+... ...++...|.+++|+|++++|+++ .|+.|++||++++ +....
T Consensus 199 -spdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~-~~~~~ 276 (611)
T 1nr0_A 199 -NPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATL-KVEKT 276 (611)
T ss_dssp -CTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT-EEEEE
T ss_pred -CCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCC-ceeee
Confidence 778999999999999999999999888777420 001222389999999999999965 9999999999873 21111
Q ss_pred ee------------------------------------ecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCC
Q 023672 211 YS------------------------------------TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (279)
Q Consensus 211 ~~------------------------------------~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~ 254 (279)
+. .......+|...|.+++|+| ++.+|++++.|+.|++||+.+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~sp-dg~~l~s~s~D~~v~~Wd~~~ 355 (611)
T 1nr0_A 277 IPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSA-DGKTLFSADAEGHINSWDIST 355 (611)
T ss_dssp EECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTT
T ss_pred ecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeC-CCCEEEEEeCCCcEEEEECCC
Confidence 10 00112358999999999999 999999999999999999999
Q ss_pred CeEEEEE-eecCCCEEEEEEccCCC
Q 023672 255 MELLYVL-HGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 255 ~~~~~~~-~~~~~~v~~~~~spdg~ 278 (279)
+++...+ .+|...|.+++|+++++
T Consensus 356 ~~~~~~~~~~h~~~v~~~~~s~~~~ 380 (611)
T 1nr0_A 356 GISNRVFPDVHATMITGIKTTSKGD 380 (611)
T ss_dssp CCEEECSSCSCSSCEEEEEECTTSC
T ss_pred CceeeecccCCcceEEEEEECCCCc
Confidence 9887665 56889999999998874
No 42
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=100.00 E-value=4.9e-30 Score=208.15 Aligned_cols=219 Identities=15% Similarity=0.283 Sum_probs=158.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCcccccccccc------------
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACS------------ 102 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~------------ 102 (279)
.+++||..+++..... .+.+|.+.|++|+|+|+|++|++|+.||+|+|||+.+++.........
T Consensus 126 tV~lWd~~tg~~~~~~----~~~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~ 201 (420)
T 4gga_A 126 SVYLWSASSGDILQLL----QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYI 201 (420)
T ss_dssp EEEEEETTTCCEEEEE----ECCSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTE
T ss_pred EEEEEECCCCCEEEEE----EecCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCE
Confidence 4678888888765421 356788999999999999999999999999999999876532211100
Q ss_pred c-cCCCCc-----------ccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCee----eEEEec
Q 023672 103 L-AKDQDS-----------YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL----RCTYRA 166 (279)
Q Consensus 103 ~-~~~~~~-----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~----~~~~~~ 166 (279)
+ ....+. ........|...+..+. ++|++.++++++.|+.|++|+..+++. +.....
T Consensus 202 l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~-------~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~ 274 (420)
T 4gga_A 202 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR-------WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ 274 (420)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE-------ECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECC
T ss_pred EEEEeCCCceeEeeecccceeeEEecccccceeeee-------ecCCCCeeeeeeccccceEEeeccccccceeeeeecc
Confidence 0 000000 00011122333444444 478899999999999999999987653 334444
Q ss_pred cCccccccceeeEEECCCCC-EEEE--e-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEe
Q 023672 167 YDAVDEITAAFSVAFNPTGT-KIFA--G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 167 ~~~~~~~~~v~~~~~~~~~~-~l~~--~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~ 242 (279)
+.. .|.+++|+|.+. ++++ | .|+.|++||+.++ .....+ .+...+.++.|+| ++..+++++
T Consensus 275 ~~~-----~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~----~~~~~~-----~~~~~v~~~~~~~-~~~~lv~~s 339 (420)
T 4gga_A 275 HQG-----AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG----ACLSAV-----DAHSQVCSILWSP-HYKELISGH 339 (420)
T ss_dssp CSS-----CEEEEEECTTCTTEEEEEECTTTCEEEEEETTTT----EEEEEE-----ECSSCEEEEEEET-TTTEEEEEE
T ss_pred cCC-----ceeeeeeCCCcccEEEEEeecCCCEEEEEeCCcc----ccceee-----ccccceeeeeecC-CCCeEEEEE
Confidence 444 899999999764 4442 4 7999999999984 333333 2345689999999 666666654
Q ss_pred --CCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 243 --YSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 243 --~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.|+.|+|||+++++++..+.+|.+.|++++|+|||++
T Consensus 340 g~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~ 378 (420)
T 4gga_A 340 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGAT 378 (420)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred ecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 7999999999999999999999999999999999975
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.98 E-value=1.5e-30 Score=207.50 Aligned_cols=209 Identities=14% Similarity=0.180 Sum_probs=165.7
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.++.. .....+.+|.+.|.+++|+|++++|++++.||.|++||+.++..... ..
T Consensus 31 ~v~i~~~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~---------------~~ 91 (372)
T 1k8k_C 31 EVHIYEKSGNKW----VQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKPT---------------LV 91 (372)
T ss_dssp EEEEEEEETTEE----EEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEEE---------------EE
T ss_pred EEEEEeCCCCcE----EeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCCeeeee---------------EE
Confidence 577888877651 12236678999999999999999999999999999999976532111 01
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCee---eEEE-eccCccccccceeeEEECCCCCEEEE
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLL---RCTY-RAYDAVDEITAAFSVAFNPTGTKIFA 190 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~---~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~ 190 (279)
...+...|.+++| +|++++|++++.|+.|++||++.+.. ...+ ..+.. .|.+++|+|+++++++
T Consensus 92 ~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~ 159 (372)
T 1k8k_C 92 ILRINRAARCVRW-------APNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRS-----TVLSLDWHPNSVLLAA 159 (372)
T ss_dssp CCCCSSCEEEEEE-------CTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCS-----CEEEEEECTTSSEEEE
T ss_pred eecCCCceeEEEE-------CCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCC-----CeeEEEEcCCCCEEEE
Confidence 2345678888887 67899999999999999999988763 2222 22333 8999999999999997
Q ss_pred e-cCCeEEEEEccCCCC--------------ceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCC
Q 023672 191 G-YNKSVRVFDVHRPGR--------------DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (279)
Q Consensus 191 ~-~d~~i~~~d~~~~~~--------------~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~ 255 (279)
+ .|+.|++||++.... .......+ .+|...|.+++|+| ++.+|++++.|+.|++||++++
T Consensus 160 ~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~~~-~~~~l~~~~~d~~i~i~d~~~~ 234 (372)
T 1k8k_C 160 GSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFES----SSSCGWVHGVCFSA-NGSRVAWVSHDSTVCLADADKK 234 (372)
T ss_dssp EETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEEC----CCCSSCEEEEEECS-SSSEEEEEETTTEEEEEEGGGT
T ss_pred EcCCCCEEEEEcccccccccccccccccccchhhheEec----CCCCCeEEEEEECC-CCCEEEEEeCCCEEEEEECCCC
Confidence 6 899999999753110 01222233 57888999999999 8899999999999999999999
Q ss_pred eEEEEEeecCCCEEEEEEccCCCC
Q 023672 256 ELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 256 ~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+++..+..|..+|.+++|+|+|++
T Consensus 235 ~~~~~~~~~~~~v~~~~~~~~~~~ 258 (372)
T 1k8k_C 235 MAVATLASETLPLLAVTFITESSL 258 (372)
T ss_dssp TEEEEEECSSCCEEEEEEEETTEE
T ss_pred ceeEEEccCCCCeEEEEEecCCCE
Confidence 999999999999999999999863
No 44
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=7.5e-31 Score=216.98 Aligned_cols=220 Identities=10% Similarity=0.045 Sum_probs=161.1
Q ss_pred cceeeeeeEecCCCCcccceeeeeeccCCCCCceEEEEEccC------CCeEEEeeCCCeEEEEeCCCCccccccccccc
Q 023672 30 QEYTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD------GSSFLTSSEDKTLRIFSLPENGISYDVNACSL 103 (279)
Q Consensus 30 ~~~~~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~------~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~ 103 (279)
....-.+.+||+.++.... .....+.+|.+.|.+++|+|+ +.+||+++.||+|+|||+.++....... ..
T Consensus 179 ~s~D~tI~iWd~~~~~~~~--~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~-~~- 254 (524)
T 2j04_B 179 EKHSSCIQIFKMNTSTLHC--VKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVF-KM- 254 (524)
T ss_dssp ---CEEEEEEEEETTTCCE--EEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEE-EC-
T ss_pred CCCCceEEEEEccCCCCCc--eEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccc-ee-
Confidence 3444567889887765421 111245668899999999996 5799999999999999998653211000 00
Q ss_pred cCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCe-eeEEEeccCccccccceeeE--E
Q 023672 104 AKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSV--A 180 (279)
Q Consensus 104 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~~--~ 180 (279)
.... ......+...|.+++|+ ++ ..|++|+.||+|++||++++. +...+..|.. .|.++ .
T Consensus 255 ---~~~p-~~~l~~h~~~v~sv~~s-------~~-~~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~-----~V~sv~~~ 317 (524)
T 2j04_B 255 ---CEKP-SLTLSLADSLITTFDFL-------SP-TTVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS-----YILSVSTA 317 (524)
T ss_dssp ---CCSC-SEEECCTTTCEEEEEES-------SS-SEEEEEETTSEEEEEETTBCSSCSEEEECSSS-----CEEEEEEE
T ss_pred ---ecCc-eEEEEcCCCCEEEEEec-------CC-CeEEEEeCCCEEEEEECCCCCCceEEeecccc-----cEEEEEEE
Confidence 0000 01223466789999884 43 379999999999999999764 4455677765 89999 5
Q ss_pred ECCCC-CEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCC--CceEEEEEccCCCcEEEEEeCCCcEEEEecCCCe
Q 023672 181 FNPTG-TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA--GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (279)
Q Consensus 181 ~~~~~-~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~ 256 (279)
|+|++ .+|+++ .|++|+|||++++ +....+ .+|. ..|.+++|+| ++..+++++.|++|++||++++.
T Consensus 318 ~s~~g~~~laS~S~D~tvklWD~~~~----~~~~~~----~~~~~~~~v~~v~fsp-~~~~l~s~~~d~tv~lwd~~~~~ 388 (524)
T 2j04_B 318 YSDFEDTVVSTVAVDGYFYIFNPKDI----ATTKTT----VSRFRGSNLVPVVYCP-QIYSYIYSDGASSLRAVPSRAAF 388 (524)
T ss_dssp CCTTSCCEEEEEETTSEEEEECGGGH----HHHCEE----EEECSCCSCCCEEEET-TTTEEEEECSSSEEEEEETTCTT
T ss_pred cCCCCCeEEEEeccCCeEEEEECCCC----Cccccc----ccccccCcccceEeCC-CcCeEEEeCCCCcEEEEECcccc
Confidence 78887 788865 9999999999873 111122 2332 2478999999 88899999999999999999999
Q ss_pred EEEEEeecCCCEEEEEEccCCCC
Q 023672 257 LLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 257 ~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
++..+.+|.+.|++++|||+|++
T Consensus 389 ~~~~l~gH~~~V~sva~Sp~g~~ 411 (524)
T 2j04_B 389 AVHPLVSRETTITAIGVSRLHPM 411 (524)
T ss_dssp CCEEEEECSSCEEEEECCSSCCB
T ss_pred cceeeecCCCceEEEEeCCCCCe
Confidence 88889999999999999999964
No 45
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.98 E-value=5.1e-30 Score=220.43 Aligned_cols=207 Identities=20% Similarity=0.288 Sum_probs=162.4
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++|++.+..... ......+.+|.+.|.+++|+|++++|++|+.||+|+|||+.++.... .
T Consensus 406 ~i~~W~~~~~~~~~-~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~-----------------~ 467 (694)
T 3dm0_A 406 SIILWKLTKDDKAY-GVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTR-----------------R 467 (694)
T ss_dssp EEEEEECCCSTTCS-CEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEE-----------------E
T ss_pred cEEEEEccCCCccc-ccccceecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCccee-----------------E
Confidence 56777776543221 11233678999999999999999999999999999999998754321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCC--CEEEEe-
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG--TKIFAG- 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~- 191 (279)
...|...|.+++| +|++.+|++|+.|++|++||+.......... ...++...|.+++|+|++ ..++++
T Consensus 468 ~~~h~~~v~~~~~-------s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~--~~~~h~~~v~~~~~~~~~~~~~l~s~s 538 (694)
T 3dm0_A 468 FVGHTKDVLSVAF-------SLDNRQIVSASRDRTIKLWNTLGECKYTISE--GGEGHRDWVSCVRFSPNTLQPTIVSAS 538 (694)
T ss_dssp EECCSSCEEEEEE-------CTTSSCEEEEETTSCEEEECTTSCEEEEECS--STTSCSSCEEEEEECSCSSSCEEEEEE
T ss_pred EeCCCCCEEEEEE-------eCCCCEEEEEeCCCEEEEEECCCCcceeecc--CCCCCCCcEEEEEEeCCCCcceEEEEe
Confidence 3457778999987 7789999999999999999987554332221 112233379999999987 466755
Q ss_pred cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEE
Q 023672 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHV 271 (279)
Q Consensus 192 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~ 271 (279)
.|+.|++||+++. +....+ .+|...|.+++|+| ++.+|++|+.||.|++||+++++++..+.. ...|.++
T Consensus 539 ~d~~v~vwd~~~~----~~~~~~----~~h~~~v~~v~~sp-dg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~-~~~v~~~ 608 (694)
T 3dm0_A 539 WDKTVKVWNLSNC----KLRSTL----AGHTGYVSTVAVSP-DGSLCASGGKDGVVLLWDLAEGKKLYSLEA-NSVIHAL 608 (694)
T ss_dssp TTSCEEEEETTTC----CEEEEE----CCCSSCEEEEEECT-TSSEEEEEETTSBCEEEETTTTEEEECCBC-SSCEEEE
T ss_pred CCCeEEEEECCCC----cEEEEE----cCCCCCEEEEEEeC-CCCEEEEEeCCCeEEEEECCCCceEEEecC-CCcEEEE
Confidence 9999999999873 222333 68999999999999 899999999999999999999999888764 5689999
Q ss_pred EEccCCC
Q 023672 272 SKLSSAY 278 (279)
Q Consensus 272 ~~spdg~ 278 (279)
+|+|+++
T Consensus 609 ~~sp~~~ 615 (694)
T 3dm0_A 609 CFSPNRY 615 (694)
T ss_dssp EECSSSS
T ss_pred EEcCCCc
Confidence 9999986
No 46
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.1e-30 Score=205.38 Aligned_cols=209 Identities=18% Similarity=0.222 Sum_probs=161.4
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccC--CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD--GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+.+||+..... .....+.+|.+.|++++|+++ +++|++|+.||.|++||+.++.... .
T Consensus 34 ~i~iw~~~~~~~----~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~---------------~ 94 (379)
T 3jrp_A 34 TIKIFEVEGETH----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ---------------I 94 (379)
T ss_dssp CEEEEEEETTEE----EEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEEE---------------E
T ss_pred cEEEEecCCCcc----eeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCceeE---------------e
Confidence 467777753221 223367889999999999987 8999999999999999998753110 0
Q ss_pred eeeecCCCceEEEEeeCcccccCCC--CcEEEEecCCCcEEEEECCCCee--eEEEeccCccccccceeeEEECC-----
Q 023672 113 SLVVTEGESVYDFCWFPHMSASDPT--SCVFASTTRDHPIHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNP----- 183 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~----- 183 (279)
.....+...|.+++| +|+ +.+|++++.|+.|++||++++.. ...+..+.. .|.+++|+|
T Consensus 95 ~~~~~~~~~v~~~~~-------~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~ 162 (379)
T 3jrp_A 95 AVHAVHSASVNSVQW-------APHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-----GVNSASWAPATIEE 162 (379)
T ss_dssp EEECCCSSCEEEEEE-------CCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTT-----CEEEEEECCCC---
T ss_pred eeecCCCcceEEEEe-------CCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCC-----ceEEEEEcCccccc
Confidence 123346678999988 556 88999999999999999998743 333444444 899999999
Q ss_pred --------CCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCC---CcEEEEEeCCCcEEEEe
Q 023672 184 --------TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH---TGMLAIGSYSQTSAIYR 251 (279)
Q Consensus 184 --------~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~---~~~l~~~~~dg~i~~wd 251 (279)
++.+++++ .|+.|++||++.+.........+ .+|...|.+++|+| + +.+|++++.||.|++||
T Consensus 163 ~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~----~~h~~~v~~~~~sp-~~~~~~~l~s~~~dg~i~iwd 237 (379)
T 3jrp_A 163 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL----EGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCIIWT 237 (379)
T ss_dssp -------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEE----CCCSSCEEEEEECC-CCSSSEEEEEEETTSCEEEEE
T ss_pred cccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEE----ecccCcEeEEEECC-CCCCCCeEEEEeCCCEEEEEe
Confidence 68888866 99999999999754443444444 68899999999999 7 89999999999999999
Q ss_pred cCCCe---EEEEE--eecCCCEEEEEEccCCCC
Q 023672 252 EDNME---LLYVL--HGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 252 ~~~~~---~~~~~--~~~~~~v~~~~~spdg~~ 279 (279)
++++. ....+ ..|...|++++|+|||++
T Consensus 238 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 270 (379)
T 3jrp_A 238 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV 270 (379)
T ss_dssp ESSTTSCCEEEESSSSCCSSCEEEEEECSSSCC
T ss_pred CCCCCccceeeeeccccCCCcEEEEEEcCCCCE
Confidence 99874 22222 237889999999999974
No 47
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.98 E-value=1.2e-29 Score=204.64 Aligned_cols=213 Identities=18% Similarity=0.266 Sum_probs=163.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+|++...... ......+.+|.+.|++++|+| ++++|++|+.||+|+|||+.++......... ..
T Consensus 58 ~i~v~~~~~~~~~--~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~----------~~ 125 (402)
T 2aq5_A 58 AFLVLPLGKTGRV--DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREP----------VI 125 (402)
T ss_dssp CEEEEETTCCEEC--CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSC----------SE
T ss_pred EEEEEECccCCCC--CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCc----------eE
Confidence 4667776543211 012235778999999999999 9999999999999999999876432211111 11
Q ss_pred eeecCCCceEEEEeeCcccccCCCC-cEEEEecCCCcEEEEECCCCeeeEEE--eccCccccccceeeEEECCCCCEEEE
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTY--RAYDAVDEITAAFSVAFNPTGTKIFA 190 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~v~~~~~~~~~~~l~~ 190 (279)
....|...|.+++| +|++ .+|++++.|+.|++||+++++.+..+ ..+.. .|.+++|+|++++|++
T Consensus 126 ~~~~h~~~v~~~~~-------~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~ 193 (402)
T 2aq5_A 126 TLEGHTKRVGIVAW-------HPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD-----TIYSVDWSRDGALICT 193 (402)
T ss_dssp EEECCSSCEEEEEE-------CSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS-----CEEEEEECTTSSCEEE
T ss_pred EecCCCCeEEEEEE-------CcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC-----ceEEEEECCCCCEEEE
Confidence 33457789999988 5666 69999999999999999999998888 55554 8999999999999996
Q ss_pred e-cCCeEEEEEccCCCCceeeeeecccccCCCCCc-eEEEEEccCCCcEEEEE---eCCCcEEEEecCCCeE-EEEEe-e
Q 023672 191 G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGI-MSAIAFSPTHTGMLAIG---SYSQTSAIYREDNMEL-LYVLH-G 263 (279)
Q Consensus 191 ~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~sp~~~~~l~~~---~~dg~i~~wd~~~~~~-~~~~~-~ 263 (279)
+ .|+.|++||++++ .....+. .+|.+. +.+++|+| ++.+|++| +.|+.|++||+++++. +.... .
T Consensus 194 ~~~d~~i~iwd~~~~----~~~~~~~---~~~~~~~~~~~~~~~-~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~ 265 (402)
T 2aq5_A 194 SCRDKRVRVIEPRKG----TVVAEKD---RPHEGTRPVHAVFVS-EGKILTTGFSRMSERQVALWDTKHLEEPLSLQELD 265 (402)
T ss_dssp EETTSEEEEEETTTT----EEEEEEE---CSSCSSSCCEEEECS-TTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECC
T ss_pred EecCCcEEEEeCCCC----ceeeeec---cCCCCCcceEEEEcC-CCcEEEEeccCCCCceEEEEcCccccCCceEEecc
Confidence 6 9999999999974 2222221 355554 89999999 89999999 7899999999998764 33333 4
Q ss_pred cCCCEEEEEEccCCCC
Q 023672 264 QEGGVTHVSKLSSAYT 279 (279)
Q Consensus 264 ~~~~v~~~~~spdg~~ 279 (279)
|...|.+++|+|||++
T Consensus 266 ~~~~v~~~~~s~~~~~ 281 (402)
T 2aq5_A 266 TSSGVLLPFFDPDTNI 281 (402)
T ss_dssp CCSSCEEEEEETTTTE
T ss_pred CCCceeEEEEcCCCCE
Confidence 6778999999999863
No 48
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.3e-29 Score=200.30 Aligned_cols=217 Identities=9% Similarity=0.053 Sum_probs=168.0
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCcccccccc------ccccCCC-
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA------CSLAKDQ- 107 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~------~~~~~~~- 107 (279)
.+.+||+.+++... .+.+|.+.|.+++|+|++++|++++.||.|++||+.++........ ....+..
T Consensus 55 ~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~ 128 (369)
T 3zwl_B 55 SASVWYSLNGERLG------TLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGN 128 (369)
T ss_dssp CEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSS
T ss_pred EEEEEeCCCchhhh------hhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCC
Confidence 57889988877655 6778999999999999999999999999999999988765322210 0000000
Q ss_pred -------C-----cccceeeecC---------------------CC--ceEEEEeeCcccccCCCCcEEEEecCCCcEEE
Q 023672 108 -------D-----SYEASLVVTE---------------------GE--SVYDFCWFPHMSASDPTSCVFASTTRDHPIHL 152 (279)
Q Consensus 108 -------~-----~~~~~~~~~~---------------------~~--~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 152 (279)
+ ..+....... .. .+.++ +++|++++|++++.|+.|++
T Consensus 129 ~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~l~~~~~dg~i~i 201 (369)
T 3zwl_B 129 YFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVA-------GWSTKGKYIIAGHKDGKISK 201 (369)
T ss_dssp EEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEE-------EECGGGCEEEEEETTSEEEE
T ss_pred EEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEE-------EEcCCCCEEEEEcCCCEEEE
Confidence 0 0000000000 00 33444 45788999999999999999
Q ss_pred EECCC-CeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEE
Q 023672 153 WDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAF 230 (279)
Q Consensus 153 ~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 230 (279)
||+++ ++....+..+.. .|.+++|+|++.+|+++ .|+.|++||+++. . ....+ .+...+.+++|
T Consensus 202 ~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~-~---~~~~~-----~~~~~~~~~~~ 267 (369)
T 3zwl_B 202 YDVSNNYEYVDSIDLHEK-----SISDMQFSPDLTYFITSSRDTNSFLVDVSTL-Q---VLKKY-----ETDCPLNTAVI 267 (369)
T ss_dssp EETTTTTEEEEEEECCSS-----CEEEEEECTTSSEEEEEETTSEEEEEETTTC-C---EEEEE-----ECSSCEEEEEE
T ss_pred EECCCCcEeEEEEecCCC-----ceeEEEECCCCCEEEEecCCceEEEEECCCC-c---eeeee-----cCCCCceeEEe
Confidence 99998 788888887765 89999999999999966 9999999999974 2 22222 25678999999
Q ss_pred ccCCCcEEEEEeCCC--------------cEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 231 SPTHTGMLAIGSYSQ--------------TSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 231 sp~~~~~l~~~~~dg--------------~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+| ++.++++++.++ .+++||+.+++++..+.+|...|++++|+|||++
T Consensus 268 ~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 329 (369)
T 3zwl_B 268 TP-LKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTS 329 (369)
T ss_dssp CS-SSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSE
T ss_pred cC-CCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCE
Confidence 99 899999999888 8999999999999999999999999999999873
No 49
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=2.5e-29 Score=198.10 Aligned_cols=195 Identities=19% Similarity=0.297 Sum_probs=160.1
Q ss_pred eccCCCCCceEEEEEccC-CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccc
Q 023672 54 RTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (279)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (279)
.++.||++.|++|+|+|+ +++|+||+.|++|+|||+.+....... .......|...|.+++|
T Consensus 32 ~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~------------~~~~l~~h~~~V~~~~~----- 94 (340)
T 4aow_A 32 GTLKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGI------------PQRALRGHSHFVSDVVI----- 94 (340)
T ss_dssp EEECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEE------------EEEEECCCSSCEEEEEE-----
T ss_pred EEECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccce------------eeEEEeCCCCCEEEEEE-----
Confidence 378999999999999997 689999999999999999865321110 01123456778999987
Q ss_pred ccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeee
Q 023672 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~ 211 (279)
+|++++|++++.|+.|++|+............+.. .+..+.+++++.+++++ .|+.+++||+.... ..
T Consensus 95 --s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~---~~- 163 (340)
T 4aow_A 95 --SSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTK-----DVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVC---KY- 163 (340)
T ss_dssp --CTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSS-----CEEEEEECTTSSCEEEEETTSCEEEECTTSCE---EE-
T ss_pred --CCCCCEEEEEcccccceEEeecccceeeeecCCCC-----ceeEEEEeecCccceeecCCCeEEEEEeCCCc---eE-
Confidence 77899999999999999999999888777776665 77889999999999866 99999999997631 11
Q ss_pred eecccccCCCCCceEEEEEccCC-CcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 212 STLKGNKEGQAGIMSAIAFSPTH-TGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~sp~~-~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.....+|...+..++|+++. ..++++++.|+.|++||+++++++..+.+|.++|++++|+|||++
T Consensus 164 ---~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~ 229 (340)
T 4aow_A 164 ---TVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSL 229 (340)
T ss_dssp ---EECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSE
T ss_pred ---EEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCE
Confidence 11226888999999999832 357889999999999999999999999999999999999999863
No 50
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.97 E-value=8.4e-30 Score=207.34 Aligned_cols=216 Identities=18% Similarity=0.294 Sum_probs=163.8
Q ss_pred eeeEecCCCCcccc----eeeeeeccCCCCCceEEEEEccCCC-eEEEeeCCCeEEEEeCCCCccccccccccccCCCCc
Q 023672 35 PLIRFDVPPHRTYH----FYNQFRTSSIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDS 109 (279)
Q Consensus 35 ~~~~~d~~~~~~~~----~~~~~~~~~~h~~~v~~~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 109 (279)
.+.+|++.+..... .......+.+|.+.|.+++|+|++. +|++|+.||.|++|++.++.........
T Consensus 152 ~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~-------- 223 (430)
T 2xyi_A 152 DVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDA-------- 223 (430)
T ss_dssp CEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBGGGEEEC--------
T ss_pred cEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCCCceecc--------
Confidence 46677776421000 0122235678999999999999988 9999999999999999864321110000
Q ss_pred ccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCC---eeeEEEeccCccccccceeeEEECCCCC
Q 023672 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTG---LLRCTYRAYDAVDEITAAFSVAFNPTGT 186 (279)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 186 (279)
......|...|.+++|+|. ++.+|++++.|+.|++||++++ +....+..+.. .|.+++|+|++.
T Consensus 224 --~~~~~~h~~~v~~v~~~p~------~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~~-----~v~~i~~~p~~~ 290 (430)
T 2xyi_A 224 --KNIFTGHTAVVEDVAWHLL------HESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTA-----EVNCLSFNPYSE 290 (430)
T ss_dssp --SEEECCCSSCEEEEEECSS------CTTEEEEEETTSEEEEEETTCSCSSSCSEEEECCSS-----CEEEEEECSSCT
T ss_pred --ceeecCCCCCEeeeEEeCC------CCCEEEEEeCCCeEEEEECCCCCCCcceeEeecCCC-----CeEEEEeCCCCC
Confidence 1123356778999988542 5779999999999999999987 46666666665 899999999987
Q ss_pred -EEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCC----------
Q 023672 187 -KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN---------- 254 (279)
Q Consensus 187 -~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~---------- 254 (279)
++++| .|+.|++||++....+. ..+ .+|...|.+++|+|++..+|++++.|+.|++||+..
T Consensus 291 ~~l~tg~~dg~v~vwd~~~~~~~~---~~~----~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~ 363 (430)
T 2xyi_A 291 FILATGSADKTVALWDLRNLKLKL---HSF----ESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDA 363 (430)
T ss_dssp TEEEEEETTSEEEEEETTCTTSCS---EEE----ECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHH
T ss_pred CEEEEEeCCCeEEEEeCCCCCCCe---EEe----ecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCcccc
Confidence 46665 99999999999743322 222 578889999999994446899999999999999987
Q ss_pred ----CeEEEEEeecCCCEEEEEEccCCC
Q 023672 255 ----MELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 255 ----~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
.+++..+.+|...|++++|+|+|+
T Consensus 364 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 391 (430)
T 2xyi_A 364 EDGPPELLFIHGGHTAKISDFSWNPNEP 391 (430)
T ss_dssp HHCCTTEEEECCCCSSCEEEEEECSSST
T ss_pred ccCCcceEEEcCCCCCCceEEEECCCCC
Confidence 367778888999999999999986
No 51
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4e-30 Score=208.13 Aligned_cols=219 Identities=13% Similarity=0.183 Sum_probs=168.1
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccC-CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||+.....- ......+.+|.+.|.+++|+|+ +++|++++.||.|++||+.++......... ....
T Consensus 90 ~v~vw~~~~~~~~--~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~--------~~~~ 159 (416)
T 2pm9_A 90 SLELYSTNEANNA--INSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTP--------LTPG 159 (416)
T ss_dssp CEEEECCSSTTSC--CCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCC--------BCCC
T ss_pred eEEEeeccccccc--ccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccc--------cccc
Confidence 5678887762110 0123367889999999999998 899999999999999999876411000000 0001
Q ss_pred eeecCCCceEEEEeeCcccccCCC-CcEEEEecCCCcEEEEECCCCeeeEEEeccCcc-ccccceeeEEECCCC-CEEEE
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPT-SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV-DEITAAFSVAFNPTG-TKIFA 190 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~-~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~-~~l~~ 190 (279)
....+...|.+++| +|+ +.+|++++.|+.|++||+++++.+..+..+... ++...|.+++|+|++ .++++
T Consensus 160 ~~~~~~~~v~~~~~-------~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 160 QSMSSVDEVISLAW-------NQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CSCCSSCCCCEEEE-------CSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEE
T ss_pred cccCCCCCeeEEEe-------CCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEE
Confidence 12346668888887 556 789999999999999999999988888765210 112389999999997 56776
Q ss_pred e-cCC---eEEEEEccCCCCceeeeeecccccC-CCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC
Q 023672 191 G-YNK---SVRVFDVHRPGRDFEKYSTLKGNKE-GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265 (279)
Q Consensus 191 ~-~d~---~i~~~d~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 265 (279)
+ .|+ .|++||++++..... .+ . +|...|.+++|+|+++.+|++++.||.|++||+++++++..+..|.
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~~~---~~----~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~ 305 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTPLQ---TL----NQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARG 305 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSCSB---CC----CSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSS
T ss_pred EECCCCCceEEEEeCCCCCCCcE---Ee----ecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCC
Confidence 5 777 999999997432222 22 4 7889999999999778899999999999999999999999999999
Q ss_pred CCEEEEEEccCC
Q 023672 266 GGVTHVSKLSSA 277 (279)
Q Consensus 266 ~~v~~~~~spdg 277 (279)
..|.+++|+|+|
T Consensus 306 ~~v~~~~~s~~~ 317 (416)
T 2pm9_A 306 NWCFKTKFAPEA 317 (416)
T ss_dssp SCCCCEEECTTC
T ss_pred CceEEEEECCCC
Confidence 999999999998
No 52
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=4.8e-30 Score=208.06 Aligned_cols=205 Identities=15% Similarity=0.177 Sum_probs=161.6
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.++.... .+.+|.+.|++++|+|++++|++|+.|+.|++||+.++.... .
T Consensus 120 ~i~iwd~~~~~~~~------~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~-----------------~ 176 (420)
T 3vl1_A 120 DIKVLDSNFNLQRE------IDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPR-----------------T 176 (420)
T ss_dssp CEEEECTTSCEEEE------ETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCE-----------------E
T ss_pred CEEEEeCCCcceee------ecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCce-----------------E
Confidence 56788877665543 567999999999999999999999999999999998654321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccc-------------------cccc
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD-------------------EITA 175 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~-------------------~~~~ 175 (279)
...|...|.+++| +|++.+|++++.|+.|++||+++++.+..+..+.... +...
T Consensus 177 ~~~h~~~v~~~~~-------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 249 (420)
T 3vl1_A 177 LIGHRATVTDIAI-------IDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSK 249 (420)
T ss_dssp EECCSSCEEEEEE-------ETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCC
T ss_pred EcCCCCcEEEEEE-------cCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCc
Confidence 3457778999988 5688899999999999999999999888887543110 1125
Q ss_pred eeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEecC
Q 023672 176 AFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYRED 253 (279)
Q Consensus 176 v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~~ 253 (279)
+.+++|+|++++++++ .|+.|++||++++. ....+ ...|...|.+++|+| ++. +|++|+.||.|++||++
T Consensus 250 v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~----~~~~~---~~~~~~~v~~~~~~~-~~~~~l~~g~~dg~i~vwd~~ 321 (420)
T 3vl1_A 250 KNNLEFGTYGKYVIAGHVSGVITVHNVFSKE----QTIQL---PSKFTCSCNSLTVDG-NNANYIYAGYENGMLAQWDLR 321 (420)
T ss_dssp CCTTCSSCTTEEEEEEETTSCEEEEETTTCC----EEEEE---CCTTSSCEEEEEECS-SCTTEEEEEETTSEEEEEETT
T ss_pred ccceEEcCCCCEEEEEcCCCeEEEEECCCCc----eeEEc---ccccCCCceeEEEeC-CCCCEEEEEeCCCeEEEEEcC
Confidence 6667788999999976 99999999998742 11122 146788999999999 666 99999999999999999
Q ss_pred CCe-EEEEEee-cCCCEEEEEEccCCC
Q 023672 254 NME-LLYVLHG-QEGGVTHVSKLSSAY 278 (279)
Q Consensus 254 ~~~-~~~~~~~-~~~~v~~~~~spdg~ 278 (279)
+++ ++..+.. |...|.++.|+ +|+
T Consensus 322 ~~~~~~~~~~~~~~~~v~~~~~~-~~~ 347 (420)
T 3vl1_A 322 SPECPVGEFLINEGTPINNVYFA-AGA 347 (420)
T ss_dssp CTTSCSEEEEESTTSCEEEEEEE-TTE
T ss_pred CCcCchhhhhccCCCCceEEEeC-CCC
Confidence 875 4777777 66788888554 553
No 53
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=2.4e-29 Score=211.85 Aligned_cols=196 Identities=23% Similarity=0.399 Sum_probs=162.7
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||...... ..+.+|...|.+++|+|++++|++++.||.|++||.... .. ..
T Consensus 326 ~i~~w~~~~~~~-------~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~~~~-~~-----------------~~ 380 (577)
T 2ymu_A 326 TVKLWNRNGQHL-------QTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQ-LL-----------------QT 380 (577)
T ss_dssp CEEEEETTSCEE-------EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTCC-EE-----------------EE
T ss_pred eEEEEeCCCCee-------EEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcCCCC-EE-----------------EE
Confidence 356677654432 256789999999999999999999999999999996532 10 12
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...+...|.+++| +|++++|++++.|+.|++||. +++.+..+..+.. .|++++|+|++++++++ .|
T Consensus 381 ~~~~~~~v~~~~~-------s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~~-----~v~~~~~s~d~~~l~~~~~d 447 (577)
T 2ymu_A 381 LTGHSSSVRGVAF-------SPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSS-----SVWGVAFSPDDQTIASASDD 447 (577)
T ss_dssp EECCSSCEEEEEE-------CTTSSCEEEEETTSEEEEECT-TCCEEEEEECCSS-----CEEEEEECTTSSEEEEEETT
T ss_pred ecCCCCCeEEEEE-------CCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCCC-----CeEEEEECCCCCEEEEEcCC
Confidence 2346678888876 788999999999999999995 5677777777765 89999999999999965 99
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
+.|++||... +....+ .+|...|.+++|+| ++.+|++++.|+.|++|| .+++++..+.+|...|++++|
T Consensus 448 ~~v~~w~~~~-----~~~~~~----~~~~~~v~~~~~sp-d~~~las~~~d~~i~iw~-~~~~~~~~~~~h~~~v~~l~~ 516 (577)
T 2ymu_A 448 KTVKLWNRNG-----QLLQTL----TGHSSSVRGVAFSP-DGQTIASASDDKTVKLWN-RNGQLLQTLTGHSSSVRGVAF 516 (577)
T ss_dssp SEEEEEETTS-----CEEEEE----ECCSSCEEEEEECT-TSCEEEEEETTSEEEEEE-TTSCEEEEEECCSSCEEEEEE
T ss_pred CEEEEEECCC-----CEEEEE----cCCCCCEEEEEEcC-CCCEEEEEeCCCEEEEEc-CCCCEEEEEeCCCCCEEEEEE
Confidence 9999999753 233333 58889999999999 999999999999999999 478899999999999999999
Q ss_pred ccCCCC
Q 023672 274 LSSAYT 279 (279)
Q Consensus 274 spdg~~ 279 (279)
+|||++
T Consensus 517 s~dg~~ 522 (577)
T 2ymu_A 517 SPDGQT 522 (577)
T ss_dssp CTTSSC
T ss_pred cCCCCE
Confidence 999975
No 54
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.3e-29 Score=199.39 Aligned_cols=197 Identities=15% Similarity=0.194 Sum_probs=161.1
Q ss_pred eeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcc
Q 023672 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (279)
Q Consensus 52 ~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (279)
....+.+|.+.|++++|+|++++|++|+.||.|++||+.++.... ....+...|.+++|
T Consensus 24 ~~~~l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~-----------------~~~~h~~~v~~~~~---- 82 (369)
T 3zwl_B 24 KAIKLTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLG-----------------TLDGHTGTIWSIDV---- 82 (369)
T ss_dssp EEEEEECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEE-----------------EECCCSSCEEEEEE----
T ss_pred ccEEEEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhh-----------------hhhhcCCcEEEEEE----
Confidence 334688999999999999999999999999999999998764321 22346678999987
Q ss_pred cccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC-----CeEEEEEccCCC
Q 023672 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN-----KSVRVFDVHRPG 205 (279)
Q Consensus 132 ~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d-----~~i~~~d~~~~~ 205 (279)
+|++++|++++.|+.|++||+.+++.+..+. +.. .+.+++|+|++++++++ .+ +.|++||+....
T Consensus 83 ---~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~-----~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 83 ---DCFTKYCVTGSADYSIKLWDVSNGQCVATWK-SPV-----PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp ---CTTSSEEEEEETTTEEEEEETTTCCEEEEEE-CSS-----CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred ---cCCCCEEEEEeCCCeEEEEECCCCcEEEEee-cCC-----CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 7789999999999999999999999888887 333 89999999999999966 77 999999998743
Q ss_pred Cceeeeee---cccccCCCCC--ceEEEEEccCCCcEEEEEeCCCcEEEEecCC-CeEEEEEeecCCCEEEEEEccCCCC
Q 023672 206 RDFEKYST---LKGNKEGQAG--IMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 206 ~~~~~~~~---~~~~~~~~~~--~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
........ .......|.. .+.+++|+| ++.+|++++.||.|++||+++ ++.+..+..|...|.+++|+|+|++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 232 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWST-KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTY 232 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECG-GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSE
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcC-CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCE
Confidence 21111100 0111134444 899999999 899999999999999999998 7888999999999999999999863
No 55
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.97 E-value=1.2e-30 Score=209.76 Aligned_cols=220 Identities=11% Similarity=0.035 Sum_probs=149.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEcc--------CCCeEEEeeCCCeEEEEeCCCCccccccccccccCC
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP--------DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKD 106 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--------~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 106 (279)
.+++||..++.... ......+.||.+.|++++|+| |+++||+|+.|++|+|||+.++...
T Consensus 112 ~v~lw~~~~~~~~~-~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~----------- 179 (393)
T 4gq1_A 112 TVRLIITKNETIIT-QHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPI----------- 179 (393)
T ss_dssp CEEEEEEETTEEEE-EEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEE-----------
T ss_pred cEEEEECCCCccce-eeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCcee-----------
Confidence 56788877765432 223447899999999999998 8899999999999999999754321
Q ss_pred CCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccC------------------
Q 023672 107 QDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYD------------------ 168 (279)
Q Consensus 107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~------------------ 168 (279)
.....+..++.+++|+|. +..+|++++.|++|++||+++++.........
T Consensus 180 ------~~~~~~~~~v~~v~~~p~------~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 247 (393)
T 4gq1_A 180 ------LAGYPLSSPGISVQFRPS------NPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNT 247 (393)
T ss_dssp ------EEEEECSSCEEEEEEETT------EEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC--
T ss_pred ------eeecCCCCCcEEEEECCC------CCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceee
Confidence 133456678999988553 23589999999999999999876543332111
Q ss_pred --ccccccceeeEEEC-CCCCEEEEe-cCCeEEEEEccCCCCceeeeeec---------c---cccCCCCCceEEEEEcc
Q 023672 169 --AVDEITAAFSVAFN-PTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTL---------K---GNKEGQAGIMSAIAFSP 232 (279)
Q Consensus 169 --~~~~~~~v~~~~~~-~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~---------~---~~~~~~~~~v~~~~~sp 232 (279)
..++...+.++.|+ |+++.++++ .|+.+++||+..+. ....+... . .....+...+..+.+.+
T Consensus 248 ~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 326 (393)
T 4gq1_A 248 CHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANN-DYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPR 326 (393)
T ss_dssp ----CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCSSCCEECSS
T ss_pred eecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCC-CCceEeeecCccccEEEccccccccccCcceeEEEccC
Confidence 01233367788886 789999866 99999999998632 11111000 0 00011122233333333
Q ss_pred CCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 233 THTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 233 ~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.++.++++|+.||.|++||+.+++++..+..|..+|++++|||||++
T Consensus 327 ~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~ 373 (393)
T 4gq1_A 327 YMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSH 373 (393)
T ss_dssp CTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSE
T ss_pred CCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCE
Confidence 34557788899999999999999998888889999999999999974
No 56
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=2.2e-29 Score=199.71 Aligned_cols=211 Identities=11% Similarity=0.170 Sum_probs=162.9
Q ss_pred eeeEecCCCCc-ccceeeeeeccCCCCCceEEEE------EccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCC
Q 023672 35 PLIRFDVPPHR-TYHFYNQFRTSSIPNNFLKGIK------WSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQ 107 (279)
Q Consensus 35 ~~~~~d~~~~~-~~~~~~~~~~~~~h~~~v~~~~------~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 107 (279)
.+.+||+.++. ... .+.+|.+.|.+++ |+|++++|++++.||.|++||+.++....
T Consensus 91 ~i~iwd~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~----------- 153 (357)
T 3i2n_A 91 NLHIWNLEAPEMPVY------SVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPV----------- 153 (357)
T ss_dssp CEEEECTTSCSSCSE------EECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCS-----------
T ss_pred eEEEEeCCCCCccEE------EEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcc-----------
Confidence 57889988776 433 5778999999995 46899999999999999999998754110
Q ss_pred Ccccceeee---cCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECC-
Q 023672 108 DSYEASLVV---TEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP- 183 (279)
Q Consensus 108 ~~~~~~~~~---~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 183 (279)
..+.. .....+.++.|.+ +++|++.++++++.|+.|++||+++++...... +.. .|.+++|+|
T Consensus 154 ----~~~~~~~~~~~~~v~~~~~~~---~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~-----~v~~~~~~~~ 220 (357)
T 3i2n_A 154 ----ANMEPVQGENKRDCWTVAFGN---AYNQEERVVCAGYDNGDIKLFDLRNMALRWETN-IKN-----GVCSLEFDRK 220 (357)
T ss_dssp ----EEECCCTTSCCCCEEEEEEEC---CCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE-CSS-----CEEEEEESCS
T ss_pred ----eeccccCCCCCCceEEEEEEe---ccCCCCCEEEEEccCCeEEEEECccCceeeecC-CCC-----ceEEEEcCCC
Confidence 01111 1234788888654 468899999999999999999999988755433 333 899999999
Q ss_pred --CCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEecCCC----
Q 023672 184 --TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDNM---- 255 (279)
Q Consensus 184 --~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~~~~---- 255 (279)
++.+++++ .|+.|++||+++. ......... ...+|...|.+++|+| ++. +|++|+.||.|++||++++
T Consensus 221 ~~~~~~l~~~~~dg~i~i~d~~~~-~~~~~~~~~--~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~iwd~~~~~~~~ 296 (357)
T 3i2n_A 221 DISMNKLVATSLEGKFHVFDMRTQ-HPTKGFASV--SEKAHKSTVWQVRHLP-QNRELFLTAGGAGGLHLWKYEYPIQRS 296 (357)
T ss_dssp SSSCCEEEEEESTTEEEEEEEEEE-ETTTEEEEE--EEECCSSCEEEEEEET-TEEEEEEEEETTSEEEEEEEECCSCC-
T ss_pred CCCCCEEEEECCCCeEEEEeCcCC-Ccccceeee--ccCCCcCCEEEEEECC-CCCcEEEEEeCCCcEEEeecCCCcccc
Confidence 88998866 9999999999873 211111100 1147889999999999 776 8999999999999999854
Q ss_pred ---------------eEEEEEeecCCCEEEEEEccCCCC
Q 023672 256 ---------------ELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 256 ---------------~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+++..+.+|..+|++++|+|+|++
T Consensus 297 ~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 335 (357)
T 3i2n_A 297 KKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRG 335 (357)
T ss_dssp -CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTT
T ss_pred cccCCCCccccccccceeeccccCCCCeeEEEEcCCCCe
Confidence 467788999999999999999974
No 57
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=1.1e-28 Score=193.98 Aligned_cols=206 Identities=19% Similarity=0.293 Sum_probs=166.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.+.......... ...+|...|.+++|+|++++|++++.||.|++||+.++.... ...
T Consensus 73 ~i~iw~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~---------------~~~ 136 (337)
T 1gxr_A 73 CVKVWDISHPGNKSPVSQL-DCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRI---------------KAE 136 (337)
T ss_dssp EEEEEETTSTTCCSCSEEE-ECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EE---------------EEE
T ss_pred eEEEEECCCCCceeeeecc-cccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcce---------------eee
Confidence 5778888776544322211 233789999999999999999999999999999998653210 112
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...+...+.+++| +|+++++++++.|+.|++||+++++....+..+.. .+.+++|+|++++++++ .|
T Consensus 137 ~~~~~~~i~~~~~-------~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~~-----~i~~~~~~~~~~~l~~~~~d 204 (337)
T 1gxr_A 137 LTSSAPACYALAI-------SPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHTD-----GASCIDISNDGTKLWTGGLD 204 (337)
T ss_dssp EECSSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS-----CEEEEEECTTSSEEEEEETT
T ss_pred cccCCCceEEEEE-------CCCCCEEEEEeCCCcEEEEeCCCCceeeeeecccC-----ceEEEEECCCCCEEEEEecC
Confidence 3345667888877 67899999999999999999999999888887765 89999999999999966 99
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
+.|++||++++ +....+ .+...+.+++|+| ++.+|++++.|+.|++||+++++.. .+..|...|.+++|
T Consensus 205 g~i~~~d~~~~----~~~~~~-----~~~~~v~~~~~s~-~~~~l~~~~~~~~i~~~~~~~~~~~-~~~~~~~~v~~~~~ 273 (337)
T 1gxr_A 205 NTVRSWDLREG----RQLQQH-----DFTSQIFSLGYCP-TGEWLAVGMESSNVEVLHVNKPDKY-QLHLHESCVLSLKF 273 (337)
T ss_dssp SEEEEEETTTT----EEEEEE-----ECSSCEEEEEECT-TSSEEEEEETTSCEEEEETTSSCEE-EECCCSSCEEEEEE
T ss_pred CcEEEEECCCC----ceEeee-----cCCCceEEEEECC-CCCEEEEEcCCCcEEEEECCCCCeE-EEcCCccceeEEEE
Confidence 99999999874 222222 3567899999999 8999999999999999999988754 67789999999999
Q ss_pred ccCCCC
Q 023672 274 LSSAYT 279 (279)
Q Consensus 274 spdg~~ 279 (279)
+|+|++
T Consensus 274 ~~~~~~ 279 (337)
T 1gxr_A 274 AYCGKW 279 (337)
T ss_dssp CTTSSE
T ss_pred CCCCCE
Confidence 999863
No 58
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.7e-29 Score=201.16 Aligned_cols=200 Identities=15% Similarity=0.244 Sum_probs=163.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.++..... ....|.+.|.+++|+|++++|++|+.||.|++||+.++.... .
T Consensus 114 ~v~lw~~~~~~~~~~-----~~~~~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~-----------------~ 171 (401)
T 4aez_A 114 NVYVWNADSGSVSAL-----AETDESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLR-----------------T 171 (401)
T ss_dssp EEEEEETTTCCEEEE-----EECCTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-----------------E
T ss_pred eEEEeeCCCCcEeEe-----eecCCCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEE-----------------E
Confidence 578888888776542 223388999999999999999999999999999998754321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECC-CCeeeEEEeccCccccccceeeEEECCCCCEEEEe-c
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 192 (279)
...+...|.++.| ++.++++++.|+.|++||++ .+.....+..+.. .|.+++|+|++.+++++ .
T Consensus 172 ~~~~~~~v~~~~~---------~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~s~~~ 237 (401)
T 4aez_A 172 MAGHQARVGCLSW---------NRHVLSSGSRSGAIHHHDVRIANHQIGTLQGHSS-----EVCGLAWRSDGLQLASGGN 237 (401)
T ss_dssp ECCCSSCEEEEEE---------ETTEEEEEETTSEEEEEETTSSSCEEEEEECCSS-----CEEEEEECTTSSEEEEEET
T ss_pred ecCCCCceEEEEE---------CCCEEEEEcCCCCEEEEecccCcceeeEEcCCCC-----CeeEEEEcCCCCEEEEEeC
Confidence 2356678999988 34599999999999999999 4566777777765 89999999999999966 8
Q ss_pred CCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEe--CCCcEEEEecCCCeEEEEEeecCCCEEE
Q 023672 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS--YSQTSAIYREDNMELLYVLHGQEGGVTH 270 (279)
Q Consensus 193 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~--~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 270 (279)
|+.|++||+++. .....+ ..|...|.+++|+|++..++++|+ .|+.|++||+++++++..+. +...|.+
T Consensus 238 d~~v~iwd~~~~----~~~~~~----~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~-~~~~v~~ 308 (401)
T 4aez_A 238 DNVVQIWDARSS----IPKFTK----TNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD-AGSQVTS 308 (401)
T ss_dssp TSCEEEEETTCS----SEEEEE----CCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE-CSSCEEE
T ss_pred CCeEEEccCCCC----CccEEe----cCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe-CCCcEEE
Confidence 999999999973 222233 578889999999995567777765 79999999999999998887 6678999
Q ss_pred EEEccCCCC
Q 023672 271 VSKLSSAYT 279 (279)
Q Consensus 271 ~~~spdg~~ 279 (279)
++|+|+|++
T Consensus 309 ~~~s~~~~~ 317 (401)
T 4aez_A 309 LIWSPHSKE 317 (401)
T ss_dssp EEECSSSSE
T ss_pred EEECCCCCe
Confidence 999999863
No 59
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=4.4e-31 Score=211.25 Aligned_cols=188 Identities=15% Similarity=0.170 Sum_probs=144.8
Q ss_pred CCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC
Q 023672 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (279)
.|.+.|++++|+|++++|++|+.|+.|+|||+.++.... ......|...|.+++| +|+
T Consensus 9 ~~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~---------------~~~~~~h~~~v~~~~~-------s~~ 66 (377)
T 3dwl_C 9 ILPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKH---------------ARTFSDHDKIVTCVDW-------APK 66 (377)
T ss_dssp ECSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEE---------------CCCBCCCSSCEEEEEE-------CTT
T ss_pred cCCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEE---------------EEEEecCCceEEEEEE-------eCC
Confidence 366789999999999999999999999999998652100 0022356778999987 678
Q ss_pred CcEEEEecCCCcEEEEECCCCe---eeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeee
Q 023672 138 SCVFASTTRDHPIHLWDATTGL---LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~ 213 (279)
+++|++++.|+.|++||+.+++ ....+..+.. .|.+++|+|++++|+++ .|+.|++||++.+ ........
T Consensus 67 ~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~-~~~~~~~~ 140 (377)
T 3dwl_C 67 SNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNR-----AATFVRWSPNEDKFAVGSGARVISVCYFEQE-NDWWVSKH 140 (377)
T ss_dssp TCCEEEEETTSSEEEC------CCCCEEECCCCSS-----CEEEEECCTTSSCCEEEESSSCEEECCC------CCCCEE
T ss_pred CCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCC-----ceEEEEECCCCCEEEEEecCCeEEEEEECCc-ccceeeeE
Confidence 8999999999999999999877 4555555554 89999999999999866 9999999999873 22112223
Q ss_pred cccccCC-CCCceEEEEEccCCCcEEEEEeCCCcEEEEecC------------------CCeEEEEEeecCCCEEEEEEc
Q 023672 214 LKGNKEG-QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED------------------NMELLYVLHGQEGGVTHVSKL 274 (279)
Q Consensus 214 ~~~~~~~-~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~------------------~~~~~~~~~~~~~~v~~~~~s 274 (279)
+ .+ |...|.+++|+| ++.+|++++.|+.|++||++ .++++..+ +|...|.+++|+
T Consensus 141 ~----~~~h~~~v~~~~~~~-~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~s 214 (377)
T 3dwl_C 141 L----KRPLRSTILSLDWHP-NNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFS 214 (377)
T ss_dssp E----CSSCCSCEEEEEECT-TSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEEC
T ss_pred e----ecccCCCeEEEEEcC-CCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceEEEEEEC
Confidence 3 34 899999999999 89999999999999999985 35566667 899999999999
Q ss_pred cCCCC
Q 023672 275 SSAYT 279 (279)
Q Consensus 275 pdg~~ 279 (279)
|+|++
T Consensus 215 p~~~~ 219 (377)
T 3dwl_C 215 PSGNA 219 (377)
T ss_dssp TTSSC
T ss_pred CCCCE
Confidence 99974
No 60
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=7.9e-29 Score=194.87 Aligned_cols=200 Identities=13% Similarity=0.144 Sum_probs=164.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.++... ....+.+|...|.+++|+|++++|++++.||.|++||+.++.... .
T Consensus 120 ~i~~~d~~~~~~~----~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~-----------------~ 178 (337)
T 1gxr_A 120 TLSIWDLAAPTPR----IKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVR-----------------Q 178 (337)
T ss_dssp EEEEEECCCC--E----EEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE-----------------E
T ss_pred cEEEEECCCCCcc----eeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceee-----------------e
Confidence 5778888776521 122566799999999999999999999999999999998754321 1
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...+...+.+++| +|++.+|++++.|+.|++||+++++.+..+.... .+.+++|+|++++++++ .+
T Consensus 179 ~~~~~~~i~~~~~-------~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~------~v~~~~~s~~~~~l~~~~~~ 245 (337)
T 1gxr_A 179 FQGHTDGASCIDI-------SNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTS------QIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp ECCCSSCEEEEEE-------CTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS------CEEEEEECTTSSEEEEEETT
T ss_pred eecccCceEEEEE-------CCCCCEEEEEecCCcEEEEECCCCceEeeecCCC------ceEEEEECCCCCEEEEEcCC
Confidence 2235668888877 6789999999999999999999998887775433 78999999999999976 89
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
+.|++||++++. . ..+ ..|...|.+++|+| ++.+|++++.||.|++||+.+++.+... .|...|.+++|
T Consensus 246 ~~i~~~~~~~~~----~-~~~----~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~~~~~~~~~~~~~~-~~~~~v~~~~~ 314 (337)
T 1gxr_A 246 SNVEVLHVNKPD----K-YQL----HLHESCVLSLKFAY-CGKWFVSTGKDNLLNAWRTPYGASIFQS-KESSSVLSCDI 314 (337)
T ss_dssp SCEEEEETTSSC----E-EEE----CCCSSCEEEEEECT-TSSEEEEEETTSEEEEEETTTCCEEEEE-ECSSCEEEEEE
T ss_pred CcEEEEECCCCC----e-EEE----cCCccceeEEEECC-CCCEEEEecCCCcEEEEECCCCeEEEEe-cCCCcEEEEEE
Confidence 999999998731 1 122 57888999999999 8999999999999999999999888554 48889999999
Q ss_pred ccCCCC
Q 023672 274 LSSAYT 279 (279)
Q Consensus 274 spdg~~ 279 (279)
+|||++
T Consensus 315 s~~~~~ 320 (337)
T 1gxr_A 315 SVDDKY 320 (337)
T ss_dssp CTTSCE
T ss_pred CCCCCE
Confidence 999863
No 61
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=2e-29 Score=202.07 Aligned_cols=189 Identities=10% Similarity=0.112 Sum_probs=153.2
Q ss_pred ccCCCCCceEEEEEccCC-CeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceee-ecCCCceEEEEeeCccc
Q 023672 55 TSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV-VTEGESVYDFCWFPHMS 132 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 132 (279)
.+.+|.+.|++++|+|++ ++|++|+.||.|+|||+.++.... .+. ..+...|.+++|+|.
T Consensus 68 ~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~----------------~~~~~~h~~~v~~~~~~~~-- 129 (383)
T 3ei3_B 68 TASPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTS----------------FIQGMGPGDAITGMKFNQF-- 129 (383)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEE----------------EECCCSTTCBEEEEEEETT--
T ss_pred eccCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccce----------------eeecCCcCCceeEEEeCCC--
Confidence 678999999999999999 899999999999999998654321 111 247789999988442
Q ss_pred ccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeee
Q 023672 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~ 211 (279)
++.+|++++.|+.|++||+++ .....+..+.. +...|.+++|+|++++++++ .|+.|++||++. ...
T Consensus 130 ----~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~--~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~-----~~~ 197 (383)
T 3ei3_B 130 ----NTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDS--WDYWYCCVDVSVSRQMLATGDSTGRLLLLGLDG-----HEI 197 (383)
T ss_dssp ----EEEEEEEEETTTEEEEEETTS-CEEEEEECCCC--SSCCEEEEEEETTTTEEEEEETTSEEEEEETTS-----CEE
T ss_pred ----CCCEEEEEeCCCEEEEEECCC-CceEEEeccCC--CCCCeEEEEECCCCCEEEEECCCCCEEEEECCC-----CEE
Confidence 578999999999999999986 44445543331 12279999999999999976 999999999953 233
Q ss_pred eecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEecCC----CeEEEEEeecCCCEEEEEEcc-CCCC
Q 023672 212 STLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDN----MELLYVLHGQEGGVTHVSKLS-SAYT 279 (279)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~~~----~~~~~~~~~~~~~v~~~~~sp-dg~~ 279 (279)
..+ .+|...|.+++|+| ++. +|++|+.|+.|++||+++ +.++..+ +|...|.+++|+| +|++
T Consensus 198 ~~~----~~h~~~v~~~~~~~-~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~~ 265 (383)
T 3ei3_B 198 FKE----KLHKAKVTHAEFNP-RCDWLMATSSVDATVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDSTK 265 (383)
T ss_dssp EEE----ECSSSCEEEEEECS-SCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSCE
T ss_pred EEe----ccCCCcEEEEEECC-CCCCEEEEEeCCCEEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCCE
Confidence 333 57889999999999 676 999999999999999998 6677666 6999999999999 8863
No 62
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-30 Score=215.24 Aligned_cols=185 Identities=11% Similarity=0.060 Sum_probs=141.6
Q ss_pred eeeEecCCCCccc-----ceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCc
Q 023672 35 PLIRFDVPPHRTY-----HFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDS 109 (279)
Q Consensus 35 ~~~~~d~~~~~~~-----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 109 (279)
.+++||+...... ........+.+|.+.|++++|++++ .|++|+.||+|++||++++...
T Consensus 236 tvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~-------------- 300 (524)
T 2j04_B 236 TINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVP-------------- 300 (524)
T ss_dssp CEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSC--------------
T ss_pred eEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCc--------------
Confidence 5678888765432 1112223577899999999999864 8999999999999999854210
Q ss_pred ccceeeecCCCceEEEEeeCcccccCCCC-cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEE
Q 023672 110 YEASLVVTEGESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKI 188 (279)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 188 (279)
......|...|.++++ ++++++ .+|++|+.|++|+|||+++++....+..+... ..|.+++|+|++..+
T Consensus 301 --~~~~~~H~~~V~sv~~-----~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~---~~v~~v~fsp~~~~l 370 (524)
T 2j04_B 301 --SFYDQVHDSYILSVST-----AYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG---SNLVPVVYCPQIYSY 370 (524)
T ss_dssp --SEEEECSSSCEEEEEE-----ECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC---CSCCCEEEETTTTEE
T ss_pred --eEEeecccccEEEEEE-----EcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc---CcccceEeCCCcCeE
Confidence 1123457788999853 346777 89999999999999999998877666554321 147889999999888
Q ss_pred EEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC
Q 023672 189 FAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (279)
Q Consensus 189 ~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~ 253 (279)
+++ .|+.|++||++++ . +...+ .+|.+.|++++|+| ++.+|++|+.||+|++||+.
T Consensus 371 ~s~~~d~tv~lwd~~~~-~---~~~~l----~gH~~~V~sva~Sp-~g~~l~Sgs~Dgtv~lwd~~ 427 (524)
T 2j04_B 371 IYSDGASSLRAVPSRAA-F---AVHPL----VSRETTITAIGVSR-LHPMVLAGSADGSLIITNAA 427 (524)
T ss_dssp EEECSSSEEEEEETTCT-T---CCEEE----EECSSCEEEEECCS-SCCBCEEEETTTEEECCBSC
T ss_pred EEeCCCCcEEEEECccc-c---cceee----ecCCCceEEEEeCC-CCCeEEEEECCCEEEEEech
Confidence 866 8999999999974 2 22233 57899999999999 89999999999999999853
No 63
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.7e-29 Score=201.79 Aligned_cols=191 Identities=17% Similarity=0.271 Sum_probs=154.4
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|.+.|++++|+|++++|++|+.||.|+|||+...... .......|...|.+++|+|.
T Consensus 6 ~~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~---------------~~~~~~~h~~~v~~~~~~~~---- 66 (379)
T 3jrp_A 6 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK---------------LIDTLTGHEGPVWRVDWAHP---- 66 (379)
T ss_dssp CEEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEE---------------EEEEECCCSSCEEEEEECCG----
T ss_pred EecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcce---------------eeeEecCCCCcEEEEEeCCC----
Confidence 67889999999999999999999999999999999742110 00123356778999988331
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCe--eeEEEeccCccccccceeeEEECCC--CCEEEEe-cCCeEEEEEccCCCCcee
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRDFE 209 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~-~d~~i~~~d~~~~~~~~~ 209 (279)
.++.+|++++.|+.|++||+.+++ ....+..+.. .|.+++|+|+ +.+++++ .|+.|++||++..... .
T Consensus 67 -~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~-~ 139 (379)
T 3jrp_A 67 -KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA-----SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-S 139 (379)
T ss_dssp -GGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCC-C
T ss_pred -CCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCc-----ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCce-e
Confidence 238899999999999999999987 5556655554 8999999999 8888866 9999999999874221 1
Q ss_pred eeeecccccCCCCCceEEEEEccC------------CCcEEEEEeCCCcEEEEecCCCe----EEEEEeecCCCEEEEEE
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPT------------HTGMLAIGSYSQTSAIYREDNME----LLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~------------~~~~l~~~~~dg~i~~wd~~~~~----~~~~~~~~~~~v~~~~~ 273 (279)
.. .+ .+|...|.+++|+|. ++.+|++|+.||.|++||++++. ++..+.+|...|.+++|
T Consensus 140 ~~-~~----~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~ 214 (379)
T 3jrp_A 140 PI-II----DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 214 (379)
T ss_dssp EE-EE----ECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred eE-Ee----cCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcEeEEEE
Confidence 11 22 578889999999994 48899999999999999998764 55678889999999999
Q ss_pred ccC
Q 023672 274 LSS 276 (279)
Q Consensus 274 spd 276 (279)
+|+
T Consensus 215 sp~ 217 (379)
T 3jrp_A 215 SPT 217 (379)
T ss_dssp CCC
T ss_pred CCC
Confidence 999
No 64
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2.4e-29 Score=202.45 Aligned_cols=209 Identities=12% Similarity=0.151 Sum_probs=162.4
Q ss_pred eeeEecCCCCcccceeeeeeccCCC-----CCceEEEEEc----cCCCe-EEEeeCCCeEEEEeCCC------Ccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIP-----NNFLKGIKWS----PDGSS-FLTSSEDKTLRIFSLPE------NGISYDV 98 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~----~~~~~-l~t~~~dg~i~iwd~~~------~~~~~~~ 98 (279)
.+.+||+.+...... .....+.+| .+.|.+++|+ |++++ |++++.||.|++||+.+ +....-.
T Consensus 92 ~i~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~ 170 (397)
T 1sq9_A 92 DLLFYRITREDETKK-VIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWS 170 (397)
T ss_dssp CEEEEEEEECTTTCC-EEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCC
T ss_pred CEEEEEccCCccccc-ccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeecc
Confidence 567777766654100 002256667 5899999999 99999 99999999999999986 3221100
Q ss_pred ccccccCCCCcccceee------ecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEec---c--
Q 023672 99 NACSLAKDQDSYEASLV------VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRA---Y-- 167 (279)
Q Consensus 99 ~~~~~~~~~~~~~~~~~------~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~---~-- 167 (279)
....+. ..+...|.+++| +|++ +|++++.|+.|++||+++++.+..+.. +
T Consensus 171 -----------~~~~~~~~~~~~~~~~~~i~~~~~-------~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~h~~ 231 (397)
T 1sq9_A 171 -----------PTLELQGTVESPMTPSQFATSVDI-------SERG-LIATGFNNGTVQISELSTLRPLYNFESQHSMIN 231 (397)
T ss_dssp -----------CEEEEEEEECCSSSSCCCCCEEEE-------CTTS-EEEEECTTSEEEEEETTTTEEEEEEECCC---C
T ss_pred -----------CcceeeeeeccccCCCCCceEEEE-------CCCc-eEEEEeCCCcEEEEECCCCceeEEEeccccccc
Confidence 000111 235667888877 6788 999999999999999999999988887 5
Q ss_pred -CccccccceeeEEECCCCCEEEEe-cC---CeEEEEEccCCCCceeeeeecccccCC-------------CCCceEEEE
Q 023672 168 -DAVDEITAAFSVAFNPTGTKIFAG-YN---KSVRVFDVHRPGRDFEKYSTLKGNKEG-------------QAGIMSAIA 229 (279)
Q Consensus 168 -~~~~~~~~v~~~~~~~~~~~l~~~-~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~-------------~~~~v~~~~ 229 (279)
.. .|.+++|+|++++|+++ .| +.|++||++++ . ....+ .+ |...|.+++
T Consensus 232 ~~~-----~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~-~---~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 232 NSN-----SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFG-E---RIGSL----SVPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp CCC-----CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTC-C---EEEEE----CBC--------CCBSBSSCEEEEE
T ss_pred cCC-----ccceEEECCCCCEEEEEecCCCCceEEEEECCCC-c---cccee----ccCcccccccccccccCCcEEEEE
Confidence 44 89999999999999966 88 99999999874 2 22233 34 888999999
Q ss_pred EccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe------ec---------------CCCEEEEEEccCC
Q 023672 230 FSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH------GQ---------------EGGVTHVSKLSSA 277 (279)
Q Consensus 230 ~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~------~~---------------~~~v~~~~~spdg 277 (279)
|+| ++.+|++++.||.|++||+++++++..+. .| ..+|++++|+|+|
T Consensus 299 ~~~-~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g 366 (397)
T 1sq9_A 299 FND-SGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKG 366 (397)
T ss_dssp ECS-SSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTT
T ss_pred ECC-CCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEecccc
Confidence 999 89999999999999999999999999999 88 8999999999998
No 65
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=2.1e-28 Score=191.06 Aligned_cols=219 Identities=15% Similarity=0.276 Sum_probs=158.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccc-----------
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSL----------- 103 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~----------- 103 (279)
.+++||+.+++....+ ...+|...|++++|+|++++|++|+.||+|++||+++++..........
T Consensus 46 tV~iWd~~tg~~~~~~----~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~ 121 (318)
T 4ggc_A 46 SVYLWSASSGDILQLL----QMEQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYI 121 (318)
T ss_dssp EEEEEETTTCCEEEEE----ECCSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTE
T ss_pred EEEEEECCCCCEEEEE----EecCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCE
Confidence 5889999998876532 3567889999999999999999999999999999998765322211000
Q ss_pred -c-CCCC-----------cccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeee----EEEec
Q 023672 104 -A-KDQD-----------SYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR----CTYRA 166 (279)
Q Consensus 104 -~-~~~~-----------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~----~~~~~ 166 (279)
. ...+ .........+...+..+. +++++.++++++.|+.|++||+++++.. .....
T Consensus 122 l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 194 (318)
T 4ggc_A 122 LSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLR-------WAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ 194 (318)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEE-------ECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECC
T ss_pred EEEEecCCceEeeecCCCceeEEEEcCccCceEEEE-------EcCCCCEEEEEecCcceeEEECCCCcccccceeeecc
Confidence 0 0000 000111122333444444 4788999999999999999999987532 22222
Q ss_pred cCccccccceeeEEECCCCCEEE---Ee-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEE-
Q 023672 167 YDAVDEITAAFSVAFNPTGTKIF---AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG- 241 (279)
Q Consensus 167 ~~~~~~~~~v~~~~~~~~~~~l~---~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~- 241 (279)
+.. .|.++.++|++..++ ++ .++.|++||.+.. . .... ..+...+..+.|+| .+..++++
T Consensus 195 ~~~-----~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~-~---~~~~-----~~~~~~v~~~~~~~-~~~~~~~~s 259 (318)
T 4ggc_A 195 HQG-----AVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSG-A---CLSA-----VDAHSQVCSILWSP-HYKELISGH 259 (318)
T ss_dssp CCS-----CEEEEEECTTSTTEEEEEECTTTCEEEEEETTTC-C---EEEE-----EECSSCEEEEEEET-TTTEEEEEE
T ss_pred cCC-----ceEEEEecCCCCcEEEEEecCCCCEEEEEecccc-c---cccc-----ccceeeeeeeeecc-cccceEEEE
Confidence 332 788999999865443 44 7899999999873 1 1111 24566799999999 66666554
Q ss_pred -eCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 242 -SYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 242 -~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+.|+.|++||+++++++.++.+|.+.|++++|+|||++
T Consensus 260 g~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~ 298 (318)
T 4ggc_A 260 GFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGAT 298 (318)
T ss_dssp CTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSC
T ss_pred EcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCE
Confidence 47999999999999999999999999999999999975
No 66
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.97 E-value=9.3e-30 Score=207.93 Aligned_cols=203 Identities=16% Similarity=0.239 Sum_probs=149.7
Q ss_pred CCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcc-cceeeecCC------------CceE
Q 023672 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSY-EASLVVTEG------------ESVY 123 (279)
Q Consensus 57 ~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~------------~~v~ 123 (279)
..|.+.|++++|+|++++||+|+.||.|+|||+.++....... ...+ .......|. ..|.
T Consensus 25 ~~~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~-------~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~ 97 (447)
T 3dw8_B 25 VAEADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHS-------RGEYNVYSTFQSHEPEFDYLKSLEIEEKIN 97 (447)
T ss_dssp CCGGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCC-------CCCEEEEEEEECCCCEEEGGGTEEECCCCC
T ss_pred ccccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCccc-------ccceeEecccccccccccccccccccCceE
Confidence 3467899999999999999999999999999998754210000 0000 011222344 6788
Q ss_pred EEEeeCcccccCCCC--cEEEEecCCCcEEEEECCCCeeeE---------------------------------------
Q 023672 124 DFCWFPHMSASDPTS--CVFASTTRDHPIHLWDATTGLLRC--------------------------------------- 162 (279)
Q Consensus 124 ~~~~~~~~~~~~~~~--~~l~s~~~d~~i~i~d~~~~~~~~--------------------------------------- 162 (279)
+++| +|++ ..|++++.|+.|++||+.++....
T Consensus 98 ~l~~-------~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (447)
T 3dw8_B 98 KIRW-------LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRR 170 (447)
T ss_dssp EEEE-------CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEE
T ss_pred EEEE-------cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceE
Confidence 8888 5565 789999999999999998654321
Q ss_pred EE-eccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCC-cEEEE
Q 023672 163 TY-RAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT-GMLAI 240 (279)
Q Consensus 163 ~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~~l~~ 240 (279)
.+ ..| ...|.+++|+|++++|+++.|+.|++||+++.+..............+|...|.+++|+| ++ .+|++
T Consensus 171 ~~~~~h-----~~~v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p-~~~~~l~s 244 (447)
T 3dw8_B 171 IFANAH-----TYHINSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHP-NSCNTFVY 244 (447)
T ss_dssp EECSCC-----SSCCCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECS-SCTTEEEE
T ss_pred EeccCC-----CcceEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECC-CCCcEEEE
Confidence 11 223 338999999999999997799999999998533222222111123468899999999999 66 99999
Q ss_pred EeCCCcEEEEecCCCeE----EEEEeecCC------------CEEEEEEccCCCC
Q 023672 241 GSYSQTSAIYREDNMEL----LYVLHGQEG------------GVTHVSKLSSAYT 279 (279)
Q Consensus 241 ~~~dg~i~~wd~~~~~~----~~~~~~~~~------------~v~~~~~spdg~~ 279 (279)
|+.||.|++||+++++. +..+..|.. .|.+++|+|+|++
T Consensus 245 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~ 299 (447)
T 3dw8_B 245 SSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRY 299 (447)
T ss_dssp EETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSE
T ss_pred EeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCE
Confidence 99999999999999887 788888876 8999999999974
No 67
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.97 E-value=4e-29 Score=201.69 Aligned_cols=211 Identities=12% Similarity=0.201 Sum_probs=163.6
Q ss_pred eeeEecCCCCccccee-eeeeccCCCCCceEEEEEccCC-CeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFY-NQFRTSSIPNNFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+.+||+.++...... .....+.+|.+.|.+++|+|++ ++|++++.||.|++||+.++.....
T Consensus 105 ~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~--------------- 169 (402)
T 2aq5_A 105 TVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLT--------------- 169 (402)
T ss_dssp EEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEE---------------
T ss_pred eEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEE---------------
Confidence 5788998877432211 2233677899999999999998 6999999999999999987643211
Q ss_pred eee-ecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEE-eccCccccccceeeEEECCCCCEEEE
Q 023672 113 SLV-VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTY-RAYDAVDEITAAFSVAFNPTGTKIFA 190 (279)
Q Consensus 113 ~~~-~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~ 190 (279)
+. ..+...|.+++| +|++.+|++++.|+.|++||+++++.+..+ ..+.. ..+.++.|+|++.++++
T Consensus 170 -~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~ 237 (402)
T 2aq5_A 170 -LGPDVHPDTIYSVDW-------SRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEG----TRPVHAVFVSEGKILTT 237 (402)
T ss_dssp -ECTTTCCSCEEEEEE-------CTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCS----SSCCEEEECSTTEEEEE
T ss_pred -EecCCCCCceEEEEE-------CCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCC----CcceEEEEcCCCcEEEE
Confidence 11 346678999988 678999999999999999999999988887 45543 13789999999999986
Q ss_pred e----cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEE-EEeCCCcEEEEecCCCeE-EEEEeec
Q 023672 191 G----YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA-IGSYSQTSAIYREDNMEL-LYVLHGQ 264 (279)
Q Consensus 191 ~----~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~-~~~~dg~i~~wd~~~~~~-~~~~~~~ 264 (279)
| .|+.|++||+++...+.... . ..|...+.+++|+| ++.+|+ +|+.||.|++||+.++++ +..+..|
T Consensus 238 g~~~~~d~~i~iwd~~~~~~~~~~~-~-----~~~~~~v~~~~~s~-~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~ 310 (402)
T 2aq5_A 238 GFSRMSERQVALWDTKHLEEPLSLQ-E-----LDTSSGVLLPFFDP-DTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMF 310 (402)
T ss_dssp EECTTCCEEEEEEETTBCSSCSEEE-E-----CCCCSSCEEEEEET-TTTEEEEEETTCSCEEEEEECSSTTCEEEEEEE
T ss_pred eccCCCCceEEEEcCccccCCceEE-e-----ccCCCceeEEEEcC-CCCEEEEEEcCCCeEEEEEecCCCcceEeeccc
Confidence 5 78999999998743322221 1 24567799999999 777775 666899999999999874 5555554
Q ss_pred --CCCEEEEEEccCCCC
Q 023672 265 --EGGVTHVSKLSSAYT 279 (279)
Q Consensus 265 --~~~v~~~~~spdg~~ 279 (279)
..+|.+++|+|+|++
T Consensus 311 ~~~~~v~~~~~sp~~~~ 327 (402)
T 2aq5_A 311 SSKESQRGMGYMPKRGL 327 (402)
T ss_dssp CCSSCCSEEEECCGGGS
T ss_pred ccCCcccceEEeccccc
Confidence 589999999999864
No 68
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.97 E-value=4.3e-29 Score=200.14 Aligned_cols=206 Identities=12% Similarity=0.101 Sum_probs=160.6
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||+.+...... ....+|.+.|.+++|+| ++++|++++.|+.|++||+.+.... .
T Consensus 97 ~i~iwd~~~~~~~~~----~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-----------------~ 155 (383)
T 3ei3_B 97 DIILWDYDVQNKTSF----IQGMGPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSVIQ-----------------V 155 (383)
T ss_dssp CEEEEETTSTTCEEE----ECCCSTTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCEEE-----------------E
T ss_pred eEEEEeCCCccccee----eecCCcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCceE-----------------E
Confidence 567888876665431 13357999999999999 7899999999999999999853211 0
Q ss_pred ee--ecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCC-EEEE
Q 023672 114 LV--VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFA 190 (279)
Q Consensus 114 ~~--~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~ 190 (279)
+. ..+...|.+++| +|++.+|++++.|+.|++||+ +++.+..+..+.. .|.+++|+|++. ++++
T Consensus 156 ~~~~~~~~~~v~~~~~-------~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~-----~v~~~~~~~~~~~~l~s 222 (383)
T 3ei3_B 156 FAKTDSWDYWYCCVDV-------SVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA-----KVTHAEFNPRCDWLMAT 222 (383)
T ss_dssp EECCCCSSCCEEEEEE-------ETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSS-----CEEEEEECSSCTTEEEE
T ss_pred EeccCCCCCCeEEEEE-------CCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC-----cEEEEEECCCCCCEEEE
Confidence 11 123357888887 668899999999999999999 5777788877765 899999999998 7776
Q ss_pred e-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC----
Q 023672 191 G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE---- 265 (279)
Q Consensus 191 ~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~---- 265 (279)
+ .|+.|++||+++..........+ +|...|.+++|+|.++.+|++++.|+.|++||+++++.+..+..|.
T Consensus 223 ~~~d~~i~iwd~~~~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 223 SSVDATVKLWDLRNIKDKNSYIAEM-----PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EETTSEEEEEEGGGCCSTTCEEEEE-----ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEEEECCBCCC
T ss_pred EeCCCEEEEEeCCCCCcccceEEEe-----cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccccccccccc
Confidence 5 99999999999743222333332 5788999999999667899999999999999999988777776553
Q ss_pred -------------CCEEEEEEccCCCC
Q 023672 266 -------------GGVTHVSKLSSAYT 279 (279)
Q Consensus 266 -------------~~v~~~~~spdg~~ 279 (279)
+.+..++|+|||++
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~ 324 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL 324 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT
T ss_pred ccccceEEeccCCCCceEEEecCCccc
Confidence 35566888888864
No 69
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=4.3e-28 Score=191.02 Aligned_cols=223 Identities=17% Similarity=0.208 Sum_probs=163.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccc-------------
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC------------- 101 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~------------- 101 (279)
.+++||+.+..... ......+.+|.+.|.+++|+|++++|++++.|+.|++|+.............
T Consensus 62 ~i~vWd~~~~~~~~-~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (340)
T 4aow_A 62 TIIMWKLTRDETNY-GIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDN 140 (340)
T ss_dssp CEEEEEECCSSSCS-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTS
T ss_pred eEEEEECCCCCccc-ceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecC
Confidence 57888887665432 1233467899999999999999999999999999999999876542111000
Q ss_pred --cccCCCCccc-----------ceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccC
Q 023672 102 --SLAKDQDSYE-----------ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYD 168 (279)
Q Consensus 102 --~~~~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~ 168 (279)
......++.+ ......+...+..+.|.+ .+...++++++.|+.|++||+++++.+..+..+.
T Consensus 141 ~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~-----~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~ 215 (340)
T 4aow_A 141 RQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSP-----NSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT 215 (340)
T ss_dssp SCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECS-----CSSSCEEEEEETTSCEEEEETTTTEEEEEECCCS
T ss_pred ccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEcc-----CCCCcEEEEEcCCCEEEEEECCCCceeeEecCCC
Confidence 0000011110 011123345566666633 3445678999999999999999999999888877
Q ss_pred ccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcE
Q 023672 169 AVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTS 247 (279)
Q Consensus 169 ~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i 247 (279)
. .|.+++|+|++++|+++ .|+.|++||+++. .....+ .+...+.+++|+| ++.+ ++++.|+.|
T Consensus 216 ~-----~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~----~~~~~~-----~~~~~v~~~~~~~-~~~~-~~~~~d~~i 279 (340)
T 4aow_A 216 G-----YLNTVTVSPDGSLCASGGKDGQAMLWDLNEG----KHLYTL-----DGGDIINALCFSP-NRYW-LCAATGPSI 279 (340)
T ss_dssp S-----CEEEEEECTTSSEEEEEETTCEEEEEETTTT----EEEEEE-----ECSSCEEEEEECS-SSSE-EEEEETTEE
T ss_pred C-----cEEEEEECCCCCEEEEEeCCCeEEEEEeccC----ceeeee-----cCCceEEeeecCC-CCce-eeccCCCEE
Confidence 6 89999999999999966 9999999999974 333333 2345799999999 7654 556679999
Q ss_pred EEEecCCCeEEEEEe---------ecCCCEEEEEEccCCCC
Q 023672 248 AIYREDNMELLYVLH---------GQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 248 ~~wd~~~~~~~~~~~---------~~~~~v~~~~~spdg~~ 279 (279)
++||++++..+..+. +|...|++++|+|||++
T Consensus 280 ~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~ 320 (340)
T 4aow_A 280 KIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQT 320 (340)
T ss_dssp EEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSE
T ss_pred EEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCE
Confidence 999999887766553 57889999999999974
No 70
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=7e-30 Score=208.11 Aligned_cols=191 Identities=14% Similarity=0.167 Sum_probs=145.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||+.+..... ...+.+|.+.|++|+|+| ++++|++|+.||+|++||++++....
T Consensus 143 ~i~lWd~~~~~~~~----~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~----------------- 201 (435)
T 4e54_B 143 DIMLWNFGIKDKPT----FIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRV----------------- 201 (435)
T ss_dssp CEEEECSSCCSCCE----EECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEE-----------------
T ss_pred EEEEEECCCCCcee----EEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeE-----------------
Confidence 56778876655322 225678999999999998 78899999999999999997542210
Q ss_pred eeecC--CCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCC-EEEE
Q 023672 114 LVVTE--GESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFA 190 (279)
Q Consensus 114 ~~~~~--~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~ 190 (279)
+...+ ...+.++.| +|++.+|++|+.||.|++||++. +.+..+..|.. .|.+++|+|++. ++++
T Consensus 202 ~~~~~~~~~~~~~~~~-------~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~~-----~v~~v~~~p~~~~~~~s 268 (435)
T 4e54_B 202 FASSDTINIWFCSLDV-------SASSRMVVTGDNVGNVILLNMDG-KELWNLRMHKK-----KVTHVALNPCCDWFLAT 268 (435)
T ss_dssp EECCSSCSCCCCCEEE-------ETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCSS-----CEEEEEECTTCSSEEEE
T ss_pred EeccCCCCccEEEEEE-------CCCCCEEEEEeCCCcEeeeccCc-ceeEEEecccc-----eEEeeeecCCCceEEEE
Confidence 11111 123445544 77899999999999999999864 45556666655 899999999986 5555
Q ss_pred e-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC
Q 023672 191 G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265 (279)
Q Consensus 191 ~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 265 (279)
+ .|+.|++||+++.... ..+.. ..+|...|.+++|+| ++.+|++++.||.|+|||++++++...+..|.
T Consensus 269 ~s~d~~v~iwd~~~~~~~-~~~~~----~~~h~~~v~~~~~sp-dg~~l~s~~~D~~i~iwd~~~~~~~~~~~~~~ 338 (435)
T 4e54_B 269 ASVDQTVKIWDLRQVRGK-ASFLY----SLPHRHPVNAACFSP-DGARLLTTDQKSEIRVYSASQWDCPLGLIPHP 338 (435)
T ss_dssp EETTSBCCEEETTTCCSS-SCCSB----CCBCSSCEEECCBCT-TSSEEEEEESSSCEEEEESSSSSSEEEECCCC
T ss_pred ecCcceeeEEeccccccc-ceEEE----eeeccccccceeECC-CCCeeEEEcCCCEEEEEECCCCccceEEeccc
Confidence 5 8999999999874221 11111 157899999999999 89999999999999999999998877776554
No 71
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.97 E-value=1.2e-28 Score=199.75 Aligned_cols=202 Identities=10% Similarity=0.103 Sum_probs=159.6
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||..+..... .+..| ..+....|+|++++|++|+.||.|++||+.++.... .
T Consensus 79 ~v~i~d~~~~~~~~------~~~~~-~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~-----------------~ 134 (420)
T 3vl1_A 79 HDFLFNTIIRDGSK------MLKRA-DYTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQRE-----------------I 134 (420)
T ss_dssp EEEEEECCSEETTT------TSCSC-CEEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEE-----------------E
T ss_pred cEEEEEecccceee------EEecC-CceEEEEEecCCCEEEEEECCCCEEEEeCCCcceee-----------------e
Confidence 56778877766544 44455 445566789999999999999999999998653311 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...|...|.+++| +|++.+|++++.|+.|++||+++++.+..+..|.. .|.+++|+|++++|+++ .|
T Consensus 135 ~~~h~~~v~~~~~-------~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~s~~~d 202 (420)
T 3vl1_A 135 DQAHVSEITKLKF-------FPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHRA-----TVTDIAIIDRGRNVLSASLD 202 (420)
T ss_dssp TTSSSSCEEEEEE-------CTTSSEEEEEETTSEEEEEETTTCCCCEEEECCSS-----CEEEEEEETTTTEEEEEETT
T ss_pred cccccCccEEEEE-------CCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCC-----cEEEEEEcCCCCEEEEEcCC
Confidence 2356778999988 67899999999999999999999999888887776 89999999999999966 99
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCC---------------------CceEEEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQA---------------------GIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~---------------------~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
+.|++||++++ + ....+... ..+. ..+.+++|+| ++.+|++|+.||.|++||+
T Consensus 203 ~~v~iwd~~~~-~---~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 203 GTIRLWECGTG-T---TIHTFNRK-ENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGT-YGKYVIAGHVSGVITVHNV 276 (420)
T ss_dssp SCEEEEETTTT-E---EEEEECBT-TBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSC-TTEEEEEEETTSCEEEEET
T ss_pred CcEEEeECCCC-c---eeEEeecC-CCCCCCccEEEEecCCcceeeecccCcccceEEcC-CCCEEEEEcCCCeEEEEEC
Confidence 99999999974 2 22222111 2233 3445555678 8899999999999999999
Q ss_pred CCCeEEEEEee-cCCCEEEEEEccCCC
Q 023672 253 DNMELLYVLHG-QEGGVTHVSKLSSAY 278 (279)
Q Consensus 253 ~~~~~~~~~~~-~~~~v~~~~~spdg~ 278 (279)
++++.+..+.. |...|.+++|+|+|+
T Consensus 277 ~~~~~~~~~~~~~~~~v~~~~~~~~~~ 303 (420)
T 3vl1_A 277 FSKEQTIQLPSKFTCSCNSLTVDGNNA 303 (420)
T ss_dssp TTCCEEEEECCTTSSCEEEEEECSSCT
T ss_pred CCCceeEEcccccCCCceeEEEeCCCC
Confidence 99988777754 788999999999986
No 72
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=8.3e-29 Score=200.67 Aligned_cols=216 Identities=10% Similarity=0.153 Sum_probs=166.4
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCcccccccccccc----------
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLA---------- 104 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~---------- 104 (279)
.+.+|| .++.... .+.+|...|.+++|+|++++|++++.||.|++||+.++............
T Consensus 131 ~i~i~~-~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (425)
T 1r5m_A 131 ELRLWN-KTGALLN------VLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHS 203 (425)
T ss_dssp CEEEEE-TTSCEEE------EECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-------------
T ss_pred eEEEEe-CCCCeee------eccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeecccc
Confidence 466777 3333332 57789999999999999999999999999999999877543221111000
Q ss_pred -------------------CCCCc----------ccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEEC
Q 023672 105 -------------------KDQDS----------YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDA 155 (279)
Q Consensus 105 -------------------~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~ 155 (279)
...+. ........+...|.+++| +|++.+|++++.|+.|++||+
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~-------~~~~~~l~~~~~d~~i~i~d~ 276 (425)
T 1r5m_A 204 GDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEF-------NDTNKLLLSASDDGTLRIWHG 276 (425)
T ss_dssp --CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEE-------ETTTTEEEEEETTSCEEEECS
T ss_pred CCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEE-------CCCCCEEEEEcCCCEEEEEEC
Confidence 00000 001112234456666666 678889999999999999999
Q ss_pred CCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCC
Q 023672 156 TTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH 234 (279)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~ 234 (279)
++++....+..+.. .|.+++|+|++ .++++ .|+.|++||++++ .....+ ..|...|.+++|+| +
T Consensus 277 ~~~~~~~~~~~~~~-----~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~----~~~~~~----~~~~~~i~~~~~s~-~ 341 (425)
T 1r5m_A 277 GNGNSQNCFYGHSQ-----SIVSASWVGDD-KVISCSMDGSVRLWSLKQN----TLLALS----IVDGVPIFAGRISQ-D 341 (425)
T ss_dssp SSBSCSEEECCCSS-----CEEEEEEETTT-EEEEEETTSEEEEEETTTT----EEEEEE----ECTTCCEEEEEECT-T
T ss_pred CCCccceEecCCCc-----cEEEEEECCCC-EEEEEeCCCcEEEEECCCC----cEeEec----ccCCccEEEEEEcC-C
Confidence 99998888877665 89999999999 66655 9999999999874 333333 56788999999999 8
Q ss_pred CcEEEEEeCCCcEEEEecCCCe--------------------EEEEEeecCC--CEEEEEEccCCCC
Q 023672 235 TGMLAIGSYSQTSAIYREDNME--------------------LLYVLHGQEG--GVTHVSKLSSAYT 279 (279)
Q Consensus 235 ~~~l~~~~~dg~i~~wd~~~~~--------------------~~~~~~~~~~--~v~~~~~spdg~~ 279 (279)
+.+|++++.||.|++||+++++ ++..+..|.. .|++++|+|+|++
T Consensus 342 ~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 408 (425)
T 1r5m_A 342 GQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNK 408 (425)
T ss_dssp SSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTSSE
T ss_pred CCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCCce
Confidence 9999999999999999999888 8899999976 9999999999973
No 73
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=1.2e-29 Score=201.83 Aligned_cols=215 Identities=15% Similarity=0.158 Sum_probs=163.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||+.+++... .+.+|.+.|.+++|+| ++++|++|+.||.|++||+.++.......
T Consensus 96 ~i~v~d~~~~~~~~------~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-------------- 155 (366)
T 3k26_A 96 IIRIINPITMQCIK------HYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFG-------------- 155 (366)
T ss_dssp EEEEECTTTCCEEE------EEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEEC--------------
T ss_pred EEEEEEchhceEee------eecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEec--------------
Confidence 67889988877654 5678999999999999 89999999999999999998764321110
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEecc-----------------------Ccc
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAY-----------------------DAV 170 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~-----------------------~~~ 170 (279)
....+...|.+++| +|++.+|++++.|+.|++||+++++....+... ...
T Consensus 156 ~~~~~~~~v~~~~~-------~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (366)
T 3k26_A 156 GVEGHRDEVLSADY-------DLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRD 228 (366)
T ss_dssp STTSCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECS
T ss_pred ccccccCceeEEEE-------CCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCcccccc
Confidence 00246678999987 678999999999999999999987654333220 000
Q ss_pred ccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeee------eecccccCCCCCceEEEEEccCC--CcEEEEE
Q 023672 171 DEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKY------STLKGNKEGQAGIMSAIAFSPTH--TGMLAIG 241 (279)
Q Consensus 171 ~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~------~~~~~~~~~~~~~v~~~~~sp~~--~~~l~~~ 241 (279)
.+...|.+++|+ +++++++ .|+.|++||+++........ ......+..|...|.+++|+| + +.+|++|
T Consensus 229 ~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~-~~~~~~l~~~ 305 (366)
T 3k26_A 229 IHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM-DFWQKMLALG 305 (366)
T ss_dssp SCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE-CTTSSEEEEE
T ss_pred CCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC-CCCCcEEEEE
Confidence 022389999998 6677765 99999999998743211100 011122267888999999999 7 9999999
Q ss_pred eCCCcEEEEecCCCe----EEEEEeec--CCCEEEEEEccCCCC
Q 023672 242 SYSQTSAIYREDNME----LLYVLHGQ--EGGVTHVSKLSSAYT 279 (279)
Q Consensus 242 ~~dg~i~~wd~~~~~----~~~~~~~~--~~~v~~~~~spdg~~ 279 (279)
+.||.|++||+.+++ ....+..| ...|++++|+|+|++
T Consensus 306 ~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 349 (366)
T 3k26_A 306 NQVGKLYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSSI 349 (366)
T ss_dssp CTTSCEEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSSE
T ss_pred ecCCcEEEEECCCCCCccccceEEcccccCCceEEEEeCCCCCe
Confidence 999999999999875 44578877 689999999999874
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=3.1e-28 Score=196.35 Aligned_cols=217 Identities=18% Similarity=0.280 Sum_probs=170.3
Q ss_pred eeeEecCCCCcccceeeeee-------ccCCCCCceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCC
Q 023672 35 PLIRFDVPPHRTYHFYNQFR-------TSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKD 106 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~-------~~~~h~~~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~ 106 (279)
.+.+||+.+........... ...+|.+.|.+++|+| ++++|++++.||.|++||+.++...
T Consensus 67 ~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~----------- 135 (408)
T 4a11_B 67 VIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTA----------- 135 (408)
T ss_dssp CEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEE-----------
T ss_pred eEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccc-----------
Confidence 57788888776654332111 2246999999999999 7789999999999999999875432
Q ss_pred CCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCC
Q 023672 107 QDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT 186 (279)
Q Consensus 107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 186 (279)
........+..+.|.|. ++++.++++++.|+.|++||+++++.+..+..+.. .|.+++|+|++.
T Consensus 136 -------~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-----~v~~~~~~~~~~ 199 (408)
T 4a11_B 136 -------DVFNFEETVYSHHMSPV----STKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ-----EILAVSWSPRYD 199 (408)
T ss_dssp -------EEEECSSCEEEEEECSS----CSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS-----CEEEEEECSSCT
T ss_pred -------eeccCCCceeeeEeecC----CCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC-----cEEEEEECCCCC
Confidence 22335567888888654 56777999999999999999999998888887765 899999999998
Q ss_pred E-EEEe-cCCeEEEEEccCCCCceeee--------eecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCC-
Q 023672 187 K-IFAG-YNKSVRVFDVHRPGRDFEKY--------STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM- 255 (279)
Q Consensus 187 ~-l~~~-~d~~i~~~d~~~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~- 255 (279)
. ++++ .|+.|++||+++........ ........+|...|.+++|+| ++.+|++++.||.|++||++++
T Consensus 200 ~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~~~dg~i~vwd~~~~~ 278 (408)
T 4a11_B 200 YILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTS-DGLHLLTVGTDNRMRLWNSSNGE 278 (408)
T ss_dssp TEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECT-TSSEEEEEETTSCEEEEETTTCC
T ss_pred cEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcC-CCCEEEEecCCCeEEEEECCCCc
Confidence 4 6655 99999999998753222222 112222357889999999999 8999999999999999998653
Q ss_pred ----------------------------------------------eEEEEEeecCCCEEEEEEccCCCC
Q 023672 256 ----------------------------------------------ELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 256 ----------------------------------------------~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+++..+.+|...|++++|+|+|++
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 348 (408)
T 4a11_B 279 NTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQE 348 (408)
T ss_dssp BCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTE
T ss_pred cceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCE
Confidence 456677889999999999999863
No 75
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3e-28 Score=197.35 Aligned_cols=186 Identities=12% Similarity=0.204 Sum_probs=150.4
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
|.+.|++++|+|++++|++|+.||.|++||.. +... .....+...|.+++| +|++
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~~~-~~~~-----------------~~~~~~~~~v~~~~~-------~~~~ 161 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWNKT-GALL-----------------NVLNFHRAPIVSVKW-------NKDG 161 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEE-----------------EEECCCCSCEEEEEE-------CTTS
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEeCC-CCee-----------------eeccCCCccEEEEEE-------CCCC
Confidence 78899999999999999999999999999943 2211 122346678888887 6788
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCcc------------------------------------------------
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAV------------------------------------------------ 170 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~------------------------------------------------ 170 (279)
.+|++++.|+.|++||+.+++.+..+..+...
T Consensus 162 ~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~ 241 (425)
T 1r5m_A 162 THIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTG 241 (425)
T ss_dssp SEEEEEETTCCEEEEETTTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSE
T ss_pred CEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceee
Confidence 89999999999999999888776655433221
Q ss_pred ---ccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCc
Q 023672 171 ---DEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT 246 (279)
Q Consensus 171 ---~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~ 246 (279)
.+...|.+++|+|++++++++ .|+.|++||+++. . ....+ .+|...|.+++|+| ++ +|++++.|+.
T Consensus 242 ~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~-~---~~~~~----~~~~~~i~~~~~~~-~~-~l~~~~~d~~ 311 (425)
T 1r5m_A 242 KLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG-N---SQNCF----YGHSQSIVSASWVG-DD-KVISCSMDGS 311 (425)
T ss_dssp EECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB-S---CSEEE----CCCSSCEEEEEEET-TT-EEEEEETTSE
T ss_pred eeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC-c---cceEe----cCCCccEEEEEECC-CC-EEEEEeCCCc
Confidence 223478899999999999866 8999999999873 2 22222 57888999999999 77 9999999999
Q ss_pred EEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 247 SAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 247 i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
|++||+++++++..+..|..+|.+++|+|+|++
T Consensus 312 i~i~d~~~~~~~~~~~~~~~~i~~~~~s~~~~~ 344 (425)
T 1r5m_A 312 VRLWSLKQNTLLALSIVDGVPIFAGRISQDGQK 344 (425)
T ss_dssp EEEEETTTTEEEEEEECTTCCEEEEEECTTSSE
T ss_pred EEEEECCCCcEeEecccCCccEEEEEEcCCCCE
Confidence 999999999999999999999999999999863
No 76
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2e-29 Score=202.85 Aligned_cols=215 Identities=16% Similarity=0.125 Sum_probs=164.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccC----C---CeEEEeeCCCeEEEEeCCCCccccccccccccCCC
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD----G---SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQ 107 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~---~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 107 (279)
.+++||+.+............+.+|...|.+++|+|+ + ++|++++.||.|++||+.++.....
T Consensus 37 ~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~---------- 106 (397)
T 1sq9_A 37 YLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKK---------- 106 (397)
T ss_dssp EEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCC----------
T ss_pred EEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCccccc----------
Confidence 6788999887732222233366789999999999999 9 9999999999999999986542100
Q ss_pred CcccceeeecC-----CCceEEEEeeCcccccCCCCcE-EEEecCCCcEEEEECCC------CeeeE-----EEec----
Q 023672 108 DSYEASLVVTE-----GESVYDFCWFPHMSASDPTSCV-FASTTRDHPIHLWDATT------GLLRC-----TYRA---- 166 (279)
Q Consensus 108 ~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~i~d~~~------~~~~~-----~~~~---- 166 (279)
........+ ...|.+++|++.. .|++.+ |++++.|+.|++||+++ ++.+. .+..
T Consensus 107 --~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (397)
T 1sq9_A 107 --VIFEKLDLLDSDMKKHSFWALKWGASN---DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVES 181 (397)
T ss_dssp --EEEEEECCSCTTGGGSCEEEEEEECCC-------CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECC
T ss_pred --ccceeecccccccCCCcEEEEEEeecc---CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeecc
Confidence 000112223 4789999884210 067889 99999999999999998 66555 5532
Q ss_pred ---cCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCC---C---CCceEEEEEccCCCc
Q 023672 167 ---YDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEG---Q---AGIMSAIAFSPTHTG 236 (279)
Q Consensus 167 ---~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~---~---~~~v~~~~~sp~~~~ 236 (279)
+.. .|.+++|+|++ +++++ .|+.|++||+++. +....+ .. | ...|.+++|+| ++.
T Consensus 182 ~~~~~~-----~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~----~~~~~~----~~~~~h~~~~~~i~~i~~~~-~~~ 246 (397)
T 1sq9_A 182 PMTPSQ-----FATSVDISERG-LIATGFNNGTVQISELSTL----RPLYNF----ESQHSMINNSNSIRSVKFSP-QGS 246 (397)
T ss_dssp SSSSCC-----CCCEEEECTTS-EEEEECTTSEEEEEETTTT----EEEEEE----ECCC---CCCCCEEEEEECS-STT
T ss_pred ccCCCC-----CceEEEECCCc-eEEEEeCCCcEEEEECCCC----ceeEEE----eccccccccCCccceEEECC-CCC
Confidence 333 78999999999 88866 9999999999873 233333 34 7 88999999999 899
Q ss_pred EEEEEeCC---CcEEEEecCCCeEEEEEee-------------cCCCEEEEEEccCCCC
Q 023672 237 MLAIGSYS---QTSAIYREDNMELLYVLHG-------------QEGGVTHVSKLSSAYT 279 (279)
Q Consensus 237 ~l~~~~~d---g~i~~wd~~~~~~~~~~~~-------------~~~~v~~~~~spdg~~ 279 (279)
+|++++.| |.|++||+++++++..+.. |...|.+++|+|+|++
T Consensus 247 ~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 305 (397)
T 1sq9_A 247 LLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGET 305 (397)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSSE
T ss_pred EEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCCE
Confidence 99999999 9999999999999999998 9999999999999864
No 77
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.97 E-value=1e-28 Score=196.89 Aligned_cols=190 Identities=16% Similarity=0.229 Sum_probs=155.2
Q ss_pred CCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCC
Q 023672 57 SIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (279)
Q Consensus 57 ~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (279)
..|.+.|++++|+|++++|++++.|+.|++||+.++... .......|...|.+++| +|
T Consensus 5 ~~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~---------------~~~~~~~h~~~v~~~~~-------~~ 62 (372)
T 1k8k_C 5 SFLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWV---------------QVHELKEHNGQVTGVDW-------AP 62 (372)
T ss_dssp ESCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEE---------------EEEEEECCSSCEEEEEE-------ET
T ss_pred cccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEE---------------eeeeecCCCCcccEEEE-------eC
Confidence 448899999999999999999999999999999865310 00123356778999988 56
Q ss_pred CCcEEEEecCCCcEEEEECCCCeeeEEEe--ccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeee
Q 023672 137 TSCVFASTTRDHPIHLWDATTGLLRCTYR--AYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (279)
Q Consensus 137 ~~~~l~s~~~d~~i~i~d~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~ 213 (279)
++.+|++++.|+.|++||+.+++....+. .+.. .|.+++|+|++++++++ .|+.|++||++.. ........
T Consensus 63 ~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~-~~~~~~~~ 136 (372)
T 1k8k_C 63 DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINR-----AARCVRWAPNEKKFAVGSGSRVISICYFEQE-NDWWVCKH 136 (372)
T ss_dssp TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSS-----CEEEEEECTTSSEEEEEETTSSEEEEEEETT-TTEEEEEE
T ss_pred CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCC-----ceeEEEECCCCCEEEEEeCCCEEEEEEecCC-Ccceeeee
Confidence 78999999999999999999887655543 2333 89999999999999966 8999999999974 22222222
Q ss_pred cccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEec------------------CCCeEEEEEeecCCCEEEEEEcc
Q 023672 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE------------------DNMELLYVLHGQEGGVTHVSKLS 275 (279)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~------------------~~~~~~~~~~~~~~~v~~~~~sp 275 (279)
+ ..+|...|.+++|+| ++.+|++++.||.|++||+ .+++++..+..|...|.+++|+|
T Consensus 137 ~---~~~~~~~i~~~~~~~-~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 212 (372)
T 1k8k_C 137 I---KKPIRSTVLSLDWHP-NSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSA 212 (372)
T ss_dssp E---CTTCCSCEEEEEECT-TSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECS
T ss_pred e---ecccCCCeeEEEEcC-CCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECC
Confidence 2 157788999999999 8999999999999999995 46788889989999999999999
Q ss_pred CCC
Q 023672 276 SAY 278 (279)
Q Consensus 276 dg~ 278 (279)
+|+
T Consensus 213 ~~~ 215 (372)
T 1k8k_C 213 NGS 215 (372)
T ss_dssp SSS
T ss_pred CCC
Confidence 986
No 78
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=6.5e-29 Score=218.09 Aligned_cols=189 Identities=10% Similarity=0.063 Sum_probs=154.5
Q ss_pred cCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccC
Q 023672 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (279)
Q Consensus 56 ~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (279)
..+|.+.|++++|+|++++||+|+.||+|+||+..+.... ....+...|.+++| +
T Consensus 13 ~~gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~------------------~~~~~~~~V~~l~f-------s 67 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVV------------------IKLEDRSAIKEMRF-------V 67 (902)
T ss_dssp EEECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEE------------------EECSSCCCEEEEEE-------E
T ss_pred ccCCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEE------------------EEcCCCCCEEEEEE-------c
Confidence 4589999999999999999999999999999998754221 22335668999988 5
Q ss_pred CCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeee-
Q 023672 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST- 213 (279)
Q Consensus 136 ~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~- 213 (279)
| +++|++++.|++|++||+++++.+..+..+ . .|++++|+|+++++++| .||.|++||+++. ... ....
T Consensus 68 p-g~~L~S~s~D~~v~lWd~~~~~~~~~~~~~-~-----~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~-~~~-~~~i~ 138 (902)
T 2oaj_A 68 K-GIYLVVINAKDTVYVLSLYSQKVLTTVFVP-G-----KITSIDTDASLDWMLIGLQNGSMIVYDIDRD-QLS-SFKLD 138 (902)
T ss_dssp T-TTEEEEEETTCEEEEEETTTCSEEEEEECS-S-----CEEEEECCTTCSEEEEEETTSCEEEEETTTT-EEE-EEEEC
T ss_pred C-CCEEEEEECcCeEEEEECCCCcEEEEEcCC-C-----CEEEEEECCCCCEEEEEcCCCcEEEEECCCC-ccc-cceec
Confidence 5 669999999999999999999988887633 2 89999999999999977 9999999999873 211 1100
Q ss_pred -cc---cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec------------------CCCEEEE
Q 023672 214 -LK---GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ------------------EGGVTHV 271 (279)
Q Consensus 214 -~~---~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~------------------~~~v~~~ 271 (279)
.. ....+|...|.+++|+|+++..|++|+.||.| +||+++++++..+..| ...|+++
T Consensus 139 ~~~~~~~~~~~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v 217 (902)
T 2oaj_A 139 NLQKSSFFPAARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQS 217 (902)
T ss_dssp CHHHHHTCSSSCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEE
T ss_pred cccccccccccCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEE
Confidence 00 23368899999999999556799999999999 9999999999888766 4679999
Q ss_pred EEccCCCC
Q 023672 272 SKLSSAYT 279 (279)
Q Consensus 272 ~~spdg~~ 279 (279)
+|+|||++
T Consensus 218 ~fspdg~~ 225 (902)
T 2oaj_A 218 LYHPNSLH 225 (902)
T ss_dssp EECTTSSE
T ss_pred EEcCCCCE
Confidence 99999963
No 79
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.97 E-value=4.1e-28 Score=188.90 Aligned_cols=215 Identities=15% Similarity=0.166 Sum_probs=159.4
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccc-------------
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC------------- 101 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~------------- 101 (279)
.+++||+.+..... .+..|.+.|.+++|+|++++|++++.||.|++|++............
T Consensus 40 ~v~vw~~~~~~~~~------~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 113 (313)
T 3odt_A 40 TVRLWSKDDQWLGT------VVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQ 113 (313)
T ss_dssp EEEEEEESSSEEEE------EEEECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEE
T ss_pred cEEEEECCCCEEEE------EeecCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEec
Confidence 57888887766544 56678999999999999999999999999999998764321110000
Q ss_pred ---cccCCCCccc--------ceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEec-cCc
Q 023672 102 ---SLAKDQDSYE--------ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRA-YDA 169 (279)
Q Consensus 102 ---~~~~~~~~~~--------~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~-~~~ 169 (279)
......+..+ ......+...+.++.|.| +++..+++++.|+.|++|| .++....+.. +..
T Consensus 114 ~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~------~~~~~l~~~~~d~~i~i~d--~~~~~~~~~~~~~~ 185 (313)
T 3odt_A 114 DGVVISGSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVS------FSENKFLTASADKTIKLWQ--NDKVIKTFSGIHND 185 (313)
T ss_dssp TTEEEEEETTSEEEEEETTEEEEEEECCSSCEEEEEEEE------TTTTEEEEEETTSCEEEEE--TTEEEEEECSSCSS
T ss_pred CCEEEEEeCCCCEEEEcCCcEEEecccCCCceeEEEEcc------CCCCEEEEEECCCCEEEEe--cCceEEEEeccCcc
Confidence 0000000000 011123444555555532 2788999999999999999 4555666655 443
Q ss_pred cccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEE
Q 023672 170 VDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI 249 (279)
Q Consensus 170 ~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~ 249 (279)
.+.+++|+|++.+++++.|+.|++||++++ +....+ .+|...|.+++|+| ++ .|++++.||.|++
T Consensus 186 -----~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~----~~~~~~----~~~~~~i~~~~~~~-~~-~l~~~~~dg~v~i 250 (313)
T 3odt_A 186 -----VVRHLAVVDDGHFISCSNDGLIKLVDMHTG----DVLRTY----EGHESFVYCIKLLP-NG-DIVSCGEDRTVRI 250 (313)
T ss_dssp -----CEEEEEEEETTEEEEEETTSEEEEEETTTC----CEEEEE----ECCSSCEEEEEECT-TS-CEEEEETTSEEEE
T ss_pred -----cEEEEEEcCCCeEEEccCCCeEEEEECCch----hhhhhh----hcCCceEEEEEEec-CC-CEEEEecCCEEEE
Confidence 899999999998443559999999999974 233333 57889999999999 77 6889999999999
Q ss_pred EecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 250 YREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 250 wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
||+++++++..+..|...|.+++|+|+|+
T Consensus 251 wd~~~~~~~~~~~~~~~~i~~~~~~~~~~ 279 (313)
T 3odt_A 251 WSKENGSLKQVITLPAISIWSVDCMSNGD 279 (313)
T ss_dssp ECTTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred EECCCCceeEEEeccCceEEEEEEccCCC
Confidence 99999999999999999999999999986
No 80
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.5e-28 Score=214.88 Aligned_cols=218 Identities=14% Similarity=0.197 Sum_probs=168.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCcccccccc-------cccc---
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA-------CSLA--- 104 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-------~~~~--- 104 (279)
.+.+||+.++.... .+.+|.+.|.+++|+|++++|++|+.||.|++||+.++........ ....
T Consensus 36 ~v~iwd~~~~~~~~------~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~ 109 (814)
T 3mkq_A 36 RVEIWNYETQVEVR------SIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTK 109 (814)
T ss_dssp EEEEEETTTTEEEE------EEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSS
T ss_pred EEEEEECCCCceEE------EEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCC
Confidence 57889988877655 5668999999999999999999999999999999988765321110 0000
Q ss_pred -----CCCCccc-----------ceeeecCCCceEEEEeeCcccccCC-CCcEEEEecCCCcEEEEECCCCeeeEEEecc
Q 023672 105 -----KDQDSYE-----------ASLVVTEGESVYDFCWFPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAY 167 (279)
Q Consensus 105 -----~~~~~~~-----------~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~ 167 (279)
...+..+ ......+...|.+++| +| ++..|++++.|+.|++||+.++.....+..+
T Consensus 110 ~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~-------~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~ 182 (814)
T 3mkq_A 110 PYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAF-------NPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTG 182 (814)
T ss_dssp SEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEE-------ETTEEEEEEEEETTSEEEEEETTCSSCSEEEECC
T ss_pred CEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEE-------EcCCCCEEEEEeCCCeEEEEECCCCcceeEEecC
Confidence 0011111 1111223344555555 66 7789999999999999999888777776654
Q ss_pred CccccccceeeEEECC--CCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC
Q 023672 168 DAVDEITAAFSVAFNP--TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS 244 (279)
Q Consensus 168 ~~~~~~~~v~~~~~~~--~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d 244 (279)
.. ..+.+++|+| ++.+++++ .|+.|++||++++ .....+ .+|...|.+++|+| ++.+|++++.|
T Consensus 183 ~~----~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~~----~~~~~~----~~~~~~v~~~~~~~-~~~~l~~~~~d 249 (814)
T 3mkq_A 183 QE----RGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTK----SCVATL----EGHMSNVSFAVFHP-TLPIIISGSED 249 (814)
T ss_dssp CT----TCCCEEEECCSTTCCEEEEECTTSEEEEEETTTT----EEEEEE----ECCSSCEEEEEECS-SSSEEEEEETT
T ss_pred CC----CCEEEEEEEECCCCCEEEEEeCCCEEEEEECCCC----cEEEEE----cCCCCCEEEEEEcC-CCCEEEEEeCC
Confidence 41 2788999999 89999876 9999999999874 333333 57888999999999 89999999999
Q ss_pred CcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 245 QTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 245 g~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
|.|++||+.+++.+..+..|...+.+++|+|+|+
T Consensus 250 g~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~ 283 (814)
T 3mkq_A 250 GTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGR 283 (814)
T ss_dssp SCEEEEETTTCSEEEEECCSSSSEEEEEECTTCG
T ss_pred CeEEEEECCCCcEEEEeecCCCcEEEEEEccCCC
Confidence 9999999999999999999999999999999985
No 81
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.97 E-value=9.1e-29 Score=196.11 Aligned_cols=214 Identities=12% Similarity=0.113 Sum_probs=166.2
Q ss_pred eeeeeEecCCCCcccceeeeeeccCCCCCceEEEEEccC---CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCc
Q 023672 33 TWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD---GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDS 109 (279)
Q Consensus 33 ~~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~---~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 109 (279)
.-.+.+||+.+++.... ...+|.+.|.+++|+|+ +++|++|+.||.|++||+.++...
T Consensus 43 d~~v~iw~~~~~~~~~~-----~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~-------------- 103 (357)
T 3i2n_A 43 TGVIQLYEIQHGDLKLL-----REIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMP-------------- 103 (357)
T ss_dssp CEEEEEEEECSSSEEEE-----EEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSC--------------
T ss_pred CcEEEEEeCCCCcccce-----eeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCcc--------------
Confidence 34678899887765432 23368999999999998 699999999999999999865410
Q ss_pred ccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCe-eeEEEeccCccccccceeeEE----ECCC
Q 023672 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVA----FNPT 184 (279)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~~~----~~~~ 184 (279)
......|...|.++.|.+. ++++|++.+|++++.|+.|++||+++++ ....+..+.... ...+.+++ |+|+
T Consensus 104 --~~~~~~~~~~v~~~~~~~~-~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~-~~~v~~~~~~~~~~~~ 179 (357)
T 3i2n_A 104 --VYSVKGHKEIINAIDGIGG-LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGEN-KRDCWTVAFGNAYNQE 179 (357)
T ss_dssp --SEEECCCSSCEEEEEEESG-GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSC-CCCEEEEEEECCCC-C
T ss_pred --EEEEEecccceEEEeeccc-cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCC-CCceEEEEEEeccCCC
Confidence 1123457778999998764 4679999999999999999999999886 666665543211 22677887 7889
Q ss_pred CCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccC--CCcEEEEEeCCCcEEEEecCCCeEEEEE
Q 023672 185 GTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT--HTGMLAIGSYSQTSAIYREDNMELLYVL 261 (279)
Q Consensus 185 ~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 261 (279)
+++++++ .|+.|++||++++ ..... ..|...|.+++|+|. ++.+|++++.||.|++||+++++++..+
T Consensus 180 ~~~l~~~~~d~~i~i~d~~~~----~~~~~-----~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~ 250 (357)
T 3i2n_A 180 ERVVCAGYDNGDIKLFDLRNM----ALRWE-----TNIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGF 250 (357)
T ss_dssp CCEEEEEETTSEEEEEETTTT----EEEEE-----EECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEE
T ss_pred CCEEEEEccCCeEEEEECccC----ceeee-----cCCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccce
Confidence 9999976 8999999999974 22111 366788999999994 4678999999999999999987765444
Q ss_pred e-----ecCCCEEEEEEccCCC
Q 023672 262 H-----GQEGGVTHVSKLSSAY 278 (279)
Q Consensus 262 ~-----~~~~~v~~~~~spdg~ 278 (279)
. +|...|++++|+|+|+
T Consensus 251 ~~~~~~~~~~~v~~~~~~~~~~ 272 (357)
T 3i2n_A 251 ASVSEKAHKSTVWQVRHLPQNR 272 (357)
T ss_dssp EEEEEECCSSCEEEEEEETTEE
T ss_pred eeeccCCCcCCEEEEEECCCCC
Confidence 4 8999999999999985
No 82
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=5.9e-28 Score=198.30 Aligned_cols=196 Identities=17% Similarity=0.241 Sum_probs=159.7
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.+++... .+.+|.+.|.+++|+|++ +|++|+.||+|++||+.++.... .
T Consensus 143 ~i~vwd~~~~~~~~------~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~-----------------~ 198 (464)
T 3v7d_B 143 MIRVYDSINKKFLL------QLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTH-----------------V 198 (464)
T ss_dssp CEEEEETTTTEEEE------EECCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEE-----------------E
T ss_pred cEEEEECCCCcEEE------EEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEE-----------------E
Confidence 46778887776554 677999999999999988 89999999999999998764321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeee-----------------------EEEeccCccc
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR-----------------------CTYRAYDAVD 171 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~-----------------------~~~~~~~~~~ 171 (279)
...|...|.++.|.+ .+++.++++++.|+.|++||++++... ..+..+..
T Consensus 199 ~~~h~~~v~~l~~~~-----~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 271 (464)
T 3v7d_B 199 FEGHNSTVRCLDIVE-----YKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMA-- 271 (464)
T ss_dssp ECCCSSCEEEEEEEE-----SSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSS--
T ss_pred ECCCCCccEEEEEec-----CCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccc--
Confidence 334677899998854 467889999999999999999887533 22333332
Q ss_pred cccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEE
Q 023672 172 EITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (279)
Q Consensus 172 ~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~w 250 (279)
.+.++ ++++.+++++ .|+.|++||++++ +....+ .+|...|.+++|+| ++.+|++|+.||.|++|
T Consensus 272 ---~v~~~--~~~~~~l~~~~~d~~i~vwd~~~~----~~~~~~----~~~~~~v~~~~~~~-~~~~l~sg~~dg~i~vw 337 (464)
T 3v7d_B 272 ---SVRTV--SGHGNIVVSGSYDNTLIVWDVAQM----KCLYIL----SGHTDRIYSTIYDH-ERKRCISASMDTTIRIW 337 (464)
T ss_dssp ---CEEEE--EEETTEEEEEETTSCEEEEETTTT----EEEEEE----CCCSSCEEEEEEET-TTTEEEEEETTSCEEEE
T ss_pred ---eEEEE--cCCCCEEEEEeCCCeEEEEECCCC----cEEEEe----cCCCCCEEEEEEcC-CCCEEEEEeCCCcEEEE
Confidence 55554 6778888866 9999999999874 333344 68899999999999 89999999999999999
Q ss_pred ecCCCeEEEEEeecCCCEEEEEEcc
Q 023672 251 REDNMELLYVLHGQEGGVTHVSKLS 275 (279)
Q Consensus 251 d~~~~~~~~~~~~~~~~v~~~~~sp 275 (279)
|+++++++..+.+|...|.+++|++
T Consensus 338 d~~~~~~~~~~~~h~~~v~~~~~~~ 362 (464)
T 3v7d_B 338 DLENGELMYTLQGHTALVGLLRLSD 362 (464)
T ss_dssp ETTTTEEEEEECCCSSCEEEEEECS
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcC
Confidence 9999999999999999999999985
No 83
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=6.9e-28 Score=194.37 Aligned_cols=199 Identities=15% Similarity=0.253 Sum_probs=160.0
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.+++... .+.+|.+.|.+++| ++++|++|+.||.|++||+...... ...
T Consensus 157 ~i~iwd~~~~~~~~------~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~i~d~~~~~~~----------------~~~ 212 (401)
T 4aez_A 157 LVDIYDVESQTKLR------TMAGHQARVGCLSW--NRHVLSSGSRSGAIHHHDVRIANHQ----------------IGT 212 (401)
T ss_dssp CEEEEETTTCCEEE------EECCCSSCEEEEEE--ETTEEEEEETTSEEEEEETTSSSCE----------------EEE
T ss_pred eEEEEECcCCeEEE------EecCCCCceEEEEE--CCCEEEEEcCCCCEEEEecccCcce----------------eeE
Confidence 56788888776654 56789999999999 4679999999999999999843210 113
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee--
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-- 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-- 191 (279)
...+...|.++.| +|++.+|++++.|+.|++||+++++....+..+.. .|.+++|+|++..++ ++
T Consensus 213 ~~~~~~~v~~~~~-------~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~-----~v~~~~~~p~~~~ll~~~~g 280 (401)
T 4aez_A 213 LQGHSSEVCGLAW-------RSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA-----AVKAVAWCPWQSNLLATGGG 280 (401)
T ss_dssp EECCSSCEEEEEE-------CTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS-----CCCEEEECTTSTTEEEEECC
T ss_pred EcCCCCCeeEEEE-------cCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc-----eEEEEEECCCCCCEEEEecC
Confidence 3456778999987 67899999999999999999999998888877765 899999999875444 43
Q ss_pred -cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEE--EeCCCcEEEEecCCCeEE--EEEeecCC
Q 023672 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAI--GSYSQTSAIYREDNMELL--YVLHGQEG 266 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~--~~~dg~i~~wd~~~~~~~--~~~~~~~~ 266 (279)
.|+.|++||++++ . ....+ .+...|.+++|+| ++.+|++ |+.||.|++||+.+++.. ..+.+|..
T Consensus 281 s~d~~i~i~d~~~~-~---~~~~~-----~~~~~v~~~~~s~-~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~ 350 (401)
T 4aez_A 281 TMDKQIHFWNAATG-A---RVNTV-----DAGSQVTSLIWSP-HSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDT 350 (401)
T ss_dssp TTTCEEEEEETTTC-C---EEEEE-----ECSSCEEEEEECS-SSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSS
T ss_pred CCCCEEEEEECCCC-C---EEEEE-----eCCCcEEEEEECC-CCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCC
Confidence 5999999999974 2 22233 3456799999999 8888888 558999999999997654 45778999
Q ss_pred CEEEEEEccCCCC
Q 023672 267 GVTHVSKLSSAYT 279 (279)
Q Consensus 267 ~v~~~~~spdg~~ 279 (279)
.|.+++|+|||++
T Consensus 351 ~v~~~~~s~dg~~ 363 (401)
T 4aez_A 351 RVLYSALSPDGRI 363 (401)
T ss_dssp CCCEEEECTTSSE
T ss_pred CEEEEEECCCCCE
Confidence 9999999999963
No 84
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.97 E-value=2.6e-28 Score=196.85 Aligned_cols=200 Identities=18% Similarity=0.296 Sum_probs=154.3
Q ss_pred ccCCCCCceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 55 TSSIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
.+.+|.+.|++++|+| ++++|++|+.||.|++||+.++............. ........+...|.+++|+|.
T Consensus 38 ~~~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~~~~~~~--- 110 (408)
T 4a11_B 38 VERIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCS----IGRDHPDVHRYSVETVQWYPH--- 110 (408)
T ss_dssp ECCCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEE----ECTTCTTCCSSCEEEEEECTT---
T ss_pred eeeccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEecccccc----ccccccccCCCcEEEEEEccC---
Confidence 6778999999999999 99999999999999999999765432211000000 000001236778999988432
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCC---CEEEEe-cCCeEEEEEccCCCCcee
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG---TKIFAG-YNKSVRVFDVHRPGRDFE 209 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---~~l~~~-~d~~i~~~d~~~~~~~~~ 209 (279)
++.+|++++.|+.|++||+.+++....+.... .+.++.|+|.+ .+++++ .|+.|++||++++ .
T Consensus 111 ---~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~-~--- 177 (408)
T 4a11_B 111 ---DTGMFTSSSFDKTLKVWDTNTLQTADVFNFEE------TVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSG-S--- 177 (408)
T ss_dssp ---CTTCEEEEETTSEEEEEETTTTEEEEEEECSS------CEEEEEECSSCSSCCEEEEEESSSSEEEEESSSS-C---
T ss_pred ---CCcEEEEEeCCCeEEEeeCCCCccceeccCCC------ceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCc-c---
Confidence 67799999999999999999999888877443 78899999854 477766 9999999999874 2
Q ss_pred eeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEecCCCe-EEEEE---------------eecCCCEEEEE
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDNME-LLYVL---------------HGQEGGVTHVS 272 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~~~~~-~~~~~---------------~~~~~~v~~~~ 272 (279)
....+ .+|...|.+++|+| ++. +|++|+.||.|++||++++. ++..+ ..|...|.+++
T Consensus 178 ~~~~~----~~~~~~v~~~~~~~-~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 252 (408)
T 4a11_B 178 CSHIL----QGHRQEILAVSWSP-RYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLC 252 (408)
T ss_dssp CCEEE----CCCCSCEEEEEECS-SCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEE
T ss_pred eeeee----cCCCCcEEEEEECC-CCCcEEEEEcCCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEE
Confidence 22233 57889999999999 665 69999999999999998875 44554 56888999999
Q ss_pred EccCCCC
Q 023672 273 KLSSAYT 279 (279)
Q Consensus 273 ~spdg~~ 279 (279)
|+|+|++
T Consensus 253 ~~~~~~~ 259 (408)
T 4a11_B 253 FTSDGLH 259 (408)
T ss_dssp ECTTSSE
T ss_pred EcCCCCE
Confidence 9999863
No 85
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=6.6e-28 Score=219.44 Aligned_cols=209 Identities=16% Similarity=0.168 Sum_probs=172.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||..++.... .+.+|.+.|.+++|+|++++|++|+.||+|+|||+.++.... .
T Consensus 638 ~i~vw~~~~~~~~~------~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~~~~-----------------~ 694 (1249)
T 3sfz_A 638 TLQVFKAETGEKLL------DIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGKLVH-----------------T 694 (1249)
T ss_dssp CEEEEETTTCCEEE------EECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEE-----------------E
T ss_pred eEEEEECCCCCEEE------EeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCceEE-----------------E
Confidence 46788888777654 677999999999999999999999999999999998764321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...|...|.++.|+|. .++.++++|+.|+.|++||+++++....+..|.. .|.+++|+|++++++++ .|
T Consensus 695 ~~~~~~~v~~~~~~~~-----~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~-----~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 695 YDEHSEQVNCCHFTNK-----SNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN-----SVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp EECCSSCEEEEEECSS-----SSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS-----CEEEEEECSSTTEEEEEESS
T ss_pred EcCCCCcEEEEEEecC-----CCceEEEEEeCCCeEEEEECCCcchhheecCCCC-----CEEEEEEecCCCEEEEEECC
Confidence 3356778999988542 2566899999999999999999999998888776 89999999999999966 99
Q ss_pred CeEEEEEccCCCCceeeee------------------------------------------------ecccccCCCCCce
Q 023672 194 KSVRVFDVHRPGRDFEKYS------------------------------------------------TLKGNKEGQAGIM 225 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~------------------------------------------------~~~~~~~~~~~~v 225 (279)
+.|++||++++. ...... .......+|...+
T Consensus 765 g~v~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v 843 (1249)
T 3sfz_A 765 GTLRLWDVRSAN-ERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHHSTI 843 (1249)
T ss_dssp SEEEEEEGGGTE-EEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSSSCC
T ss_pred CeEEEEeCCCCc-ccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCCCce
Confidence 999999998631 111100 0000113778899
Q ss_pred EEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 226 SAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 226 ~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
.+++|+| ++.++++++.||.|++||+.++..+..+.+|.+.|.+++|+|+|+
T Consensus 844 ~~~~~sp-~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~ 895 (1249)
T 3sfz_A 844 QYCDFSP-YDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDGS 895 (1249)
T ss_dssp CEEEECS-STTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEEcC-CCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCCC
Confidence 9999999 899999999999999999999999999999999999999999986
No 86
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.97 E-value=5.3e-29 Score=215.57 Aligned_cols=209 Identities=18% Similarity=0.220 Sum_probs=163.1
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccC--CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD--GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+.+||+..... .....+.+|.+.|++++|+|+ +++|++|+.||.|++||+.++.... .
T Consensus 32 ~I~vwd~~~~~~----~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~~---------------~ 92 (753)
T 3jro_A 32 TIKIFEVEGETH----KLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWSQ---------------I 92 (753)
T ss_dssp EEEEEEEETTEE----EEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEEE---------------E
T ss_pred cEEEEecCCCCC----ccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCcccc---------------c
Confidence 567787663221 223367899999999999987 9999999999999999998653110 0
Q ss_pred eeeecCCCceEEEEeeCcccccCCC--CcEEEEecCCCcEEEEECCCCee--eEEEeccCccccccceeeEEECC-----
Q 023672 113 SLVVTEGESVYDFCWFPHMSASDPT--SCVFASTTRDHPIHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNP----- 183 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~----- 183 (279)
.....+...|.++.| +|+ +..+++|+.||.|++||++++.. ...+..+.. .|.+++|+|
T Consensus 93 ~~~~~h~~~V~~v~~-------sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~-----~v~~l~~~p~~~~~ 160 (753)
T 3jro_A 93 AVHAVHSASVNSVQW-------APHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAI-----GVNSASWAPATIEE 160 (753)
T ss_dssp EEECCCSSCEEEEEE-------CCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSS-----CEEEEEECCCC---
T ss_pred ccccCCCCCeEEEEE-------CCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCC-----ceEEEEecCccccc
Confidence 123446778999988 556 88999999999999999988733 334444444 899999999
Q ss_pred --------CCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCC---CcEEEEEeCCCcEEEEe
Q 023672 184 --------TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH---TGMLAIGSYSQTSAIYR 251 (279)
Q Consensus 184 --------~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~---~~~l~~~~~dg~i~~wd 251 (279)
++.++++| .||.|++||++++.........+ .+|...|.+++|+| + +.+|++|+.||.|++||
T Consensus 161 ~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~----~~h~~~V~~l~~sp-~~~~~~~l~s~s~Dg~I~iwd 235 (753)
T 3jro_A 161 DGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTL----EGHSDWVRDVAWSP-TVLLRSYLASVSQDRTCIIWT 235 (753)
T ss_dssp ------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEE----CCCSSCEEEEEECC-CCSSSEEEEEEESSSCEEEEE
T ss_pred ccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeee----cCCCCcEEEEEecc-CCCCCCEEEEEecCCEEEEec
Confidence 47888866 99999999999854443444444 68999999999999 6 89999999999999999
Q ss_pred cCCCe-----EEEEEeecCCCEEEEEEccCCCC
Q 023672 252 EDNME-----LLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 252 ~~~~~-----~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+++++ .+.....|.+.|++++|+|+|++
T Consensus 236 ~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~ 268 (753)
T 3jro_A 236 QDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNV 268 (753)
T ss_dssp ESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCC
T ss_pred CCCCCCcceeEEeccCCCCCceEEEEEcCCCCE
Confidence 99874 33334458889999999999974
No 87
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=1.2e-28 Score=195.96 Aligned_cols=211 Identities=11% Similarity=0.229 Sum_probs=165.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccC----CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD----GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSY 110 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~----~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 110 (279)
.+.+||..++......... ....|...|.+++|+|+ +++|++|+.||.|++||+.+++...
T Consensus 45 ~v~vw~~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~-------------- 109 (366)
T 3k26_A 45 RVTLYECHSQGEIRLLQSY-VDADADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIK-------------- 109 (366)
T ss_dssp EEEEEEECGGGCEEEEEEE-ECSCTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEE--------------
T ss_pred EEEEEEcCCCcEEEeeeec-cccCCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEee--------------
Confidence 5788998877766544433 23347889999999998 6799999999999999998754321
Q ss_pred cceeeecCCCceEEEEeeCcccccCC-CCcEEEEecCCCcEEEEECCCCeeeEEE---eccCccccccceeeEEECCCCC
Q 023672 111 EASLVVTEGESVYDFCWFPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTY---RAYDAVDEITAAFSVAFNPTGT 186 (279)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~s~~~d~~i~i~d~~~~~~~~~~---~~~~~~~~~~~v~~~~~~~~~~ 186 (279)
....+...|.+++| +| ++.+|++++.|+.|++||+++++.+..+ ..+.. .|.+++|+|++.
T Consensus 110 ---~~~~~~~~i~~~~~-------~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~-----~v~~~~~~~~~~ 174 (366)
T 3k26_A 110 ---HYVGHGNAINELKF-------HPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRD-----EVLSADYDLLGE 174 (366)
T ss_dssp ---EEESCCSCEEEEEE-------CSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSS-----CEEEEEECTTSS
T ss_pred ---eecCCCCcEEEEEE-------CCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccC-----ceeEEEECCCCC
Confidence 22346778999988 55 7889999999999999999999988887 44444 899999999999
Q ss_pred EEEEe-cCCeEEEEEccCCCCceeeee---------------------ecccccCCCCCceEEEEEccCCCcEEEEEeCC
Q 023672 187 KIFAG-YNKSVRVFDVHRPGRDFEKYS---------------------TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS 244 (279)
Q Consensus 187 ~l~~~-~d~~i~~~d~~~~~~~~~~~~---------------------~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d 244 (279)
+++++ .|+.|++||++++ .....+. .......+|...|.+++|++ .+|++++.|
T Consensus 175 ~l~~~~~dg~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~---~~l~~~~~d 250 (366)
T 3k26_A 175 KIMSCGMDHSLKLWRINSK-RMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLG---DLILSKSCE 250 (366)
T ss_dssp EEEEEETTSCEEEEESCSH-HHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEET---TEEEEECSS
T ss_pred EEEEecCCCCEEEEECCCC-ccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcC---CEEEEEecC
Confidence 99966 9999999999863 1110000 00011134889999999984 599999999
Q ss_pred CcEEEEecCCCe--------------EEEEEeecCCCEEEEEEccC--CCC
Q 023672 245 QTSAIYREDNME--------------LLYVLHGQEGGVTHVSKLSS--AYT 279 (279)
Q Consensus 245 g~i~~wd~~~~~--------------~~~~~~~~~~~v~~~~~spd--g~~ 279 (279)
+.|++||++++. .+..+..|...|++++|+|+ |++
T Consensus 251 ~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~ 301 (366)
T 3k26_A 251 NAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKM 301 (366)
T ss_dssp SEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSE
T ss_pred CEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcE
Confidence 999999998764 37888899999999999999 763
No 88
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-28 Score=200.84 Aligned_cols=195 Identities=18% Similarity=0.194 Sum_probs=147.8
Q ss_pred cc-CCCCCceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccc
Q 023672 55 TS-SIPNNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (279)
Q Consensus 55 ~~-~~h~~~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (279)
.+ .+|.+.|++++|+| ++++|++|+.||+|+|||+.+..... .........|...|.+++|
T Consensus 57 ~~~~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~------------~~~~~~~~~h~~~v~~~~~----- 119 (437)
T 3gre_A 57 TLMENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGE------------VYSSSLTYDCSSTVTQITM----- 119 (437)
T ss_dssp EECTTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTC------------CCSCSEEEECSSCEEEEEE-----
T ss_pred eeccCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCc------------ccceeeeccCCCCEEEEEE-----
Confidence 44 88999999999999 99999999999999999987521100 0011133457889999988
Q ss_pred ccCCCCcEEEEecCCCcEEEEECC---CCeeeEEEeccCcc-----c--cccceeeEE--ECCCCCEEEEe-cCCeEEEE
Q 023672 133 ASDPTSCVFASTTRDHPIHLWDAT---TGLLRCTYRAYDAV-----D--EITAAFSVA--FNPTGTKIFAG-YNKSVRVF 199 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d~~i~i~d~~---~~~~~~~~~~~~~~-----~--~~~~v~~~~--~~~~~~~l~~~-~d~~i~~~ 199 (279)
+|++.+|++++.|+.|++||+. +++....+..+... . ....+.++. +++++.+++++ .|+.|++|
T Consensus 120 --~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iw 197 (437)
T 3gre_A 120 --IPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIF 197 (437)
T ss_dssp --CTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEE
T ss_pred --eCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEE
Confidence 6788999999999999999995 45444433322100 0 112556666 66889899866 99999999
Q ss_pred EccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe-ecCCCEEEEEEcc
Q 023672 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-GQEGGVTHVSKLS 275 (279)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~sp 275 (279)
|++++ . ....+.. ..|...|.+++|+| ++.+|++|+.||.|++||+++++++..+. .|..+|.+++|+|
T Consensus 198 d~~~~-~---~~~~~~~--~~h~~~v~~~~~s~-~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~ 267 (437)
T 3gre_A 198 DIRTL-E---RLQIIEN--SPRHGAVSSICIDE-ECCVLILGTTRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQ 267 (437)
T ss_dssp ETTTC-C---EEEEEEC--CGGGCCEEEEEECT-TSCEEEEEETTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECT
T ss_pred eCCCC-e---eeEEEcc--CCCCCceEEEEECC-CCCEEEEEcCCCeEEEEEcCCccEEEEEecCCCCceEEEEecc
Confidence 99884 2 2233311 12788999999999 89999999999999999999999999886 6778999996665
No 89
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.96 E-value=3e-28 Score=193.31 Aligned_cols=191 Identities=9% Similarity=0.096 Sum_probs=133.5
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
...+|.+.|++++|+|||++|++|+.|+ ++||++.++... ...+...+..+.+
T Consensus 14 ~~~~h~~~V~~v~fs~dg~~la~g~~~~-~~iw~~~~~~~~-------------------~~~~~~~~~~~~~------- 66 (355)
T 3vu4_A 14 PENHVSNPVTDYEFNQDQSCLILSTLKS-FEIYNVHPVAHI-------------------MSQEMRHLSKVRM------- 66 (355)
T ss_dssp -----CCCCCEEEECTTSSEEEEECSSE-EEEEEETTEEEE-------------------EEEECSCCCEEEE-------
T ss_pred ccccCCCceEEEEECCCCCEEEEEcCCE-EEEEecCCccee-------------------eeeecCCeEEEEE-------
Confidence 4578999999999999999999998775 789998754321 1111113444444
Q ss_pred CCCCcEE-EEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCC----------------------------
Q 023672 135 DPTSCVF-ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG---------------------------- 185 (279)
Q Consensus 135 ~~~~~~l-~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~---------------------------- 185 (279)
.++++.+ ++++.|++|++||+.+++.+..+.... .|.++.|+++.
T Consensus 67 ~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~------~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~ 140 (355)
T 3vu4_A 67 LHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDA------PVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFG 140 (355)
T ss_dssp CTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSS------CEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEE
T ss_pred cCCCCEEEEEECCccEEEEEECCCCcEEEEEECCC------ceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCC
Confidence 4455555 567888999999999999888776433 67777777642
Q ss_pred -------CEEE-E-e-cCCeEEEEEccCCCCcee----e----eeecccccCCCCCceEEEEEccCCCcEEEEEeCCCc-
Q 023672 186 -------TKIF-A-G-YNKSVRVFDVHRPGRDFE----K----YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT- 246 (279)
Q Consensus 186 -------~~l~-~-~-~d~~i~~~d~~~~~~~~~----~----~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~- 246 (279)
.+++ + | .||.|++||++++..... . .......+.+|...|.+++|+| ++.+|++|+.|++
T Consensus 141 ~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~-~g~~l~s~s~d~~~ 219 (355)
T 3vu4_A 141 GVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNR-KSDMVATCSQDGTI 219 (355)
T ss_dssp EEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECT-TSSEEEEEETTCSE
T ss_pred ceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECC-CCCEEEEEeCCCCE
Confidence 1222 2 3 566666666665210000 0 0000122378999999999999 9999999999998
Q ss_pred EEEEecCCCeEEEEEe-e-cCCCEEEEEEccCCCC
Q 023672 247 SAIYREDNMELLYVLH-G-QEGGVTHVSKLSSAYT 279 (279)
Q Consensus 247 i~~wd~~~~~~~~~~~-~-~~~~v~~~~~spdg~~ 279 (279)
|++||+++++++..+. + |...|.+++|+|||++
T Consensus 220 v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~ 254 (355)
T 3vu4_A 220 IRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSK 254 (355)
T ss_dssp EEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCE
T ss_pred EEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCE
Confidence 9999999999999998 5 9999999999999974
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.9e-28 Score=210.95 Aligned_cols=191 Identities=17% Similarity=0.266 Sum_probs=152.6
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|.+.|++++|+|++++|++|+.||+|+|||+.++... .......|..+|.+++|+|.
T Consensus 4 ~l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~---------------~~~~l~~h~~~V~~l~~s~~---- 64 (753)
T 3jro_A 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHK---------------LIDTLTGHEGPVWRVDWAHP---- 64 (753)
T ss_dssp ----CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEE---------------EEEEECCCSSCEEEEEECCT----
T ss_pred ecccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCc---------------cceeccCCcCceEEEEecCC----
Confidence 67899999999999999999999999999999998743210 01123456789999988431
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCe--eeEEEeccCccccccceeeEEECCC--CCEEEEe-cCCeEEEEEccCCCCcee
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRDFE 209 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~-~d~~i~~~d~~~~~~~~~ 209 (279)
.++++|++|+.||.|++||+.+++ ....+..+.. .|.+++|+|+ +..++++ .||.|++||++.+... .
T Consensus 65 -~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~-----~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~-~ 137 (753)
T 3jro_A 65 -KFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSA-----SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTT-S 137 (753)
T ss_dssp -TSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS-----CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCC-C
T ss_pred -CCCCEEEEEeCCCeEEEEECCCCcccccccccCCCC-----CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCc-c
Confidence 238899999999999999999987 5556655655 8999999999 8899866 9999999999874221 1
Q ss_pred eeeecccccCCCCCceEEEEEccC------------CCcEEEEEeCCCcEEEEecCCC----eEEEEEeecCCCEEEEEE
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPT------------HTGMLAIGSYSQTSAIYREDNM----ELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~------------~~~~l~~~~~dg~i~~wd~~~~----~~~~~~~~~~~~v~~~~~ 273 (279)
. ..+ .+|...|.+++|+|. ++.+|++|+.||.|++||++++ .++..+.+|..+|++++|
T Consensus 138 ~-~~~----~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~ 212 (753)
T 3jro_A 138 P-III----DAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAW 212 (753)
T ss_dssp C-EEE----ECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEE
T ss_pred e-eEe----ecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeecCCCCcEEEEEe
Confidence 1 122 578889999999994 3889999999999999999887 566788899999999999
Q ss_pred ccC
Q 023672 274 LSS 276 (279)
Q Consensus 274 spd 276 (279)
+|+
T Consensus 213 sp~ 215 (753)
T 3jro_A 213 SPT 215 (753)
T ss_dssp CCC
T ss_pred ccC
Confidence 999
No 91
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.7e-28 Score=196.32 Aligned_cols=186 Identities=9% Similarity=0.008 Sum_probs=149.3
Q ss_pred CCCCCceEEEEEccCCCeE-EEeeCCCeEEEEeCC--CCccccccccccccCCCCcccceee-ecCCCceEEEEeeCccc
Q 023672 57 SIPNNFLKGIKWSPDGSSF-LTSSEDKTLRIFSLP--ENGISYDVNACSLAKDQDSYEASLV-VTEGESVYDFCWFPHMS 132 (279)
Q Consensus 57 ~~h~~~v~~~~~~~~~~~l-~t~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~ 132 (279)
.+|.+.|.+++|+|++++| ++|+.||.|+|||+. ++..... +. ..+...|.+++|
T Consensus 99 ~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~----------------~~~~~~~~~v~~~~~----- 157 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKL----------------RKRFCFSKRPNAISI----- 157 (450)
T ss_dssp -CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEE----------------EEEEECSSCEEEEEE-----
T ss_pred CccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeee----------------eecccCCCCceEEEE-----
Confidence 3677789999999999996 899999999999998 5432111 11 134567888877
Q ss_pred ccCCCCcEEEEecCCCcEEEEECCCCeeeE----EEeccCccccccceeeEEECCC---CCEEEEe-cCCeEEEEEccCC
Q 023672 133 ASDPTSCVFASTTRDHPIHLWDATTGLLRC----TYRAYDAVDEITAAFSVAFNPT---GTKIFAG-YNKSVRVFDVHRP 204 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~----~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~-~d~~i~~~d~~~~ 204 (279)
+|++.+|++++.++.|++|++.+++... .+..+.. .|.+++|+|+ +++|+++ .|+.|++||++++
T Consensus 158 --sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~ 230 (450)
T 2vdu_B 158 --AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHVS-----MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQC 230 (450)
T ss_dssp --CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECSS-----CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCT
T ss_pred --cCCCCEEEEEeCCCcEEEEecCCcccccccceeeecccC-----ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCC
Confidence 7789999999999999999998876543 4555554 8999999999 8888866 9999999999874
Q ss_pred CCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec--------------------
Q 023672 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-------------------- 264 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~-------------------- 264 (279)
.. ...+ ..+|...|.+++|+ ++.+|++|+.|+.|++||+++++++..+..+
T Consensus 231 -~~---~~~~---~~~h~~~v~~~~~s--d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 301 (450)
T 2vdu_B 231 -FI---VDKW---LFGHKHFVSSICCG--KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNE 301 (450)
T ss_dssp -TC---EEEE---CCCCSSCEEEEEEC--STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC-------
T ss_pred -ce---eeee---ecCCCCceEEEEEC--CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhccccccccccc
Confidence 22 1121 15889999999999 6789999999999999999999998888733
Q ss_pred -----CCCEEEEEEccCCCC
Q 023672 265 -----EGGVTHVSKLSSAYT 279 (279)
Q Consensus 265 -----~~~v~~~~~spdg~~ 279 (279)
...|.+++|+|+|++
T Consensus 302 ~~~~~~~~v~~i~~~~~~~~ 321 (450)
T 2vdu_B 302 NNDIIEFAVSKIIKSKNLPF 321 (450)
T ss_dssp ---CBCCCEEEEEECSSSSE
T ss_pred ccccceEEEEEEEEeCCCCE
Confidence 357999999999874
No 92
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=3.7e-28 Score=193.36 Aligned_cols=178 Identities=11% Similarity=0.065 Sum_probs=135.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.+..... .+ .|.+.|.+++|+|||++|++++.| .+.+|+..++..... ..
T Consensus 158 ~i~iwd~~~~~~~~------~~-~~~~~V~~v~fspdg~~l~s~s~~-~~~~~~~~~~~~~~~---------------~~ 214 (365)
T 4h5i_A 158 IMRIIDPSDLTEKF------EI-ETRGEVKDLHFSTDGKVVAYITGS-SLEVISTVTGSCIAR---------------KT 214 (365)
T ss_dssp EEEEEETTTTEEEE------EE-ECSSCCCEEEECTTSSEEEEECSS-CEEEEETTTCCEEEE---------------EC
T ss_pred EEEEeECCCCcEEE------Ee-CCCCceEEEEEccCCceEEeccce-eEEEEEeccCcceee---------------ee
Confidence 57889988877654 22 377889999999999999999865 566666655432111 12
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCC----cEEEEECCCCeee----EEEeccCccccccceeeEEECCCCC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDH----PIHLWDATTGLLR----CTYRAYDAVDEITAAFSVAFNPTGT 186 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~----~i~i~d~~~~~~~----~~~~~~~~~~~~~~v~~~~~~~~~~ 186 (279)
...+...|..++| +|++..+++++.|+ .+++|++...... ..+..+.. .|++++|+|+|+
T Consensus 215 ~~~~~~~v~~v~f-------spdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~-----~V~~~~~Spdg~ 282 (365)
T 4h5i_A 215 DFDKNWSLSKINF-------IADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFK-----GITSMDVDMKGE 282 (365)
T ss_dssp CCCTTEEEEEEEE-------EETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCS-----CEEEEEECTTSC
T ss_pred cCCCCCCEEEEEE-------cCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCC-----CeEeEEECCCCC
Confidence 2345567888877 67899999998887 6888998776532 23334443 899999999999
Q ss_pred EEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCC
Q 023672 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (279)
Q Consensus 187 ~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~ 255 (279)
+|++| .|+.|+|||++++ +.+..+ ..+|...|++++|+| ++.+|++|+.|++|+|||+...
T Consensus 283 ~lasgs~D~~V~iwd~~~~----~~~~~~---~~gH~~~V~~v~fSp-dg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 283 LAVLASNDNSIALVKLKDL----SMSKIF---KQAHSFAITEVTISP-DSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EEEEEETTSCEEEEETTTT----EEEEEE---TTSSSSCEEEEEECT-TSCEEEEEETTSEEEEEECCTT
T ss_pred ceEEEcCCCEEEEEECCCC----cEEEEe---cCcccCCEEEEEECC-CCCEEEEEeCCCeEEEEEcCCC
Confidence 99976 9999999999984 333332 268999999999999 9999999999999999999643
No 93
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=8.6e-29 Score=201.77 Aligned_cols=195 Identities=11% Similarity=0.075 Sum_probs=147.6
Q ss_pred CCCCceEEEEEccCCCeEEEeeCCCeEEEEeCC---CCccccccccccccCCCCcccceeeec---CCCceEEEEeeCcc
Q 023672 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLP---ENGISYDVNACSLAKDQDSYEASLVVT---EGESVYDFCWFPHM 131 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~ 131 (279)
+|.+.|.+++|+|++++|++|+.||+|++||+. ++........ ..+..+... +...+.++.+
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~--------~~i~~~~~~~~~~~~~~~~~~~---- 176 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNC--------ECIRKINLKNFGKNEYAVRMRA---- 176 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEE--------EEEEEEEGGGGSSCCCEEEEEE----
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeecccc--------ceeEEEEccCcccccCceEEEE----
Confidence 589999999999999999999999999999995 2222110000 000111111 3445555554
Q ss_pred cccCCCCcEEEEecCCCcEEEEECCCCeeeEEEec--cCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCce
Q 023672 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRA--YDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDF 208 (279)
Q Consensus 132 ~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~ 208 (279)
.+++++.+|++++.|+.|++||+++++.+..+.. +.. .|.+++|+|++++++++ .|+.|++||++++
T Consensus 177 -~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~h~~-----~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~---- 246 (437)
T 3gre_A 177 -FVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSPRHG-----AVSSICIDEECCVLILGTTRGIIDIWDIRFN---- 246 (437)
T ss_dssp -EECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCGGGC-----CEEEEEECTTSCEEEEEETTSCEEEEETTTT----
T ss_pred -EEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCCCCC-----ceEEEEECCCCCEEEEEcCCCeEEEEEcCCc----
Confidence 2478899999999999999999999999988887 444 89999999999999966 9999999999973
Q ss_pred eeeeecccccCCCCCceEEEEEccC---CCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCC
Q 023672 209 EKYSTLKGNKEGQAGIMSAIAFSPT---HTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSA 277 (279)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~sp~---~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg 277 (279)
.....+. ..|...|.+++|+|. ++.+|++|+.||.|++||+++++++..+.+|...+..+.|+|++
T Consensus 247 ~~~~~~~---~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (437)
T 3gre_A 247 VLIRSWS---FGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIE 315 (437)
T ss_dssp EEEEEEB---CTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBC
T ss_pred cEEEEEe---cCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccc
Confidence 3333321 256678999976651 57799999999999999999999999998776655555555554
No 94
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=4e-28 Score=212.17 Aligned_cols=189 Identities=18% Similarity=0.219 Sum_probs=160.8
Q ss_pred eccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
+.+.+|.+.|++++|+|++++|++|+.||.|+|||+.++.... ....+..+|.++.|
T Consensus 7 ~~~~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~-----------------~~~~~~~~v~~~~~------ 63 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVR-----------------SIQVTETPVRAGKF------ 63 (814)
T ss_dssp EEEEEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEE-----------------EEECCSSCEEEEEE------
T ss_pred eeeecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEE-----------------EEecCCCcEEEEEE------
Confidence 3678899999999999999999999999999999998764321 22346678999988
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeee
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYS 212 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~ 212 (279)
+|++++|++++.|+.|++||+.+++.+..+..+.. .|.+++|+|++.+++++ .|+.|++||+.++.. ...
T Consensus 64 -s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~---~~~ 134 (814)
T 3mkq_A 64 -IARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPD-----YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---LEQ 134 (814)
T ss_dssp -EGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE---EEE
T ss_pred -eCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCC-----CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce---EEE
Confidence 56788999999999999999999999998887776 89999999999999866 899999999987321 222
Q ss_pred ecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC-CCEEEEEEcc--CCC
Q 023672 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-GGVTHVSKLS--SAY 278 (279)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~v~~~~~sp--dg~ 278 (279)
.+ .+|...|.+++|+|.++..|++++.||.|++||+.++.....+..+. ..+..++|+| +|.
T Consensus 135 ~~----~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (814)
T 3mkq_A 135 TF----EGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP 199 (814)
T ss_dssp EE----ECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC
T ss_pred EE----cCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC
Confidence 23 57888999999999667899999999999999999988887777655 8899999999 765
No 95
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.96 E-value=8.2e-28 Score=195.62 Aligned_cols=200 Identities=15% Similarity=0.223 Sum_probs=151.2
Q ss_pred ccCCCCCceEEEEEccC-CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 55 TSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
...+|.+.|++++|+|+ +.+|++++.||.|++|++.+...... .............|...+.+++|
T Consensus 123 ~~~~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~-------~~~~~~~~~~~~~h~~~v~~l~~------ 189 (430)
T 2xyi_A 123 IKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPE-------PSGECQPDLRLRGHQKEGYGLSW------ 189 (430)
T ss_dssp EEEEESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCC-------TTCCCCCSEEEECCSSCCCCEEE------
T ss_pred EEEcCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccC-------ccccCCCcEEecCCCCCeEEEEe------
Confidence 45679999999999997 67999999999999999975311100 00000111133456778888888
Q ss_pred cCCCCc-EEEEecCCCcEEEEECCCCee-------eEEEeccCccccccceeeEEECC-CCCEEEEe-cCCeEEEEEccC
Q 023672 134 SDPTSC-VFASTTRDHPIHLWDATTGLL-------RCTYRAYDAVDEITAAFSVAFNP-TGTKIFAG-YNKSVRVFDVHR 203 (279)
Q Consensus 134 ~~~~~~-~l~s~~~d~~i~i~d~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~d~~i~~~d~~~ 203 (279)
+|++. +|++|+.||.|++||+.++.. ...+..+.. .|.+++|+| ++.+++++ .|+.|++||+++
T Consensus 190 -~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~-----~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~ 263 (430)
T 2xyi_A 190 -NPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTA-----VVEDVAWHLLHESLFGSVADDQKLMIWDTRN 263 (430)
T ss_dssp -CTTSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSS-----CEEEEEECSSCTTEEEEEETTSEEEEEETTC
T ss_pred -CCCCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCC-----CEeeeEEeCCCCCEEEEEeCCCeEEEEECCC
Confidence 56666 999999999999999987422 334444444 899999999 56777765 999999999997
Q ss_pred CCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCC-CeEEEEEeecCCCEEEEEEccCCC
Q 023672 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
... ......+ ..|...|.+++|+|++..+|++|+.||.|++||+++ ..++..+..|...|.+++|+|+|+
T Consensus 264 ~~~-~~~~~~~----~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~ 334 (430)
T 2xyi_A 264 NNT-SKPSHTV----DAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNE 334 (430)
T ss_dssp SCS-SSCSEEE----ECCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCT
T ss_pred CCC-CcceeEe----ecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCC
Confidence 421 1122222 478889999999994444799999999999999998 567889999999999999999985
No 96
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.7e-28 Score=192.74 Aligned_cols=207 Identities=9% Similarity=-0.013 Sum_probs=149.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.+++....+. ...|.++.|+|+ +++++.|++|++|+........... ........
T Consensus 59 ~v~iwd~~~~~~~~~~~--------~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~-------~~~~~~~~ 120 (343)
T 3lrv_A 59 ALHFTQLKDSKTITTIT--------TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSK-------TNKVLREI 120 (343)
T ss_dssp EEEEEEESSSSCEEEEE--------EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETT-------TCCEEEEE
T ss_pred cEEEEECCCCcEEEEEe--------cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecC-------CcceeEEe
Confidence 67888988887765332 355778888887 8999999999999887432111100 01111223
Q ss_pred eecCCCceEEEEeeCcccccCC--CCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-
Q 023672 115 VVTEGESVYDFCWFPHMSASDP--TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~--~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 191 (279)
...+...|.+++| +| ++.++++++.|++|++||+++++.......+.. ..+.+++|+|++.++++|
T Consensus 121 ~~~~~~~v~~~~~-------~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~----~~i~~~~~~pdg~~lasg~ 189 (343)
T 3lrv_A 121 EVDSANEIIYMYG-------HNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSD----VEYSSGVLHKDSLLLALYS 189 (343)
T ss_dssp ECCCSSCEEEEEC-------CC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSS----CCCCEEEECTTSCEEEEEC
T ss_pred ecCCCCCEEEEEc-------CCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCC----CceEEEEECCCCCEEEEEc
Confidence 3345567888877 66 889999999999999999999988665543321 268999999999999976
Q ss_pred cCCeEEEEEccCCCCceeeeeecccccCC-CCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee---cCCC
Q 023672 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEG-QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG---QEGG 267 (279)
Q Consensus 192 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~ 267 (279)
.|+.|++||++++.... ..+ .. |...|.+++|+| ++.+|++++ |+.|++||+++++.+..+.. |...
T Consensus 190 ~dg~i~iwd~~~~~~~~---~~~----~~~h~~~v~~l~fs~-~g~~l~s~~-~~~v~iwd~~~~~~~~~~~~~~~~~~~ 260 (343)
T 3lrv_A 190 PDGILDVYNLSSPDQAS---SRF----PVDEEAKIKEVKFAD-NGYWMVVEC-DQTVVCFDLRKDVGTLAYPTYTIPEFK 260 (343)
T ss_dssp TTSCEEEEESSCTTSCC---EEC----CCCTTSCEEEEEECT-TSSEEEEEE-SSBEEEEETTSSTTCBSSCCCBC----
T ss_pred CCCEEEEEECCCCCCCc---cEE----eccCCCCEEEEEEeC-CCCEEEEEe-CCeEEEEEcCCCCcceeeccccccccc
Confidence 99999999999842211 122 44 889999999999 899999999 55999999999876544443 3333
Q ss_pred E--EEEEEccCCCC
Q 023672 268 V--THVSKLSSAYT 279 (279)
Q Consensus 268 v--~~~~~spdg~~ 279 (279)
+ .+++|+|+|++
T Consensus 261 ~~~~~~~~~~~g~~ 274 (343)
T 3lrv_A 261 TGTVTYDIDDSGKN 274 (343)
T ss_dssp -CCEEEEECTTSSE
T ss_pred ccceEEEECCCCCE
Confidence 4 36999999974
No 97
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.2e-27 Score=194.76 Aligned_cols=185 Identities=11% Similarity=0.094 Sum_probs=141.2
Q ss_pred CCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecC----CCceEEEEeeCcccc
Q 023672 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTE----GESVYDFCWFPHMSA 133 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~v~~~~~~~~~~~ 133 (279)
+|.+.|.+++|+|+|++||+++.||.|+|||..+ . ...+. ++ ...+.+++|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~----------------l~~l~-~~~~~~~~sv~svaf------ 137 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--M----------------LTNLD-SKGNLSSRTYHCFEW------ 137 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--E----------------EEECC-CSSCSTTTCEEEEEE------
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--e----------------eeecc-CCCccccccEEEEEE------
Confidence 5688999999999999999999999999999642 0 00011 11 125888877
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCee-------eEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCC
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLL-------RCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGR 206 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~-------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~ 206 (279)
||+|++|++|+.||+|++||+.++.. +.++..+.. ++...|.+++|+|+| +++++.|+.|++||+..+.
T Consensus 138 -SPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~-gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~- 213 (588)
T 2j04_A 138 -NPIESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA-GSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASS- 213 (588)
T ss_dssp -CSSSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT-TCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSS-
T ss_pred -cCCCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccc-cccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCc-
Confidence 88999999999999999999998753 455543331 233489999999999 5556699999999998732
Q ss_pred ceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE--ccCCC
Q 023672 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK--LSSAY 278 (279)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--spdg~ 278 (279)
......++. .+|...|.+++|+ +..|++++ +++|++||+.+++......+|.+.|.+++| +|||+
T Consensus 214 ~~~~~~tL~---~~h~~~V~svaFs---g~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~ 280 (588)
T 2j04_A 214 HQPVSRMIQ---NASRRKITDLKIV---DYKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKEST 280 (588)
T ss_dssp SCCCEEEEE---CCCSSCCCCEEEE---TTEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCE
T ss_pred cccceeeec---ccccCcEEEEEEE---CCEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCC
Confidence 111111221 3677899999998 37888887 699999999988875444479999999999 99985
No 98
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.4e-28 Score=195.19 Aligned_cols=215 Identities=15% Similarity=0.226 Sum_probs=159.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.++..... .....|...|.+++|+|++++|++|+.||.|++||+.+..... .....
T Consensus 46 ~v~iw~~~~~~~~~~----~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~-------------~~~~~ 108 (416)
T 2pm9_A 46 SLELWSLLAADSEKP----IASLQVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAI-------------NSMAR 108 (416)
T ss_dssp CCEEEESSSGGGCSC----SCCCCCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCC-------------CEEEE
T ss_pred eEEEEEccCCCCCcE----EEEEecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccc-------------cchhh
Confidence 578898887653211 1234588999999999999999999999999999998621100 01112
Q ss_pred eecCCCceEEEEeeCcccccCCC-CcEEEEecCCCcEEEEECCCCe------eeEEEeccCccccccceeeEEECCC-CC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPT-SCVFASTTRDHPIHLWDATTGL------LRCTYRAYDAVDEITAAFSVAFNPT-GT 186 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~-~~~l~s~~~d~~i~i~d~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~-~~ 186 (279)
...|...|.+++| +|+ +.+|++++.|+.|++||+++++ ....+. ....+...|.+++|+|+ +.
T Consensus 109 ~~~h~~~v~~~~~-------~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~ 179 (416)
T 2pm9_A 109 FSNHSSSVKTVKF-------NAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPG--QSMSSVDEVISLAWNQSLAH 179 (416)
T ss_dssp CCCSSSCCCEEEE-------CSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCC--CSCCSSCCCCEEEECSSCTT
T ss_pred ccCCccceEEEEE-------cCCCCCEEEEEcCCCeEEEEECCCCccccccccccccc--cccCCCCCeeEEEeCCCCCc
Confidence 3456678999888 556 7899999999999999999876 322221 11122238999999999 67
Q ss_pred EEEEe-cCCeEEEEEccCCCCceeeeeecc--cccCCCCCceEEEEEccCCCcEEEEEeCCC---cEEEEecCCC-eEEE
Q 023672 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLK--GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ---TSAIYREDNM-ELLY 259 (279)
Q Consensus 187 ~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~--~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg---~i~~wd~~~~-~~~~ 259 (279)
+++++ .|+.|++||++++ . ....+. ....+|...|.+++|+|++..+|++++.|+ .|++||++++ .++.
T Consensus 180 ~l~~~~~dg~v~iwd~~~~-~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~ 255 (416)
T 2pm9_A 180 VFASAGSSNFASIWDLKAK-K---EVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQ 255 (416)
T ss_dssp EEEEESSSSCEEEEETTTT-E---EEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSB
T ss_pred EEEEEcCCCCEEEEECCCC-C---cceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcE
Confidence 88866 9999999999974 2 222221 111334788999999994457999999998 9999999987 6777
Q ss_pred EEe-ecCCCEEEEEEcc-CCCC
Q 023672 260 VLH-GQEGGVTHVSKLS-SAYT 279 (279)
Q Consensus 260 ~~~-~~~~~v~~~~~sp-dg~~ 279 (279)
.+. +|...|.+++|+| +|++
T Consensus 256 ~~~~~~~~~v~~~~~s~~~~~~ 277 (416)
T 2pm9_A 256 TLNQGHQKGILSLDWCHQDEHL 277 (416)
T ss_dssp CCCSCCSSCEEEEEECSSCSSC
T ss_pred EeecCccCceeEEEeCCCCCCe
Confidence 888 8999999999999 7763
No 99
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.3e-27 Score=181.24 Aligned_cols=199 Identities=15% Similarity=0.181 Sum_probs=145.4
Q ss_pred eeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCcccccccc-------ccc--------cCCCCcc------
Q 023672 52 QFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNA-------CSL--------AKDQDSY------ 110 (279)
Q Consensus 52 ~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~-------~~~--------~~~~~~~------ 110 (279)
....+.+|.+.|++++| |++++|++|+.||.|++||+.++........ ... ....+..
T Consensus 10 ~~~~l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~ 88 (313)
T 3odt_A 10 LSATLKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMINGVPL 88 (313)
T ss_dssp EEEEECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEEEEET
T ss_pred HHHHhhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEEEEEe
Confidence 34478899999999999 9999999999999999999987643211100 000 0000000
Q ss_pred -------cceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECC
Q 023672 111 -------EASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP 183 (279)
Q Consensus 111 -------~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 183 (279)
.......+...|.++.| ++.++++++.|+.|++|| .++....+..+.. .+.++.|+|
T Consensus 89 ~~~~~~~~~~~~~~~~~~i~~~~~---------~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~-----~v~~~~~~~ 152 (313)
T 3odt_A 89 FATSGEDPLYTLIGHQGNVCSLSF---------QDGVVISGSWDKTAKVWK--EGSLVYNLQAHNA-----SVWDAKVVS 152 (313)
T ss_dssp TCCTTSCC-CEECCCSSCEEEEEE---------ETTEEEEEETTSEEEEEE--TTEEEEEEECCSS-----CEEEEEEEE
T ss_pred eecCCCCcccchhhcccCEEEEEe---------cCCEEEEEeCCCCEEEEc--CCcEEEecccCCC-----ceeEEEEcc
Confidence 01111223344555544 355788888888888888 5566666666655 889999988
Q ss_pred -CCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEE
Q 023672 184 -TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL 261 (279)
Q Consensus 184 -~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 261 (279)
++..++++ .|+.|++||... ....+. ..|...+.+++|+| ++. +++++.||.|++||+++++++..+
T Consensus 153 ~~~~~l~~~~~d~~i~i~d~~~------~~~~~~---~~~~~~i~~~~~~~-~~~-~~~~~~dg~i~i~d~~~~~~~~~~ 221 (313)
T 3odt_A 153 FSENKFLTASADKTIKLWQNDK------VIKTFS---GIHNDVVRHLAVVD-DGH-FISCSNDGLIKLVDMHTGDVLRTY 221 (313)
T ss_dssp TTTTEEEEEETTSCEEEEETTE------EEEEEC---SSCSSCEEEEEEEE-TTE-EEEEETTSEEEEEETTTCCEEEEE
T ss_pred CCCCEEEEEECCCCEEEEecCc------eEEEEe---ccCcccEEEEEEcC-CCe-EEEccCCCeEEEEECCchhhhhhh
Confidence 78888865 999999999442 222221 23788999999999 777 899999999999999999999999
Q ss_pred eecCCCEEEEEEccCCC
Q 023672 262 HGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 262 ~~~~~~v~~~~~spdg~ 278 (279)
..|...|++++|+|+|+
T Consensus 222 ~~~~~~i~~~~~~~~~~ 238 (313)
T 3odt_A 222 EGHESFVYCIKLLPNGD 238 (313)
T ss_dssp ECCSSCEEEEEECTTSC
T ss_pred hcCCceEEEEEEecCCC
Confidence 99999999999999984
No 100
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.96 E-value=4.4e-28 Score=197.97 Aligned_cols=231 Identities=13% Similarity=0.149 Sum_probs=157.1
Q ss_pred eeeEecCCCCcc-----cceeeeeeccCCCC------------CceEEEEEccCC--CeEEEeeCCCeEEEEeCCCCccc
Q 023672 35 PLIRFDVPPHRT-----YHFYNQFRTSSIPN------------NFLKGIKWSPDG--SSFLTSSEDKTLRIFSLPENGIS 95 (279)
Q Consensus 35 ~~~~~d~~~~~~-----~~~~~~~~~~~~h~------------~~v~~~~~~~~~--~~l~t~~~dg~i~iwd~~~~~~~ 95 (279)
.+.+||+.+... ...+.....+.+|. +.|++++|+|++ .+|++++.|++|++||+.++...
T Consensus 51 ~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~ 130 (447)
T 3dw8_B 51 RVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKR 130 (447)
T ss_dssp EEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEE
T ss_pred eEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCC
Confidence 678888876652 11222344677898 889999999998 79999999999999999764331
Q ss_pred cccccccc-------cCCC--C--------------cccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEE
Q 023672 96 YDVNACSL-------AKDQ--D--------------SYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHL 152 (279)
Q Consensus 96 ~~~~~~~~-------~~~~--~--------------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i 152 (279)
........ .... - .....+...|...|.+++| +|++.+|++| .|+.|++
T Consensus 131 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~-------~~~~~~l~s~-~d~~i~i 202 (447)
T 3dw8_B 131 PEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISI-------NSDYETYLSA-DDLRINL 202 (447)
T ss_dssp EECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEE-------CTTSSEEEEE-CSSEEEE
T ss_pred cceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEE-------cCCCCEEEEe-CCCeEEE
Confidence 10000000 0000 0 0000112356778888877 7789999998 7999999
Q ss_pred EECCC-CeeeEEEecc--CccccccceeeEEECCCC-CEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCC----
Q 023672 153 WDATT-GLLRCTYRAY--DAVDEITAAFSVAFNPTG-TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG---- 223 (279)
Q Consensus 153 ~d~~~-~~~~~~~~~~--~~~~~~~~v~~~~~~~~~-~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---- 223 (279)
||+++ ++....+... ....+...|.+++|+|++ .+++++ .|+.|++||++++.........+ .+|..
T Consensus 203 wd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~----~~~~~~~~~ 278 (447)
T 3dw8_B 203 WHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLF----EEPEDPSNR 278 (447)
T ss_dssp EETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEE----CCC-----C
T ss_pred EECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEe----ccCCCcccc
Confidence 99984 4444432111 111223389999999998 888866 99999999999843211112222 34443
Q ss_pred --------ceEEEEEccCCCcEEEEEeCCCcEEEEecCC-CeEEEEEeecCCC---------------EEEEEEccCCCC
Q 023672 224 --------IMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MELLYVLHGQEGG---------------VTHVSKLSSAYT 279 (279)
Q Consensus 224 --------~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~-~~~~~~~~~~~~~---------------v~~~~~spdg~~ 279 (279)
.|.+++|+| ++.+|++++. +.|++||+++ ++++..+.+|... +..++|+|||++
T Consensus 279 ~~~~~~~~~v~~~~~s~-~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~ 356 (447)
T 3dw8_B 279 SFFSEIISSISDVKFSH-SGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSV 356 (447)
T ss_dssp CHHHHHTTCEEEEEECT-TSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSE
T ss_pred ccccccCceEEEEEECC-CCCEEEEeeC-CeEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCE
Confidence 899999999 9999999998 9999999997 8888889888632 334999999874
No 101
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.7e-27 Score=188.18 Aligned_cols=167 Identities=13% Similarity=0.069 Sum_probs=127.3
Q ss_pred cCCCCCceEEEEEcc--CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 56 SSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 56 ~~~h~~~v~~~~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
..+|.+.|.+++|+| ++++|++|+.||+|++||++++.... .....+...+.+++|
T Consensus 121 ~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~----------------~~~~~~~~~i~~~~~------ 178 (343)
T 3lrv_A 121 EVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYI----------------VHSAKSDVEYSSGVL------ 178 (343)
T ss_dssp ECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEE----------------EECCCSSCCCCEEEE------
T ss_pred ecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEE----------------EEecCCCCceEEEEE------
Confidence 346788999999999 99999999999999999998764311 012234446777766
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCeee-EEEec-cCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeee
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLLR-CTYRA-YDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKY 211 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~~-~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~ 211 (279)
+|++.+|++|+.|+.|++||+++++.. ..+.. |.. .|.+++|+|++.+|+++.++.|++||+++. .....+
T Consensus 179 -~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~-----~v~~l~fs~~g~~l~s~~~~~v~iwd~~~~-~~~~~~ 251 (343)
T 3lrv_A 179 -HKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEA-----KIKEVKFADNGYWMVVECDQTVVCFDLRKD-VGTLAY 251 (343)
T ss_dssp -CTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTS-----CEEEEEECTTSSEEEEEESSBEEEEETTSS-TTCBSS
T ss_pred -CCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCC-----CEEEEEEeCCCCEEEEEeCCeEEEEEcCCC-Ccceee
Confidence 778999999999999999999999877 67766 554 899999999999999775669999999984 222222
Q ss_pred eecccccCCCCCce--EEEEEccCCCcEEEEEeC-CCcEEEEecCCCe
Q 023672 212 STLKGNKEGQAGIM--SAIAFSPTHTGMLAIGSY-SQTSAIYREDNME 256 (279)
Q Consensus 212 ~~~~~~~~~~~~~v--~~~~~sp~~~~~l~~~~~-dg~i~~wd~~~~~ 256 (279)
..+ ..|...+ .+++|+| ++.+|++++. |+.|++|++.+..
T Consensus 252 ~~~----~~~~~~~~~~~~~~~~-~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 252 PTY----TIPEFKTGTVTYDIDD-SGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp CCC----BC-----CCEEEEECT-TSSEEEEEETTTTEEEEEEECTTT
T ss_pred ccc----ccccccccceEEEECC-CCCEEEEecCCCCcEEEEEEcccc
Confidence 111 1233333 4699999 8999999888 9999999986543
No 102
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.96 E-value=9.9e-28 Score=195.19 Aligned_cols=201 Identities=10% Similarity=0.108 Sum_probs=142.3
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccc----cccccccC---------CCCcccceeeecCCCceEEE
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYD----VNACSLAK---------DQDSYEASLVVTEGESVYDF 125 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~----~~~~~~~~---------~~~~~~~~~~~~~~~~v~~~ 125 (279)
-...|.+++|+|||+++|+++.|++|+ |...++.... .....+.+ ........+...+...|.++
T Consensus 14 ~~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l~gh~~~v~~V~FsPdg~~~~~~~~~~~~~~~~~~~~~~~V~~v 91 (588)
T 2j04_A 14 FEDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDINCNSKNLFHVKEFPLEFENKLDFELAQQNGLLNSQPVCYPRVC 91 (588)
T ss_dssp CSSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCCSSBGGGTEEEEEECCCCCCTTTTSCCCSSCSSTTSCSCCEEEE
T ss_pred hhccEEEEEECCCCCEEEEEcCCceee--cccccceecCCCccEEEEEECCCCCcceEEEEeCCCceEeecCCCCcEEEE
Confidence 457899999999999999999999998 6544432210 00000000 00010111222335678888
Q ss_pred EeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCC
Q 023672 126 CWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (279)
Q Consensus 126 ~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~ 204 (279)
+| +|+|..||+++.||.|++||..+ .+..+. +...-....+.+++|||+|++|++| .||.|++||+..+
T Consensus 92 aw-------SPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~ 161 (588)
T 2j04_A 92 KP-------SPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKN 161 (588)
T ss_dssp EE-------CSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECCCC
T ss_pred EE-------CCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCC
Confidence 77 78999999999999999999644 555555 4421112258999999999999966 9999999999873
Q ss_pred CC---ceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeE---EEEEe-ecCCCEEEEEEc
Q 023672 205 GR---DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL---LYVLH-GQEGGVTHVSKL 274 (279)
Q Consensus 205 ~~---~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~---~~~~~-~~~~~v~~~~~s 274 (279)
.. .+-.+.++.....+|...|.+++|+| ++ +++++.|++|++||+.++.. ..++. +|...|.+++|+
T Consensus 162 ~l~~~~~i~l~ti~~~~~gh~~~V~sVawSP-dg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 162 SENTPEFYFESSIRLSDAGSKDWVTHIVWYE-DV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp TTTCCCCEEEEEEECSCTTCCCCEEEEEEET-TE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred ccccccceeeeeeecccccccccEEEEEEcC-Cc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 21 01123454444467889999999999 77 78888999999999988773 35674 788899999998
No 103
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=4.2e-27 Score=214.16 Aligned_cols=169 Identities=18% Similarity=0.267 Sum_probs=144.2
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|.+.|++++|+|++++|++|+.||+|++||+.++.... ....|...|.+++|
T Consensus 610 ~~~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~-----------------~~~~h~~~v~~~~~------- 665 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLL-----------------DIKAHEDEVLCCAF------- 665 (1249)
T ss_dssp EECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEE-----------------EECCCSSCEEEEEE-------
T ss_pred EEecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEE-----------------EeccCCCCEEEEEE-------
Confidence 577899999999999999999999999999999998764321 22356778999887
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCC--CCEEEEe-cCCeEEEEEccCCCCceeee
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT--GTKIFAG-YNKSVRVFDVHRPGRDFEKY 211 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~-~d~~i~~~d~~~~~~~~~~~ 211 (279)
+|++.+|++++.|+.|++||+.+++.+..+..+.. .|.+++|+|+ +.+++++ .|+.|++||++++ ...
T Consensus 666 s~~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~----~~~ 736 (1249)
T 3sfz_A 666 SSDDSYIATCSADKKVKIWDSATGKLVHTYDEHSE-----QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQK----ECR 736 (1249)
T ss_dssp CTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEECSSSSCCEEEEEETTSCEEEEETTSS----SEE
T ss_pred ecCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCC-----cEEEEEEecCCCceEEEEEeCCCeEEEEECCCc----chh
Confidence 77899999999999999999999999999988776 8999999995 4567765 9999999999984 233
Q ss_pred eecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEE
Q 023672 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL 261 (279)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 261 (279)
..+ .+|...|.+++|+| ++.+|++++.||.|++||+++++....+
T Consensus 737 ~~~----~~h~~~v~~~~~sp-~~~~l~s~s~dg~v~vwd~~~~~~~~~~ 781 (1249)
T 3sfz_A 737 NTM----FGHTNSVNHCRFSP-DDELLASCSADGTLRLWDVRSANERKSI 781 (1249)
T ss_dssp EEE----CCCSSCEEEEEECS-STTEEEEEESSSEEEEEEGGGTEEEEEE
T ss_pred hee----cCCCCCEEEEEEec-CCCEEEEEECCCeEEEEeCCCCccccee
Confidence 333 68899999999999 8999999999999999999888765544
No 104
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.96 E-value=2e-26 Score=189.25 Aligned_cols=213 Identities=14% Similarity=0.200 Sum_probs=163.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEc--cCCCeEEEeeCCCeEEEEeCCCCccccccccc------cccCC
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWS--PDGSSFLTSSEDKTLRIFSLPENGISYDVNAC------SLAKD 106 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~--~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~------~~~~~ 106 (279)
.+.+||+.++.... .+.+|.+.|.+++|+ +++++|++|+.||+|++||+.++......... .....
T Consensus 184 ~i~vwd~~~~~~~~------~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 184 TVRVWDIKKGCCTH------VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp CEEEEETTTTEEEE------EECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGG
T ss_pred CEEEEECCCCcEEE------EECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccC
Confidence 56788888776554 677899999999998 47789999999999999999876542211100 00000
Q ss_pred CCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCC
Q 023672 107 QDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT 186 (279)
Q Consensus 107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 186 (279)
...........+...+.++ ++++.++++++.|+.|++||+++++.+..+..+.. .|.+++|+|+++
T Consensus 258 ~~~~~~~~~~~~~~~v~~~---------~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~~~~~ 323 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTV---------SGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHTD-----RIYSTIYDHERK 323 (464)
T ss_dssp GCTTEEEEECCCSSCEEEE---------EEETTEEEEEETTSCEEEEETTTTEEEEEECCCSS-----CEEEEEEETTTT
T ss_pred CCeEEEEEccCccceEEEE---------cCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC-----CEEEEEEcCCCC
Confidence 1111122333455556655 44778999999999999999999999999887776 899999999999
Q ss_pred EEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC
Q 023672 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265 (279)
Q Consensus 187 ~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 265 (279)
+++++ .|+.|++||++++ +....+ .+|...|.+++|++ .+|++|+.||.|++||++++....... +.
T Consensus 324 ~l~sg~~dg~i~vwd~~~~----~~~~~~----~~h~~~v~~~~~~~---~~l~s~s~dg~v~vwd~~~~~~~~~~~-~~ 391 (464)
T 3v7d_B 324 RCISASMDTTIRIWDLENG----ELMYTL----QGHTALVGLLRLSD---KFLVSAAADGSIRGWDANDYSRKFSYH-HT 391 (464)
T ss_dssp EEEEEETTSCEEEEETTTT----EEEEEE----CCCSSCEEEEEECS---SEEEEEETTSEEEEEETTTCCEEEEEE-CT
T ss_pred EEEEEeCCCcEEEEECCCC----cEEEEE----eCCCCcEEEEEEcC---CEEEEEeCCCcEEEEECCCCceeeeec-CC
Confidence 99976 9999999999884 333444 68899999999975 689999999999999999988776665 66
Q ss_pred CCEEEEEEccCCCC
Q 023672 266 GGVTHVSKLSSAYT 279 (279)
Q Consensus 266 ~~v~~~~~spdg~~ 279 (279)
..+..++|+|+|++
T Consensus 392 ~~~~~~~~~~~~~~ 405 (464)
T 3v7d_B 392 NLSAITTFYVSDNI 405 (464)
T ss_dssp TCCCEEEEEECSSE
T ss_pred CCccEEEEEeCCCE
Confidence 77888999999863
No 105
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=8e-27 Score=183.97 Aligned_cols=210 Identities=12% Similarity=0.182 Sum_probs=147.0
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEcc--CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+++||+.+..... .....+.+|.+.|.+++|+| ++++|++|+.||.|++||+.++......... ...
T Consensus 34 ~i~iw~~~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~--------~~~ 103 (351)
T 3f3f_A 34 HIKVFKLDKDTSNW--ELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRW--------NKL 103 (351)
T ss_dssp EEEEEEECSSSCCE--EEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSE--------EEE
T ss_pred eEEEEECCCCCCcc--eecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCc--------cee
Confidence 67888887654321 23336778999999999999 6999999999999999999875431110000 001
Q ss_pred eeeecCCCceEEEEeeCcccccCCC--CcEEEEecCCCcEEEEECCCCeeeEEEe-------------------------
Q 023672 113 SLVVTEGESVYDFCWFPHMSASDPT--SCVFASTTRDHPIHLWDATTGLLRCTYR------------------------- 165 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~--~~~l~s~~~d~~i~i~d~~~~~~~~~~~------------------------- 165 (279)
.....+...|.+++| +|+ +.+|++++.|+.|++||+++++.+..+.
T Consensus 104 ~~~~~~~~~v~~~~~-------~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (351)
T 3f3f_A 104 CTLNDSKGSLYSVKF-------APAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWC 176 (351)
T ss_dssp EEECCCSSCEEEEEE-------CCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEEC
T ss_pred eeecccCCceeEEEE-------cCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEec
Confidence 123356678999888 556 8899999999999999987654221110
Q ss_pred ------------------------------ccCccccccceeeEEECCCC----CEEEEe-cCCeEEEEEccCCCCceee
Q 023672 166 ------------------------------AYDAVDEITAAFSVAFNPTG----TKIFAG-YNKSVRVFDVHRPGRDFEK 210 (279)
Q Consensus 166 ------------------------------~~~~~~~~~~v~~~~~~~~~----~~l~~~-~d~~i~~~d~~~~~~~~~~ 210 (279)
......+...|.+++|+|++ ++|+++ .|+.|++||++.+......
T Consensus 177 p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 256 (351)
T 3f3f_A 177 PSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLAS 256 (351)
T ss_dssp CCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC-----
T ss_pred cCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCcccc
Confidence 00001233489999999998 778866 9999999999863111000
Q ss_pred --------------------------------------eeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 211 --------------------------------------YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 211 --------------------------------------~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
.......+.+|...|++++|+| ++.+|++|+.||.|++||+
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~-~~~~l~s~~~dg~v~iw~~ 335 (351)
T 3f3f_A 257 EESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNL-TGTILSSAGDDGKVRLWKA 335 (351)
T ss_dssp ----------------------------------CCSEEEEEEEEECTTSSCEEEEEECS-SSCCEEEEETTSCEEEEEE
T ss_pred CCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcC-CCCEEEEecCCCcEEEEec
Confidence 0011222368899999999999 8999999999999999999
Q ss_pred CCCeEEEEEe
Q 023672 253 DNMELLYVLH 262 (279)
Q Consensus 253 ~~~~~~~~~~ 262 (279)
.+++.+..+.
T Consensus 336 ~~~~~~~~~~ 345 (351)
T 3f3f_A 336 TYSNEFKCMS 345 (351)
T ss_dssp CTTSCEEEEE
T ss_pred CcCcchhhee
Confidence 9886554443
No 106
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.96 E-value=6.7e-27 Score=198.23 Aligned_cols=205 Identities=12% Similarity=0.107 Sum_probs=163.4
Q ss_pred eeeEecCCCC----cccceeeeeeccCCCCCc-eEEEEEcc--CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCC
Q 023672 35 PLIRFDVPPH----RTYHFYNQFRTSSIPNNF-LKGIKWSP--DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQ 107 (279)
Q Consensus 35 ~~~~~d~~~~----~~~~~~~~~~~~~~h~~~-v~~~~~~~--~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 107 (279)
.+.+||+.++ .... .+.+|.+. |++++|+| ++++|++|+.||.|++||+.++.......
T Consensus 40 ~v~v~~~~~~~~~~~~~~------~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~-------- 105 (615)
T 1pgu_A 40 SAFVRCLDDGDSKVPPVV------QFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVE-------- 105 (615)
T ss_dssp EEEEEECCSSCCSSCSEE------EECTTTTSCEEEEEECSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEE--------
T ss_pred eEEEEECCCCCCccccce------EEecCCCceEEEEEECcCCCCCEEEEecCCCEEEEEeCCCCccccccc--------
Confidence 5788998876 4443 67899999 99999999 99999999999999999997441100000
Q ss_pred CcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCC----CcEEEEECCCCeeeEEEeccCccccccceeeEEECC
Q 023672 108 DSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRD----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP 183 (279)
Q Consensus 108 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 183 (279)
.........+...|.+++| +|++++|++++.+ +.|.+|| .++....+..+.. .|.+++|+|
T Consensus 106 -~~~~~~~~~~~~~v~~~~~-------s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~~-----~v~~~~~~~ 170 (615)
T 1pgu_A 106 -VNVKSEFQVLAGPISDISW-------DFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHSQ-----RINACHLKQ 170 (615)
T ss_dssp -EEEEEEEECCSSCEEEEEE-------CTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCSS-----CEEEEEECS
T ss_pred -ccccchhhcccccEEEEEE-------eCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCCc-----cEEEEEECC
Confidence 0001122345678888877 7789999999987 6888888 5667777777665 899999999
Q ss_pred CCC-EEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCC---ceEEEEEccCC-CcEEEEEeCCCcEEEEecCCCeE
Q 023672 184 TGT-KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAG---IMSAIAFSPTH-TGMLAIGSYSQTSAIYREDNMEL 257 (279)
Q Consensus 184 ~~~-~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~sp~~-~~~l~~~~~dg~i~~wd~~~~~~ 257 (279)
++. .++++ .|+.|++||+.+. +....+ .+|.. .|.+++|+| + +.+|++++.||.|++||++++++
T Consensus 171 ~~~~~l~~~~~d~~v~vwd~~~~----~~~~~~----~~~~~~~~~v~~~~~~~-~~~~~l~~~~~dg~i~vwd~~~~~~ 241 (615)
T 1pgu_A 171 SRPMRSMTVGDDGSVVFYQGPPF----KFSASD----RTHHKQGSFVRDVEFSP-DSGEFVITVGSDRKISCFDGKSGEF 241 (615)
T ss_dssp SSSCEEEEEETTTEEEEEETTTB----EEEEEE----CSSSCTTCCEEEEEECS-TTCCEEEEEETTCCEEEEETTTCCE
T ss_pred CCCcEEEEEeCCCcEEEEeCCCc----ceeeee----cccCCCCceEEEEEECC-CCCCEEEEEeCCCeEEEEECCCCCE
Confidence 997 56655 9999999999873 333333 57777 899999999 7 99999999999999999999999
Q ss_pred EEEE-e---ecCCCEEEEEEccCCC
Q 023672 258 LYVL-H---GQEGGVTHVSKLSSAY 278 (279)
Q Consensus 258 ~~~~-~---~~~~~v~~~~~spdg~ 278 (279)
+..+ . .|...|.+++|+ +|+
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~-~~~ 265 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWL-DSQ 265 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEES-SSS
T ss_pred eEEecccccccCCceEEEEEc-CCC
Confidence 9998 6 899999999999 875
No 107
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=1e-26 Score=183.33 Aligned_cols=202 Identities=10% Similarity=0.036 Sum_probs=154.9
Q ss_pred eeeEecC-CCCcccceeeeeeccCC--CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCC---------Ccccccccccc
Q 023672 35 PLIRFDV-PPHRTYHFYNQFRTSSI--PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPE---------NGISYDVNACS 102 (279)
Q Consensus 35 ~~~~~d~-~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~---------~~~~~~~~~~~ 102 (279)
.+.+||+ .++... .+.+ |...|.+++|+| +++|++++.|+.|++||+.+ +...
T Consensus 80 ~i~~wd~~~~~~~~-------~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~------- 144 (342)
T 1yfq_A 80 EILKVDLIGSPSFQ-------ALTNNEANLGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNS------- 144 (342)
T ss_dssp CEEEECSSSSSSEE-------ECBSCCCCSCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCS-------
T ss_pred eEEEEEeccCCceE-------eccccCCCCceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCee-------
Confidence 5788888 766542 5677 999999999999 99999999999999999874 2111
Q ss_pred ccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCC-Ceee--EEEeccCccccccceeeE
Q 023672 103 LAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT-GLLR--CTYRAYDAVDEITAAFSV 179 (279)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~-~~~~--~~~~~~~~~~~~~~v~~~ 179 (279)
....+...+.+++| ++++ +++++.|+.|++||+++ +... .....+.. .+.++
T Consensus 145 -----------~~~~~~~~v~~~~~-------~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~-----~i~~i 199 (342)
T 1yfq_A 145 -----------NNTKVKNKIFTMDT-------NSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKY-----QIRDV 199 (342)
T ss_dssp -----------SSSSSCCCEEEEEE-------CSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSS-----CEEEE
T ss_pred -----------eEEeeCCceEEEEe-------cCCc--EEEEeCCCeEEEEECCccccccceeeecCCCC-----ceeEE
Confidence 11225678888888 4444 89999999999999998 5432 22223333 78999
Q ss_pred EECC-CCCEEEEe-cCCeEEEEEccCC-----CCceeeeeeccc--ccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEE
Q 023672 180 AFNP-TGTKIFAG-YNKSVRVFDVHRP-----GRDFEKYSTLKG--NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (279)
Q Consensus 180 ~~~~-~~~~l~~~-~d~~i~~~d~~~~-----~~~~~~~~~~~~--~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~w 250 (279)
+|+| ++++++++ .|+.|++||++.. ......+..... ...+|...|.+++|+| ++.+|++|+.||.|++|
T Consensus 200 ~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~-~~~~l~~~~~dg~i~vw 278 (342)
T 1yfq_A 200 ALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSP-RHKFLYTAGSDGIISCW 278 (342)
T ss_dssp EECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECT-TTCCEEEEETTSCEEEE
T ss_pred EECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcC-CCCEEEEecCCceEEEE
Confidence 9999 99999966 9999999999874 122222211100 0013455999999999 89999999999999999
Q ss_pred ecCCCeEEEEEeec-CCCEEEEEEccCCCC
Q 023672 251 REDNMELLYVLHGQ-EGGVTHVSKLSSAYT 279 (279)
Q Consensus 251 d~~~~~~~~~~~~~-~~~v~~~~~spdg~~ 279 (279)
|+.+++++..+.+| ..+|.+++ |||++
T Consensus 279 d~~~~~~~~~~~~~h~~~v~~~~--~~~~~ 306 (342)
T 1yfq_A 279 NLQTRKKIKNFAKFNEDSVVKIA--CSDNI 306 (342)
T ss_dssp ETTTTEEEEECCCCSSSEEEEEE--ECSSE
T ss_pred cCccHhHhhhhhcccCCCceEec--CCCCe
Confidence 99999999999998 99999999 88863
No 108
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=9.4e-27 Score=178.52 Aligned_cols=200 Identities=14% Similarity=0.015 Sum_probs=129.2
Q ss_pred CCceEEEEEccC----CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceee-----------ecCCCceEE
Q 023672 60 NNFLKGIKWSPD----GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV-----------VTEGESVYD 124 (279)
Q Consensus 60 ~~~v~~~~~~~~----~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~~~~~v~~ 124 (279)
.+.|+.++|+|| ++.+++++.+ +++|++.+++..... ...++..+.... ..++..+..
T Consensus 111 ~~~v~sla~spd~~~~~~~l~s~g~~--~~v~~l~~g~lv~ss-----~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~ 183 (356)
T 2w18_A 111 IREIRALFCSSDDESEKQVLLKSGNI--KAVLGLTKRRLVSSS-----GTLSDQQVEVMTFAEDGGGKENQFLMPPEETI 183 (356)
T ss_dssp EEEEEEECC------CCEEEEEEEEE--EEEEEETTTEEEEEE-----SSSTTCEEEEEEECTTSCEEEEEEECCCSSCE
T ss_pred ccceEEEEECCCccccccEEEeCCCe--EEEEecCCCcEEEec-----ccCCCCcEEEEEECCCCceeeeeccCCCceee
Confidence 347888888998 8888887743 667777654432110 001111121122 233334444
Q ss_pred EEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEE------------EEe-
Q 023672 125 FCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKI------------FAG- 191 (279)
Q Consensus 125 ~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l------------~~~- 191 (279)
++|+|- .-++..|++++.|++|+|||+.+++.+.++..+.. ....+.+++|+|+|.++ ++|
T Consensus 184 l~fs~~----~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~--~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs 257 (356)
T 2w18_A 184 LTFAEV----QGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS--YQASVCHKAYSEMGLLFIVLSHPCAKESESLRS 257 (356)
T ss_dssp EEEEEE----ETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----CCCEEEEEEETTEEEEEEC------------
T ss_pred EEeecc----CCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc--ceeeeEEEEECCCCCEEEEeccCCCcceeeccC
Confidence 444221 12678999999999999999999999999975432 11267788999999876 344
Q ss_pred cCCeEEEEEccCCCCceeeeeecccc-cCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEE-
Q 023672 192 YNKSVRVFDVHRPGRDFEKYSTLKGN-KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVT- 269 (279)
Q Consensus 192 ~d~~i~~~d~~~~~~~~~~~~~~~~~-~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~- 269 (279)
.|++|++||..++ +... .+... ..+|...+.+..+ ++.++++|+.|++|+|||+.+++++.++.+|...+.
T Consensus 258 ~D~tIklWd~~tg-k~l~---v~~~~~p~Gh~~~~lsg~~---sg~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs 330 (356)
T 2w18_A 258 PVFQLIVINPKTT-LSVG---VMLYCLPPGQAGRFLEGDV---KDHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWS 330 (356)
T ss_dssp CCEEEEEEETTTT-EEEE---EEEECCCTTCCCCEEEEEE---ETTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCC
T ss_pred CCcEEEEEECCCC-EEEE---EEEeeccCCCcceeEcccc---CCCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEE
Confidence 7899999999874 2221 11100 1466555444433 467899999999999999999999999999887655
Q ss_pred EEEEccCCCC
Q 023672 270 HVSKLSSAYT 279 (279)
Q Consensus 270 ~~~~spdg~~ 279 (279)
.++|||||++
T Consensus 331 ~vafSPDG~~ 340 (356)
T 2w18_A 331 FVKWSGTDSH 340 (356)
T ss_dssp EEEECSSSSE
T ss_pred EEEECCCCCE
Confidence 6899999974
No 109
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=5.3e-26 Score=185.24 Aligned_cols=188 Identities=17% Similarity=0.241 Sum_probs=153.4
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||..+++... .+.+|.+.|.+++| ++++|++|+.||+|++||+.++.... .
T Consensus 154 ~i~iwd~~~~~~~~------~~~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~-----------------~ 208 (435)
T 1p22_A 154 TIKIWDKNTLECKR------ILTGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLN-----------------T 208 (435)
T ss_dssp CEEEEESSSCCEEE------EECCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEE-----------------E
T ss_pred eEEEEeCCCCeEEE------EEcCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEE-----------------E
Confidence 46788887776654 67789999999999 78899999999999999998764321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeee---EEEeccCccccccceeeEEECCCCCEEEEe
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLR---CTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 191 (279)
...+...|.++.|+ +..+++|+.|+.|++||++++... ..+..+.. .|.+++| ++++++++
T Consensus 209 ~~~h~~~v~~l~~~---------~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~-----~v~~~~~--~~~~l~s~ 272 (435)
T 1p22_A 209 LIHHCEAVLHLRFN---------NGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRA-----AVNVVDF--DDKYIVSA 272 (435)
T ss_dssp ECCCCSCEEEEECC---------TTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSS-----CEEEEEE--ETTEEEEE
T ss_pred EcCCCCcEEEEEEc---------CCEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCC-----cEEEEEe--CCCEEEEE
Confidence 23466788888872 449999999999999999987655 44555554 8889998 67788866
Q ss_pred -cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEE
Q 023672 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH 270 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 270 (279)
.|+.|++||++++ +....+ .+|...|.+++|++ .++++|+.||.|++||+++++++..+.+|...|.+
T Consensus 273 ~~dg~i~vwd~~~~----~~~~~~----~~~~~~v~~~~~~~---~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~ 341 (435)
T 1p22_A 273 SGDRTIKVWNTSTC----EFVRTL----NGHKRGIACLQYRD---RLVVSGSSDNTIRLWDIECGACLRVLEGHEELVRC 341 (435)
T ss_dssp ETTSEEEEEETTTC----CEEEEE----ECCSSCEEEEEEET---TEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEE
T ss_pred eCCCeEEEEECCcC----cEEEEE----cCCCCcEEEEEeCC---CEEEEEeCCCeEEEEECCCCCEEEEEeCCcCcEEE
Confidence 9999999999984 233333 57888999999854 69999999999999999999999999999999999
Q ss_pred EEEc
Q 023672 271 VSKL 274 (279)
Q Consensus 271 ~~~s 274 (279)
++|.
T Consensus 342 ~~~~ 345 (435)
T 1p22_A 342 IRFD 345 (435)
T ss_dssp EECC
T ss_pred EEec
Confidence 9983
No 110
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.7e-26 Score=186.32 Aligned_cols=210 Identities=10% Similarity=0.051 Sum_probs=158.5
Q ss_pred eeeEecCC--CCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVP--PHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~--~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+.+||+. ++.....+.. ..|...|.+++|+|++++|++|+.||.|++|++.++..... ..
T Consensus 126 ~v~iwd~~~~~~~~~~~~~~----~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~-------------~~ 188 (450)
T 2vdu_B 126 SLLVFDVDKTSKNVLKLRKR----FCFSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKF-------------TQ 188 (450)
T ss_dssp EEEEEEECSSSSSCEEEEEE----EECSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSC-------------CC
T ss_pred eEEEEECcCCCCceeeeeec----ccCCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccc-------------cc
Confidence 56778877 6655442211 25778999999999999999999999999999986543210 00
Q ss_pred eeeecCCCceEEEEeeCcccccCCC---CcEEEEecCCCcEEEEECCCCeeeEEE-eccCccccccceeeEEECCCCCEE
Q 023672 113 SLVVTEGESVYDFCWFPHMSASDPT---SCVFASTTRDHPIHLWDATTGLLRCTY-RAYDAVDEITAAFSVAFNPTGTKI 188 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~---~~~l~s~~~d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~l 188 (279)
.....|...|.+++| +|+ +.+|++++.|+.|++||+++++.+..+ ..+.. .|.+++|+ ++++|
T Consensus 189 ~~~~~h~~~v~~~~~-------sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~-----~v~~~~~s-d~~~l 255 (450)
T 2vdu_B 189 EPILGHVSMLTDVHL-------IKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKH-----FVSSICCG-KDYLL 255 (450)
T ss_dssp CCSEECSSCEEEEEE-------EECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSS-----CEEEEEEC-STTEE
T ss_pred eeeecccCceEEEEE-------cCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCC-----ceEEEEEC-CCCEE
Confidence 022346678999988 556 889999999999999999998877764 35554 89999999 99999
Q ss_pred EEe-cCCeEEEEEccCCCCceeeeeecc------------------cccCCCCCceEEEEEccCCCcEEEEEe-CCCcEE
Q 023672 189 FAG-YNKSVRVFDVHRPGRDFEKYSTLK------------------GNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSA 248 (279)
Q Consensus 189 ~~~-~d~~i~~~d~~~~~~~~~~~~~~~------------------~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~ 248 (279)
+++ .|+.|++||++++ +....+.... .........|.+++|+| ++.+|++++ .|+.|+
T Consensus 256 ~s~~~d~~v~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~-~~~~l~~~~~~d~~i~ 333 (450)
T 2vdu_B 256 LSAGGDDKIFAWDWKTG-KNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSK-NLPFVAFFVEATKCII 333 (450)
T ss_dssp EEEESSSEEEEEETTTC-CEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECS-SSSEEEEEETTCSEEE
T ss_pred EEEeCCCeEEEEECCCC-cEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeC-CCCEEEEEECCCCeEE
Confidence 966 9999999999984 3322221100 00012345789999999 888888888 899999
Q ss_pred EEec--CCC---eEEEEEeecCCCEEEEEEccCC
Q 023672 249 IYRE--DNM---ELLYVLHGQEGGVTHVSKLSSA 277 (279)
Q Consensus 249 ~wd~--~~~---~~~~~~~~~~~~v~~~~~spdg 277 (279)
+||+ .++ +.+..+..| +.|.+++|+|++
T Consensus 334 iw~~~~~~~~~l~~~~~~~~~-~~v~~~~~~~~~ 366 (450)
T 2vdu_B 334 ILEMSEKQKGDLALKQIITFP-YNVISLSAHNDE 366 (450)
T ss_dssp EEEECSSSTTCEEEEEEEECS-SCEEEEEEETTE
T ss_pred EEEeccCCCCceeeccEeccC-CceEEEEecCCc
Confidence 9999 565 677888887 889999999965
No 111
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=5.7e-26 Score=185.58 Aligned_cols=212 Identities=16% Similarity=0.236 Sum_probs=150.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccc-------------
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNAC------------- 101 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~------------- 101 (279)
.+.+||+.+++... .+.+|...|.+++|+ ++.|++|+.||+|++||+.++.........
T Consensus 180 ~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~ 251 (445)
T 2ovr_B 180 TLKVWNAETGECIH------TLYGHTSTVRCMHLH--EKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRR 251 (445)
T ss_dssp CEEEEETTTTEEEE------EECCCSSCEEEEEEE--TTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSC
T ss_pred eEEEEECCcCcEEE------EECCCCCcEEEEEec--CCEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCE
Confidence 57777777777777 455677777777775 456777777777777777766543221100
Q ss_pred cccCCCCcccce----------eeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccc
Q 023672 102 SLAKDQDSYEAS----------LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD 171 (279)
Q Consensus 102 ~~~~~~~~~~~~----------~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~ 171 (279)
......+..+.. ....+...|.++.| ++.++++++.|+.|++||+++++.+..+..+..
T Consensus 252 l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~---------~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~-- 320 (445)
T 2ovr_B 252 VVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF---------DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS-- 320 (445)
T ss_dssp EEEEETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE---------CSSEEEEEETTSCEEEEETTTCCEEEEECCCCS--
T ss_pred EEEEcCCCEEEEEECCCCcEeEEecCCCCceEEEEE---------CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc--
Confidence 000001111111 11224445666655 678999999999999999999999988887765
Q ss_pred cccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEE
Q 023672 172 EITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (279)
Q Consensus 172 ~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~w 250 (279)
.+.++.++ +++++++ .|+.|++||++++ .. ...+.. ...|...|.+++|++ .+|++|+.||.|++|
T Consensus 321 ---~v~~~~~~--~~~l~~~~~dg~i~vwd~~~~-~~---~~~~~~-~~~~~~~v~~~~~~~---~~l~s~~~dg~v~iw 387 (445)
T 2ovr_B 321 ---LTSGMELK--DNILVSGNADSTVKIWDIKTG-QC---LQTLQG-PNKHQSAVTCLQFNK---NFVITSSDDGTVKLW 387 (445)
T ss_dssp ---CEEEEEEE--TTEEEEEETTSCEEEEETTTC-CE---EEEECS-TTSCSSCEEEEEECS---SEEEEEETTSEEEEE
T ss_pred ---cEEEEEEe--CCEEEEEeCCCeEEEEECCCC-cE---EEEEcc-CCCCCCCEEEEEECC---CEEEEEeCCCeEEEE
Confidence 67777764 5677766 9999999999873 22 223311 135788999999965 689999999999999
Q ss_pred ecCCCeEEEEE-----eecCCCEEEEEEccCCC
Q 023672 251 REDNMELLYVL-----HGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 251 d~~~~~~~~~~-----~~~~~~v~~~~~spdg~ 278 (279)
|+.+++.+..+ ..|.+.|++++|+|+|.
T Consensus 388 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~ 420 (445)
T 2ovr_B 388 DLKTGEFIRNLVTLESGGSGGVVWRIRASNTKL 420 (445)
T ss_dssp ETTTCCEEEEEEECTTGGGTCEEEEEEECSSEE
T ss_pred ECCCCceeeeeeccccCCCCceEEEEEecCCEE
Confidence 99999999888 46788999999999985
No 112
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.95 E-value=2.7e-26 Score=201.55 Aligned_cols=201 Identities=7% Similarity=0.119 Sum_probs=150.0
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++|+........ ...|...|.+++|+| +++|++++.|++|+|||+.+++...
T Consensus 40 ~I~lw~~~~~~~~~-------~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~~~~~~------------------ 93 (902)
T 2oaj_A 40 EVHIYGQQQVEVVI-------KLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYSQKVLT------------------ 93 (902)
T ss_dssp EEEEECSTTCEEEE-------ECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTTCSEEE------------------
T ss_pred EEEEEeCCCcEEEE-------EcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCCCcEEE------------------
Confidence 67888877655432 234788999999999 8899999999999999998764321
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEec-------cCccccccceeeEEECCCC-C
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRA-------YDAVDEITAAFSVAFNPTG-T 186 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~-------~~~~~~~~~v~~~~~~~~~-~ 186 (279)
...+...|.+++| +|++.+|++|+.||.|++||+++++.. .+.. .....+...|.+++|+|++ .
T Consensus 94 ~~~~~~~V~~v~~-------sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~ 165 (902)
T 2oaj_A 94 TVFVPGKITSIDT-------DASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFFPAARLSPIVSIQWNPRDIG 165 (902)
T ss_dssp EEECSSCEEEEEC-------CTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTCSSSCCCCCCEEEEETTEEE
T ss_pred EEcCCCCEEEEEE-------CCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccccccCCCCeEEEEEccCCCC
Confidence 1124457888876 788999999999999999999988753 2221 1112233489999999974 5
Q ss_pred EEEEe-cCCeEEEEEccCCCCceeeeeecccc--------------cCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEe
Q 023672 187 KIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGN--------------KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYR 251 (279)
Q Consensus 187 ~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~--------------~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd 251 (279)
.+++| .|+.| +||++++ + ....+... ...|...|.+++|+| ++.+|++|+.||.|++||
T Consensus 166 ~l~~g~~dg~v-lWd~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fsp-dg~~lasgs~Dg~i~lWd 239 (902)
T 2oaj_A 166 TVLISYEYVTL-TYSLVEN-E---IKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHP-NSLHIITIHEDNSLVFWD 239 (902)
T ss_dssp EEEEECSSCEE-EEETTTT-E---EEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECT-TSSEEEEEETTCCEEEEE
T ss_pred EEEEEeCCCcE-EEECCCC-c---eEEEEecccCCcCCCcccccccccccCCCeEEEEEcC-CCCEEEEEECCCeEEEEE
Confidence 66666 99999 9999973 2 22222111 134567899999999 899999999999999999
Q ss_pred cCCCeEEEE--E---ee-------------cCCCEEEEEEcc
Q 023672 252 EDNMELLYV--L---HG-------------QEGGVTHVSKLS 275 (279)
Q Consensus 252 ~~~~~~~~~--~---~~-------------~~~~v~~~~~sp 275 (279)
+++++++.. + .. |..+|++++|+|
T Consensus 240 ~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~ 281 (902)
T 2oaj_A 240 ANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMC 281 (902)
T ss_dssp TTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEE
T ss_pred CCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEe
Confidence 999988754 2 11 245799999964
No 113
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=2.2e-26 Score=181.47 Aligned_cols=189 Identities=12% Similarity=0.090 Sum_probs=147.4
Q ss_pred eccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 54 RTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 54 ~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
....+|.+.|++++|+|++++|++++.||.|++|++.++... ........+...|.+++|
T Consensus 5 ~~~~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~--------------~~~~~~~~~~~~v~~~~~------ 64 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKN--------------VDLLQSLRYKHPLLCCNF------ 64 (342)
T ss_dssp ECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTE--------------EEEEEEEECSSCEEEEEE------
T ss_pred ecccCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCcc--------------ccceeeeecCCceEEEEE------
Confidence 356789999999999999999999999999999999865310 001133467778999988
Q ss_pred cCCCCc-EEEEecCCCcEEEEEC-CCCeeeEEEec--cCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCC-c
Q 023672 134 SDPTSC-VFASTTRDHPIHLWDA-TTGLLRCTYRA--YDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGR-D 207 (279)
Q Consensus 134 ~~~~~~-~l~s~~~d~~i~i~d~-~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~-~ 207 (279)
+|++. +|++++.|+.|++||+ .+++. ..+.. +.. .|.+++|+| +..++++ .|+.|++||+++... .
T Consensus 65 -~~~~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~~~~~~~-----~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~ 136 (342)
T 1yfq_A 65 -IDNTDLQIYVGTVQGEILKVDLIGSPSF-QALTNNEANL-----GICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGV 136 (342)
T ss_dssp -EESSSEEEEEEETTSCEEEECSSSSSSE-EECBSCCCCS-----CEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBC
T ss_pred -CCCCCcEEEEEcCCCeEEEEEeccCCce-EeccccCCCC-----ceEEEEeCC-CCEEEEEcCCCeEEEEccccccccc
Confidence 56789 9999999999999999 87754 45554 544 899999999 8888865 999999999975110 0
Q ss_pred ----eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCC-Ce--EEEEEeecCCCEEEEEEcc-CCC
Q 023672 208 ----FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-ME--LLYVLHGQEGGVTHVSKLS-SAY 278 (279)
Q Consensus 208 ----~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~-~~--~~~~~~~~~~~v~~~~~sp-dg~ 278 (279)
.+....+ .|...+.+++|+| ++ +++++.|+.|++||+++ +. .......|...|.+++|+| +|+
T Consensus 137 ~~~~~~~~~~~-----~~~~~v~~~~~~~-~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~ 207 (342)
T 1yfq_A 137 IAVKNLNSNNT-----KVKNKIFTMDTNS-SR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQE 207 (342)
T ss_dssp EEEEESCSSSS-----SSCCCEEEEEECS-SE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGC
T ss_pred ccccCCeeeEE-----eeCCceEEEEecC-Cc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCC
Confidence 0111122 3778999999999 65 89999999999999998 54 3334556788999999999 875
No 114
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.95 E-value=1.3e-25 Score=182.08 Aligned_cols=189 Identities=17% Similarity=0.316 Sum_probs=138.6
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|...+.++.|+|+++++++++.|+.+++|+..++..... .......+...|..+.|+|.
T Consensus 225 ~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~-------------~~~~~~~~~~~V~~~~~~p~---- 287 (420)
T 4gga_A 225 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWV-------------PLQTFTQHQGAVKAVAWCPW---- 287 (420)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSC-------------CSEEECCCSSCEEEEEECTT----
T ss_pred EecccccceeeeeecCCCCeeeeeeccccceEEeeccccccce-------------eeeeecccCCceeeeeeCCC----
Confidence 5678999999999999999999999999999999986542111 11133456678999988654
Q ss_pred CCCCcEEEE--ecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE--e-cCCeEEEEEccCCCCcee
Q 023672 135 DPTSCVFAS--TTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA--G-YNKSVRVFDVHRPGRDFE 209 (279)
Q Consensus 135 ~~~~~~l~s--~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~--~-~d~~i~~~d~~~~~~~~~ 209 (279)
+...+++ |+.|++|++||+.+++....+..+. .+.++.|+|+++.+++ | .|+.|+|||+.++ +
T Consensus 288 --~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~~------~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~----~ 355 (420)
T 4gga_A 288 --QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS------QVCSILWSPHYKELISGHGFAQNQLVIWKYPTM----A 355 (420)
T ss_dssp --CTTEEEEEECTTTCEEEEEETTTTEEEEEEECSS------CEEEEEEETTTTEEEEEECTTTCCEEEEETTTC----C
T ss_pred --cccEEEEEeecCCCEEEEEeCCccccceeecccc------ceeeeeecCCCCeEEEEEecCCCEEEEEECCCC----c
Confidence 3345554 5689999999999999988887665 7889999999988873 4 6899999999884 3
Q ss_pred eeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCC
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSA 277 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg 277 (279)
.+..+ .+|.+.|.+++|+| ++.+|++|+.|++|+|||+.+..+......+...+....|..+|
T Consensus 356 ~v~~l----~gH~~~V~~l~~sp-dg~~l~S~s~D~tvriWdv~~~~~~~~~~~~~~~~~~~s~~~~g 418 (420)
T 4gga_A 356 KVAEL----KGHTSRVLSLTMSP-DGATVASAAADETLRLWRCFELDPARRREREKASAAKSSLIHQG 418 (420)
T ss_dssp EEEEE----CCCSSCEEEEEECT-TSSCEEEEETTTEEEEECCSCSSCC-------------------
T ss_pred EEEEE----cCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEECCCCCccchhhhccCCccccccCCCC
Confidence 33444 68999999999999 89999999999999999998877766666555555444554443
No 115
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=4.4e-26 Score=174.81 Aligned_cols=164 Identities=9% Similarity=0.003 Sum_probs=110.8
Q ss_pred ccCCCCCceEEEEEcc---CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecC--CCceEEEEeeC
Q 023672 55 TSSIPNNFLKGIKWSP---DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTE--GESVYDFCWFP 129 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~---~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~ 129 (279)
.+.+|...+..++|+| ++.+|++|+.|++|+|||+.+++..... ..++ ...+..++|+
T Consensus 173 s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL----------------~g~~~~v~~v~~vafS- 235 (356)
T 2w18_A 173 NQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKM----------------HIDDSYQASVCHKAYS- 235 (356)
T ss_dssp EEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEE----------------ECCC---CCCEEEEEE-
T ss_pred eeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEE----------------cCCCcceeeeEEEEEC-
Confidence 4556777788888888 6688999999999999999987653321 1111 1244555554
Q ss_pred cccccCCCCcE------------EEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeE
Q 023672 130 HMSASDPTSCV------------FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196 (279)
Q Consensus 130 ~~~~~~~~~~~------------l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i 196 (279)
|++.+ +++|+.|++|++||..+++.+..+......++...+.+..+ ++.+++++ .|++|
T Consensus 236 ------pdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~--sg~~lASgS~DgTI 307 (356)
T 2w18_A 236 ------EMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDV--KDHCAAAILTSGTI 307 (356)
T ss_dssp ------ETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEE--ETTEEEEEETTSCE
T ss_pred ------CCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEcccc--CCCEEEEEcCCCcE
Confidence 44544 47788999999999999988776532111011112333333 37788876 89999
Q ss_pred EEEEccCCCCceeeeeecccccCCCCCceE-EEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 197 RVFDVHRPGRDFEKYSTLKGNKEGQAGIMS-AIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 197 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~-~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
+|||+.++ +...++ .+|...+. +++|+| ++.+|++|+.|++|+|||+
T Consensus 308 kIWDl~tG----k~l~tL----~gH~~~vvs~vafSP-DG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 308 AIWDLLLG----QCTALL----PPVSDQHWSFVKWSG-TDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEEETTTC----SEEEEE----CCC--CCCCEEEECS-SSSEEEEECTTSCEEEEEE
T ss_pred EEEECCCC----cEEEEe----cCCCCCeEEEEEECC-CCCEEEEEECCCcEEEecC
Confidence 99999984 344444 57776555 689999 9999999999999999995
No 116
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=1.4e-25 Score=182.75 Aligned_cols=190 Identities=15% Similarity=0.242 Sum_probs=155.6
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.+++... .+.+|.+.|.+++|++ ..|++|+.||.|++||+.++.... ....
T Consensus 194 ~i~vwd~~~~~~~~------~~~~h~~~v~~l~~~~--~~l~s~s~dg~i~vwd~~~~~~~~--------------~~~~ 251 (435)
T 1p22_A 194 TVRVWDVNTGEMLN------TLIHHCEAVLHLRFNN--GMMVTCSKDRSIAVWDMASPTDIT--------------LRRV 251 (435)
T ss_dssp CEEEEESSSCCEEE------EECCCCSCEEEEECCT--TEEEEEETTSCEEEEECSSSSCCE--------------EEEE
T ss_pred eEEEEECCCCcEEE------EEcCCCCcEEEEEEcC--CEEEEeeCCCcEEEEeCCCCCCce--------------eeeE
Confidence 46778887776654 6778999999999974 589999999999999998653211 0113
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...+...|.++.| ++.++++|+.|+.|++||+++++.+..+..+.. .|.++.|+ +.++++| .|
T Consensus 252 ~~~~~~~v~~~~~---------~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~-----~v~~~~~~--~~~l~~g~~d 315 (435)
T 1p22_A 252 LVGHRAAVNVVDF---------DDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR-----GIACLQYR--DRLVVSGSSD 315 (435)
T ss_dssp ECCCSSCEEEEEE---------ETTEEEEEETTSEEEEEETTTCCEEEEEECCSS-----CEEEEEEE--TTEEEEEETT
T ss_pred ecCCCCcEEEEEe---------CCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCC-----cEEEEEeC--CCEEEEEeCC
Confidence 4456678888877 567999999999999999999999999887775 88899884 5677765 99
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCe---------EEEEEeec
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME---------LLYVLHGQ 264 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~---------~~~~~~~~ 264 (279)
+.|++||++++ .....+ .+|...|.+++| ++.+|++|+.||.|++||++++. ++..+.+|
T Consensus 316 g~i~iwd~~~~----~~~~~~----~~h~~~v~~~~~---~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h 384 (435)
T 1p22_A 316 NTIRLWDIECG----ACLRVL----EGHEELVRCIRF---DNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEH 384 (435)
T ss_dssp SCEEEEETTTC----CEEEEE----CCCSSCEEEEEC---CSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCC
T ss_pred CeEEEEECCCC----CEEEEE----eCCcCcEEEEEe---cCCEEEEEeCCCcEEEEECCCCCCccccccchheeeccCC
Confidence 99999999984 333344 678899999998 45789999999999999998776 88899999
Q ss_pred CCCEEEEEE
Q 023672 265 EGGVTHVSK 273 (279)
Q Consensus 265 ~~~v~~~~~ 273 (279)
.+.|.+++|
T Consensus 385 ~~~v~~l~~ 393 (435)
T 1p22_A 385 SGRVFRLQF 393 (435)
T ss_dssp SSCCCCEEE
T ss_pred CCCeEEEEe
Confidence 999999999
No 117
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.95 E-value=6.5e-25 Score=179.33 Aligned_cols=189 Identities=16% Similarity=0.222 Sum_probs=157.4
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.+++... .+.+|.+.|.+++|+ +++|++|+.||+|++||+.++.... .
T Consensus 140 ~i~vwd~~~~~~~~------~~~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~-----------------~ 194 (445)
T 2ovr_B 140 TLKVWSAVTGKCLR------TLVGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIH-----------------T 194 (445)
T ss_dssp CEEEEETTTCCEEE------ECCCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEE-----------------E
T ss_pred cEEEEECCCCcEEE------EEcCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEE-----------------E
Confidence 56788888777654 678999999999998 5699999999999999998764321 2
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
...|...|.++.| ++..+++|+.|+.|++||+++++.+..+..+.. .|.+++| ++.+++++ .|
T Consensus 195 ~~~h~~~v~~~~~---------~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~-----~v~~~~~--~~~~l~~~~~d 258 (445)
T 2ovr_B 195 LYGHTSTVRCMHL---------HEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA-----AVRCVQY--DGRRVVSGAYD 258 (445)
T ss_dssp ECCCSSCEEEEEE---------ETTEEEEEETTSEEEEEESSSCCEEEEEECCSS-----CEEEEEE--CSSCEEEEETT
T ss_pred ECCCCCcEEEEEe---------cCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc-----cEEEEEE--CCCEEEEEcCC
Confidence 2346678888887 345899999999999999999999988887776 8999999 66777765 99
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
+.|++||++++ .....+ .+|...|.+++| ++.++++|+.||.|++||+++++++..+.+|...+.++.+
T Consensus 259 g~i~iwd~~~~----~~~~~~----~~~~~~v~~~~~---~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~ 327 (445)
T 2ovr_B 259 FMVKVWDPETE----TCLHTL----QGHTNRVYSLQF---DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMEL 327 (445)
T ss_dssp SCEEEEEGGGT----EEEEEE----CCCSSCEEEEEE---CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEE
T ss_pred CEEEEEECCCC----cEeEEe----cCCCCceEEEEE---CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcccEEEEEE
Confidence 99999999874 333344 578889999999 4578999999999999999999999999999999998887
Q ss_pred cc
Q 023672 274 LS 275 (279)
Q Consensus 274 sp 275 (279)
++
T Consensus 328 ~~ 329 (445)
T 2ovr_B 328 KD 329 (445)
T ss_dssp ET
T ss_pred eC
Confidence 54
No 118
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.95 E-value=9.7e-26 Score=191.09 Aligned_cols=187 Identities=11% Similarity=0.134 Sum_probs=151.9
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCc-eEEEEeeCcccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGES-VYDFCWFPHMSA 133 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~~~~~~~~~~~ 133 (279)
....|.+.|.+++|+|++++|++++ ++.|.|||+.++.... ........|... |.+++|
T Consensus 13 ~~~~~~~~v~~~~~spdg~~l~~~~-~~~v~v~~~~~~~~~~-------------~~~~~~~~h~~~~v~~~~~------ 72 (615)
T 1pgu_A 13 QPSTQRNFTTHLSYDPTTNAIAYPC-GKSAFVRCLDDGDSKV-------------PPVVQFTGHGSSVVTTVKF------ 72 (615)
T ss_dssp CCCCCTTCCCCCEEETTTTEEEEEE-TTEEEEEECCSSCCSS-------------CSEEEECTTTTSCEEEEEE------
T ss_pred CCCCccCceeEEEECCCCCEEEEec-CCeEEEEECCCCCCcc-------------ccceEEecCCCceEEEEEE------
Confidence 3456889999999999999999998 8899999998651000 001133456677 999987
Q ss_pred cCC--CCcEEEEecCCCcEEEEECCCC--------eeeEEEeccCccccccceeeEEECCCCCEEEEe-cC----CeEEE
Q 023672 134 SDP--TSCVFASTTRDHPIHLWDATTG--------LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN----KSVRV 198 (279)
Q Consensus 134 ~~~--~~~~l~s~~~d~~i~i~d~~~~--------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d----~~i~~ 198 (279)
+| ++++|++++.|+.|++||+.++ +....+..+.. .|.+++|+|++++++++ .+ +.|++
T Consensus 73 -sp~~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~-----~v~~~~~s~~~~~l~~~~~~~~~~~~v~~ 146 (615)
T 1pgu_A 73 -SPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAG-----PISDISWDFEGRRLCVVGEGRDNFGVFIS 146 (615)
T ss_dssp -CSSTTCCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSS-----CEEEEEECTTSSEEEEEECCSSCSEEEEE
T ss_pred -CcCCCCCEEEEecCCCEEEEEeCCCCcccccccccccchhhcccc-----cEEEEEEeCCCCEEEEeccCCCCccEEEE
Confidence 77 8999999999999999999755 55666665554 89999999999999965 55 68888
Q ss_pred EEccCCCCceeeeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEecCCCeEEEEEeecCC---CEEEEEEc
Q 023672 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDNMELLYVLHGQEG---GVTHVSKL 274 (279)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~---~v~~~~~s 274 (279)
||.. .....+ .+|...|.+++|+| ++. +|++++.|+.|++||+.+++++..+.+|.. .|.+++|+
T Consensus 147 ~d~~------~~~~~~----~~~~~~v~~~~~~~-~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 215 (615)
T 1pgu_A 147 WDSG------NSLGEV----SGHSQRINACHLKQ-SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 215 (615)
T ss_dssp TTTC------CEEEEC----CSCSSCEEEEEECS-SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred EECC------Ccceee----ecCCccEEEEEECC-CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEEC
Confidence 8832 222333 68899999999999 665 899999999999999999999999999999 99999999
Q ss_pred cC-CC
Q 023672 275 SS-AY 278 (279)
Q Consensus 275 pd-g~ 278 (279)
|+ |+
T Consensus 216 ~~~~~ 220 (615)
T 1pgu_A 216 PDSGE 220 (615)
T ss_dssp STTCC
T ss_pred CCCCC
Confidence 99 76
No 119
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=2.4e-26 Score=184.76 Aligned_cols=204 Identities=14% Similarity=0.043 Sum_probs=128.1
Q ss_pred CCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc-CC
Q 023672 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS-DP 136 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~ 136 (279)
.|...+....+.+++.+|++|+.|++|+|||+.++....... .....+|.+.|.+++|+|..... ..
T Consensus 87 ~~~~~~~~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~------------~~~~~gH~~~v~~v~~~p~~~~~~~~ 154 (393)
T 4gq1_A 87 LHDGDGNVNSSPVYSLFLACVCQDNTVRLIITKNETIITQHV------------LGGKSGHHNFVNDIDIADVYSADNRL 154 (393)
T ss_dssp ----------CCEEEEEEEEEETTSCEEEEEEETTEEEEEEE------------ECTTTSCSSCEEEEEEEEEECTTCSE
T ss_pred ccCCCcceeecCCCCCEEEEEeCCCcEEEEECCCCccceeee------------ecccCCCCCceEEEEEccccccccCC
Confidence 344445555556677889999999999999998764321100 00234577899999998753322 33
Q ss_pred CCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCC-EEEEe-cCCeEEEEEccCCCCceeeee--
Q 023672 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT-KIFAG-YNKSVRVFDVHRPGRDFEKYS-- 212 (279)
Q Consensus 137 ~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~-~d~~i~~~d~~~~~~~~~~~~-- 212 (279)
++++|++|+.|++|+|||++++.....+..+.. .+.+++|+|++. +|+++ .|+.|++||++++........
T Consensus 155 d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~-----~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~ 229 (393)
T 4gq1_A 155 AEQVIASVGDDCTLIIWRLTDEGPILAGYPLSS-----PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTE 229 (393)
T ss_dssp EEEEEEEEETTSEEEEEEEETTEEEEEEEECSS-----CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC---------
T ss_pred CCCEEEEEECCCeEEEEECCCCceeeeecCCCC-----CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccC
Confidence 789999999999999999998887777766665 899999999875 66666 999999999987432211100
Q ss_pred ---------------ecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCC
Q 023672 213 ---------------TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSA 277 (279)
Q Consensus 213 ---------------~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg 277 (279)
.......+|...+.++.|++.++..|++++.|+.+++||+.+++....+..|...+..+.++|++
T Consensus 230 ~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~ 309 (393)
T 4gq1_A 230 LVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNV 309 (393)
T ss_dssp -CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC-------------------CCSCSE
T ss_pred CcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccc
Confidence 00112246788899999973389999999999999999999998888888888888887777765
Q ss_pred C
Q 023672 278 Y 278 (279)
Q Consensus 278 ~ 278 (279)
+
T Consensus 310 ~ 310 (393)
T 4gq1_A 310 Q 310 (393)
T ss_dssp E
T ss_pred c
Confidence 3
No 120
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=4.9e-24 Score=171.16 Aligned_cols=196 Identities=15% Similarity=0.211 Sum_probs=150.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeE-EEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||+.+++... .+.+|. .+.+++|+|++++| ++++.|+.|++||+.+++...
T Consensus 13 ~v~v~d~~~~~~~~------~~~~~~-~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~----------------- 68 (391)
T 1l0q_A 13 NISVIDVTSNKVTA------TIPVGS-NPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA----------------- 68 (391)
T ss_dssp EEEEEETTTTEEEE------EEECSS-SEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEE-----------------
T ss_pred EEEEEECCCCeEEE------EeecCC-CcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEE-----------------
Confidence 57889998887665 344454 48999999999977 677789999999998764321
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEE-EecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFA-STTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG 191 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~ 191 (279)
.......+..++| +|++++|+ +++.++.|++||+.+++.+..+..+. .+.+++|+|+++.++ ++
T Consensus 69 -~~~~~~~v~~~~~-------spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~------~~~~~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 69 -TVPAGSSPQGVAV-------SPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK------SPLGLALSPDGKKLYVTN 134 (391)
T ss_dssp -EEECSSSEEEEEE-------CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS------SEEEEEECTTSSEEEEEE
T ss_pred -EEECCCCccceEE-------CCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC------CcceEEECCCCCEEEEEe
Confidence 1222337777766 77888775 55677999999999999888877554 678999999999874 66
Q ss_pred -cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEE-EEEeCCCcEEEEecCCCeEEEEEeecCCCEE
Q 023672 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGML-AIGSYSQTSAIYREDNMELLYVLHGQEGGVT 269 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l-~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~ 269 (279)
.++.|++||+.++ +....+ .. ...+.+++|+| ++..| ++++.++.|++||+++++.+..+. +...+.
T Consensus 135 ~~~~~v~~~d~~~~----~~~~~~----~~-~~~~~~~~~~~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~ 203 (391)
T 1l0q_A 135 NGDKTVSVINTVTK----AVINTV----SV-GRSPKGIAVTP-DGTKVYVANFDSMSISVIDTVTNSVIDTVK-VEAAPS 203 (391)
T ss_dssp TTTTEEEEEETTTT----EEEEEE----EC-CSSEEEEEECT-TSSEEEEEETTTTEEEEEETTTTEEEEEEE-CSSEEE
T ss_pred CCCCEEEEEECCCC----cEEEEE----ec-CCCcceEEECC-CCCEEEEEeCCCCEEEEEECCCCeEEEEEe-cCCCcc
Confidence 7999999999874 222233 22 24578999999 66655 778889999999999999887776 556889
Q ss_pred EEEEccCCCC
Q 023672 270 HVSKLSSAYT 279 (279)
Q Consensus 270 ~~~~spdg~~ 279 (279)
+++|+|+|++
T Consensus 204 ~~~~~~~g~~ 213 (391)
T 1l0q_A 204 GIAVNPEGTK 213 (391)
T ss_dssp EEEECTTSSE
T ss_pred ceEECCCCCE
Confidence 9999999863
No 121
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=1e-23 Score=169.36 Aligned_cols=196 Identities=17% Similarity=0.217 Sum_probs=152.1
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||+.+++... .+..| ..|.+++|+|++++|+ +++.|+.|++||+.+++...
T Consensus 55 ~i~v~d~~~~~~~~------~~~~~-~~v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~----------------- 110 (391)
T 1l0q_A 55 DVSIIDTATNNVIA------TVPAG-SSPQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAG----------------- 110 (391)
T ss_dssp EEEEEETTTTEEEE------EEECS-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE-----------------
T ss_pred eEEEEECCCCeEEE------EEECC-CCccceEECCCCCEEEEEECCCCEEEEEECCCCeEEE-----------------
Confidence 57889988877654 23333 3899999999999875 55567999999998764321
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEE-EEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVF-ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG 191 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~ 191 (279)
.......+..++| +|+++.+ ++++.++.|++||+.+++.+..+..+. .+.+++|+|+++.++ ++
T Consensus 111 -~~~~~~~~~~~~~-------s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~------~~~~~~~~~dg~~l~~~~ 176 (391)
T 1l0q_A 111 -TVKTGKSPLGLAL-------SPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGR------SPKGIAVTPDGTKVYVAN 176 (391)
T ss_dssp -EEECSSSEEEEEE-------CTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCS------SEEEEEECTTSSEEEEEE
T ss_pred -EEeCCCCcceEEE-------CCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCC------CcceEEECCCCCEEEEEe
Confidence 1223345666766 7788877 788889999999999999888887654 568999999998885 55
Q ss_pred -cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEe---CCCcEEEEecCCCeEEEEEeecCCC
Q 023672 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS---YSQTSAIYREDNMELLYVLHGQEGG 267 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~---~dg~i~~wd~~~~~~~~~~~~~~~~ 267 (279)
.++.|++||++++ +....+ .+...+.+++|+| ++.+|++++ .++.|++||+.+++++..+..|. .
T Consensus 177 ~~~~~v~~~d~~~~----~~~~~~-----~~~~~~~~~~~~~-~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~-~ 245 (391)
T 1l0q_A 177 FDSMSISVIDTVTN----SVIDTV-----KVEAAPSGIAVNP-EGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGP-D 245 (391)
T ss_dssp TTTTEEEEEETTTT----EEEEEE-----ECSSEEEEEEECT-TSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCS-S
T ss_pred CCCCEEEEEECCCC----eEEEEE-----ecCCCccceEECC-CCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCC-C
Confidence 8899999999874 222222 2345789999999 788888777 68999999999999998888765 5
Q ss_pred EEEEEEccCCCC
Q 023672 268 VTHVSKLSSAYT 279 (279)
Q Consensus 268 v~~~~~spdg~~ 279 (279)
+.+++|+|||++
T Consensus 246 ~~~~~~s~dg~~ 257 (391)
T 1l0q_A 246 PAGIAVTPDGKK 257 (391)
T ss_dssp EEEEEECTTSSE
T ss_pred ccEEEEccCCCE
Confidence 799999999963
No 122
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=4.7e-24 Score=173.56 Aligned_cols=202 Identities=10% Similarity=0.128 Sum_probs=156.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+||+.+++...... .....+|.+.|.+++|+|+++++++++.|+.|++||+.++.... .
T Consensus 145 ~i~~~d~~~g~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~-----------------~ 206 (433)
T 3bws_A 145 GMDVLDINSGQTVRLSP-PEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKA-----------------T 206 (433)
T ss_dssp SEEEEETTTCCEEEECC-CHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEE-----------------E
T ss_pred eEEEEECCCCeEeeecC-cccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEE-----------------E
Confidence 37788888777653211 11456899999999999999999999999999999998654321 1
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEE-EEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-c
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVF-ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l-~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 192 (279)
...+...+..++| +|++..+ ++++.|+.|++||+++++.+..+..+. .+.+++|+|+++.++++ .
T Consensus 207 ~~~~~~~~~~~~~-------~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 207 VDLTGKWSKILLY-------DPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG------LPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp EECSSSSEEEEEE-------ETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCS------EEEEEEECTTSSEEEEEEE
T ss_pred EcCCCCCeeEEEE-------cCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCC------CceEEEEcCCCCEEEEEEC
Confidence 2245567777877 6677777 555689999999999998877776543 68899999999888854 2
Q ss_pred --------CCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCC-cEEEEEeCCCcEEEEecCCCeEEEEEee
Q 023672 193 --------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT-GMLAIGSYSQTSAIYREDNMELLYVLHG 263 (279)
Q Consensus 193 --------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~-~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 263 (279)
|+.|++||++++ +....+ .|...+.+++|+| ++ .++++++.|+.|++||+.+++.+..+.
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~----~~~~~~-----~~~~~~~~~~~~~-~g~~l~~~~~~~~~v~v~d~~~~~~~~~~~- 342 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKE----KLIDTI-----GPPGNKRHIVSGN-TENKIYVSDMCCSKIEVYDLKEKKVQKSIP- 342 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTT----EEEEEE-----EEEECEEEEEECS-STTEEEEEETTTTEEEEEETTTTEEEEEEE-
T ss_pred CCCccccCCCeEEEEECCCC----cEEeec-----cCCCCcceEEECC-CCCEEEEEecCCCEEEEEECCCCcEEEEec-
Confidence 789999999873 222222 3345788999999 66 566778999999999999999888877
Q ss_pred cCCCEEEEEEccCCC
Q 023672 264 QEGGVTHVSKLSSAY 278 (279)
Q Consensus 264 ~~~~v~~~~~spdg~ 278 (279)
+...+.+++|+|||+
T Consensus 343 ~~~~~~~~~~s~dg~ 357 (433)
T 3bws_A 343 VFDKPNTIALSPDGK 357 (433)
T ss_dssp CSSSEEEEEECTTSS
T ss_pred CCCCCCeEEEcCCCC
Confidence 677899999999996
No 123
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=3.8e-24 Score=169.71 Aligned_cols=179 Identities=12% Similarity=0.078 Sum_probs=125.1
Q ss_pred eeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeE-EEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 36 ~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
+.+|+..+...... .+...+..+++.++++.+ ++++.|++|+|||+.++.......
T Consensus 42 ~~iw~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~--------------- 98 (355)
T 3vu4_A 42 FEIYNVHPVAHIMS--------QEMRHLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIK--------------- 98 (355)
T ss_dssp EEEEEETTEEEEEE--------EECSCCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEE---------------
T ss_pred EEEEecCCcceeee--------eecCCeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEE---------------
Confidence 45777665544321 111247888999988877 568888999999998875432211
Q ss_pred eecCCCceEEEEeeCc------------------------------ccccCCCCcEEEE--ecCCCcEEEEECCCCe---
Q 023672 115 VVTEGESVYDFCWFPH------------------------------MSASDPTSCVFAS--TTRDHPIHLWDATTGL--- 159 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~------------------------------~~~~~~~~~~l~s--~~~d~~i~i~d~~~~~--- 159 (279)
+...|.++.+++. ..++++ .++++ |+.||.|++||+.+++
T Consensus 99 ---~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~ 173 (355)
T 3vu4_A 99 ---VDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNLGQIHITKLQSSGSAT 173 (355)
T ss_dssp ---CSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCTTCEEEEECCC-----
T ss_pred ---CCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcCcEEEEEECCCCCccc
Confidence 1112222222221 112233 34554 6889999999999865
Q ss_pred -------------eeEEEeccCccccccceeeEEECCCCCEEEEe-cCCe-EEEEEccCCCCceeeeeecccccCC-CCC
Q 023672 160 -------------LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKS-VRVFDVHRPGRDFEKYSTLKGNKEG-QAG 223 (279)
Q Consensus 160 -------------~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~-i~~~d~~~~~~~~~~~~~~~~~~~~-~~~ 223 (279)
.+..+..|.. .|.+++|+|++++|+++ .|++ |++||++++ +....+. .+ |..
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~h~~-----~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~----~~~~~~~---~g~h~~ 241 (355)
T 3vu4_A 174 TQDQGVQQKAILGKGVLIKAHTN-----PIKMVRLNRKSDMVATCSQDGTIIRVFKTEDG----VLVREFR---RGLDRA 241 (355)
T ss_dssp -------------CCEEECCCSS-----CEEEEEECTTSSEEEEEETTCSEEEEEETTTC----CEEEEEE---CTTCCS
T ss_pred cccccccccccCcccEEEEccCC-----ceEEEEECCCCCEEEEEeCCCCEEEEEECCCC----cEEEEEE---cCCCCC
Confidence 1566666665 89999999999999966 9998 999999984 2333331 14 889
Q ss_pred ceEEEEEccCCCcEEEEEeCCCcEEEEecCCC
Q 023672 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (279)
Q Consensus 224 ~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~ 255 (279)
.|.+++|+| ++.+|++++.|++|++||++.+
T Consensus 242 ~v~~~~~s~-~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 242 DVVDMKWST-DGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp CEEEEEECT-TSCEEEEEETTCEEEEEESSCC
T ss_pred cEEEEEECC-CCCEEEEEECCCEEEEEEccCC
Confidence 999999999 9999999999999999999765
No 124
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=1.1e-23 Score=164.18 Aligned_cols=170 Identities=16% Similarity=0.327 Sum_probs=133.4
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+.+|...+.++.|++++++|++++.||+|++||+.+++..... ......+...|..+.+.|.
T Consensus 145 ~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~-------------~~~~~~~~~~v~~~~~~~~---- 207 (318)
T 4ggc_A 145 TLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVP-------------LQTFTQHQGAVKAVAWCPW---- 207 (318)
T ss_dssp EEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCC-------------SEEECCCCSCEEEEEECTT----
T ss_pred EEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccc-------------eeeecccCCceEEEEecCC----
Confidence 56789999999999999999999999999999999876432111 1123345567888887553
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE--Ee-cCCeEEEEEccCCCCceeee
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF--AG-YNKSVRVFDVHRPGRDFEKY 211 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~--~~-~d~~i~~~d~~~~~~~~~~~ 211 (279)
+++...+++++.++.|++||.............. .+..+.|+|++..++ +| .|+.|++||++++ +.+
T Consensus 208 ~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~~~~~------~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~----~~~ 277 (318)
T 4ggc_A 208 QSNVLATGGGTSDRHIRIWNVCSGACLSAVDAHS------QVCSILWSPHYKELISGHGFAQNQLVIWKYPTM----AKV 277 (318)
T ss_dssp STTEEEEEECTTTCEEEEEETTTCCEEEEEECSS------CEEEEEEETTTTEEEEEECTTTCCEEEEETTTC----CEE
T ss_pred CCcEEEEEecCCCCEEEEEeccccccccccccee------eeeeeeecccccceEEEEEcCCCEEEEEECCCC----cEE
Confidence 2222244677889999999999888766655444 788999999998776 34 7899999999984 333
Q ss_pred eecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCe
Q 023672 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (279)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~ 256 (279)
..+ .+|.+.|++++|+| ++.+|++|+.||+|+|||+.+..
T Consensus 278 ~~l----~gH~~~V~~l~~sp-dg~~l~S~s~D~~v~iWd~~~~d 317 (318)
T 4ggc_A 278 AEL----KGHTSRVLSLTMSP-DGATVASAAADETLRLWRCFELD 317 (318)
T ss_dssp EEE----CCCSSCEEEEEECT-TSSCEEEEETTTEEEEECCSCCC
T ss_pred EEE----cCCCCCEEEEEEcC-CCCEEEEEecCCeEEEEECCCCC
Confidence 444 68999999999999 89999999999999999997654
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=5.9e-23 Score=167.03 Aligned_cols=197 Identities=9% Similarity=0.029 Sum_probs=151.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||+.+++... .+..|...+.+++|+|++++++ +++.|+.|++||+.++....
T Consensus 192 ~v~~~d~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~----------------- 248 (433)
T 3bws_A 192 AVHVFDLKTLAYKA------TVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIR----------------- 248 (433)
T ss_dssp EEEEEETTTCCEEE------EEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEE-----------------
T ss_pred EEEEEECCCceEEE------EEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEE-----------------
Confidence 57788988776654 4557888999999999999885 55579999999998654321
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEec--------CCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCC
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTT--------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTG 185 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~--------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 185 (279)
.......+..++| +|+++.+++++ .|+.|++||+.+++....+.... .+.+++|+|++
T Consensus 249 -~~~~~~~~~~~~~-------~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~------~~~~~~~~~~g 314 (433)
T 3bws_A 249 -KTDKIGLPRGLLL-------SKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG------NKRHIVSGNTE 314 (433)
T ss_dssp -ECCCCSEEEEEEE-------CTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE------CEEEEEECSST
T ss_pred -EecCCCCceEEEE-------cCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC------CcceEEECCCC
Confidence 1122234666655 78898888887 58899999999998776664322 67899999999
Q ss_pred CEEE-Ee-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC---------------CCcEE
Q 023672 186 TKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY---------------SQTSA 248 (279)
Q Consensus 186 ~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~---------------dg~i~ 248 (279)
+.++ ++ .++.|++||+.++ +....+ .+...+.+++|+| ++.+|++++. ||.|+
T Consensus 315 ~~l~~~~~~~~~v~v~d~~~~----~~~~~~-----~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~ 384 (433)
T 3bws_A 315 NKIYVSDMCCSKIEVYDLKEK----KVQKSI-----PVFDKPNTIALSP-DGKYLYVSCRGPNHPTEGYLKKGLVLGKVY 384 (433)
T ss_dssp TEEEEEETTTTEEEEEETTTT----EEEEEE-----ECSSSEEEEEECT-TSSEEEEEECCCCCTTTCTTSCCSSCCEEE
T ss_pred CEEEEEecCCCEEEEEECCCC----cEEEEe-----cCCCCCCeEEEcC-CCCEEEEEecCCCccccccccccccceEEE
Confidence 7665 54 8999999999873 222222 2456789999999 8887777765 57999
Q ss_pred EEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 249 IYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 249 ~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+||+.+++.+..+.. ...+.+++|+|||++
T Consensus 385 ~~d~~~~~~~~~~~~-~~~~~~~~~s~dg~~ 414 (433)
T 3bws_A 385 VIDTTTDTVKEFWEA-GNQPTGLDVSPDNRY 414 (433)
T ss_dssp EEETTTTEEEEEEEC-SSSEEEEEECTTSCE
T ss_pred EEECCCCcEEEEecC-CCCCceEEEcCCCCE
Confidence 999999999988886 457999999999974
No 126
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.93 E-value=3.8e-24 Score=170.05 Aligned_cols=181 Identities=19% Similarity=0.250 Sum_probs=136.3
Q ss_pred eeeEecCCC-CcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPP-HRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+++||+.+ +... ...+.+|.+.|++++|+|++++|++++.||.|++||+.++...
T Consensus 65 ~i~iw~~~~~~~~~-----~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~------------------ 121 (368)
T 3mmy_A 65 DVRCWEVQDSGQTI-----PKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAI------------------ 121 (368)
T ss_dssp EEEEEEECTTSCEE-----EEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE------------------
T ss_pred cEEEEEcCCCCcee-----EEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCce------------------
Confidence 577888876 3332 1256789999999999999999999999999999999876432
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCc------------------------
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDA------------------------ 169 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~------------------------ 169 (279)
....+...|.++.|.| ++++.+|++++.|+.|++||+++++.+..+..+..
T Consensus 122 ~~~~~~~~v~~~~~~~-----~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 196 (368)
T 3mmy_A 122 QIAQHDAPVKTIHWIK-----APNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQ 196 (368)
T ss_dssp EEEECSSCEEEEEEEE-----CSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEE
T ss_pred eeccccCceEEEEEEe-----CCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEE
Confidence 2344667888888743 56778888888888888888877654433321110
Q ss_pred -------------------------------------------------------------ccccc------------ce
Q 023672 170 -------------------------------------------------------------VDEIT------------AA 176 (279)
Q Consensus 170 -------------------------------------------------------------~~~~~------------~v 176 (279)
..+.. .|
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 276 (368)
T 3mmy_A 197 LENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAV 276 (368)
T ss_dssp CSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCE
T ss_pred eccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccce
Confidence 00111 48
Q ss_pred eeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 177 FSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 177 ~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
.+++|+|++++|+++ .|+.|++||++++ +....+ .+|...|.+++|+| ++.+|++++.|+..+.|++
T Consensus 277 ~~~~~sp~~~~l~s~~~dg~i~iwd~~~~----~~~~~~----~~~~~~v~~~~~s~-~g~~l~~~s~d~~~~~~~~ 344 (368)
T 3mmy_A 277 NGIAFHPVHGTLATVGSDGRFSFWDKDAR----TKLKTS----EQLDQPISACCFNH-NGNIFAYASSYDWSKGHEF 344 (368)
T ss_dssp EEEEECTTTCCEEEEETTSCEEEEETTTT----EEEEEC----CCCSSCEEEEEECT-TSSCEEEEECCCSTTCGGG
T ss_pred EEEEEecCCCEEEEEccCCeEEEEECCCC----cEEEEe----cCCCCCceEEEECC-CCCeEEEEecccccccccc
Confidence 999999999999966 9999999999974 333344 68889999999999 9999999999886555554
No 127
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.92 E-value=5.7e-23 Score=166.16 Aligned_cols=196 Identities=13% Similarity=0.075 Sum_probs=144.9
Q ss_pred eeeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCC---eEEEEeCCCCccccccccccccCCCCcc
Q 023672 34 WPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDK---TLRIFSLPENGISYDVNACSLAKDQDSY 110 (279)
Q Consensus 34 ~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 110 (279)
..+++||+..... . .+.+|.+.|.+++|+|||++|++++.|+ .|++||+.+++..
T Consensus 159 ~~i~i~d~~g~~~-~------~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~--------------- 216 (415)
T 2hqs_A 159 YELRVSDYDGYNQ-F------VVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVR--------------- 216 (415)
T ss_dssp EEEEEEETTSCSC-E------EEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE---------------
T ss_pred ceEEEEcCCCCCC-E------EEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEE---------------
Confidence 5678888875433 2 4567889999999999999999999875 9999999876431
Q ss_pred cceeeecCCCceEEEEeeCcccccCCCCcEEE-EecCCCc--EEEEECCCCeeeEEEeccCccccccceeeEEECCCCCE
Q 023672 111 EASLVVTEGESVYDFCWFPHMSASDPTSCVFA-STTRDHP--IHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTK 187 (279)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~-s~~~d~~--i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 187 (279)
....+...+..++| +|+|+.|+ +++.++. |++||+.+++. ..+..+.. .+.+++|+|+|+.
T Consensus 217 ---~l~~~~~~~~~~~~-------spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~~-----~~~~~~~spdg~~ 280 (415)
T 2hqs_A 217 ---QVASFPRHNGAPAF-------SPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDGRS-----NNTEPTWFPDSQN 280 (415)
T ss_dssp ---EEECCSSCEEEEEE-------CTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCCSS-----CEEEEEECTTSSE
T ss_pred ---EeecCCCcccCEEE-------cCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCCCC-----cccceEECCCCCE
Confidence 12233456777776 78898777 6666654 99999998875 34444443 7889999999998
Q ss_pred EEE-ec-CC--eEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC---CcEEEEecCCCeEEEE
Q 023672 188 IFA-GY-NK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS---QTSAIYREDNMELLYV 260 (279)
Q Consensus 188 l~~-~~-d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d---g~i~~wd~~~~~~~~~ 260 (279)
|+. +. ++ .|++||+.++ . . ..+ ..+...+.+++|+| ++.+|++++.+ ..|++||+.+++.. .
T Consensus 281 l~~~s~~~g~~~i~~~d~~~~-~-~---~~l----~~~~~~~~~~~~sp-dG~~l~~~~~~~g~~~i~~~d~~~~~~~-~ 349 (415)
T 2hqs_A 281 LAFTSDQAGRPQVYKVNINGG-A-P---QRI----TWEGSQNQDADVSS-DGKFMVMVSSNGGQQHIAKQDLATGGVQ-V 349 (415)
T ss_dssp EEEEECTTSSCEEEEEETTSS-C-C---EEC----CCSSSEEEEEEECT-TSSEEEEEEECSSCEEEEEEETTTCCEE-E
T ss_pred EEEEECCCCCcEEEEEECCCC-C-E---EEE----ecCCCcccCeEECC-CCCEEEEEECcCCceEEEEEECCCCCEE-E
Confidence 884 43 45 6777788763 1 1 122 34556788999999 88888887764 57999999988864 4
Q ss_pred EeecCCCEEEEEEccCCCC
Q 023672 261 LHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 261 ~~~~~~~v~~~~~spdg~~ 279 (279)
+..+. .+.+++|+|||++
T Consensus 350 l~~~~-~~~~~~~spdg~~ 367 (415)
T 2hqs_A 350 LSSTF-LDETPSLAPNGTM 367 (415)
T ss_dssp CCCSS-SCEEEEECTTSSE
T ss_pred ecCCC-CcCCeEEcCCCCE
Confidence 55554 8999999999973
No 128
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.91 E-value=2.8e-23 Score=168.64 Aligned_cols=194 Identities=14% Similarity=0.094 Sum_probs=136.8
Q ss_pred CCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
...++.+++++++.++++++.|+ ++||+.............. .............+...|.+++| +|+++
T Consensus 36 ~~~~n~lavs~~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~v~~l~~-------spdg~ 105 (434)
T 2oit_A 36 KERSSLLAVSNKYGLVFAGGASG-LQIFPTKNLLIQNKPGDDP--NKIVDKVQGLLVPMKFPIHHLAL-------SCDNL 105 (434)
T ss_dssp CSCCBCEEEETTTTEEEEEETTE-EEEEEHHHHCCCCCTTCCT--TCEEECCCCEEECCSSCEEEEEE-------CTTSC
T ss_pred CCCccEEEEecCCCEEEEECCCE-EEEEEchHhhhhcccccCc--ccccccCccccccCCCcccEEEE-------cCCCC
Confidence 44689999999999999999888 8998764211100000000 00000011122344567888877 77899
Q ss_pred EEE----EecCCCcEEEEECCCC--------eee---EEEeccCccccccceeeEEECCC-CCEEEEe-cCCeEEEEEcc
Q 023672 140 VFA----STTRDHPIHLWDATTG--------LLR---CTYRAYDAVDEITAAFSVAFNPT-GTKIFAG-YNKSVRVFDVH 202 (279)
Q Consensus 140 ~l~----s~~~d~~i~i~d~~~~--------~~~---~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~-~d~~i~~~d~~ 202 (279)
+|+ +++.|+.|++||++++ +.+ ..+..|.. .|.+++|+|+ +.+++++ .|+.|++||++
T Consensus 106 ~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~-----~V~~v~~~p~~~~~las~s~Dg~v~iwD~~ 180 (434)
T 2oit_A 106 TLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGG-----MVIDMKWNPTVPSMVAVCLADGSIAVLQVT 180 (434)
T ss_dssp EEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGG-----SEEEEEECSSCTTEEEEEETTSCEEEEEES
T ss_pred EEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCC-----ceEEEEECCCCCCEEEEEECCCeEEEEEcC
Confidence 999 8899999999999765 222 22222333 8999999998 7888865 99999999999
Q ss_pred CCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC-------CCEEEEEEcc
Q 023672 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-------GGVTHVSKLS 275 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------~~v~~~~~sp 275 (279)
++ ...... .+|...|.+++|+| ++.+|++|+.||.|++||++ ++....+..|. ..|.+++|++
T Consensus 181 ~~----~~~~~~----~~~~~~v~~v~wsp-dg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v~w~~ 250 (434)
T 2oit_A 181 ET----VKVCAT----LPSTVAVTSVCWSP-KGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDVLWIG 250 (434)
T ss_dssp SS----EEEEEE----ECGGGCEEEEEECT-TSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEEEEEE
T ss_pred CC----cceeec----cCCCCceeEEEEcC-CCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEEEEec
Confidence 74 222122 36778999999999 89999999999999999998 66666665443 2789999998
Q ss_pred CCC
Q 023672 276 SAY 278 (279)
Q Consensus 276 dg~ 278 (279)
++.
T Consensus 251 ~~~ 253 (434)
T 2oit_A 251 TYV 253 (434)
T ss_dssp TTE
T ss_pred Cce
Confidence 865
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.90 E-value=2.7e-21 Score=156.35 Aligned_cols=194 Identities=14% Similarity=0.104 Sum_probs=142.6
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEE-EeeCCCe--EEEEeCCCCccccccccccccCCCCccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFL-TSSEDKT--LRIFSLPENGISYDVNACSLAKDQDSYE 111 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~~~dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 111 (279)
.+++||+.+++.. .+..|.+.+.+++|+|||++|+ +++.|+. |.+||+.++...
T Consensus 204 ~i~~~d~~tg~~~-------~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~---------------- 260 (415)
T 2hqs_A 204 ALVIQTLANGAVR-------QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIR---------------- 260 (415)
T ss_dssp EEEEEETTTCCEE-------EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEE----------------
T ss_pred EEEEEECCCCcEE-------EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEE----------------
Confidence 5677888776653 3456778899999999999888 6666655 999999865431
Q ss_pred ceeeecCCCceEEEEeeCcccccCCCCcEEEEecC-CC--cEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEE
Q 023672 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR-DH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKI 188 (279)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~-d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 188 (279)
....+...+..+.| +|+|+.|++++. ++ .|.+||+.+++.. .+..+.. .+.+++|+|+|++|
T Consensus 261 --~l~~~~~~~~~~~~-------spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~~-----~~~~~~~spdG~~l 325 (415)
T 2hqs_A 261 --QVTDGRSNNTEPTW-------FPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEGS-----QNQDADVSSDGKFM 325 (415)
T ss_dssp --ECCCCSSCEEEEEE-------CTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSSS-----EEEEEEECTTSSEE
T ss_pred --eCcCCCCcccceEE-------CCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCCC-----cccCeEECCCCCEE
Confidence 11233456777766 789998888776 44 6778899887643 3333333 67899999999999
Q ss_pred EEe-cC---CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC---cEEEEecCCCeEEEEE
Q 023672 189 FAG-YN---KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ---TSAIYREDNMELLYVL 261 (279)
Q Consensus 189 ~~~-~d---~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg---~i~~wd~~~~~~~~~~ 261 (279)
+.+ .+ ..|++||+.++ .. ..+ ..+. .+.+++|+| ++.+|++++.++ .|++||+. +..+..+
T Consensus 326 ~~~~~~~g~~~i~~~d~~~~-~~----~~l----~~~~-~~~~~~~sp-dg~~l~~~s~~~~~~~l~~~d~~-g~~~~~l 393 (415)
T 2hqs_A 326 VMVSSNGGQQHIAKQDLATG-GV----QVL----SSTF-LDETPSLAP-NGTMVIYSSSQGMGSVLNLVSTD-GRFKARL 393 (415)
T ss_dssp EEEEECSSCEEEEEEETTTC-CE----EEC----CCSS-SCEEEEECT-TSSEEEEEEEETTEEEEEEEETT-SCCEEEC
T ss_pred EEEECcCCceEEEEEECCCC-CE----EEe----cCCC-CcCCeEEcC-CCCEEEEEEcCCCccEEEEEECC-CCcEEEe
Confidence 844 43 58999999873 21 122 2333 789999999 888888887776 79999986 5567788
Q ss_pred eecCCCEEEEEEccCCC
Q 023672 262 HGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 262 ~~~~~~v~~~~~spdg~ 278 (279)
..|.+.|.+++|+|.-.
T Consensus 394 ~~~~~~v~~~~~~~~~~ 410 (415)
T 2hqs_A 394 PATDGQVKFPAWSPYLH 410 (415)
T ss_dssp CCSSSEEEEEEECCCCC
T ss_pred eCCCCCCcCCccccccc
Confidence 88999999999999643
No 130
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.90 E-value=1.1e-21 Score=151.13 Aligned_cols=202 Identities=14% Similarity=0.140 Sum_probs=143.4
Q ss_pred eeeeeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCC-CccccccccccccCCCCcc
Q 023672 32 YTWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPE-NGISYDVNACSLAKDQDSY 110 (279)
Q Consensus 32 ~~~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~ 110 (279)
..-.+++||+.+++.. .+..|.+.|.+++|+|++++|++++ ++.|.+||+.+ +.....
T Consensus 20 ~~~~i~~~d~~~~~~~-------~~~~~~~~v~~~~~spdg~~l~~~~-~~~i~~~d~~~~~~~~~~------------- 78 (297)
T 2ojh_A 20 MRSSIEIFNIRTRKMR-------VVWQTPELFEAPNWSPDGKYLLLNS-EGLLYRLSLAGDPSPEKV------------- 78 (297)
T ss_dssp CCEEEEEEETTTTEEE-------EEEEESSCCEEEEECTTSSEEEEEE-TTEEEEEESSSCCSCEEC-------------
T ss_pred cceeEEEEeCCCCcee-------eeccCCcceEeeEECCCCCEEEEEc-CCeEEEEeCCCCCCceEe-------------
Confidence 3456888999887754 2445788999999999999999887 78999999987 533110
Q ss_pred cceeeecCCCceEEEEeeCcccccCCCCcEEEEec--CCCcEEEE--ECCCCeeeEEEeccCccccccceeeEEECCCCC
Q 023672 111 EASLVVTEGESVYDFCWFPHMSASDPTSCVFASTT--RDHPIHLW--DATTGLLRCTYRAYDAVDEITAAFSVAFNPTGT 186 (279)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~--~d~~i~i~--d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 186 (279)
....+...+.++.| +|++++|++++ .++...|| ++.+++ ...+.... .+..++|+|+++
T Consensus 79 ---~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~------~~~~~~~spdg~ 141 (297)
T 2ojh_A 79 ---DTGFATICNNDHGI-------SPDGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL------PSYWHGWSPDGK 141 (297)
T ss_dssp ---CCTTCCCBCSCCEE-------CTTSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS------SEEEEEECTTSS
T ss_pred ---ccccccccccceEE-------CCCCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC------CccceEECCCCC
Confidence 11112234555555 88999999988 33455555 545544 33333322 577899999999
Q ss_pred EEE-Ee-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEe-CCCcEEEEecC-CCeEEEEEe
Q 023672 187 KIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYRED-NMELLYVLH 262 (279)
Q Consensus 187 ~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~~wd~~-~~~~~~~~~ 262 (279)
.++ ++ .++.+++|+++....... .+ ..+...+.+++|+| ++..|+.++ .++.+++|++. .+..+..+.
T Consensus 142 ~l~~~~~~~~~~~l~~~~~~~~~~~---~~----~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~i~~~~~~~~~~~~~~ 213 (297)
T 2ojh_A 142 SFTYCGIRDQVFDIYSMDIDSGVET---RL----THGEGRNDGPDYSP-DGRWIYFNSSRTGQMQIWRVRVDGSSVERIT 213 (297)
T ss_dssp EEEEEEEETTEEEEEEEETTTCCEE---EC----CCSSSCEEEEEECT-TSSEEEEEECTTSSCEEEEEETTSSCEEECC
T ss_pred EEEEEECCCCceEEEEEECCCCcce---Ec----ccCCCccccceECC-CCCEEEEEecCCCCccEEEECCCCCCcEEEe
Confidence 887 55 889999999764322221 22 45667899999999 777666555 58999999987 566677777
Q ss_pred ecCCCEEEEEEccCCCC
Q 023672 263 GQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 263 ~~~~~v~~~~~spdg~~ 279 (279)
.|...+.+++|+|||++
T Consensus 214 ~~~~~~~~~~~s~dg~~ 230 (297)
T 2ojh_A 214 DSAYGDWFPHPSPSGDK 230 (297)
T ss_dssp CCSEEEEEEEECTTSSE
T ss_pred cCCcccCCeEECCCCCE
Confidence 78888999999999974
No 131
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=5.3e-21 Score=159.34 Aligned_cols=207 Identities=12% Similarity=0.091 Sum_probs=138.6
Q ss_pred eeeEecCCCCcccceeeeeeccC-CCCCceEEEEEccCCCeEEEeeCCCeEEEEeC--CCCccccccccccccCCCCccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSS-IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSL--PENGISYDVNACSLAKDQDSYE 111 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~--~~~~~~~~~~~~~~~~~~~~~~ 111 (279)
.+.+||..+++++. ++. +|. +.+++|+|||++|++++.|++|.+||+ .+++....
T Consensus 160 ~V~v~D~~t~~~~~------~i~~g~~--~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~-------------- 217 (543)
T 1nir_A 160 QIALVDGDSKKIVK------VIDTGYA--VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAE-------------- 217 (543)
T ss_dssp EEEEEETTTCCEEE------EEECSTT--EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEE--------------
T ss_pred eEEEEECCCceEEE------EEecCcc--cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEE--------------
Confidence 57788888887765 333 343 889999999999999999999999999 55432111
Q ss_pred ceeeecCCCceEEEEeeCcccccCC----CCcEEEEecC-CCcEEEEECCCCeeeEEEeccC----------c-------
Q 023672 112 ASLVVTEGESVYDFCWFPHMSASDP----TSCVFASTTR-DHPIHLWDATTGLLRCTYRAYD----------A------- 169 (279)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~----~~~~l~s~~~-d~~i~i~d~~~~~~~~~~~~~~----------~------- 169 (279)
...+.....+ +|+| +++++++++. +++|.+||..+++++..+.... .
T Consensus 218 ----i~~g~~p~~v-------a~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~ 286 (543)
T 1nir_A 218 ----IKIGIEARSV-------ESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAII 286 (543)
T ss_dssp ----EECCSEEEEE-------EECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEE
T ss_pred ----EecCCCcceE-------EeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEE
Confidence 1122223333 3355 6666666553 5666666666655544443210 0
Q ss_pred ---------------------------------cccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeec
Q 023672 170 ---------------------------------VDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 170 ---------------------------------~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
......+.++.|+|++++++ ++ .++.|.+||..++ +....+
T Consensus 287 ~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg----~l~~~i 362 (543)
T 1nir_A 287 ASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDR----RLSALV 362 (543)
T ss_dssp ECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTT----EEEEEE
T ss_pred ECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECCCC----eEEEee
Confidence 00011455689999999776 45 6889999999984 333333
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEe-CCCcEEEEecCC-------CeEEEEEeecCCCEEEEEEccCCCC
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDN-------MELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
......|.+....+ ++|+++.+++++. .|++|.+||+.+ ++++.++..|.+.+..++|||||++
T Consensus 363 ~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~ 434 (543)
T 1nir_A 363 DVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSH 434 (543)
T ss_dssp ECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCE
T ss_pred ccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCc
Confidence 22222355444443 5784577788876 689999999998 8999999999888899999999974
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.89 E-value=2e-20 Score=146.75 Aligned_cols=203 Identities=14% Similarity=0.138 Sum_probs=142.7
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeC-CCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||..+++... ....+...+ +++|+|++++|++++. ++.|.+||+.++... ..
T Consensus 21 ~v~~~d~~~~~~~~------~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~----------------~~ 77 (331)
T 3u4y_A 21 RISFFSTDTLEILN------QITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPK----------------VV 77 (331)
T ss_dssp EEEEEETTTCCEEE------EEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCE----------------EE
T ss_pred eEEEEeCcccceee------eEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCcee----------------EE
Confidence 57889998887754 223345556 9999999997776655 899999999865430 00
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecCCC---cEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDH---PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF- 189 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~---~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~- 189 (279)
....+..+...+ +++|++++++++..++ .|.+||+.+++.+..+.... .+.+++|+|+|++++
T Consensus 78 ~~~~~~~~~~~~-------~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~------~~~~~~~spdg~~l~~ 144 (331)
T 3u4y_A 78 AIQEGQSSMADV-------DITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY------DAVGIAISPNGNGLIL 144 (331)
T ss_dssp EEEECSSCCCCE-------EECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCT------TEEEEEECTTSSCEEE
T ss_pred ecccCCCCccce-------EECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCC------CccceEECCCCCEEEE
Confidence 111122222224 4588999998665553 89999999999888776544 567999999998666
Q ss_pred Ee-cCCe-EEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEecCCCeE---EEEEee
Q 023672 190 AG-YNKS-VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDNMEL---LYVLHG 263 (279)
Q Consensus 190 ~~-~d~~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~~~~~~---~~~~~~ 263 (279)
++ .++. |.+|++...+......... ......+..++|+| ++. +++++..++.|++||+.+++. +..+..
T Consensus 145 ~~~~~~~~i~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~sp-dg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~ 219 (331)
T 3u4y_A 145 IDRSSANTVRRFKIDADGVLFDTGQEF----ISGGTRPFNITFTP-DGNFAFVANLIGNSIGILETQNPENITLLNAVGT 219 (331)
T ss_dssp EEETTTTEEEEEEECTTCCEEEEEEEE----ECSSSSEEEEEECT-TSSEEEEEETTTTEEEEEECSSTTSCEEEEEEEC
T ss_pred EecCCCceEEEEEECCCCcEeecCCcc----ccCCCCccceEECC-CCCEEEEEeCCCCeEEEEECCCCcccceeeeccC
Confidence 44 5577 9999998643322221111 12234578999999 776 555666789999999999988 777774
Q ss_pred cCCCEEEEEEccCCCC
Q 023672 264 QEGGVTHVSKLSSAYT 279 (279)
Q Consensus 264 ~~~~v~~~~~spdg~~ 279 (279)
+ ..+.+++|+|||++
T Consensus 220 ~-~~~~~~~~spdg~~ 234 (331)
T 3u4y_A 220 N-NLPGTIVVSRDGST 234 (331)
T ss_dssp S-SCCCCEEECTTSSE
T ss_pred C-CCCceEEECCCCCE
Confidence 4 56789999999973
No 133
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.88 E-value=2.1e-21 Score=157.65 Aligned_cols=176 Identities=14% Similarity=0.107 Sum_probs=122.4
Q ss_pred CCCCceEEEEEccCCCeEE----EeeCCCeEEEEeCCCCccccccccccccCCCCccc--ceeeecCCCceEEEEeeCcc
Q 023672 58 IPNNFLKGIKWSPDGSSFL----TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYE--ASLVVTEGESVYDFCWFPHM 131 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~----t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~v~~~~~~~~~ 131 (279)
.|.+.|.+++|+|++++|+ +|+.|++|+|||+.++...... ..... ......|...|.+++|+|.
T Consensus 90 ~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~--------~~~~~~~~~~~~~h~~~V~~v~~~p~- 160 (434)
T 2oit_A 90 PMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQ--------QKRPFAYHKLLKDAGGMVIDMKWNPT- 160 (434)
T ss_dssp CCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCS--------SCCCSEEEECCCSGGGSEEEEEECSS-
T ss_pred cCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcC--------CcceeeeeeccCCCCCceEEEEECCC-
Confidence 3567899999999999999 7899999999998753100000 00000 1122346778999998443
Q ss_pred cccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceee
Q 023672 132 SASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEK 210 (279)
Q Consensus 132 ~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~ 210 (279)
++.+|++++.|++|++||++++........+.. .|.+++|+|+|++|++| .|+.|++||++. .....
T Consensus 161 -----~~~~las~s~Dg~v~iwD~~~~~~~~~~~~~~~-----~v~~v~wspdg~~lasgs~dg~v~iwd~~~--~~~~~ 228 (434)
T 2oit_A 161 -----VPSMVAVCLADGSIAVLQVTETVKVCATLPSTV-----AVTSVCWSPKGKQLAVGKQNGTVVQYLPTL--QEKKV 228 (434)
T ss_dssp -----CTTEEEEEETTSCEEEEEESSSEEEEEEECGGG-----CEEEEEECTTSSCEEEEETTSCEEEECTTC--CEEEE
T ss_pred -----CCCEEEEEECCCeEEEEEcCCCcceeeccCCCC-----ceeEEEEcCCCCEEEEEcCCCcEEEEccCC--ccccc
Confidence 278999999999999999999866555554444 89999999999999976 999999999982 21111
Q ss_pred eeecccccCCCCCceEEEEEccCCCcEEEE-EeCCC------cEEEEecCCC
Q 023672 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAI-GSYSQ------TSAIYREDNM 255 (279)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~-~~~dg------~i~~wd~~~~ 255 (279)
+.........|...|.+++|++ ++.++++ ++.+| .+++|+++..
T Consensus 229 ~~~~~~~~~~~~~~v~~v~w~~-~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 229 IPCPPFYESDHPVRVLDVLWIG-TYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp ECCCTTCCTTSCEEEEEEEEEE-TTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred ccCCcccCCCCceeEEEEEEec-CceEEEEEccCCCccCCCCceEEEEeccC
Confidence 1111000113445899999999 7777654 33443 3889999864
No 134
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.87 E-value=1.8e-20 Score=144.29 Aligned_cols=199 Identities=18% Similarity=0.222 Sum_probs=139.3
Q ss_pred eeeEecCCC-CcccceeeeeeccCCC-CCceEEEEEccCCCeEEEee--CCCeEEEEeCC--CCccccccccccccCCCC
Q 023672 35 PLIRFDVPP-HRTYHFYNQFRTSSIP-NNFLKGIKWSPDGSSFLTSS--EDKTLRIFSLP--ENGISYDVNACSLAKDQD 108 (279)
Q Consensus 35 ~~~~~d~~~-~~~~~~~~~~~~~~~h-~~~v~~~~~~~~~~~l~t~~--~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~ 108 (279)
.+++||+.+ +.... ...+| ...|.+++|+|++++|++++ .++.+.||.++ ++..
T Consensus 63 ~i~~~d~~~~~~~~~------~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-------------- 122 (297)
T 2ojh_A 63 LLYRLSLAGDPSPEK------VDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-------------- 122 (297)
T ss_dssp EEEEEESSSCCSCEE------CCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC--------------
T ss_pred eEEEEeCCCCCCceE------eccccccccccceEECCCCCEEEEEEeCCCCcceEEEEECCCCce--------------
Confidence 567888877 65543 33444 47789999999999999988 34556666553 3211
Q ss_pred cccceeeecCCCceEEEEeeCcccccCCCCcEEE-EecCCCcEEEEECC--CCeeeEEEeccCccccccceeeEEECCCC
Q 023672 109 SYEASLVVTEGESVYDFCWFPHMSASDPTSCVFA-STTRDHPIHLWDAT--TGLLRCTYRAYDAVDEITAAFSVAFNPTG 185 (279)
Q Consensus 109 ~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~-s~~~d~~i~i~d~~--~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 185 (279)
........+..+.| +|+++.|+ +++.++.+++|+++ +++ ...+..+.. .+.+++|+|++
T Consensus 123 -----~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~~-----~~~~~~~s~dg 184 (297)
T 2ojh_A 123 -----RLMTKNLPSYWHGW-------SPDGKSFTYCGIRDQVFDIYSMDIDSGV-ETRLTHGEG-----RNDGPDYSPDG 184 (297)
T ss_dssp -----EECCSSSSEEEEEE-------CTTSSEEEEEEEETTEEEEEEEETTTCC-EEECCCSSS-----CEEEEEECTTS
T ss_pred -----EEeecCCCccceEE-------CCCCCEEEEEECCCCceEEEEEECCCCc-ceEcccCCC-----ccccceECCCC
Confidence 11112224666666 77888777 77789999999863 343 333333333 78899999999
Q ss_pred CEEE-Ee-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC-----------CcEEEEec
Q 023672 186 TKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----------QTSAIYRE 252 (279)
Q Consensus 186 ~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-----------g~i~~wd~ 252 (279)
+.++ ++ .++.+++|++...+.... .+ ..|...+.+++|+| ++.+|++++.+ +.|++||+
T Consensus 185 ~~l~~~~~~~~~~~i~~~~~~~~~~~---~~----~~~~~~~~~~~~s~-dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~ 256 (297)
T 2ojh_A 185 RWIYFNSSRTGQMQIWRVRVDGSSVE---RI----TDSAYGDWFPHPSP-SGDKVVFVSYDADVFDHPRDLDVRVQLMDM 256 (297)
T ss_dssp SEEEEEECTTSSCEEEEEETTSSCEE---EC----CCCSEEEEEEEECT-TSSEEEEEEEETTCCSCCSSEEEEEEEEET
T ss_pred CEEEEEecCCCCccEEEECCCCCCcE---EE----ecCCcccCCeEECC-CCCEEEEEEcCCCCCcccccCceEEEEEec
Confidence 9887 45 689999999874332222 22 45566789999999 88888877765 56999999
Q ss_pred CCCeE--EEEEeecCCCEEEEEEccCCCC
Q 023672 253 DNMEL--LYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 253 ~~~~~--~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.+++. +..+.+|...+.+++|+|||++
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 285 (297)
T 2ojh_A 257 DGGNVETLFDLFGGQGTMNSPNWSPDGDE 285 (297)
T ss_dssp TSCSCEEEEEEEESTTTSCSCCBCTTSSE
T ss_pred CCCCceeeeccCCCCcccccceECCCCCE
Confidence 88865 4455578889999999999973
No 135
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.86 E-value=3.5e-19 Score=140.71 Aligned_cols=224 Identities=10% Similarity=0.111 Sum_probs=139.0
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEee-CCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+|++.++.... ......+...+..++|+|+|++|++++ .++.|.+|++.............. ... ...
T Consensus 64 ~v~~~~~~~g~~~~----~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~-~~~-~p~-- 135 (347)
T 3hfq_A 64 GIAAWQIDGQTAHK----LNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQH-SGH-GPR-- 135 (347)
T ss_dssp EEEEEEEETTEEEE----EEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEEC-CCC-CSS--
T ss_pred eEEEEEecCCcEEE----eeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeec-CCC-CCC--
Confidence 46677775544311 123344667789999999999888887 689999999963221111000000 000 000
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECC-CCeeeEE--EeccCccccccceeeEEECCCCCEEE-
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDAT-TGLLRCT--YRAYDAVDEITAAFSVAFNPTGTKIF- 189 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~-~~~~~~~--~~~~~~~~~~~~v~~~~~~~~~~~l~- 189 (279)
.......+..+.| +|+++++++...++.|.+|++. +++.... +..... ..+..++|+|+|++++
T Consensus 136 -~~~~~~~~~~~~~-------spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g----~~p~~~~~spdg~~l~v 203 (347)
T 3hfq_A 136 -PEQDGSHIHYTDL-------TPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAG----FGPRHLVFSPDGQYAFL 203 (347)
T ss_dssp -TTCSSCCEEEEEE-------CTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTT----CCEEEEEECTTSSEEEE
T ss_pred -ccccCCCceEEEE-------CCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCC----CCCceEEECCCCCEEEE
Confidence 0001123555554 8889977777778899999998 5543322 122111 1567899999999776
Q ss_pred Ee-cCCeEEEEEccCCCCceeeeeecccccC--CCCCceEEEEEccCCCcEE-EEEeCCCcEEEEecCC---CeEEEEEe
Q 023672 190 AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE--GQAGIMSAIAFSPTHTGML-AIGSYSQTSAIYREDN---MELLYVLH 262 (279)
Q Consensus 190 ~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~~l-~~~~~dg~i~~wd~~~---~~~~~~~~ 262 (279)
++ .++.|.+|++............+..... .....+..++|+| ++.+| ++...++.|.+||+.. .+.+..+.
T Consensus 204 ~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~sp-dG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~ 282 (347)
T 3hfq_A 204 AGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSH-DGHFLYVSNRGYNTLAVFAVTADGHLTLIQQIS 282 (347)
T ss_dssp EETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECT-TSCEEEEEEETTTEEEEEEECGGGCEEEEEEEE
T ss_pred EeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECC-CCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEe
Confidence 45 7899999999852222222222211101 1124588999999 77766 5666789999999973 25566666
Q ss_pred ecCCCEEEEEEccCCCC
Q 023672 263 GQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 263 ~~~~~v~~~~~spdg~~ 279 (279)
.+...+.+++|+|||++
T Consensus 283 ~~~~~~~~~~~spdg~~ 299 (347)
T 3hfq_A 283 TEGDFPRDFDLDPTEAF 299 (347)
T ss_dssp CSSSCCCEEEECTTSSE
T ss_pred cCCCCcCeEEECCCCCE
Confidence 66667899999999974
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.85 E-value=1e-19 Score=157.19 Aligned_cols=213 Identities=8% Similarity=-0.037 Sum_probs=141.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCC---ceEEEEEccCCCeEEEeeCC---------CeEEEEeCCCCcccccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNN---FLKGIKWSPDGSSFLTSSED---------KTLRIFSLPENGISYDVNACS 102 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~t~~~d---------g~i~iwd~~~~~~~~~~~~~~ 102 (279)
.+++||+.+++... .+.+|.. .|.+++|||||++|++++.+ +.+.+||+.++..... .
T Consensus 38 ~i~~~d~~~g~~~~------~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l-~--- 107 (723)
T 1xfd_A 38 TVRLWNVETNTSTV------LIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSL-D--- 107 (723)
T ss_dssp CEEEBCGGGCCCEE------EECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEEC-C---
T ss_pred CEEEEECCCCcEEE------EeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEec-c---
Confidence 57788888876643 3445554 49999999999999998764 7888999987643100 0
Q ss_pred ccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccc----c------
Q 023672 103 LAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD----E------ 172 (279)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~----~------ 172 (279)
....+...+..+ +|+|||+.|++++. +.|++||+.+++.......+...- .
T Consensus 108 -----------~~~~~~~~~~~~-------~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ 168 (723)
T 1xfd_A 108 -----------PPEVSNAKLQYA-------GWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYE 168 (723)
T ss_dssp -----------CTTCCSCCCSBC-------CBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHH
T ss_pred -----------CCcccccccccc-------EECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEE
Confidence 000111224444 45899999999886 789999999987766554322100 0
Q ss_pred ---ccceeeEEECCCCCEEEEe-cCC----------------------------------eEEEEEccCCCCceeeeeec
Q 023672 173 ---ITAAFSVAFNPTGTKIFAG-YNK----------------------------------SVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 173 ---~~~v~~~~~~~~~~~l~~~-~d~----------------------------------~i~~~d~~~~~~~~~~~~~~ 214 (279)
...+.+++|+|||+.|+.+ .++ .|++||+.++. ....+..
T Consensus 169 ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~-~~~~l~~- 246 (723)
T 1xfd_A 169 EEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPT-HDLEMMP- 246 (723)
T ss_dssp HTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSC-CCEECCC-
T ss_pred EEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCc-eeEEeeC-
Confidence 0123689999999998843 332 78899988732 1111110
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeC----CCcEEEEecCCCeEEEEEee-cCCCEE----EEEEccCCCC
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSY----SQTSAIYREDNMELLYVLHG-QEGGVT----HVSKLSSAYT 279 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~----dg~i~~wd~~~~~~~~~~~~-~~~~v~----~~~~spdg~~ 279 (279)
......+...+.+++|+| ++.+|++.+. +..|++||+.++++...+.. +...+. .++|||||++
T Consensus 247 ~~~~~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 319 (723)
T 1xfd_A 247 PDDPRMREYYITMVKWAT-STKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRK 319 (723)
T ss_dssp CCCGGGSSEEEEEEEESS-SSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCS
T ss_pred CccCCCccceeEEEEEeC-CCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCe
Confidence 001122356789999999 8888877643 35799999999987766654 344443 8899999974
No 137
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.85 E-value=1.5e-18 Score=137.23 Aligned_cols=208 Identities=8% Similarity=0.057 Sum_probs=142.7
Q ss_pred eeeEecCCCCcccceeeeeecc---CCCCCceEEEEEccCCCeEEEee--CCCeEEEEeCCCCccccccccccccCCCCc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTS---SIPNNFLKGIKWSPDGSSFLTSS--EDKTLRIFSLPENGISYDVNACSLAKDQDS 109 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~l~t~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 109 (279)
.+.+||..+++........... ......+.+++|+|+++++++++ .++.|.+||..+++.....
T Consensus 112 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~----------- 180 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAI----------- 180 (353)
T ss_dssp EEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEE-----------
T ss_pred EEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEe-----------
Confidence 5677888877765422210000 00011378999999999887765 4889999999876432111
Q ss_pred ccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE
Q 023672 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (279)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 189 (279)
...+..+. .++++|+++.+++++.++.|.+||+.+++....+..... +....+..++|+|+++.++
T Consensus 181 ------~~~~~~~~-------~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~ 246 (353)
T 3vgz_A 181 ------QNTGKMST-------GLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDD-GKEHFFINISLDTARQRAF 246 (353)
T ss_dssp ------CCCCTTCC-------CCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCS-SSCCCEEEEEEETTTTEEE
T ss_pred ------cCCCCccc-------eEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCC-CCCcccceEEECCCCCEEE
Confidence 00122233 345588999999999999999999999998877765321 1112567899999999877
Q ss_pred E-e-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEecCCCeEEEEEeecCC
Q 023672 190 A-G-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDNMELLYVLHGQEG 266 (279)
Q Consensus 190 ~-~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~ 266 (279)
+ + .++.|.+||+.++ +... .+.. +. ...++|+| ++. ++++...++.|.+||..+++.+..+... .
T Consensus 247 ~~~~~~~~v~~~d~~~~-~~~~---~~~~---~~---~~~~~~s~-dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~-~ 314 (353)
T 3vgz_A 247 ITDSKAAEVLVVDTRNG-NILA---KVAA---PE---SLAVLFNP-ARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTP-T 314 (353)
T ss_dssp EEESSSSEEEEEETTTC-CEEE---EEEC---SS---CCCEEEET-TTTEEEEEETTTTEEEEEETTTTEEEEEEECC-S
T ss_pred EEeCCCCEEEEEECCCC-cEEE---EEEc---CC---CceEEECC-CCCEEEEEECCCCeEEEEECCCCeEEEEEecC-C
Confidence 4 4 5699999999873 2222 2211 11 24689999 666 5555557899999999999998888754 4
Q ss_pred CEEEEEEccCCCC
Q 023672 267 GVTHVSKLSSAYT 279 (279)
Q Consensus 267 ~v~~~~~spdg~~ 279 (279)
.+.+++|+|||++
T Consensus 315 ~~~~~~~s~dg~~ 327 (353)
T 3vgz_A 315 HPNSLALSADGKT 327 (353)
T ss_dssp EEEEEEECTTSCE
T ss_pred CCCeEEEcCCCCE
Confidence 6899999999973
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=7.8e-19 Score=138.13 Aligned_cols=190 Identities=14% Similarity=0.123 Sum_probs=124.6
Q ss_pred ceEEEEEccCCCeEEEeeC-CCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE
Q 023672 62 FLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (279)
Q Consensus 62 ~v~~~~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (279)
.+.+++|+|++++|++++. ++.|.+||+..+..... .........+..+ +++|++++
T Consensus 85 ~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~---------------~~~~~~~~~~~~~-------~~s~dg~~ 142 (343)
T 1ri6_A 85 SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGV---------------VDVVEGLDGCHSA-------NISPDNRT 142 (343)
T ss_dssp CCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEE---------------EEEECCCTTBCCC-------EECTTSSE
T ss_pred CCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccc---------------cccccCCCCceEE-------EECCCCCE
Confidence 7899999999998876654 88999999952211000 0111122234444 45889988
Q ss_pred EEEec-CCCcEEEEECCC-CeeeEE----EeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeee
Q 023672 141 FASTT-RDHPIHLWDATT-GLLRCT----YRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYS 212 (279)
Q Consensus 141 l~s~~-~d~~i~i~d~~~-~~~~~~----~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~ 212 (279)
+++++ .++.|.+||+.+ ++.... +..... ..+.+++|+|++++++ ++ .++.|.+||+...........
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~ 218 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEG----AGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQ 218 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTT----CCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEE
T ss_pred EEEecCCCCEEEEEEecCCCceeeecccccccCCC----CCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEe
Confidence 87776 899999999987 654332 222111 2677899999999776 55 789999999964222222222
Q ss_pred ecccccCC--CCCceEEEEEccCCCcEEE-EEeCCCcEEEEecC--C--CeEEEEEeecCCCEEEEEEccCCCC
Q 023672 213 TLKGNKEG--QAGIMSAIAFSPTHTGMLA-IGSYSQTSAIYRED--N--MELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 213 ~~~~~~~~--~~~~v~~~~~sp~~~~~l~-~~~~dg~i~~wd~~--~--~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.......+ ....+..++|+| ++.+|+ ++..++.|.+||+. + .+.+..+..+.. +.+++|+|||++
T Consensus 219 ~~~~~~~~~~~~~~~~~i~~s~-dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~dg~~ 290 (343)
T 1ri6_A 219 TLDMMPENFSDTRWAADIHITP-DGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHSGKY 290 (343)
T ss_dssp EEECSCTTCCSCCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTTSSE
T ss_pred eccccCccccccCCccceEECC-CCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCCCCE
Confidence 22111111 134577899999 676555 56679999999998 3 345556665544 889999999973
No 139
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=1.3e-18 Score=136.82 Aligned_cols=207 Identities=7% Similarity=0.102 Sum_probs=131.7
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCC-CeEEEEeCC--CCccccccccccccCCCCccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSED-KTLRIFSLP--ENGISYDVNACSLAKDQDSYE 111 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d-g~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~ 111 (279)
.+.+|++........ . ....|...+.+++|+|++++|++++.+ +.|.+|++. ++....
T Consensus 16 ~v~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~--------------- 76 (343)
T 1ri6_A 16 QIHVWNLNHEGALTL---T-QVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTF--------------- 76 (343)
T ss_dssp EEEEEEECTTSCEEE---E-EEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEE---------------
T ss_pred eEEEEEECCCCcEEE---e-eeEecCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceee---------------
Confidence 467777743211111 1 122466779999999999999888876 999999997 332110
Q ss_pred ceeeecCCCceEEEEeeCcccccCCCCcEEEEec-CCCcEEEEECCC---CeeeEEEeccCccccccceeeEEECCCCCE
Q 023672 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTT-RDHPIHLWDATT---GLLRCTYRAYDAVDEITAAFSVAFNPTGTK 187 (279)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~i~d~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 187 (279)
.........+..++ ++|+++++++++ .++.|.+||+.+ .+....+.... .+.+++|+|++++
T Consensus 77 -~~~~~~~~~~~~~~-------~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~------~~~~~~~s~dg~~ 142 (343)
T 1ri6_A 77 -AAESALPGSLTHIS-------TDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD------GCHSANISPDNRT 142 (343)
T ss_dssp -EEEEECSSCCSEEE-------ECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT------TBCCCEECTTSSE
T ss_pred -ccccccCCCCcEEE-------EcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC------CceEEEECCCCCE
Confidence 01111122444444 488898776665 488899999943 33444443322 5788999999998
Q ss_pred EE-Ee-cCCeEEEEEccCCCCceeeee--ecccccCCCCCceEEEEEccCCCcEE-EEEeCCCcEEEEecCC--CeE--E
Q 023672 188 IF-AG-YNKSVRVFDVHRPGRDFEKYS--TLKGNKEGQAGIMSAIAFSPTHTGML-AIGSYSQTSAIYREDN--MEL--L 258 (279)
Q Consensus 188 l~-~~-~d~~i~~~d~~~~~~~~~~~~--~~~~~~~~~~~~v~~~~~sp~~~~~l-~~~~~dg~i~~wd~~~--~~~--~ 258 (279)
++ ++ .++.|++||+.+.+. ..... ... ......+..++|+| ++.+| +++..++.|.+||+.. ++. .
T Consensus 143 l~~~~~~~~~v~~~d~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~p-dg~~l~~~~~~~~~i~~~~~~~~~g~~~~~ 217 (343)
T 1ri6_A 143 LWVPALKQDRICLFTVSDDGH-LVAQDPAEVT---TVEGAGPRHMVFHP-NEQYAYCVNELNSSVDVWELKDPHGNIECV 217 (343)
T ss_dssp EEEEEGGGTEEEEEEECTTSC-EEEEEEEEEE---CSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEESSCTTSCCEEE
T ss_pred EEEecCCCCEEEEEEecCCCc-eeeecccccc---cCCCCCcceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCcEEEE
Confidence 77 45 799999999986322 22111 111 12234688899999 77755 4555889999999953 433 3
Q ss_pred EEEeec------CCCEEEEEEccCCCC
Q 023672 259 YVLHGQ------EGGVTHVSKLSSAYT 279 (279)
Q Consensus 259 ~~~~~~------~~~v~~~~~spdg~~ 279 (279)
..+... ...+.+++|+|||++
T Consensus 218 ~~~~~~~~~~~~~~~~~~i~~s~dg~~ 244 (343)
T 1ri6_A 218 QTLDMMPENFSDTRWAADIHITPDGRH 244 (343)
T ss_dssp EEEECSCTTCCSCCCEEEEEECTTSSE
T ss_pred eeccccCccccccCCccceEECCCCCE
Confidence 333311 235778999999963
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.84 E-value=1.3e-18 Score=137.48 Aligned_cols=210 Identities=10% Similarity=0.053 Sum_probs=142.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||..+++...... ....+.+++|+|++++++ +...++.|.+||..+++.......... ..
T Consensus 70 ~v~~~d~~~~~~~~~~~-------~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~----~~---- 134 (353)
T 3vgz_A 70 VVYRLDPVTLEVTQAIH-------NDLKPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDR----KR---- 134 (353)
T ss_dssp EEEEECTTTCCEEEEEE-------ESSCCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCC----CC----
T ss_pred cEEEEcCCCCeEEEEEe-------cCCCcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCC----cc----
Confidence 47778888777654322 123477899999999655 555589999999987654222110000 00
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEec--CCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTT--RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 191 (279)
........+..+. ++|+++.+++++ .++.|.+||+.+++....+..... .+.+++|+|+++.++++
T Consensus 135 ~~~~~~~~~~~~~-------~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~-----~~~~~~~s~dg~~l~~~ 202 (353)
T 3vgz_A 135 TEEVRPLQPRELV-------ADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK-----MSTGLALDSEGKRLYTT 202 (353)
T ss_dssp CSSCCCCEEEEEE-------EETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT-----TCCCCEEETTTTEEEEE
T ss_pred ccccCCCCCceEE-------ECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC-----ccceEEECCCCCEEEEE
Confidence 0000000134444 477888777665 478899999999998888774443 57789999999988865
Q ss_pred -cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEE-eCCCcEEEEecCCCeEEEEEeecCCCEE
Q 023672 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG-SYSQTSAIYREDNMELLYVLHGQEGGVT 269 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~v~ 269 (279)
.++.|.+||+.++ +....+.....++...+..++|+| ++..|+.+ ..++.|.+||+.+++.+..+.... ..
T Consensus 203 ~~~~~i~~~d~~~~----~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~--~~ 275 (353)
T 3vgz_A 203 NADGELITIDTADN----KILSRKKLLDDGKEHFFINISLDT-ARQRAFITDSKAAEVLVVDTRNGNILAKVAAPE--SL 275 (353)
T ss_dssp CTTSEEEEEETTTT----EEEEEEECCCSSSCCCEEEEEEET-TTTEEEEEESSSSEEEEEETTTCCEEEEEECSS--CC
T ss_pred cCCCeEEEEECCCC----eEEEEEEcCCCCCCcccceEEECC-CCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCC--Cc
Confidence 8999999999874 222222222234556788999999 66655554 455899999999999888887544 25
Q ss_pred EEEEccCCC
Q 023672 270 HVSKLSSAY 278 (279)
Q Consensus 270 ~~~~spdg~ 278 (279)
+++|+|||+
T Consensus 276 ~~~~s~dg~ 284 (353)
T 3vgz_A 276 AVLFNPARN 284 (353)
T ss_dssp CEEEETTTT
T ss_pred eEEECCCCC
Confidence 799999987
No 141
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=2.3e-18 Score=135.13 Aligned_cols=209 Identities=13% Similarity=0.037 Sum_probs=141.7
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCC-ceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNN-FLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+.+||..+++..... ..++.. .+.+++|+|++++++ +++.++.|.+||+.+++....
T Consensus 12 ~v~~~d~~~~~~~~~~-----~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~--------------- 71 (337)
T 1pby_B 12 KLVVIDTEKMAVDKVI-----TIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR--------------- 71 (337)
T ss_dssp EEEEEETTTTEEEEEE-----ECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE---------------
T ss_pred eEEEEECCCCcEEEEE-----EcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEee---------------
Confidence 5778898887765421 112222 478899999998664 566689999999987643211
Q ss_pred eeeecCCCceEEEEeeCcccccCCCCcEEEEec------------CCCcEEEEECCCCeeeEEEeccCccccccceeeEE
Q 023672 113 SLVVTEGESVYDFCWFPHMSASDPTSCVFASTT------------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA 180 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~ 180 (279)
+....... ..-.|..++++|+++.+++++ .++.|.+||+.+++....+.... .+.+++
T Consensus 72 -~~~~~~~~---~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~------~~~~~~ 141 (337)
T 1pby_B 72 -IDLSTPEE---RVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR------QITMLA 141 (337)
T ss_dssp -EECCBTTE---EEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS------SCCCEE
T ss_pred -EEcCCccc---ccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC------CcceeE
Confidence 11111000 011234456689999888886 57999999999998877776533 567899
Q ss_pred ECCCCCEEEEecCCeEEEEEccCCCCceeeeeecc--c------------------------------------------
Q 023672 181 FNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLK--G------------------------------------------ 216 (279)
Q Consensus 181 ~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~--~------------------------------------------ 216 (279)
|+|++++++++ ++.|++||+.++ +.......-. .
T Consensus 142 ~s~dg~~l~~~-~~~i~~~d~~~~-~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (337)
T 1pby_B 142 WARDGSKLYGL-GRDLHVMDPEAG-TLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRT 219 (337)
T ss_dssp ECTTSSCEEEE-SSSEEEEETTTT-EEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEE
T ss_pred ECCCCCEEEEe-CCeEEEEECCCC-cEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeecccccccccccccccc
Confidence 99999988866 788999999863 2111110000 0
Q ss_pred ---------------ccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 217 ---------------NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 217 ---------------~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
....+...+.+++|+| ++.+|+++ ++.|++||+.+++.+..+..+ ..+.+++|+|||++
T Consensus 220 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~-dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~ 293 (337)
T 1pby_B 220 GLLTMDLETGEMAMREVRIMDVFYFSTAVNP-AKTRAFGA--YNVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGST 293 (337)
T ss_dssp EEEEEETTTCCEEEEEEEECSSCEEEEEECT-TSSEEEEE--ESEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCE
T ss_pred ceEEEeCCCCCceEeecCCCCCceeeEEECC-CCCEEEEe--CCeEEEEECCCCcCcceecCC-CceeeEEECCCCCE
Confidence 0011223456799999 88888877 689999999999988877743 46789999999973
No 142
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=1.6e-19 Score=156.44 Aligned_cols=197 Identities=12% Similarity=0.085 Sum_probs=131.0
Q ss_pred CCceEEEEEccCCCeEEEeeC-CC-----eEEEEeCCCCccccccccccccCCCC------ccc-ceeeecCCCceEEEE
Q 023672 60 NNFLKGIKWSPDGSSFLTSSE-DK-----TLRIFSLPENGISYDVNACSLAKDQD------SYE-ASLVVTEGESVYDFC 126 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~-dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~------~~~-~~~~~~~~~~v~~~~ 126 (279)
...|.+++|+|||++|++++. |+ .|.+||+.+++............... ... ..........+..
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~-- 113 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD-- 113 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC--
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce--
Confidence 456999999999999999998 88 99999998875432211110000000 000 0000000011333
Q ss_pred eeCcccccCCCCcEEEEecCCCcEEEEECCCCe--eeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCC
Q 023672 127 WFPHMSASDPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRP 204 (279)
Q Consensus 127 ~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~ 204 (279)
++|+|||++|++++. +.|.+||+.++. ....+..+.. .+..++|+|||+.|+.+.++.|++||+.++
T Consensus 114 -----~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~-----~~~~~~~SPDG~~la~~~~~~i~~~d~~~g 182 (741)
T 2ecf_A 114 -----YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEG-----FATDAKLSPKGGFVSFIRGRNLWVIDLASG 182 (741)
T ss_dssp -----CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSS-----CEEEEEECTTSSEEEEEETTEEEEEETTTT
T ss_pred -----eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCc-----ccccccCCCCCCEEEEEeCCcEEEEecCCC
Confidence 456899999999886 899999999872 2333433333 788999999999999777789999999873
Q ss_pred CCceeeeeecccccCCCCC----------------ceEEEEEccCCCcEEEEEeCCC-----------------------
Q 023672 205 GRDFEKYSTLKGNKEGQAG----------------IMSAIAFSPTHTGMLAIGSYSQ----------------------- 245 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~----------------~v~~~~~sp~~~~~l~~~~~dg----------------------- 245 (279)
. ..... ..+.. .+.+++||| +|..|++++.|+
T Consensus 183 -~---~~~~~----~~~~~~~~~g~~~~v~~~~~~~~~~~~~Sp-Dg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~ 253 (741)
T 2ecf_A 183 -R---QMQLT----ADGSTTIGNGIAEFVADEEMDRHTGYWWAP-DDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRY 253 (741)
T ss_dssp -E---EEECC----CCCCSSEEESCCCHHHHHHSCCCCSEEECT-TSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEEC
T ss_pred -C---EEEec----cCCccceeccccceeeeeccccccceEECC-CCCEEEEEEEcCCCCceEecCCCCCCcccceEeec
Confidence 1 11111 11111 247899999 888888887665
Q ss_pred ----------cEEEEecCC-CeEEEEEe--ecCCCEEEEEEccCCCC
Q 023672 246 ----------TSAIYREDN-MELLYVLH--GQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 246 ----------~i~~wd~~~-~~~~~~~~--~~~~~v~~~~~spdg~~ 279 (279)
.|++||+.+ ++...... .|...+.+++| |||++
T Consensus 254 ~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~ 299 (741)
T 2ecf_A 254 PAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQH 299 (741)
T ss_dssp CBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTE
T ss_pred CCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCE
Confidence 789999988 87654432 36678999999 99973
No 143
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.83 E-value=4.3e-19 Score=153.78 Aligned_cols=182 Identities=10% Similarity=0.073 Sum_probs=129.4
Q ss_pred ceEEEEEccCCCeEEEeeCCCeEEEEeCCCC---ccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPEN---GISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 62 ~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
.|.+++|+|||++|++++. +.|.+||+.++ ... ....+...+..+.| +|||
T Consensus 110 ~v~~~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~------------------~l~~~~~~~~~~~~-------SPDG 163 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVR------------------QLTHGEGFATDAKL-------SPKG 163 (741)
T ss_dssp ESCCCEECTTSSEEEEEET-TEEEEEESSSCSTTSCC------------------BCCCSSSCEEEEEE-------CTTS
T ss_pred CcceeEECCCCCEEEEEeC-CcEEEEECCCCCcceEE------------------EcccCCcccccccC-------CCCC
Confidence 4889999999999999886 99999999875 221 11223456777766 8899
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccc-----------cccceeeEEECCCCCEEEEe-cCC------------
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD-----------EITAAFSVAFNPTGTKIFAG-YNK------------ 194 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~-----------~~~~v~~~~~~~~~~~l~~~-~d~------------ 194 (279)
++|++++ ++.|++||+.+++...........- ....+.++.|+|||+.|+.+ .|+
T Consensus 164 ~~la~~~-~~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~ 242 (741)
T 2ecf_A 164 GFVSFIR-GRNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVY 242 (741)
T ss_dssp SEEEEEE-TTEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEEC
T ss_pred CEEEEEe-CCcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCC
Confidence 9999887 4689999999887654433222100 00014789999999988854 544
Q ss_pred ---------------------eEEEEEccC-CCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC-----CCcE
Q 023672 195 ---------------------SVRVFDVHR-PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-----SQTS 247 (279)
Q Consensus 195 ---------------------~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~-----dg~i 247 (279)
.|++||+.+ +.. ..+... ..|...+.+++| | ++..|+.++. +..|
T Consensus 243 p~~~~~~~~~~~~~g~~~~~~~l~~~d~~~~~~~--~~~~~~----~~~~~~~~~~~~-p-Dg~~l~~~~~~~~~~~~~i 314 (741)
T 2ecf_A 243 ADRTDVIEQRYPAAGDANVQVKLGVISPAEQAQT--QWIDLG----KEQDIYLARVNW-R-DPQHLSFQRQSRDQKKLDL 314 (741)
T ss_dssp SSCEEEEEEECCBTTSCCCEEEEEEECSSTTCCC--EEECCC----SCSSEEEEEEEE-E-ETTEEEEEEEETTSSEEEE
T ss_pred CCcccceEeecCCCCCCCCeeEEEEEECCCCCce--EEecCC----CCcceEEEEEEe-C-CCCEEEEEEecccCCeEEE
Confidence 788889876 421 111110 246778999999 9 8888876653 5679
Q ss_pred EEEecCCCeEEEEEeecCC----CEEEEEEccCCC
Q 023672 248 AIYREDNMELLYVLHGQEG----GVTHVSKLSSAY 278 (279)
Q Consensus 248 ~~wd~~~~~~~~~~~~~~~----~v~~~~~spdg~ 278 (279)
++||+.++++...+..+.. .+.+++|+|||+
T Consensus 315 ~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~spdg~ 349 (741)
T 2ecf_A 315 VEVTLASNQQRVLAHETSPTWVPLHNSLRFLDDGS 349 (741)
T ss_dssp EEEETTTCCEEEEEEEECSSCCCCCSCCEECTTSC
T ss_pred EEEECCCCceEEEEEcCCCCcCCcCCceEECCCCe
Confidence 9999999998877776653 456899999996
No 144
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.83 E-value=1.7e-18 Score=144.29 Aligned_cols=180 Identities=13% Similarity=-0.018 Sum_probs=134.3
Q ss_pred EEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecC
Q 023672 67 KWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR 146 (279)
Q Consensus 67 ~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~ 146 (279)
+|+|++.++++++.|++|.+||..+++.... +.. +..+..+ +++|++++|++++.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~----------------i~~--g~~~~~v-------~~spdg~~l~v~~~ 198 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKV----------------IDT--GYAVHIS-------RMSASGRYLLVIGR 198 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEE----------------EEC--STTEEEE-------EECTTSCEEEEEET
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEE----------------Eec--CcccceE-------EECCCCCEEEEECC
Confidence 3889999999999999999999987654211 111 2224444 45899999999999
Q ss_pred CCcEEEEEC--CCCeeeEEEeccCccccccceeeEEECC----CCCEEEEe--cCCeEEEEEccCCCCceeeeeeccccc
Q 023672 147 DHPIHLWDA--TTGLLRCTYRAYDAVDEITAAFSVAFNP----TGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (279)
Q Consensus 147 d~~i~i~d~--~~~~~~~~~~~~~~~~~~~~v~~~~~~~----~~~~l~~~--~d~~i~~~d~~~~~~~~~~~~~~~~~~ 218 (279)
|+.|.+||+ .+++.+..+.... .+..++|+| +|++++++ .++.|.+||..+ .+....+.......
T Consensus 199 d~~V~v~D~~~~t~~~~~~i~~g~------~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t-~~~~~~i~~~g~~~ 271 (543)
T 1nir_A 199 DARIDMIDLWAKEPTKVAEIKIGI------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGET-LEPKQIVSTRGMTV 271 (543)
T ss_dssp TSEEEEEETTSSSCEEEEEEECCS------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTT-CCEEEEEECCEECS
T ss_pred CCeEEEEECcCCCCcEEEEEecCC------CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccc-cccceeecccCccc
Confidence 999999999 8888888877543 678999999 99999855 589999999987 33333322110000
Q ss_pred C---CCC-CceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEE--EEeecCCCEEEEEEccCCCC
Q 023672 219 E---GQA-GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY--VLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 219 ~---~~~-~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~--~~~~~~~~v~~~~~spdg~~ 279 (279)
. .|. ..+.++.++|++..++++...++.|.+||+.+.+.+. .+. +...+.+++|+|||+|
T Consensus 272 ~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~-~~~~~~~~~~spdg~~ 337 (543)
T 1nir_A 272 DTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIG-AAPFLHDGGWDSSHRY 337 (543)
T ss_dssp SSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEE-CCSSCCCEEECTTSCE
T ss_pred CccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEec-cCcCccCceECCCCCE
Confidence 0 122 3688999999667788888899999999998876543 443 5667889999999985
No 145
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.82 E-value=1.8e-18 Score=135.63 Aligned_cols=206 Identities=10% Similarity=0.144 Sum_probs=132.5
Q ss_pred eeeEecCCCCcc-cceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCC---eEEEEeCCCCccccccccccccCCCCcc
Q 023672 35 PLIRFDVPPHRT-YHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDK---TLRIFSLPENGISYDVNACSLAKDQDSY 110 (279)
Q Consensus 35 ~~~~~d~~~~~~-~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg---~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 110 (279)
.+++||..++.. .. .+..+.....+++|+|++++|+++..++ .|.+||+.+++...
T Consensus 63 ~i~~~d~~~~~~~~~------~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~-------------- 122 (331)
T 3u4y_A 63 TLVQIETQLEPPKVV------AIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFIS-------------- 122 (331)
T ss_dssp EEEEEECSSSSCEEE------EEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEE--------------
T ss_pred eEEEEECCCCceeEE------ecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEE--------------
Confidence 567788877765 32 3344555555599999999999665553 89999998764321
Q ss_pred cceeeecCCCceEEEEeeCcccccCCCCcEEEEe-cCCCc-EEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEE
Q 023672 111 EASLVVTEGESVYDFCWFPHMSASDPTSCVFAST-TRDHP-IHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKI 188 (279)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~-~~d~~-i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 188 (279)
....+.....+.| +|++++++++ ..++. |.+|++.....+.... .........+..++|+|+|+++
T Consensus 123 ----~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~spdg~~l 190 (331)
T 3u4y_A 123 ----TIPIPYDAVGIAI-------SPNGNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFISGGTRPFNITFTPDGNFA 190 (331)
T ss_dssp ----EEECCTTEEEEEE-------CTTSSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEECSSSSEEEEEECTTSSEE
T ss_pred ----EEECCCCccceEE-------CCCCCEEEEEecCCCceEEEEEECCCCcEeecC-CccccCCCCccceEECCCCCEE
Confidence 1112233455554 8888755554 55688 9999997643322111 0000111257899999999976
Q ss_pred E-Ee-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEE-EeCCCcEEEEecCCCeE--EEEEee
Q 023672 189 F-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAI-GSYSQTSAIYREDNMEL--LYVLHG 263 (279)
Q Consensus 189 ~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~-~~~dg~i~~wd~~~~~~--~~~~~~ 263 (279)
+ ++ .++.|++||+.++ ........+. ....+..++|+| ++.+|+. ...++.|.+||+.+++. +..+..
T Consensus 191 ~v~~~~~~~v~v~d~~~~-~~~~~~~~~~-----~~~~~~~~~~sp-dg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~ 263 (331)
T 3u4y_A 191 FVANLIGNSIGILETQNP-ENITLLNAVG-----TNNLPGTIVVSR-DGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGH 263 (331)
T ss_dssp EEEETTTTEEEEEECSST-TSCEEEEEEE-----CSSCCCCEEECT-TSSEEEEECSSEEEEEEEETTTTEEEEEEEEEC
T ss_pred EEEeCCCCeEEEEECCCC-cccceeeecc-----CCCCCceEEECC-CCCEEEEEEcCCCEEEEEECCCCceeeeccccc
Confidence 6 55 7899999999873 3311122331 235577899999 7775554 44578899999999887 444443
Q ss_pred c----CC---CEEEEEEccCCCC
Q 023672 264 Q----EG---GVTHVSKLSSAYT 279 (279)
Q Consensus 264 ~----~~---~v~~~~~spdg~~ 279 (279)
+ .. ...+++|+|||++
T Consensus 264 ~~~~~~~~~~~~~~~~~spdg~~ 286 (331)
T 3u4y_A 264 GLLIDPRPLFGANQMALNKTETK 286 (331)
T ss_dssp CCCCCCGGGTTCCCEEECTTSSE
T ss_pred ccccCCCCcccccceEECCCCCE
Confidence 2 11 2356899999974
No 146
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=8.3e-20 Score=157.78 Aligned_cols=187 Identities=13% Similarity=0.060 Sum_probs=128.4
Q ss_pred ceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCC---ceEEEEeeCcccccCCCC
Q 023672 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGE---SVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 62 ~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~v~~~~~~~~~~~~~~~~ 138 (279)
.+.+++|+|||+++++ +.||+|++||+.+++... +...+.. .|..+.| +|||
T Consensus 18 ~~~~~~~spdg~~~~~-~~dg~i~~~d~~~g~~~~-----------------~~~~~~~~~~~v~~~~~-------SpDg 72 (723)
T 1xfd_A 18 HDPEAKWISDTEFIYR-EQKGTVRLWNVETNTSTV-----------------LIEGKKIESLRAIRYEI-------SPDR 72 (723)
T ss_dssp CCCCCCBSSSSCBCCC-CSSSCEEEBCGGGCCCEE-----------------EECTTTTTTTTCSEEEE-------CTTS
T ss_pred cccccEEcCCCcEEEE-eCCCCEEEEECCCCcEEE-----------------EeccccccccccceEEE-------CCCC
Confidence 3678899999997766 789999999998764321 1111111 3556655 8899
Q ss_pred cEEEEecCC---------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCcee
Q 023672 139 CVFASTTRD---------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFE 209 (279)
Q Consensus 139 ~~l~s~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~ 209 (279)
++|++++.+ +.|.+||+.+++. ..+.... .+...+..++|+|||+.|+.+.++.|++||+.++ ....
T Consensus 73 ~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~--~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g-~~~~ 148 (723)
T 1xfd_A 73 EYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDPPE--VSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGK-QAIR 148 (723)
T ss_dssp SEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCCTT--CCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSS-CCEE
T ss_pred CEEEEEecCccceeecceeeEEEEECCCCce-EeccCCc--cccccccccEECCCCCEEEEEECCeEEEEECCCC-ceEE
Confidence 999998764 6788999998875 3333221 1111477899999999999776689999999873 2221
Q ss_pred eeeecccc--cCCC---------CCceEEEEEccCCCcEEEEEeCCC---------------------------------
Q 023672 210 KYSTLKGN--KEGQ---------AGIMSAIAFSPTHTGMLAIGSYSQ--------------------------------- 245 (279)
Q Consensus 210 ~~~~~~~~--~~~~---------~~~v~~~~~sp~~~~~l~~~~~dg--------------------------------- 245 (279)
....-... ..++ ...+.+++||| +|..|++++.|+
T Consensus 149 ~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~Sp-Dg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~ 227 (723)
T 1xfd_A 149 VVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSP-DGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPS 227 (723)
T ss_dssp EECCCBTTTEEEEECCHHHHHTTSSSSEEEEECT-TSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCE
T ss_pred EecCCCCCceECcccceeEEEEeccCcceEEECC-CCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCe
Confidence 11000000 0000 01237899999 888888887543
Q ss_pred -cEEEEecCCCeEEEEEeec------CCCEEEEEEccCCC
Q 023672 246 -TSAIYREDNMELLYVLHGQ------EGGVTHVSKLSSAY 278 (279)
Q Consensus 246 -~i~~wd~~~~~~~~~~~~~------~~~v~~~~~spdg~ 278 (279)
.|++||+.+++....+..+ ...+.+++|||||+
T Consensus 228 ~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~ 267 (723)
T 1xfd_A 228 ISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTK 267 (723)
T ss_dssp EEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSE
T ss_pred eEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCe
Confidence 7999999998865666654 56789999999996
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.82 E-value=2.2e-18 Score=148.53 Aligned_cols=185 Identities=16% Similarity=0.192 Sum_probs=124.7
Q ss_pred eEEEEEccCCCeEEEee---------------------------------CCCeEEEEeCCCCccccccccccccCCCCc
Q 023672 63 LKGIKWSPDGSSFLTSS---------------------------------EDKTLRIFSLPENGISYDVNACSLAKDQDS 109 (279)
Q Consensus 63 v~~~~~~~~~~~l~t~~---------------------------------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~ 109 (279)
+.+++|+|||++|++++ .+..|.+||+.++......
T Consensus 183 ~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~----------- 251 (706)
T 2z3z_A 183 EKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQ----------- 251 (706)
T ss_dssp CCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECC-----------
T ss_pred CceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeec-----------
Confidence 58999999999999887 4467999999865431100
Q ss_pred ccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCC-----cEEEEECCCCeeeEEEeccCccccccceeeEEECC-
Q 023672 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDH-----PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP- 183 (279)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~- 183 (279)
....+...+..+.| +|+|+.|++++.++ .|.+||+.+++....+...........+.++.|+|
T Consensus 252 ----~~~~~~~~~~~~~~-------spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~ 320 (706)
T 2z3z_A 252 ----TGEPKEKFLTNLSW-------SPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPG 320 (706)
T ss_dssp ----CCSCTTCEEEEEEE-------CTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTT
T ss_pred ----cCCCCceeEeeEEE-------ECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecC
Confidence 00123345777776 78999999887665 89999999984333332221111111246789999
Q ss_pred -CCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEE-EEEccCCCcEE-EEEeCCC----cEEEEecCCC
Q 023672 184 -TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSA-IAFSPTHTGML-AIGSYSQ----TSAIYREDNM 255 (279)
Q Consensus 184 -~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~sp~~~~~l-~~~~~dg----~i~~wd~~~~ 255 (279)
+|++++++ .++.++||++...+.. ...+ ..+...+.. ++|+| ++..| ++++.++ .|+.||+.++
T Consensus 321 ~dg~~l~~~~~~g~~~l~~~~~~~~~---~~~l----~~~~~~v~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~~~~ 392 (706)
T 2z3z_A 321 SNNQFIWQSRRDGWNHLYLYDTTGRL---IRQV----TKGEWEVTNFAGFDP-KGTRLYFESTEASPLERHFYCIDIKGG 392 (706)
T ss_dssp CSSEEEEEECTTSSCEEEEEETTSCE---EEEC----CCSSSCEEEEEEECT-TSSEEEEEESSSCTTCBEEEEEETTCC
T ss_pred CCCEEEEEEccCCccEEEEEECCCCE---EEec----CCCCeEEEeeeEEcC-CCCEEEEEecCCCCceEEEEEEEcCCC
Confidence 99988866 8899999988732322 2223 355666766 79999 66655 4555554 5777787776
Q ss_pred eEEEEEeecCCCEEEEEEccCCCC
Q 023672 256 ELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 256 ~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
+ +..+. +...+.+++|||||++
T Consensus 393 ~-~~~l~-~~~~~~~~~~spdg~~ 414 (706)
T 2z3z_A 393 K-TKDLT-PESGMHRTQLSPDGSA 414 (706)
T ss_dssp C-CEESC-CSSSEEEEEECTTSSE
T ss_pred C-ceecc-CCCceEEEEECCCCCE
Confidence 5 33444 6678999999999974
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.82 E-value=1e-18 Score=156.56 Aligned_cols=178 Identities=11% Similarity=0.085 Sum_probs=136.0
Q ss_pred CCCceEEEEEc-cCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCC-ceEEEEeeCcccccCC
Q 023672 59 PNNFLKGIKWS-PDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGE-SVYDFCWFPHMSASDP 136 (279)
Q Consensus 59 h~~~v~~~~~~-~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~v~~~~~~~~~~~~~~ 136 (279)
|.+.|.+++|+ |||++|++++ ++.|.+|++.++.... + ..+.. .+..+.| +
T Consensus 294 ~~~~v~~~~~S~pdG~~la~~~-~~~i~~~~~~~~~~~~-----------------~-~~~~~~~~~~~~~-------s- 346 (1045)
T 1k32_A 294 SIPSKFAEDFSPLDGDLIAFVS-RGQAFIQDVSGTYVLK-----------------V-PEPLRIRYVRRGG-------D- 346 (1045)
T ss_dssp ECGGGGEEEEEECGGGCEEEEE-TTEEEEECTTSSBEEE-----------------C-SCCSCEEEEEECS-------S-
T ss_pred cccccceeeecCCCCCEEEEEE-cCEEEEEcCCCCceEE-----------------c-cCCCcceEEeeeE-------c-
Confidence 44579999999 9999999888 7899999987653210 1 11222 4555554 7
Q ss_pred CCcEEEEecCCCcEE-EEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeec
Q 023672 137 TSCVFASTTRDHPIH-LWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 137 ~~~~l~s~~~d~~i~-i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
+++.|++++.+..+. +||+.+++... +..+.. .+..++|+|+|+.|+.+ .++.|++||+.++ . .....
T Consensus 347 dg~~l~~~s~~~~l~~~~d~~~~~~~~-l~~~~~-----~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg-~---~~~~~ 416 (1045)
T 1k32_A 347 TKVAFIHGTREGDFLGIYDYRTGKAEK-FEENLG-----NVFAMGVDRNGKFAVVANDRFEIMTVDLETG-K---PTVIE 416 (1045)
T ss_dssp SEEEEEEEETTEEEEEEEETTTCCEEE-CCCCCC-----SEEEEEECTTSSEEEEEETTSEEEEEETTTC-C---EEEEE
T ss_pred CCCeEEEEECCCceEEEEECCCCCceE-ecCCcc-----ceeeeEECCCCCEEEEECCCCeEEEEECCCC-c---eEEec
Confidence 898999988888888 99998776443 333332 78899999999999865 8899999999873 2 11122
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeCCC----------cEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ----------TSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg----------~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.+|...+.+++|+| ++.+|++++.++ .|++||+.+++ +..+..|...+.+++|+|||++
T Consensus 417 ----~~~~~~v~~~~~Sp-DG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~ 485 (1045)
T 1k32_A 417 ----RSREAMITDFTISD-NSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKN 485 (1045)
T ss_dssp ----ECSSSCCCCEEECT-TSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCE
T ss_pred ----cCCCCCccceEECC-CCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCE
Confidence 36777889999999 888888877644 89999999887 6677778888999999999973
No 149
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=1.3e-18 Score=149.90 Aligned_cols=218 Identities=12% Similarity=0.093 Sum_probs=142.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCC-----CccccccccccccCCCCc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPE-----NGISYDVNACSLAKDQDS 109 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~ 109 (279)
.+++||+.+++.. .+..+...+.+++|+|||++|+++ .|+.|.+||+.+ +......... ...
T Consensus 102 ~i~~~d~~~~~~~-------~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~-----~~~ 168 (706)
T 2z3z_A 102 GLVGFDMLARKVT-------YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDG-----TET 168 (706)
T ss_dssp EEEEEETTTTEEE-------EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCC-----BTT
T ss_pred EEEEEECCCCceE-------EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCC-----CCC
Confidence 5678888776553 233456778999999999999985 689999999987 5332110000 000
Q ss_pred cc--ceeeecCCCceEEEEeeCcccccCCCCcEEEEec---------------------------------CCCcEEEEE
Q 023672 110 YE--ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTT---------------------------------RDHPIHLWD 154 (279)
Q Consensus 110 ~~--~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~---------------------------------~d~~i~i~d 154 (279)
.. ......+...+..+. |+|||++|++++ .+..|.+||
T Consensus 169 ~~~g~~~~~ee~~~~~~~~-------~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d 241 (706)
T 2z3z_A 169 LVYGQAVHQREFGIEKGTF-------WSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYH 241 (706)
T ss_dssp EEESSCCGGGCTTCCCSEE-------ECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEE
T ss_pred eEcccchhhhhcCCCceEE-------ECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEE
Confidence 00 000001111234444 488999999987 446799999
Q ss_pred CCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCC-----eEEEEEccCCCCceeeeeecccccCCCCCceEEE
Q 023672 155 ATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNK-----SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAI 228 (279)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~-----~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (279)
+.+++........ .+...+.+++|+|+|+.|+++ .++ .|++||+.++ .....+... ........+.++
T Consensus 242 ~~~~~~~~~~~~~---~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g-~~~~~~~~~--~~~~~~~~~~~~ 315 (706)
T 2z3z_A 242 LATGKTVYLQTGE---PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETG-RFVRTLFVE--TDKHYVEPLHPL 315 (706)
T ss_dssp TTTTEEEECCCCS---CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTC-CEEEEEEEE--ECSSCCCCCSCC
T ss_pred CCCCceEeeccCC---CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCC-ceeeEEEEc--cCCCeECccCCc
Confidence 9988764433211 111268899999999988854 554 8999999873 122222111 001111234678
Q ss_pred EEcc-CCCcEEEEEeCCCcEEEEecC-CCeEEEEEeecCCCEEE-EEEccCCC
Q 023672 229 AFSP-THTGMLAIGSYSQTSAIYRED-NMELLYVLHGQEGGVTH-VSKLSSAY 278 (279)
Q Consensus 229 ~~sp-~~~~~l~~~~~dg~i~~wd~~-~~~~~~~~~~~~~~v~~-~~~spdg~ 278 (279)
+|+| +++.+|++++.|+.++||++. ++..+..+..+...+.+ ++|+|||+
T Consensus 316 ~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~ 368 (706)
T 2z3z_A 316 TFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGT 368 (706)
T ss_dssp EECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSS
T ss_pred eeecCCCCEEEEEEccCCccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCC
Confidence 9999 245688999999999999886 67777888888778887 89999996
No 150
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.81 E-value=8.8e-18 Score=132.64 Aligned_cols=212 Identities=13% Similarity=0.082 Sum_probs=129.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeC---CCeEEEEeCCCCccccccccccccCCCCccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSE---DKTLRIFSLPENGISYDVNACSLAKDQDSYE 111 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~---dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 111 (279)
.++.||..++..... ....+...+..++|+|+|+ |++++. ++.|.+|++.++.....
T Consensus 19 ~v~~~d~~tg~~~~~-----~~~~~~~~p~~~a~spdg~-l~~~~~~~~~~~v~~~~~~~g~~~~~-------------- 78 (347)
T 3hfq_A 19 YQGTLDTTAKTLTND-----GLLAATQNPTYLALSAKDC-LYSVDKEDDEGGIAAWQIDGQTAHKL-------------- 78 (347)
T ss_dssp EEEEEETTTTEEEEE-----EEEEECSCCCCEEECTTCE-EEEEEEETTEEEEEEEEEETTEEEEE--------------
T ss_pred EEEEEcCCCCeEEEe-----eeeeccCCcceEEEccCCe-EEEEEecCCCceEEEEEecCCcEEEe--------------
Confidence 355666666654321 1223446678899999999 655544 68999999975432100
Q ss_pred ceeeecCCCceEEEEeeCcccccCCCCcEEEEec-CCCcEEEEECC-CCe--eeEEEeccCcc----ccccceeeEEECC
Q 023672 112 ASLVVTEGESVYDFCWFPHMSASDPTSCVFASTT-RDHPIHLWDAT-TGL--LRCTYRAYDAV----DEITAAFSVAFNP 183 (279)
Q Consensus 112 ~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~i~d~~-~~~--~~~~~~~~~~~----~~~~~v~~~~~~~ 183 (279)
. ....+...+.. ++++|++++|++++ .++.|.+|++. ++. .+..+...... .....+.+++|+|
T Consensus 79 ~-~~~~~~~~p~~-------~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~sp 150 (347)
T 3hfq_A 79 N-TVVAPGTPPAY-------VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTP 150 (347)
T ss_dssp E-EEEEESCCCSE-------EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECT
T ss_pred e-eeecCCCCCEE-------EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECC
Confidence 0 00112223333 45588999888877 67899999996 333 23333221110 0112477899999
Q ss_pred CCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcE-EEEEeCCCcEEEEecCC--CeE--
Q 023672 184 TGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM-LAIGSYSQTSAIYREDN--MEL-- 257 (279)
Q Consensus 184 ~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~-l~~~~~dg~i~~wd~~~--~~~-- 257 (279)
+|+++++. .++.|++||+...+. ......+. ......+..++|+| ++.+ ++++..++.|.+|++.. ++.
T Consensus 151 dg~l~v~~~~~~~v~~~~~~~~g~-~~~~~~~~---~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~ 225 (347)
T 3hfq_A 151 DNRLAVIDLGSDKVYVYNVSDAGQ-LSEQSVLT---MEAGFGPRHLVFSP-DGQYAFLAGELSSQIASLKYDTQTGAFTQ 225 (347)
T ss_dssp TSCEEEEETTTTEEEEEEECTTSC-EEEEEEEE---CCTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEEETTTTEEEE
T ss_pred CCcEEEEeCCCCEEEEEEECCCCc-EEEeeeEE---cCCCCCCceEEECC-CCCEEEEEeCCCCEEEEEEecCCCCceEE
Confidence 99955565 788999999984232 22221111 11223577899999 7774 44566788999999874 543
Q ss_pred EEEEeecC------CCEEEEEEccCCCC
Q 023672 258 LYVLHGQE------GGVTHVSKLSSAYT 279 (279)
Q Consensus 258 ~~~~~~~~------~~v~~~~~spdg~~ 279 (279)
+..+.... ..+.+++|+|||++
T Consensus 226 ~~~~~~~~~~~~~~~~~~~i~~spdG~~ 253 (347)
T 3hfq_A 226 LGIVKTIPADYTAHNGAAAIRLSHDGHF 253 (347)
T ss_dssp EEEEESSCTTCCSCCEEEEEEECTTSCE
T ss_pred eeeeeecCCCCCCCCcceeEEECCCCCE
Confidence 33343332 34889999999974
No 151
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.80 E-value=1.2e-19 Score=156.71 Aligned_cols=209 Identities=12% Similarity=0.107 Sum_probs=138.0
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCC---ceEEEEEccCCCeEEEeeC---------CCeEEEEeCCCCcccccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNN---FLKGIKWSPDGSSFLTSSE---------DKTLRIFSLPENGISYDVNACS 102 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~---~v~~~~~~~~~~~l~t~~~---------dg~i~iwd~~~~~~~~~~~~~~ 102 (279)
.+++||+.+++... .+.+|.. .|.+++|||||++|++++. |+.|++||+.++...... .
T Consensus 37 ~i~~~~~~~g~~~~------~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~---~ 107 (719)
T 1z68_A 37 NIVLYNIETGQSYT------ILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGN---E 107 (719)
T ss_dssp CEEEEESSSCCEEE------EECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSS---C
T ss_pred CEEEEEcCCCcEEE------EEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccce---e
Confidence 57788888877654 2333322 4899999999999998876 789999999876431000 0
Q ss_pred ccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCcc----ccc-----
Q 023672 103 LAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV----DEI----- 173 (279)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~----~~~----- 173 (279)
+ ...+..+.| ||||+.|+++. ++.|++||+.+++........... +..
T Consensus 108 -----------l----~~~~~~~~~-------SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ 164 (719)
T 1z68_A 108 -----------L----PRPIQYLCW-------SPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYE 164 (719)
T ss_dssp -----------C----CSSBCCEEE-------CSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHH
T ss_pred -----------c----CcccccceE-------CCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceee
Confidence 0 123455555 88999999886 789999999988765432111100 000
Q ss_pred ----cceeeEEECCCCCEEEEe-cC-C---------------------------------eEEEEEccCCCCce--eeee
Q 023672 174 ----TAAFSVAFNPTGTKIFAG-YN-K---------------------------------SVRVFDVHRPGRDF--EKYS 212 (279)
Q Consensus 174 ----~~v~~~~~~~~~~~l~~~-~d-~---------------------------------~i~~~d~~~~~~~~--~~~~ 212 (279)
....+++|+|||+.|+.+ .| + .|++||+.++ ... ..+
T Consensus 165 ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~-~~~~~~~~- 242 (719)
T 1z68_A 165 EEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP-AYVGPQEV- 242 (719)
T ss_dssp HHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH-HHHCCEEC-
T ss_pred eecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC-CccceeEc-
Confidence 012489999999999843 33 1 7889999863 110 000
Q ss_pred ecccccCCCCCceEEEEEccCCCcEEEEEeCC----CcEEEEe----cCCCeEEEEE----eecCCCEE-----EEEEcc
Q 023672 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS----QTSAIYR----EDNMELLYVL----HGQEGGVT-----HVSKLS 275 (279)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d----g~i~~wd----~~~~~~~~~~----~~~~~~v~-----~~~~sp 275 (279)
.....+.+|...+.+++|+| ++.++++.... ..|.+|| +.++++...+ ..|...+. .++|+|
T Consensus 243 ~~~~~~~~~~~~~~~~~~Sp-D~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~sp 321 (719)
T 1z68_A 243 PVPAMIASSDYYFSWLTWVT-DERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSY 321 (719)
T ss_dssp CCCHHHHTSCEEEEEEEESS-SSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECT
T ss_pred cCCccCCCCcceEEEeEEeC-CCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECC
Confidence 00011246777899999999 68877775432 2488999 8887765444 46777776 899999
Q ss_pred CCC
Q 023672 276 SAY 278 (279)
Q Consensus 276 dg~ 278 (279)
||+
T Consensus 322 dg~ 324 (719)
T 1z68_A 322 DAI 324 (719)
T ss_dssp TSS
T ss_pred CCC
Confidence 997
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=2.4e-16 Score=125.09 Aligned_cols=198 Identities=11% Similarity=0.131 Sum_probs=121.6
Q ss_pred CCceEEEEEccCCCeEEEee-CCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 60 NNFLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
...+.+++|+|+|++|++++ .++.|.+|++............... ..........+.....+ +|+|++
T Consensus 154 ~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~~~~~~~-------~~spdg 222 (361)
T 3scy_A 154 MPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTK----GTPEAFKVAPGSGPRHL-------IFNSDG 222 (361)
T ss_dssp SCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEE----EEEEEEECCTTCCEEEE-------EECTTS
T ss_pred CCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeec----ccccceecCCCCCCeEE-------EEcCCC
Confidence 34568899999999776555 4889999998753210000000000 00001122233334445 458899
Q ss_pred cEEEEec-CCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE-e-c-CCeEEEEEccCCCCceeeeeec
Q 023672 139 CVFASTT-RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-G-Y-NKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 139 ~~l~s~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~-~-d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
+++++++ .++.|.+|++.+++................+..++|+|+|++|++ . . ++.|.+|++............+
T Consensus 223 ~~l~v~~~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~ 302 (361)
T 3scy_A 223 KFAYLINEIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQ 302 (361)
T ss_dssp SEEEEEETTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEE
T ss_pred CEEEEEcCCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEe
Confidence 9877766 689999999987765332222211111124679999999998874 4 4 5899999997322223333333
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEe-CCCcEEEE--ecCCCeEEEEE-eecCCCEEEEEEc
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIY--REDNMELLYVL-HGQEGGVTHVSKL 274 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~~w--d~~~~~~~~~~-~~~~~~v~~~~~s 274 (279)
. . ...+.+++|+| ++.+|++++ .++.|.+| |..++++.... ..+...+.+++|.
T Consensus 303 ~----~-g~~~~~~~~sp-dg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 303 L----T-GIHPRNFIITP-NGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp E----C-SSCCCEEEECT-TSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred c----C-CCCCceEEECC-CCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 1 2 34678999999 888777776 67889996 55577765433 2244578999986
No 153
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.79 E-value=6.2e-17 Score=128.36 Aligned_cols=89 Identities=11% Similarity=0.194 Sum_probs=69.7
Q ss_pred EEECCCCCEEEEe-c-----------CCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCc
Q 023672 179 VAFNPTGTKIFAG-Y-----------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT 246 (279)
Q Consensus 179 ~~~~~~~~~l~~~-~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~ 246 (279)
++|+|+++.+++. . ++.|.+||+.+. +....+ ..+. +.+++|+| ++.+|++++. +.
T Consensus 259 ~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~----~~v~~i----~~~~--p~~ia~sp-dg~~l~v~n~-~~ 326 (361)
T 2oiz_A 259 VGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTK----QRVARI----PGRD--ALSMTIDQ-QRNLMLTLDG-GN 326 (361)
T ss_dssp EEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTT----EEEEEE----ECTT--CCEEEEET-TTTEEEEECS-SC
T ss_pred EEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCC----cEEEEE----ecCC--eeEEEECC-CCCEEEEeCC-Ce
Confidence 6788887777743 3 347999998873 333343 2333 88999999 8888888886 99
Q ss_pred EEEEecCCC--eEEEEEeecCCCEEEEEEccCCCC
Q 023672 247 SAIYREDNM--ELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 247 i~~wd~~~~--~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
|.+||..++ +.+..+..+......++++|||++
T Consensus 327 v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~~ 361 (361)
T 2oiz_A 327 VNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGGT 361 (361)
T ss_dssp EEEEECSSSSCEEEEEETTSCSSEEEEEECCCSCC
T ss_pred EEEEECCCCcceeeEEeccCCCCcEEEEecCCCCC
Confidence 999999999 999888667778899999999985
No 154
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.78 E-value=6.5e-17 Score=126.81 Aligned_cols=192 Identities=16% Similarity=0.149 Sum_probs=122.1
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEee------------CCCeEEEEeCCCCcccccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSS------------EDKTLRIFSLPENGISYDVNACS 102 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~------------~dg~i~iwd~~~~~~~~~~~~~~ 102 (279)
.+.+||+.+++........ ....|...+.+++|+|++++|++++ .++.|.+||+.+++.....
T Consensus 57 ~v~~~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~---- 131 (337)
T 1pby_B 57 SLVKIDLVTGETLGRIDLS-TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF---- 131 (337)
T ss_dssp EEEEEETTTCCEEEEEECC-BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE----
T ss_pred eEEEEECCCCCeEeeEEcC-CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEE----
Confidence 5778888877765422110 0000223577899999999998886 5799999999876432111
Q ss_pred ccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccC--c-----------
Q 023672 103 LAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYD--A----------- 169 (279)
Q Consensus 103 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~--~----------- 169 (279)
..+..+..+ +++|++++|+++ ++.|.+||+.+++....+.... .
T Consensus 132 --------------~~~~~~~~~-------~~s~dg~~l~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l 188 (337)
T 1pby_B 132 --------------EAPRQITML-------AWARDGSKLYGL--GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAV 188 (337)
T ss_dssp --------------ECCSSCCCE-------EECTTSSCEEEE--SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCC
T ss_pred --------------eCCCCccee-------EECCCCCEEEEe--CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEE
Confidence 011112222 335555555554 4556666665555443333221 0
Q ss_pred ------------------------------------------------cccccceeeEEECCCCCEEEEecCCeEEEEEc
Q 023672 170 ------------------------------------------------VDEITAAFSVAFNPTGTKIFAGYNKSVRVFDV 201 (279)
Q Consensus 170 ------------------------------------------------~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~ 201 (279)
......+.+++|+|++++++++ ++.|.+||+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~v~~~d~ 267 (337)
T 1pby_B 189 WNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA-YNVLESFDL 267 (337)
T ss_dssp CCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE-ESEEEEEET
T ss_pred eeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe-CCeEEEEEC
Confidence 0000135579999999999877 799999999
Q ss_pred cCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC
Q 023672 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE 265 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~ 265 (279)
.++ +....+. ....+.+++|+| ++.+|++++.++.|++||+.+++.+..+..+.
T Consensus 268 ~~~----~~~~~~~-----~~~~~~~~~~s~-dg~~l~~~~~~~~i~v~d~~~~~~~~~~~~~~ 321 (337)
T 1pby_B 268 EKN----ASIKRVP-----LPHSYYSVNVST-DGSTVWLGGALGDLAAYDAETLEKKGQVDLPG 321 (337)
T ss_dssp TTT----EEEEEEE-----CSSCCCEEEECT-TSCEEEEESBSSEEEEEETTTCCEEEEEECGG
T ss_pred CCC----cCcceec-----CCCceeeEEECC-CCCEEEEEcCCCcEEEEECcCCcEEEEEEcCC
Confidence 873 2222221 123578999999 88888888889999999999999988887653
No 155
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.78 E-value=1.7e-16 Score=126.00 Aligned_cols=212 Identities=12% Similarity=0.109 Sum_probs=126.9
Q ss_pred CCCceEEEEEccCCCeEEEeeCC----CeEEEEeCCC--Ccccc--cc-----ccccccCC---------CCcccceeee
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSED----KTLRIFSLPE--NGISY--DV-----NACSLAKD---------QDSYEASLVV 116 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~d----g~i~iwd~~~--~~~~~--~~-----~~~~~~~~---------~~~~~~~~~~ 116 (279)
+...+..++|+|++++|++++.+ +.|.+|++.. +.... .. ..+.+... .+..+..+..
T Consensus 48 ~~~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~ 127 (361)
T 3scy_A 48 EVANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPI 127 (361)
T ss_dssp ECSCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEB
T ss_pred cCCCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEe
Confidence 56677889999999999988876 7999999865 32211 00 00100000 0011111111
Q ss_pred cCCCceEEE----Ee-------------eCcccccCCCCcEEEEe-cCCCcEEEEECCCCee------e------EEEec
Q 023672 117 TEGESVYDF----CW-------------FPHMSASDPTSCVFAST-TRDHPIHLWDATTGLL------R------CTYRA 166 (279)
Q Consensus 117 ~~~~~v~~~----~~-------------~~~~~~~~~~~~~l~s~-~~d~~i~i~d~~~~~~------~------~~~~~ 166 (279)
...+.+..+ .. ++.+++++|++++++++ ..++.|.+|++..... + .....
T Consensus 128 ~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~ 207 (361)
T 3scy_A 128 GQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKV 207 (361)
T ss_dssp CTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEEC
T ss_pred CCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceec
Confidence 111111000 00 01336789999966555 4588999998875431 1 11111
Q ss_pred cCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC-
Q 023672 167 YDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY- 243 (279)
Q Consensus 167 ~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~- 243 (279)
... ..+..++|+|+|++++ ++ .++.|.+||+.++ . ......+.. ...+...+..++|+| ++++|+++..
T Consensus 208 ~~~----~~~~~~~~spdg~~l~v~~~~~~~v~v~~~~~g-~-~~~~~~~~~-~~~~~~~~~~i~~sp-dg~~l~v~~~~ 279 (361)
T 3scy_A 208 APG----SGPRHLIFNSDGKFAYLINEIGGTVIAFRYADG-M-LDEIQTVAA-DTVNAQGSGDIHLSP-DGKYLYASNRL 279 (361)
T ss_dssp CTT----CCEEEEEECTTSSEEEEEETTTCEEEEEEEETT-E-EEEEEEEES-CSSCCCCEEEEEECT-TSSEEEEEECS
T ss_pred CCC----CCCeEEEEcCCCCEEEEEcCCCCeEEEEEecCC-c-eEEeEEEec-CCCCCCCcccEEECC-CCCEEEEECCC
Confidence 111 1567899999999887 45 6899999999853 1 222222211 123344578999999 8887766554
Q ss_pred -CCcEEEEecC--CCe--EEEEEeecCCCEEEEEEccCCCC
Q 023672 244 -SQTSAIYRED--NME--LLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 244 -dg~i~~wd~~--~~~--~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
++.|.+|++. +++ .+..+.. ...+.+++|+|||++
T Consensus 280 ~~~~i~v~~~~~~~g~~~~~~~~~~-g~~~~~~~~spdg~~ 319 (361)
T 3scy_A 280 KADGVAIFKVDETNGTLTKVGYQLT-GIHPRNFIITPNGKY 319 (361)
T ss_dssp SSCEEEEEEECTTTCCEEEEEEEEC-SSCCCEEEECTTSCE
T ss_pred CCCEEEEEEEcCCCCcEEEeeEecC-CCCCceEEECCCCCE
Confidence 4889999995 444 4455554 457889999999974
No 156
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.78 E-value=4.8e-19 Score=152.98 Aligned_cols=181 Identities=10% Similarity=0.109 Sum_probs=122.7
Q ss_pred EEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCC---CceEEEEeeCcccccCCCCcEE
Q 023672 65 GIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEG---ESVYDFCWFPHMSASDPTSCVF 141 (279)
Q Consensus 65 ~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~v~~~~~~~~~~~~~~~~~~l 141 (279)
+++|+|+++++++ +.|++|++||+.++..... ...+. ..+..+.| ||||++|
T Consensus 20 ~~~~s~dg~~~~~-~~d~~i~~~~~~~g~~~~~-----------------~~~~~~~~~~~~~~~~-------SpDg~~l 74 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SADNNIVLYNIETGQSYTI-----------------LSNRTMKSVNASNYGL-------SPDRQFV 74 (719)
T ss_dssp CCEESSSSEEEEE-CTTSCEEEEESSSCCEEEE-----------------ECHHHHHTTTCSEEEE-------CTTSSEE
T ss_pred ccEECCCCeEEEE-cCCCCEEEEEcCCCcEEEE-----------------EccccccccceeeEEE-------CCCCCeE
Confidence 6799999965554 4699999999987653211 11111 12555555 8899999
Q ss_pred EEecC---------CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeee
Q 023672 142 ASTTR---------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (279)
Q Consensus 142 ~s~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~ 212 (279)
++++. ++.|++||+.+++.+...... . .+..++|+|||+.|+.+.++.|++||+.++ .......
T Consensus 75 a~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~-~-----~~~~~~~SPDG~~la~~~~~~i~~~~~~~g-~~~~l~~ 147 (719)
T 1z68_A 75 YLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP-R-----PIQYLCWSPVGSKLAYVYQNNIYLKQRPGD-PPFQITF 147 (719)
T ss_dssp EEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC-S-----SBCCEEECSSTTCEEEEETTEEEEESSTTS-CCEECCC
T ss_pred EEEecCceeEEeecceEEEEEECCCCccccceecC-c-----ccccceECCCCCEEEEEECCeEEEEeCCCC-CcEEEec
Confidence 98876 789999999998763111111 1 577899999999999778899999999874 2211100
Q ss_pred ecc--cccCCCCCc---------eEEEEEccCCCcEEEEEeCCC----------------------------------cE
Q 023672 213 TLK--GNKEGQAGI---------MSAIAFSPTHTGMLAIGSYSQ----------------------------------TS 247 (279)
Q Consensus 213 ~~~--~~~~~~~~~---------v~~~~~sp~~~~~l~~~~~dg----------------------------------~i 247 (279)
.-. ....++... ..+++||| +|..|++++.|. .|
T Consensus 148 ~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP-DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l 226 (719)
T 1z68_A 148 NGRENKIFNGIPDWVYEEEMLATKYALWWSP-NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRI 226 (719)
T ss_dssp CCBTTTEEESSCCHHHHHHTTCSSCCEEECT-TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEE
T ss_pred CCCcCCeEcccccceeeeecccCcccEEECC-CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEE
Confidence 000 000122211 25899999 899999887552 78
Q ss_pred EEEecCCCeEE--EE------EeecCCCEEEEEEccCCC
Q 023672 248 AIYREDNMELL--YV------LHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 248 ~~wd~~~~~~~--~~------~~~~~~~v~~~~~spdg~ 278 (279)
++||+.+++.. .. +.+|...+.+++|||||+
T Consensus 227 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 227 FIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 89999888752 11 234677899999999985
No 157
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.78 E-value=4.1e-16 Score=123.98 Aligned_cols=191 Identities=12% Similarity=0.112 Sum_probs=123.9
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCC-CCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLP-ENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (279)
+...+..++|+|++++|++++.+ .|.+|++. ++..... ......+ .|..++++|+
T Consensus 38 ~~~~~~~~a~spdg~~l~~~~~~-~v~~~~~~~~g~~~~~----------------~~~~~~g-------~~~~~~~spd 93 (365)
T 1jof_A 38 QDEPISWMTFDHERKNIYGAAMK-KWSSFAVKSPTEIVHE----------------ASHPIGG-------HPRANDADTN 93 (365)
T ss_dssp TTCCCSEEEECTTSSEEEEEEBT-EEEEEEEEETTEEEEE----------------EEEECCS-------SGGGGCTTSC
T ss_pred CCCCCcEEEECCCCCEEEEEccc-eEEEEEECCCCCEEEe----------------eEeecCC-------CCccEEECCC
Confidence 33467899999999999999888 99999986 4432100 0000001 1444678999
Q ss_pred CcE--EEEec-------------CCCcEEEEECC-CCeeeEEEeccCccccccceeeEEECCCCCEEEEe--cCCeEEEE
Q 023672 138 SCV--FASTT-------------RDHPIHLWDAT-TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVF 199 (279)
Q Consensus 138 ~~~--l~s~~-------------~d~~i~i~d~~-~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~~~ 199 (279)
+++ +++++ .++.+.+|++. +++....+..... .....+.+++|+|+|++++++ .++.|++|
T Consensus 94 g~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~-~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~ 172 (365)
T 1jof_A 94 TRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEY-QENTGIHGMVFDPTETYLYSADLTANKLWTH 172 (365)
T ss_dssp CEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEe-CCCCcceEEEECCCCCEEEEEcCCCCEEEEE
Confidence 994 55554 68999999997 4655444332100 011267899999999988854 57899999
Q ss_pred Ecc-CCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC-CCcEEEEecC--CCeEE---EEEee-------cC
Q 023672 200 DVH-RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-SQTSAIYRED--NMELL---YVLHG-------QE 265 (279)
Q Consensus 200 d~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~-dg~i~~wd~~--~~~~~---~~~~~-------~~ 265 (279)
|+. ++ + ......+. ...|...+..++|+| ++++|++++. ++.|.+|++. +++.. ..+.. |.
T Consensus 173 ~~~~~g-~-~~~~~~~~--~~~~g~~p~~~~~sp-dg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~ 247 (365)
T 1jof_A 173 RKLASG-E-VELVGSVD--APDPGDHPRWVAMHP-TGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRD 247 (365)
T ss_dssp EECTTS-C-EEEEEEEE--CSSTTCCEEEEEECT-TSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBC
T ss_pred EECCCC-C-EEEeeeEe--cCCCCCCCCEeEECC-CCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcc
Confidence 998 42 2 12111221 012345688999999 8887777664 7889999865 56543 22321 12
Q ss_pred C------CEEEEE-EccCCCC
Q 023672 266 G------GVTHVS-KLSSAYT 279 (279)
Q Consensus 266 ~------~v~~~~-~spdg~~ 279 (279)
. .+.+++ |+|||++
T Consensus 248 ~~~~~~~~~~~i~~~spdG~~ 268 (365)
T 1jof_A 248 PETGKGLYRADVCALTFSGKY 268 (365)
T ss_dssp TTTSSBSEEEEEEEECTTSSE
T ss_pred cccccccccccEEEECCCCCE
Confidence 1 488999 9999974
No 158
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.76 E-value=9e-17 Score=144.09 Aligned_cols=171 Identities=13% Similarity=0.069 Sum_probs=128.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCC-ceEEEEEccCCCeEEEeeCCCeEE-EEeCCCCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNN-FLKGIKWSPDGSSFLTSSEDKTLR-IFSLPENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~-~v~~~~~~~~~~~l~t~~~dg~i~-iwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+++|+...+... .+..|.+ .+..++|+ ||+.|++++.++.+. +|++.++...
T Consensus 318 ~i~~~~~~~~~~~-------~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~----------------- 372 (1045)
T 1k32_A 318 QAFIQDVSGTYVL-------KVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE----------------- 372 (1045)
T ss_dssp EEEEECTTSSBEE-------ECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-----------------
T ss_pred EEEEEcCCCCceE-------EccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-----------------
Confidence 3455665554432 3556777 89999999 999999999888888 8998764321
Q ss_pred eeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-
Q 023672 113 SLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 191 (279)
.+. .+...+..++| +|+|++|++++.++.|++||+.+++....+..+.. .+.+++|+|+|++|+.+
T Consensus 373 ~l~-~~~~~~~~~~~-------SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~-----~v~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 373 KFE-ENLGNVFAMGV-------DRNGKFAVVANDRFEIMTVDLETGKPTVIERSREA-----MITDFTISDNSRFIAYGF 439 (1045)
T ss_dssp ECC-CCCCSEEEEEE-------CTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSS-----CCCCEEECTTSCEEEEEE
T ss_pred Eec-CCccceeeeEE-------CCCCCEEEEECCCCeEEEEECCCCceEEeccCCCC-----CccceEECCCCCeEEEEe
Confidence 012 34456777766 88999999999999999999999988777655554 77899999999998844
Q ss_pred cC----------CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC
Q 023672 192 YN----------KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (279)
Q Consensus 192 ~d----------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~ 253 (279)
.+ +.|++||+.++ + ...+ ..|...+.+++|+| +|..|+.++.++...+|+..
T Consensus 440 ~~~~~~~~~~~~~~i~l~d~~~g----~-~~~l----~~~~~~~~~~~~sp-dG~~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 440 PLKHGETDGYVMQAIHVYDMEGR----K-IFAA----TTENSHDYAPAFDA-DSKNLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp EECSSTTCSCCEEEEEEEETTTT----E-EEEC----SCSSSBEEEEEECT-TSCEEEEEESCCCCCEECSS
T ss_pred cCccccccCCCCCeEEEEECCCC----c-EEEe----eCCCcccCCceEcC-CCCEEEEEecccCCcCcchh
Confidence 43 48999999873 1 2223 46677788999999 88999988887777777643
No 159
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.76 E-value=1.4e-17 Score=140.40 Aligned_cols=175 Identities=13% Similarity=0.049 Sum_probs=118.0
Q ss_pred CCceEEEEEccCCCeEEEeeC-CCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 60 NNFLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
..+|.+++|+|||++||+++. ||+++||++.++.... +..++...+..+.| +|+
T Consensus 21 ~~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~-----------------lt~~~~~~~~~~~~-------spd- 75 (582)
T 3o4h_A 21 AVEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVK-----------------LNREPINSVLDPHY-------GVG- 75 (582)
T ss_dssp HSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEE-----------------CCSSCCSEECEECT-------TCS-
T ss_pred ccchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEe-----------------eecccccccccccC-------CCC-
Confidence 345999999999999998887 9999999986543211 11222235666655 777
Q ss_pred cEEEEecC---CCcEEEEECCC---CeeeEEEeccCccccccceeeEEECCCCCEE--EEecCCeEEEEEccCCCCceee
Q 023672 139 CVFASTTR---DHPIHLWDATT---GLLRCTYRAYDAVDEITAAFSVAFNPTGTKI--FAGYNKSVRVFDVHRPGRDFEK 210 (279)
Q Consensus 139 ~~l~s~~~---d~~i~i~d~~~---~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l--~~~~d~~i~~~d~~~~~~~~~~ 210 (279)
+++++++. +....+|.+.. +... .+.... .+...+|+|+++.+ +++.++.+.+||+.++ .. .
T Consensus 76 ~~l~~~~~~~g~~~~~l~~~~~~~~g~~~-~l~~~~------~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g-~~-~- 145 (582)
T 3o4h_A 76 RVILVRDVSKGAEQHALFKVNTSRPGEEQ-RLEAVK------PMRILSGVDTGEAVVFTGATEDRVALYALDGG-GL-R- 145 (582)
T ss_dssp EEEEEEECSTTSCCEEEEEEETTSTTCCE-ECTTSC------SBEEEEEEECSSCEEEEEECSSCEEEEEEETT-EE-E-
T ss_pred eEEEEeccCCCCcceEEEEEeccCCCccc-cccCCC------CceeeeeCCCCCeEEEEecCCCCceEEEccCC-cE-E-
Confidence 67777765 45556655432 3222 332222 33456888887643 3455566669999873 21 1
Q ss_pred eeecccccCCCCCceEEEEEccCCCcEEEEEeCC----CcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 211 YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS----QTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d----g~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
.+. .+.. .+++||| +|.+|++++.+ +.|++||+.+++.. .+..|.+.+.+++|||||++
T Consensus 146 --~l~----~~~~--~~~~~sp-DG~~la~~~~~~~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~ 208 (582)
T 3o4h_A 146 --ELA----RLPG--FGFVSDI-RGDLIAGLGFFGGGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKV 208 (582)
T ss_dssp --EEE----EESS--CEEEEEE-ETTEEEEEEEEETTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCE
T ss_pred --Eee----cCCC--ceEEECC-CCCEEEEEEEcCCCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCE
Confidence 111 1112 7899999 89999988777 77999999988765 67778888999999999974
No 160
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.75 E-value=2.2e-17 Score=143.01 Aligned_cols=186 Identities=15% Similarity=0.203 Sum_probs=122.3
Q ss_pred ceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEE
Q 023672 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (279)
Q Consensus 62 ~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (279)
...+++|+||+++|+++ |++|++||+.++........... ........++ ++||||++|
T Consensus 18 ~~~~~~w~~dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~-------~~Spdg~~l 76 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ--ENNILVFNAEYGNSSVFLENSTF------------DEFGHSINDY-------SISPDGQFI 76 (740)
T ss_dssp CCCCEEECSSSEEEEEE--TTEEEEEETTTCCEEEEECTTTT------------TTCCSCCCEE-------EECTTSSEE
T ss_pred cccccEECCCCcEEEEc--CCcEEEEECCCCceEEEEechhh------------hhhcccccce-------EECCCCCEE
Confidence 46689999999988886 99999999998754211100000 0000011223 448999999
Q ss_pred EEecCC---------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeee
Q 023672 142 ASTTRD---------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYS 212 (279)
Q Consensus 142 ~s~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~ 212 (279)
++++.+ +.+.+||+.+++... +..+.. .+...+|||||+.|+.+.++.|++||+.++ .... +
T Consensus 77 ~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~~~-----~~~~~~~SPdG~~la~~~~~~i~~~~~~~~-~~~~-l- 147 (740)
T 4a5s_A 77 LLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERIPN-----NTQWVTWSPVGHKLAYVWNNDIYVKIEPNL-PSYR-I- 147 (740)
T ss_dssp EEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCT-----TEEEEEECSSTTCEEEEETTEEEEESSTTS-CCEE-C-
T ss_pred EEEECCeeeEEEccceEEEEEECCCCcEEE-cccCCC-----cceeeEECCCCCEEEEEECCeEEEEECCCC-ceEE-E-
Confidence 998876 556799999988643 333332 678999999999999778899999999873 2111 1
Q ss_pred eccc----ccCCCC---------CceEEEEEccCCCcEEEEEeCCC----------------------------------
Q 023672 213 TLKG----NKEGQA---------GIMSAIAFSPTHTGMLAIGSYSQ---------------------------------- 245 (279)
Q Consensus 213 ~~~~----~~~~~~---------~~v~~~~~sp~~~~~l~~~~~dg---------------------------------- 245 (279)
+... ...++. +....+.||| +|..|+.++.|.
T Consensus 148 t~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSp-Dg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~ 226 (740)
T 4a5s_A 148 TWTGKEDIIYNGITDWVYEEEVFSAYSALWWSP-NGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNP 226 (740)
T ss_dssp CSCCBTTTEEESBCCHHHHHHTSSSSBCEEECT-TSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCC
T ss_pred cCCCCccceecCcccccccchhcCCCcceEECC-CCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCC
Confidence 1100 001111 1223589999 888888775322
Q ss_pred --cEEEEecCC---Ce--EEEEEee------cCCCEEEEEEccCCC
Q 023672 246 --TSAIYREDN---ME--LLYVLHG------QEGGVTHVSKLSSAY 278 (279)
Q Consensus 246 --~i~~wd~~~---~~--~~~~~~~------~~~~v~~~~~spdg~ 278 (279)
.|++||+.+ ++ ....+.. |...+..++|||||+
T Consensus 227 ~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~ 272 (740)
T 4a5s_A 227 TVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQER 272 (740)
T ss_dssp EEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTE
T ss_pred eeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCe
Confidence 488899988 73 2233432 667799999999996
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.75 E-value=2.5e-16 Score=124.14 Aligned_cols=189 Identities=14% Similarity=0.152 Sum_probs=126.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCC-----CCceEEEEEccCCCeEEEeeCC------------CeEEEEeCCCCccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIP-----NNFLKGIKWSPDGSSFLTSSED------------KTLRIFSLPENGISYD 97 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h-----~~~v~~~~~~~~~~~l~t~~~d------------g~i~iwd~~~~~~~~~ 97 (279)
.+.+||+.+++...... .++ ...+.+++|+|+|++|++++.+ +.|.+||+.+++....
T Consensus 66 ~i~~~d~~t~~~~~~~~-----~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~ 140 (349)
T 1jmx_B 66 DIYGIDLDTCKNTFHAN-----LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKP 140 (349)
T ss_dssp EEEEEETTTTEEEEEEE-----SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCC
T ss_pred cEEEEeCCCCcEEEEEE-----cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccce
Confidence 46778887776543211 112 2347889999999999988865 8999999986432111
Q ss_pred cccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccc------
Q 023672 98 VNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD------ 171 (279)
Q Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~------ 171 (279)
. ........+.+++ ++|+++ +++++ +.|.+||+.+++....+.......
T Consensus 141 ~---------------~~~~~~~~~~~~~-------~s~dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 195 (349)
T 1jmx_B 141 V---------------RTFPMPRQVYLMR-------AADDGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAP 195 (349)
T ss_dssp S---------------EEEECCSSCCCEE-------ECTTSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCC
T ss_pred e---------------eeccCCCccccee-------ECCCCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCc
Confidence 0 1111222344444 488898 55554 349999999988777665432000
Q ss_pred ---------------------------------------------------------cccceeeEEECC-CCCEEEEecC
Q 023672 172 ---------------------------------------------------------EITAAFSVAFNP-TGTKIFAGYN 193 (279)
Q Consensus 172 ---------------------------------------------------------~~~~v~~~~~~~-~~~~l~~~~d 193 (279)
....+..++|+| ++++++++ +
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~-~ 274 (349)
T 1jmx_B 196 DVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV-L 274 (349)
T ss_dssp BCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE-E
T ss_pred cceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE-c
Confidence 001345678889 99999877 8
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ 264 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 264 (279)
+.|.+||+.++ +....+. ....+.+++|+| ++..|++++.++.|++||+.+++.+..++..
T Consensus 275 ~~v~~~d~~~~----~~~~~~~-----~~~~~~~~~~s~-dg~~l~~~~~~~~v~v~d~~~~~~~~~~~~~ 335 (349)
T 1jmx_B 275 NRLAKYDLKQR----KLIKAAN-----LDHTYYCVAFDK-KGDKLYLGGTFNDLAVFNPDTLEKVKNIKLP 335 (349)
T ss_dssp SEEEEEETTTT----EEEEEEE-----CSSCCCEEEECS-SSSCEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred CeEEEEECccC----eEEEEEc-----CCCCccceEECC-CCCEEEEecCCCeEEEEeccccceeeeeecC
Confidence 99999999873 2222221 123467899999 7777777888999999999999998888755
No 162
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.74 E-value=9.8e-17 Score=127.59 Aligned_cols=193 Identities=12% Similarity=0.099 Sum_probs=120.9
Q ss_pred eEEEEEccCCCe--EEEee-------------CCCeEEEEeCCC-CccccccccccccCCCCcccceeeecCCCceEEEE
Q 023672 63 LKGIKWSPDGSS--FLTSS-------------EDKTLRIFSLPE-NGISYDVNACSLAKDQDSYEASLVVTEGESVYDFC 126 (279)
Q Consensus 63 v~~~~~~~~~~~--l~t~~-------------~dg~i~iwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 126 (279)
+.+++|+|+|++ +++++ .+|++.+|++.. +...... ......+...+..+.
T Consensus 85 ~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~-------------~~~~~~~~~~~~~~~ 151 (365)
T 1jof_A 85 PRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV-------------QNYEYQENTGIHGMV 151 (365)
T ss_dssp GGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE-------------EEEECCTTCCEEEEE
T ss_pred CccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE-------------eeEEeCCCCcceEEE
Confidence 556899999994 55553 689999999974 3221100 000011334455555
Q ss_pred eeCcccccCCCCcEEEEec-CCCcEEEEECC-CCeeeE--EEeccCccccccceeeEEECCCCCEEEE-e-cCCeEEEEE
Q 023672 127 WFPHMSASDPTSCVFASTT-RDHPIHLWDAT-TGLLRC--TYRAYDAVDEITAAFSVAFNPTGTKIFA-G-YNKSVRVFD 200 (279)
Q Consensus 127 ~~~~~~~~~~~~~~l~s~~-~d~~i~i~d~~-~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~-~d~~i~~~d 200 (279)
| +|+|+++++++ .++.|.+|++. +++... .+.... +...+..++|+|+|+++++ + .++.|.+|+
T Consensus 152 ~-------spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~---~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~ 221 (365)
T 1jof_A 152 F-------DPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD---PGDHPRWVAMHPTGNYLYALMEAGNRICEYV 221 (365)
T ss_dssp E-------CTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS---TTCCEEEEEECTTSSEEEEEETTTTEEEEEE
T ss_pred E-------CCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC---CCCCCCEeEECCCCCEEEEEECCCCeEEEEE
Confidence 5 88999887765 46799999998 676532 222111 0116789999999998874 4 578999998
Q ss_pred ccCC-CCce---eeeeecccccCCCCC------ceEEEE-EccCCCcEEEEEeCC-C-----cEEEEecC-CCeEEE---
Q 023672 201 VHRP-GRDF---EKYSTLKGNKEGQAG------IMSAIA-FSPTHTGMLAIGSYS-Q-----TSAIYRED-NMELLY--- 259 (279)
Q Consensus 201 ~~~~-~~~~---~~~~~~~~~~~~~~~------~v~~~~-~sp~~~~~l~~~~~d-g-----~i~~wd~~-~~~~~~--- 259 (279)
+... +... ..+..+.....+|.. .+..++ |+| ++++|++++.+ + .|.+|++. ++++..
T Consensus 222 ~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~sp-dG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~ 300 (365)
T 1jof_A 222 IDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTF-SGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLF 300 (365)
T ss_dssp ECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECT-TSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEE
T ss_pred EeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECC-CCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeee
Confidence 8631 2211 112222211123332 588999 999 88877766543 2 89999996 666543
Q ss_pred EEeecCCCEEEEEEcc---CCCC
Q 023672 260 VLHGQEGGVTHVSKLS---SAYT 279 (279)
Q Consensus 260 ~~~~~~~~v~~~~~sp---dg~~ 279 (279)
.+..+...+..++|+| ||++
T Consensus 301 ~~~~~~~~~~~~a~sp~~~dg~~ 323 (365)
T 1jof_A 301 LSPTPTSGGHSNAVSPCPWSDEW 323 (365)
T ss_dssp EEECSSCCTTCCCEEECTTCTTE
T ss_pred eeecCCCCcccceecCCCcCCCE
Confidence 2333555677899999 7864
No 163
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.74 E-value=2.8e-16 Score=123.80 Aligned_cols=166 Identities=10% Similarity=0.044 Sum_probs=112.0
Q ss_pred EEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEE-EE
Q 023672 65 GIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF-AS 143 (279)
Q Consensus 65 ~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l-~s 143 (279)
++++++++.++++++.++.|.+||+.+++.... +.......+..+ +++|+++.+ ++
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~----------------~~~~~~~~~~~~-------~~s~dg~~~~v~ 60 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKS----------------CVMPDKFGPGTA-------MMAPDNRTAYVL 60 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEE----------------EECSSCCSSCEE-------EECTTSSEEEEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEE----------------EecCCCCCCcee-------EECCCCCEEEEE
Confidence 456788888999999999999999987643211 111111123333 458888765 45
Q ss_pred ecCCCcEEEEECCCCeeeEEEeccCcc-ccccceeeEEECCCCCEEEEe-c------------CCeEEEEEccCCCCcee
Q 023672 144 TTRDHPIHLWDATTGLLRCTYRAYDAV-DEITAAFSVAFNPTGTKIFAG-Y------------NKSVRVFDVHRPGRDFE 209 (279)
Q Consensus 144 ~~~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~-~------------d~~i~~~d~~~~~~~~~ 209 (279)
+..++.|.+||+.+++....+...... .....+..++|+|+|++++++ . ++.|.+||+.++ +...
T Consensus 61 ~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~-~~~~ 139 (349)
T 1jmx_B 61 NNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADG-LEAK 139 (349)
T ss_dssp ETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGG-GGBC
T ss_pred eCCCCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCc-cccc
Confidence 567899999999999887777643210 001146789999999999865 4 499999999862 2222
Q ss_pred eeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG 263 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 263 (279)
..... .+...+.+++|+| ++. +++++ +.|++||+.+++.+..+..
T Consensus 140 ~~~~~-----~~~~~~~~~~~s~-dg~-l~~~~--~~i~~~d~~~~~~~~~~~~ 184 (349)
T 1jmx_B 140 PVRTF-----PMPRQVYLMRAAD-DGS-LYVAG--PDIYKMDVKTGKYTVALPL 184 (349)
T ss_dssp CSEEE-----ECCSSCCCEEECT-TSC-EEEES--SSEEEECTTTCCEEEEECS
T ss_pred eeeec-----cCCCcccceeECC-CCc-EEEcc--CcEEEEeCCCCceeccccc
Confidence 22222 2233588899999 777 44444 3499999999887776653
No 164
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.73 E-value=5e-17 Score=137.09 Aligned_cols=192 Identities=14% Similarity=0.102 Sum_probs=126.9
Q ss_pred eeEecCCCCcccceeeeeeccCCCC-CceEEEEEccCCCeEEEeeC---CCeEEEEeCCC--CccccccccccccCCCCc
Q 023672 36 LIRFDVPPHRTYHFYNQFRTSSIPN-NFLKGIKWSPDGSSFLTSSE---DKTLRIFSLPE--NGISYDVNACSLAKDQDS 109 (279)
Q Consensus 36 ~~~~d~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~t~~~---dg~i~iwd~~~--~~~~~~~~~~~~~~~~~~ 109 (279)
+.+|++..+... .+..|. ..|..++|+|| +.+++++. +....||.+.. ....
T Consensus 46 ~~lw~~~~g~~~-------~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~~~~~g~~-------------- 103 (582)
T 3o4h_A 46 VNAYLYDGGETV-------KLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVNTSRPGEE-------------- 103 (582)
T ss_dssp EEEEEEETTEEE-------ECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEETTSTTCC--------------
T ss_pred eeEEEEcCCCcE-------eeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEeccCCCcc--------------
Confidence 446665444332 344454 68999999999 77777765 45566766543 1110
Q ss_pred ccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE
Q 023672 110 YEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF 189 (279)
Q Consensus 110 ~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~ 189 (279)
........+...+|+| ++++..+++++.++ +.+||+.+++.......+ . .+++|+|||++|+
T Consensus 104 ----~~l~~~~~~~~~~~s~-----dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~~~~-------~-~~~~~spDG~~la 165 (582)
T 3o4h_A 104 ----QRLEAVKPMRILSGVD-----TGEAVVFTGATEDR-VALYALDGGGLRELARLP-------G-FGFVSDIRGDLIA 165 (582)
T ss_dssp ----EECTTSCSBEEEEEEE-----CSSCEEEEEECSSC-EEEEEEETTEEEEEEEES-------S-CEEEEEEETTEEE
T ss_pred ----ccccCCCCceeeeeCC-----CCCeEEEEecCCCC-ceEEEccCCcEEEeecCC-------C-ceEEECCCCCEEE
Confidence 0011111222334422 22333455555554 559999988765544322 2 6899999999999
Q ss_pred E-ecC----CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC--cEEEEecCCCeEEEEEe
Q 023672 190 A-GYN----KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIYREDNMELLYVLH 262 (279)
Q Consensus 190 ~-~~d----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg--~i~~wd~~~~~~~~~~~ 262 (279)
. +.+ +.|++||+.++. . ..+ ..|...+..++||| +|+.|+++..++ .|++||+.+++.. .+.
T Consensus 166 ~~~~~~~~~~~i~~~d~~~g~-~----~~l----~~~~~~~~~~~~Sp-DG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~ 234 (582)
T 3o4h_A 166 GLGFFGGGRVSLFTSNLSSGG-L----RVF----DSGEGSFSSASISP-GMKVTAGLETAREARLVTVDPRDGSVE-DLE 234 (582)
T ss_dssp EEEEEETTEEEEEEEETTTCC-C----EEE----CCSSCEEEEEEECT-TSCEEEEEECSSCEEEEEECTTTCCEE-ECC
T ss_pred EEEEcCCCCeEEEEEcCCCCC-c----eEe----ecCCCccccceECC-CCCEEEEccCCCeeEEEEEcCCCCcEE-Ecc
Confidence 4 455 679999998732 1 122 46677889999999 899999888888 8999999999887 777
Q ss_pred ecCCCEEEEE--------EccCCC
Q 023672 263 GQEGGVTHVS--------KLSSAY 278 (279)
Q Consensus 263 ~~~~~v~~~~--------~spdg~ 278 (279)
.|...+.+++ |+|||+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~spdg~ 258 (582)
T 3o4h_A 235 LPSKDFSSYRPTAITWLGYLPDGR 258 (582)
T ss_dssp CSCSHHHHHCCSEEEEEEECTTSC
T ss_pred CCCcChhhhhhccccceeEcCCCc
Confidence 7777777777 999984
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.71 E-value=1.4e-16 Score=138.03 Aligned_cols=209 Identities=11% Similarity=0.012 Sum_probs=131.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCC-----ceEEEEEccCCCeEEEeeCC---------CeEEEEeCCCCcccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNN-----FLKGIKWSPDGSSFLTSSED---------KTLRIFSLPENGISYDVNA 100 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~-----~v~~~~~~~~~~~l~t~~~d---------g~i~iwd~~~~~~~~~~~~ 100 (279)
.+.+||+.+++... .+.+|.. ....++|||||++|+.++.+ +.+.+||+.+++...
T Consensus 37 ~i~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~---- 106 (740)
T 4a5s_A 37 NILVFNAEYGNSSV------FLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT---- 106 (740)
T ss_dssp EEEEEETTTCCEEE------EECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC----
T ss_pred cEEEEECCCCceEE------EEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE----
Confidence 47789988887643 3444432 33458899999999988876 566799999875421
Q ss_pred ccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccc-----cc--
Q 023672 101 CSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD-----EI-- 173 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~-----~~-- 173 (279)
...+...+....| ||||+.||.+. ++.|++||+.+++...... ..... ..
T Consensus 107 --------------l~~~~~~~~~~~~-------SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~-~g~~~~~~~g~~~~ 163 (740)
T 4a5s_A 107 --------------EERIPNNTQWVTW-------SPVGHKLAYVW-NNDIYVKIEPNLPSYRITW-TGKEDIIYNGITDW 163 (740)
T ss_dssp --------------SSCCCTTEEEEEE-------CSSTTCEEEEE-TTEEEEESSTTSCCEECCS-CCBTTTEEESBCCH
T ss_pred --------------cccCCCcceeeEE-------CCCCCEEEEEE-CCeEEEEECCCCceEEEcC-CCCccceecCcccc
Confidence 1112345666666 88999999885 6899999999887543221 11100 00
Q ss_pred -------cceeeEEECCCCCEEEE-e-cCC-----------------------------------eEEEEEccC---CCC
Q 023672 174 -------TAAFSVAFNPTGTKIFA-G-YNK-----------------------------------SVRVFDVHR---PGR 206 (279)
Q Consensus 174 -------~~v~~~~~~~~~~~l~~-~-~d~-----------------------------------~i~~~d~~~---~~~ 206 (279)
.....+.|||||+.|+. . .++ .|++||+.+ +..
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~ 243 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTN 243 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSC
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCc
Confidence 11235899999998884 3 333 366666665 311
Q ss_pred -ceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC----CCcEEEEecCCCe----EE--EEE--eecCCCEE----
Q 023672 207 -DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY----SQTSAIYREDNME----LL--YVL--HGQEGGVT---- 269 (279)
Q Consensus 207 -~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~----dg~i~~wd~~~~~----~~--~~~--~~~~~~v~---- 269 (279)
....+ .......+|...+..++|+| ++.+++.... +..|++||+.+++ +. ..+ ..|...|.
T Consensus 244 ~~~~~l-~~~~~~~~~~~~~~~~~wsp-dg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~~~~~v~~~~~ 321 (740)
T 4a5s_A 244 ATSIQI-TAPASMLIGDHYLCDVTWAT-QERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMSTTGWVGRFRP 321 (740)
T ss_dssp CCEEEE-CCCHHHHTSCEEEEEEEEEE-TTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEECSSSCSSSSSC
T ss_pred ceEEEe-cCCccCCCCCeEEEEEEEeC-CCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeeccCCceEccCcC
Confidence 11111 00000013677899999999 7886665432 3369999999887 22 222 44665554
Q ss_pred -EEEEccCCC
Q 023672 270 -HVSKLSSAY 278 (279)
Q Consensus 270 -~~~~spdg~ 278 (279)
.++|+|||+
T Consensus 322 ~~p~fspDG~ 331 (740)
T 4a5s_A 322 SEPHFTLDGN 331 (740)
T ss_dssp CCCEECTTSS
T ss_pred CCceEcCCCC
Confidence 789999997
No 166
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.71 E-value=1.9e-15 Score=121.01 Aligned_cols=186 Identities=12% Similarity=0.072 Sum_probs=122.5
Q ss_pred ccCCCCCceEE-----EEEccCCCeEEEeeC-CCe--EEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEE
Q 023672 55 TSSIPNNFLKG-----IKWSPDGSSFLTSSE-DKT--LRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFC 126 (279)
Q Consensus 55 ~~~~h~~~v~~-----~~~~~~~~~l~t~~~-dg~--i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 126 (279)
.+..|...... .+|+|||++|+.++. +|. |.+||+.++.... +...+...+...
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~-----------------lt~~~~~~~~~~- 86 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQ-----------------LTEGRGDNTFGG- 86 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEE-----------------CCCSSCBCSSSC-
T ss_pred EecCCcccccchhhcCccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEE-----------------eeeCCCCCccce-
Confidence 45556655555 889999999998887 674 7888887654321 111122222233
Q ss_pred eeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceee--EEECCCCCEEEEe-------------
Q 023672 127 WFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFS--VAFNPTGTKIFAG------------- 191 (279)
Q Consensus 127 ~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~~~l~~~------------- 191 (279)
.++|+++.|+.++.++.|++||+.+++....+..+.. .+.. ..++|+++.+++.
T Consensus 87 ------~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~-----~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~ 155 (388)
T 3pe7_A 87 ------FLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAE-----WVGYGTWVANSDCTKLVGIEIRREDWVPLTDW 155 (388)
T ss_dssp ------EECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTT-----EEEEEEEEECTTSSEEEEEEEEGGGCCCCCSH
T ss_pred ------EEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhh-----cccccceeECCCCCeeccccccCccccccccc
Confidence 3488999999999999999999999987766655443 3322 3458999988731
Q ss_pred ----------cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC------CcEEEEecCCC
Q 023672 192 ----------YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS------QTSAIYREDNM 255 (279)
Q Consensus 192 ----------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d------g~i~~wd~~~~ 255 (279)
.+..|.+||+.++ .. . .+ ..+...+..++|+|.++..|+..+.+ ..|.++|...+
T Consensus 156 ~~~~~~~~~~~~~~l~~~d~~~g-~~-~---~l----~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 156 KKFHEFYFTKPCCRLMRVDLKTG-ES-T---VI----LQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp HHHHHHGGGCCCEEEEEEETTTC-CE-E---EE----EEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred chhhhhhccCCcceEEEEECCCC-ce-E---Ee----ecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 3467999999873 21 1 11 13345688999999445556555443 36788887665
Q ss_pred eEEEEEeecC--CCEEEEEEccCCCC
Q 023672 256 ELLYVLHGQE--GGVTHVSKLSSAYT 279 (279)
Q Consensus 256 ~~~~~~~~~~--~~v~~~~~spdg~~ 279 (279)
+.. .+..+. ..+..++|||||++
T Consensus 227 ~~~-~l~~~~~~~~~~~~~~spdg~~ 251 (388)
T 3pe7_A 227 NMR-KVKTHAEGESCTHEFWVPDGSA 251 (388)
T ss_dssp CCE-ESCCCCTTEEEEEEEECTTSSC
T ss_pred ceE-EeeeCCCCcccccceECCCCCE
Confidence 543 343343 25788999999974
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.69 E-value=1.2e-15 Score=122.09 Aligned_cols=201 Identities=10% Similarity=0.045 Sum_probs=126.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+++||+.++.... ...+|...+..++|+|||+.|+.++.++.|.+||+.+++... +
T Consensus 61 ~l~~~d~~~g~~~~------lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~-----------------~ 117 (388)
T 3pe7_A 61 NYYLLDLNTQVATQ------LTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENV-----------------V 117 (388)
T ss_dssp EEEEEETTTCEEEE------CCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEE-----------------E
T ss_pred eEEEEeCCCCceEE------eeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCccee-----------------e
Confidence 46677777766543 445566666678899999999999999999999998764321 1
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEE----------------------ecCCCcEEEEECCCCeeeEEEeccCcccc
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFAS----------------------TTRDHPIHLWDATTGLLRCTYRAYDAVDE 172 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s----------------------~~~d~~i~i~d~~~~~~~~~~~~~~~~~~ 172 (279)
...+...+....| .+++++..++. ...+..|.+||+.+++....... ..
T Consensus 118 ~~~~~~~~~~~~~-----~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~--- 188 (388)
T 3pe7_A 118 YQVPAEWVGYGTW-----VANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-NQ--- 188 (388)
T ss_dssp EECCTTEEEEEEE-----EECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-SS---
T ss_pred eechhhcccccce-----eECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-Cc---
Confidence 1122223333333 33678877763 23456899999999876544433 22
Q ss_pred ccceeeEEECC-CCCEEE-Eec------CCeEEEEEccCCCCceeeeeecccccCCCC--CceEEEEEccCCCcEEEEEe
Q 023672 173 ITAAFSVAFNP-TGTKIF-AGY------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQA--GIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 173 ~~~v~~~~~~~-~~~~l~-~~~------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~--~~v~~~~~sp~~~~~l~~~~ 242 (279)
.+..+.|+| +|+.|+ +.. ...|.++|+... . .. .+ ..+. ..+..++|+| +|..|+..+
T Consensus 189 --~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~-~-~~---~l----~~~~~~~~~~~~~~sp-dg~~l~~~~ 256 (388)
T 3pe7_A 189 --WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT-N-MR---KV----KTHAEGESCTHEFWVP-DGSALVYVS 256 (388)
T ss_dssp --CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC-C-CE---ES----CCCCTTEEEEEEEECT-TSSCEEEEE
T ss_pred --cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC-c-eE---Ee----eeCCCCcccccceECC-CCCEEEEEe
Confidence 678899999 998887 333 236777777642 1 11 22 1222 3577889999 777665433
Q ss_pred C-CC----cEEEEecCCCeEE--EEEeecCCC---EEEEEEccCCCC
Q 023672 243 Y-SQ----TSAIYREDNMELL--YVLHGQEGG---VTHVSKLSSAYT 279 (279)
Q Consensus 243 ~-dg----~i~~wd~~~~~~~--~~~~~~~~~---v~~~~~spdg~~ 279 (279)
. ++ .|++||+.+++.. ..+.++... ...++|+|||++
T Consensus 257 ~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~ 303 (388)
T 3pe7_A 257 YLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSD 303 (388)
T ss_dssp EETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECC
T ss_pred cCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCc
Confidence 2 22 3999999988743 333321100 112378999863
No 168
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.67 E-value=2.2e-13 Score=104.48 Aligned_cols=206 Identities=11% Similarity=0.161 Sum_probs=133.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEE-ccCCCeEEEeeC-CCeEEEEeCCCCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKW-SPDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~-~~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+.+||.. +.....+.......+|...+.++++ .++++++++... ++.|.+||.. +.....
T Consensus 52 ~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d~~-g~~~~~--------------- 114 (286)
T 1q7f_A 52 RIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYNQY-GQFVRK--------------- 114 (286)
T ss_dssp EEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEECTT-SCEEEE---------------
T ss_pred EEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEECCC-CcEEEE---------------
Confidence 46667765 3332222111112345567899999 467776666543 8899999943 322110
Q ss_pred eeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-
Q 023672 113 SLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG- 191 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~- 191 (279)
+.......+..+ +++++++++++...++.|.+||.. ++....+.... ....+.+++++|+++++++.
T Consensus 115 -~~~~~~~~~~~i-------~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~---~~~~p~~i~~~~~g~l~v~~~ 182 (286)
T 1q7f_A 115 -FGATILQHPRGV-------TVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSK---HLEFPNGVVVNDKQEIFISDN 182 (286)
T ss_dssp -ECTTTCSCEEEE-------EECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTT---TCSSEEEEEECSSSEEEEEEG
T ss_pred -ecCccCCCceEE-------EEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCC---ccCCcEEEEECCCCCEEEEEC
Confidence 111112234444 457889888887888999999964 55555554221 11257899999999877766
Q ss_pred cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC-cEEEEecCCCeEEEEEeecCC--CE
Q 023672 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-TSAIYREDNMELLYVLHGQEG--GV 268 (279)
Q Consensus 192 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg-~i~~wd~~~~~~~~~~~~~~~--~v 268 (279)
.++.|++||... . ....+.. .++...+..++++| ++.++++...++ .|.+||. +++.+..+..+.. .+
T Consensus 183 ~~~~i~~~~~~g--~---~~~~~~~--~g~~~~p~~i~~d~-~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~ 253 (286)
T 1q7f_A 183 RAHCVKVFNYEG--Q---YLRQIGG--EGITNYPIGVGINS-NGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQC 253 (286)
T ss_dssp GGTEEEEEETTC--C---EEEEESC--TTTSCSEEEEEECT-TCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCE
T ss_pred CCCEEEEEcCCC--C---EEEEEcc--CCccCCCcEEEECC-CCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcc
Confidence 789999999853 2 2222211 23335688999999 888888888776 9999995 6777777766543 47
Q ss_pred EEEEEccCCC
Q 023672 269 THVSKLSSAY 278 (279)
Q Consensus 269 ~~~~~spdg~ 278 (279)
.+++++|||+
T Consensus 254 ~~i~~~~~g~ 263 (286)
T 1q7f_A 254 FDVALMDDGS 263 (286)
T ss_dssp EEEEEETTTE
T ss_pred eeEEECCCCc
Confidence 8999999985
No 169
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.66 E-value=1.9e-13 Score=107.18 Aligned_cols=207 Identities=8% Similarity=0.035 Sum_probs=131.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCC----CeEEEEeCCCCccccccccccccCCCCcc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSED----KTLRIFSLPENGISYDVNACSLAKDQDSY 110 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 110 (279)
.+.+||..+++... ....+...+.+++++|+++++++...+ +.|.+||..++......
T Consensus 67 ~i~~~d~~~~~~~~------~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~------------ 128 (333)
T 2dg1_A 67 NIFKINPETKEIKR------PFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDII------------ 128 (333)
T ss_dssp EEEEECTTTCCEEE------EEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEE------------
T ss_pred EEEEEeCCCCcEEE------EeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEE------------
Confidence 35556665554432 112355779999999999988777666 68999998765431100
Q ss_pred cceeeecCCCceEEEEeeCcccccCCCCcEEEEecC------CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCC
Q 023672 111 EASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT 184 (279)
Q Consensus 111 ~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 184 (279)
........+..+.+ +|+++++++... .+.|..+|..+++....... .. .+..++|+|+
T Consensus 129 ---~~~~~~~~~~~i~~-------d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~-----~~~~i~~~~d 192 (333)
T 2dg1_A 129 ---EDLSTAYCIDDMVF-------DSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-IS-----VANGIALSTD 192 (333)
T ss_dssp ---CSSSSCCCEEEEEE-------CTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-ES-----SEEEEEECTT
T ss_pred ---ccCccCCcccceEE-------CCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-CC-----cccceEECCC
Confidence 00012234555554 778887776653 34566677665554332221 11 5678999999
Q ss_pred CCEEE-Ee-cCCeEEEEEccCCCCceeeee-ecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEE
Q 023672 185 GTKIF-AG-YNKSVRVFDVHRPGRDFEKYS-TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL 261 (279)
Q Consensus 185 ~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 261 (279)
++.++ +. .++.|.+||+.+.+....... .......++ ..+..+++++ ++.++++...++.|.+||. +++.+..+
T Consensus 193 g~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~-~G~l~v~~~~~~~v~~~d~-~g~~~~~~ 269 (333)
T 2dg1_A 193 EKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDS-DDNLYVAMYGQGRVLVFNK-RGYPIGQI 269 (333)
T ss_dssp SSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBT-TCCEEEEEETTTEEEEECT-TSCEEEEE
T ss_pred CCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECC-CCCEEEEEcCCCEEEEECC-CCCEEEEE
Confidence 98665 44 678999999975333222111 110011222 4678899999 8888888777889999998 57777777
Q ss_pred eecCC------CEEEEEEccCCC
Q 023672 262 HGQEG------GVTHVSKLSSAY 278 (279)
Q Consensus 262 ~~~~~------~v~~~~~spdg~ 278 (279)
..+.. .+.+++|+|||+
T Consensus 270 ~~~~~~~g~~~~~~~~~~~~dg~ 292 (333)
T 2dg1_A 270 LIPGRDEGHMLRSTHPQFIPGTN 292 (333)
T ss_dssp ECTTGGGTCSCBCCEEEECTTSC
T ss_pred EcCCCccccccCcceEEECCCCC
Confidence 65433 589999999974
No 170
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.66 E-value=1.8e-14 Score=123.40 Aligned_cols=173 Identities=13% Similarity=0.028 Sum_probs=115.6
Q ss_pred CCCceEEEEEccCCCeEEEeeCC----------CeEEEEeCCC------CccccccccccccCCCCcccceeeecCCCce
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSED----------KTLRIFSLPE------NGISYDVNACSLAKDQDSYEASLVVTEGESV 122 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~d----------g~i~iwd~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 122 (279)
|...+.+++|+|||+.|++++.| ..|.+||+.+ +.... +...+...+
T Consensus 128 ~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-----------------l~~~~~~~~ 190 (662)
T 3azo_A 128 GGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRE-----------------LSDDAHRFV 190 (662)
T ss_dssp TCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEE-----------------SSCSCSSEE
T ss_pred CCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeE-----------------EEecCCCcc
Confidence 67789999999999999988877 5899999986 32100 110112233
Q ss_pred EEEEeeCcccccCCCCcEEEEecCC--------CcEEEEECC-CC---eeeEEEeccCccccccceeeEEECCCCCEEEE
Q 023672 123 YDFCWFPHMSASDPTSCVFASTTRD--------HPIHLWDAT-TG---LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA 190 (279)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~l~s~~~d--------~~i~i~d~~-~~---~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 190 (279)
..+ +++|||+.|+.++.+ ..|.+||+. ++ +.......+.. .+..+.|+|+|+++++
T Consensus 191 ~~~-------~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~-----~~~~~~~spdg~l~~~ 258 (662)
T 3azo_A 191 TGP-------RLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE-----AIAQAEWAPDGSLIVA 258 (662)
T ss_dssp CCC-------EECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB-----CEEEEEECTTSCEEEE
T ss_pred cCc-------eECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc-----eEcceEECCCCeEEEE
Confidence 344 458999999887754 379999998 56 43333333233 6789999999996666
Q ss_pred e-cCC--eEEEEEccCCCCceeeeeecccccCCCCC--------ceEEEEEccCCCcEEEEEeCCCcEEEE--ecCCCeE
Q 023672 191 G-YNK--SVRVFDVHRPGRDFEKYSTLKGNKEGQAG--------IMSAIAFSPTHTGMLAIGSYSQTSAIY--REDNMEL 257 (279)
Q Consensus 191 ~-~d~--~i~~~d~~~~~~~~~~~~~~~~~~~~~~~--------~v~~~~~sp~~~~~l~~~~~dg~i~~w--d~~~~~~ 257 (279)
+ .++ .|.+||+.++ . ... +. ..+.. .+.+++|+| ++.++++++. +.++|| |+.+++
T Consensus 259 ~~~~~~~~l~~~~~~~~-~-~~~---l~---~~~~~~~~p~w~~~~~~~~~~~-~~~~~~~~~~-~~~~l~~~d~~~~~- 327 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATG-A-ATQ---LC---RREEEFAGPLWTPGMRWFAPLA-NGLIAVVHGK-GAAVLGILDPESGE- 327 (662)
T ss_dssp ECTTSSCEEEEECTTTC-C-EEE---SS---CCSSBSSCCCCSTTCCSEEECT-TSCEEEEEBS-SSCEEEEEETTTTE-
T ss_pred ECCCCCeEEEEEECCCC-c-eee---cc---cccccccCccccccCceEeEeC-CCEEEEEEEc-CccEEEEEECCCCc-
Confidence 6 677 5666666442 1 111 11 11111 156789999 8899999998 999999 555555
Q ss_pred EEEEeecCCCEEEE
Q 023672 258 LYVLHGQEGGVTHV 271 (279)
Q Consensus 258 ~~~~~~~~~~v~~~ 271 (279)
+..+..+...+..+
T Consensus 328 ~~~l~~~~~~~~~~ 341 (662)
T 3azo_A 328 LVDAAGPWTEWAAT 341 (662)
T ss_dssp EEECCSSCCEEEEE
T ss_pred EEEecCCCCeEEEE
Confidence 56777777777766
No 171
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.65 E-value=2.4e-13 Score=106.46 Aligned_cols=215 Identities=13% Similarity=0.102 Sum_probs=138.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCc-cccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENG-ISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+++||..+++.... ...++-....+++++|+|+++++...++.|++||..... .......... ..
T Consensus 70 ~i~~~d~~~g~~~~~-----~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~-~g------- 136 (329)
T 3fvz_A 70 TILVIDPNNAEILQS-----SGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ-PG------- 136 (329)
T ss_dssp CEEEECTTTCCEEEE-----ECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB-CC-------
T ss_pred cEEEEECCCCeEEec-----cCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC-CC-------
Confidence 367788877776432 122455678999999999988888889999999986431 1100000000 00
Q ss_pred eeecCCCceEEEEeeCcccccCC-CCcEEEEec-CCCcEEEEECCCCeeeEEEeccCcc-----ccccceeeEEECCC-C
Q 023672 114 LVVTEGESVYDFCWFPHMSASDP-TSCVFASTT-RDHPIHLWDATTGLLRCTYRAYDAV-----DEITAAFSVAFNPT-G 185 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~s~~-~d~~i~i~d~~~~~~~~~~~~~~~~-----~~~~~v~~~~~~~~-~ 185 (279)
....+-..... ++++| ++.++++.+ .++.|++|+ .+++.+..+...... .....+..++++|+ +
T Consensus 137 ~~~~~~~~P~~-------ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g 208 (329)
T 3fvz_A 137 SDQNHFCQPTD-------VAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLD 208 (329)
T ss_dssp CSTTCCSSEEE-------EEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTT
T ss_pred CCccccCCCcE-------EEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCC
Confidence 00011112333 45688 787777776 689999999 567776666433221 12224789999998 5
Q ss_pred CEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEE-------eCCCcEEEEecCCCeE
Q 023672 186 TKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG-------SYSQTSAIYREDNMEL 257 (279)
Q Consensus 186 ~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~-------~~dg~i~~wd~~~~~~ 257 (279)
.++++. .++.|++||..++ +.. ..+.. ..+...+.+++++| +..+++. ..+..|++||..+++.
T Consensus 209 ~l~v~d~~~~~I~~~~~~~G-~~~---~~~~~--~~~~~~~~~~~~~p--g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~ 280 (329)
T 3fvz_A 209 QLCVADRENGRIQCFKTDTK-EFV---REIKH--ASFGRNVFAISYIP--GFLFAVNGKPYFGDQEPVQGFVMNFSSGEI 280 (329)
T ss_dssp EEEEEETTTTEEEEEETTTC-CEE---EEECC--TTTTTCEEEEEEET--TEEEEEECCCCTTCSCCCCEEEEETTTCCE
T ss_pred EEEEEECCCCEEEEEECCCC-cEE---EEEec--cccCCCcceeeecC--CEEEEeCCCEEeccCCCcEEEEEEcCCCeE
Confidence 655565 8899999999853 222 22211 24456788899998 3333333 2345899999999999
Q ss_pred EEEEe---ecCCCEEEEEEccCCC
Q 023672 258 LYVLH---GQEGGVTHVSKLSSAY 278 (279)
Q Consensus 258 ~~~~~---~~~~~v~~~~~spdg~ 278 (279)
+..+. .+...+.+++++|||+
T Consensus 281 ~~~~~~~~~~~~~p~~ia~~~dG~ 304 (329)
T 3fvz_A 281 IDVFKPVRKHFDMPHDIVASEDGT 304 (329)
T ss_dssp EEEECCSSSCCSSEEEEEECTTSE
T ss_pred EEEEcCCCCccCCeeEEEECCCCC
Confidence 98884 5666799999999984
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=3.9e-13 Score=103.60 Aligned_cols=200 Identities=11% Similarity=0.051 Sum_probs=128.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+..|+..++ . . .+..+...+.+++++|+|+++++...++.|.+||..++..... .
T Consensus 51 ~i~~~~~~~~-~-~------~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~~~----------------~ 106 (296)
T 3e5z_A 51 RTWAWSDDGQ-L-S------PEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWESI----------------A 106 (296)
T ss_dssp EEEEEETTSC-E-E------EEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEEEE----------------E
T ss_pred EEEEEECCCC-e-E------EEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEEEE----------------e
Confidence 3455665554 2 1 2334567799999999999887777778999999976543110 0
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEE----ec-------------CCCcEEEEECCCCeeeEEEeccCcccccccee
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFAS----TT-------------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAF 177 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s----~~-------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~ 177 (279)
....... .-.|..++++|+|+++++ ++ ..+.|..++.. ++.. .+..... .+.
T Consensus 107 ~~~~~~~----~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~~-----~~~ 175 (296)
T 3e5z_A 107 DSFEGKK----LNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIRDRV-----KPN 175 (296)
T ss_dssp CEETTEE----CCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEECCCS-----SEE
T ss_pred eccCCCC----CCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-EeecCCC-----CCc
Confidence 0000000 012333456889988887 33 13456666654 4433 2322222 567
Q ss_pred eEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCe
Q 023672 178 SVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (279)
Q Consensus 178 ~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~ 256 (279)
.++|+|+++.+++. .++.|.+||+...+........+ ..+...+..+++++ +|.++++. ++.|.+||.. ++
T Consensus 176 gi~~s~dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~----~~~~~~p~~i~~d~-~G~l~v~~--~~~v~~~~~~-g~ 247 (296)
T 3e5z_A 176 GLAFLPSGNLLVSDTGDNATHRYCLNARGETEYQGVHF----TVEPGKTDGLRVDA-GGLIWASA--GDGVHVLTPD-GD 247 (296)
T ss_dssp EEEECTTSCEEEEETTTTEEEEEEECSSSCEEEEEEEE----CCSSSCCCSEEEBT-TSCEEEEE--TTEEEEECTT-SC
T ss_pred cEEECCCCCEEEEeCCCCeEEEEEECCCCcCcCCCeEe----eCCCCCCCeEEECC-CCCEEEEc--CCeEEEECCC-CC
Confidence 89999999988655 77899999997322220111122 12345567899999 88777666 7889999986 78
Q ss_pred EEEEEeecCCCEEEEEE-ccCCC
Q 023672 257 LLYVLHGQEGGVTHVSK-LSSAY 278 (279)
Q Consensus 257 ~~~~~~~~~~~v~~~~~-spdg~ 278 (279)
.+..+..+.. +.+++| +|||+
T Consensus 248 ~~~~~~~~~~-~~~~~f~~~d~~ 269 (296)
T 3e5z_A 248 ELGRVLTPQT-TSNLCFGGPEGR 269 (296)
T ss_dssp EEEEEECSSC-CCEEEEESTTSC
T ss_pred EEEEEECCCC-ceeEEEECCCCC
Confidence 8888887777 899999 58875
No 173
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.62 E-value=3.2e-13 Score=104.12 Aligned_cols=186 Identities=12% Similarity=0.141 Sum_probs=124.2
Q ss_pred ccCCCCCceEEEEEccCCC-eEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 55 TSSIPNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
.+..+.....+++|+|+++ +++++..++.|..|+..++ .. ........+..+.+
T Consensus 22 ~l~~~~~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~-~~------------------~~~~~~~~~~~l~~------ 76 (296)
T 3e5z_A 22 RLADGFTWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQ-LS------------------PEMHPSHHQNGHCL------ 76 (296)
T ss_dssp EEECCCSSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSC-EE------------------EEESSCSSEEEEEE------
T ss_pred EEecCCccccCCeEeCCCCEEEEEeCCCCEEEEEECCCC-eE------------------EEECCCCCcceeeE------
Confidence 3334556688999999998 7778888999999998864 11 11122334555544
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE----ec--------------CCe
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA----GY--------------NKS 195 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~--------------d~~ 195 (279)
+++++++++...++.|.+||..+++.......... .....+..++++|+|+++++ |. .+.
T Consensus 77 -~~dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~-~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~ 154 (296)
T 3e5z_A 77 -NKQGHLIACSHGLRRLERQREPGGEWESIADSFEG-KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRW 154 (296)
T ss_dssp -CTTCCEEEEETTTTEEEEECSTTCCEEEEECEETT-EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCE
T ss_pred -CCCCcEEEEecCCCeEEEEcCCCCcEEEEeeccCC-CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcE
Confidence 88898888877778999999988875444332211 11124678999999998885 31 234
Q ss_pred EEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC-CCeE---EEEEeecCCCEEEE
Q 023672 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-NMEL---LYVLHGQEGGVTHV 271 (279)
Q Consensus 196 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~-~~~~---~~~~~~~~~~v~~~ 271 (279)
|..++.. +. .. .+ ..+...+..++|+| ++..|++.+.++.|++||+. ++.. ...+..+...+.++
T Consensus 155 l~~~~~~--g~-~~---~~----~~~~~~~~gi~~s~-dg~~lv~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i 223 (296)
T 3e5z_A 155 VFRLAPD--GT-LS---AP----IRDRVKPNGLAFLP-SGNLLVSDTGDNATHRYCLNARGETEYQGVHFTVEPGKTDGL 223 (296)
T ss_dssp EEEECTT--SC-EE---EE----ECCCSSEEEEEECT-TSCEEEEETTTTEEEEEEECSSSCEEEEEEEECCSSSCCCSE
T ss_pred EEEECCC--CC-EE---Ee----ecCCCCCccEEECC-CCCEEEEeCCCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeE
Confidence 5555443 11 11 11 23345578999999 78777888888999999997 5554 23333345567789
Q ss_pred EEccCCC
Q 023672 272 SKLSSAY 278 (279)
Q Consensus 272 ~~spdg~ 278 (279)
+++++|+
T Consensus 224 ~~d~~G~ 230 (296)
T 3e5z_A 224 RVDAGGL 230 (296)
T ss_dssp EEBTTSC
T ss_pred EECCCCC
Confidence 9999886
No 174
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.61 E-value=3.8e-14 Score=121.30 Aligned_cols=193 Identities=11% Similarity=0.079 Sum_probs=119.6
Q ss_pred ccCCCCCceE---------EEEEc--cCCCe-EEEeeC-CCeEEEEeCC--C-CccccccccccccCCCCcccceeeecC
Q 023672 55 TSSIPNNFLK---------GIKWS--PDGSS-FLTSSE-DKTLRIFSLP--E-NGISYDVNACSLAKDQDSYEASLVVTE 118 (279)
Q Consensus 55 ~~~~h~~~v~---------~~~~~--~~~~~-l~t~~~-dg~i~iwd~~--~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 118 (279)
.+..|...+. ...|+ |||++ |+.++. +..|.++++. + +... ..... ....+
T Consensus 62 ~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~~~~~~~~g~~~~~-~l~~~------------~~~~~ 128 (662)
T 3azo_A 62 SALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLYAFEPDAPGGAVPR-PLTPV------------SAVGG 128 (662)
T ss_dssp ESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEEEECTTSTTCCCCE-ECSCC------------CCSTT
T ss_pred eeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEEEEcCCCCCCCCCE-eccCC------------ccCCC
Confidence 4555655555 56665 99998 776554 5566666665 2 2210 00000 00002
Q ss_pred CCceEEEEeeCcccccCCCCcEEEEecCC----------CcEEEEECCC------CeeeEEEe-ccCccccccceeeEEE
Q 023672 119 GESVYDFCWFPHMSASDPTSCVFASTTRD----------HPIHLWDATT------GLLRCTYR-AYDAVDEITAAFSVAF 181 (279)
Q Consensus 119 ~~~v~~~~~~~~~~~~~~~~~~l~s~~~d----------~~i~i~d~~~------~~~~~~~~-~~~~~~~~~~v~~~~~ 181 (279)
...+..++| +|||+.|++++.+ ..|.+||+.+ ++.. .+. .+.. .+..++|
T Consensus 129 ~~~~~~~~~-------spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~~-----~~~~~~~ 195 (662)
T 3azo_A 129 GLRWADPVL-------LPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAHR-----FVTGPRL 195 (662)
T ss_dssp CEEEEEEEE-------ETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCSS-----EECCCEE
T ss_pred CccccCcEE-------CCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCCC-----cccCceE
Confidence 335566666 7899999988876 5899999988 5543 333 2222 6778999
Q ss_pred CCCCCEEE-EecC--------CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC--cEEEE
Q 023672 182 NPTGTKIF-AGYN--------KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--TSAIY 250 (279)
Q Consensus 182 ~~~~~~l~-~~~d--------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg--~i~~w 250 (279)
+|||+.|+ ++.+ ..|++||+...+.. .....+. .++...+..+.|+| ++.++++++.++ .|++|
T Consensus 196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~-~~~~~l~---~~~~~~~~~~~~sp-dg~l~~~~~~~~~~~l~~~ 270 (662)
T 3azo_A 196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRF-ADTRTLL---GGPEEAIAQAEWAP-DGSLIVATDRTGWWNLHRV 270 (662)
T ss_dssp CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCE-EEEEEEE---EETTBCEEEEEECT-TSCEEEEECTTSSCEEEEE
T ss_pred CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcc-cccEEeC---CCCCceEcceEECC-CCeEEEEECCCCCeEEEEE
Confidence 99999998 4433 37999999832211 1111221 24456789999999 777888888888 56677
Q ss_pred ecCCCeEEEEEeecCCC--------EEEEEEccCCC
Q 023672 251 REDNMELLYVLHGQEGG--------VTHVSKLSSAY 278 (279)
Q Consensus 251 d~~~~~~~~~~~~~~~~--------v~~~~~spdg~ 278 (279)
|+.+++.......+... +..++|+|+|+
T Consensus 271 ~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~ 306 (662)
T 3azo_A 271 DPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGL 306 (662)
T ss_dssp CTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSC
T ss_pred ECCCCceeecccccccccCccccccCceEeEeCCCE
Confidence 77677654433333221 56788888875
No 175
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.60 E-value=1.1e-12 Score=100.01 Aligned_cols=200 Identities=9% Similarity=0.029 Sum_probs=139.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCC-CceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPN-NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~-~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.+||..+++.+.. +..+. ..+.+++++|+|++|+ +.++.|..||. +++.....
T Consensus 16 ~v~~~d~~tG~~~w~------~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~--------------- 71 (276)
T 3no2_A 16 KIAIINKDTKEIVWE------YPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNI--------------- 71 (276)
T ss_dssp EEEEEETTTTEEEEE------EECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEE---------------
T ss_pred EEEEEECCCCeEEEE------eCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEE---------------
Confidence 577899988888763 22333 4688999999999888 34778999998 55443221
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecC-CCcEEEEECCCCeeeEEEeccCcc-ccccceeeEEECCCCCEEEEe
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAV-DEITAAFSVAFNPTGTKIFAG 191 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~-d~~i~i~d~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~ 191 (279)
.......+.++. +.++|+++++.+. ++.|..+|. +++.+..+...... .....+..+.+.++|+++++.
T Consensus 72 -~~~~~~~~~~~~-------~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~ 142 (276)
T 3no2_A 72 -AAPAGCEMQTAR-------ILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPL 142 (276)
T ss_dssp -ECCTTCEEEEEE-------ECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEE
T ss_pred -cCCCCccccccE-------ECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEe
Confidence 111122344444 3789999998877 777888885 68877777643221 111245567889999999877
Q ss_pred -cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC-----
Q 023672 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE----- 265 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~----- 265 (279)
.++.|..||.. + + .+..+.. ...+.++...+ ++.++++++.++.|..+|..+|+.+.++..+.
T Consensus 143 ~~~~~v~~~d~~-G-~---~~w~~~~-----~~~~~~~~~~~-~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~ 211 (276)
T 3no2_A 143 FATSEVREIAPN-G-Q---LLNSVKL-----SGTPFSSAFLD-NGDCLVACGDAHCFVQLNLESNRIVRRVNANDIEGVQ 211 (276)
T ss_dssp TTTTEEEEECTT-S-C---EEEEEEC-----SSCCCEEEECT-TSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSBSCC
T ss_pred cCCCEEEEECCC-C-C---EEEEEEC-----CCCccceeEcC-CCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCCCcc
Confidence 89999999987 4 2 2233321 13455678888 88999998888899999999999998887442
Q ss_pred -CCEEEEEEccCCC
Q 023672 266 -GGVTHVSKLSSAY 278 (279)
Q Consensus 266 -~~v~~~~~spdg~ 278 (279)
..+.+++..++|.
T Consensus 212 l~~~~~~~~~~~G~ 225 (276)
T 3no2_A 212 LFFVAQLFPLQNGG 225 (276)
T ss_dssp CSEEEEEEECTTSC
T ss_pred ccccccceEcCCCC
Confidence 1267777777775
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.60 E-value=4.5e-13 Score=102.70 Aligned_cols=191 Identities=9% Similarity=0.120 Sum_probs=128.0
Q ss_pred cCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccC
Q 023672 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (279)
Q Consensus 56 ~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (279)
..++-....+++++++++++++...++.|.+||.... ......... ....+...+..+++. .
T Consensus 25 ~~g~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~g~-~~~~~~~~~-----------~~~~~~~~p~~i~~~------~ 86 (286)
T 1q7f_A 25 MEGQFTEPSGVAVNAQNDIIVADTNNHRIQIFDKEGR-FKFQFGECG-----------KRDSQLLYPNRVAVV------R 86 (286)
T ss_dssp STTCBSCEEEEEECTTCCEEEEEGGGTEEEEECTTSC-EEEEECCBS-----------SSTTCBSSEEEEEEE------T
T ss_pred CCCccCCCceEEECCCCCEEEEECCCCEEEEECCCCc-EEEEecccC-----------CCcccccCceEEEEE------c
Confidence 4456677999999999998888888999999998732 211100000 000011233444331 4
Q ss_pred CCCcEEEEecC-CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeee
Q 023672 136 PTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST 213 (279)
Q Consensus 136 ~~~~~l~s~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~ 213 (279)
+++.++++... ++.|.+|| .+++.+..+..... ..+.+++++|+++++++. .++.|.+||... .... .
T Consensus 87 ~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~----~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g--~~~~---~ 156 (286)
T 1q7f_A 87 NSGDIIVTERSPTHQIQIYN-QYGQFVRKFGATIL----QHPRGVTVDNKGRIIVVECKVMRVIIFDQNG--NVLH---K 156 (286)
T ss_dssp TTTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTC----SCEEEEEECTTSCEEEEETTTTEEEEECTTS--CEEE---E
T ss_pred CCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccC----CCceEEEEeCCCCEEEEECCCCEEEEEcCCC--CEEE---E
Confidence 56766666543 78999999 56776666543221 257899999999877776 788999999653 2222 2
Q ss_pred cccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec--CCCEEEEEEccCCC
Q 023672 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ--EGGVTHVSKLSSAY 278 (279)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~--~~~v~~~~~spdg~ 278 (279)
+.. ..+...+..++++| ++.++++...++.|++||. +++.+..+..+ ...+.+++++|+|+
T Consensus 157 ~~~--~~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~g~~~~p~~i~~d~~G~ 219 (286)
T 1q7f_A 157 FGC--SKHLEFPNGVVVND-KQEIFISDNRAHCVKVFNY-EGQYLRQIGGEGITNYPIGVGINSNGE 219 (286)
T ss_dssp EEC--TTTCSSEEEEEECS-SSEEEEEEGGGTEEEEEET-TCCEEEEESCTTTSCSEEEEEECTTCC
T ss_pred eCC--CCccCCcEEEEECC-CCCEEEEECCCCEEEEEcC-CCCEEEEEccCCccCCCcEEEECCCCC
Confidence 210 13345688999999 8888888888999999997 56666666543 35789999999985
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.60 E-value=9.3e-13 Score=103.11 Aligned_cols=190 Identities=13% Similarity=0.147 Sum_probs=126.8
Q ss_pred CceEEEEEccCCCeEEEeeCC------------------------CeEEEEeCCCCccccccccccccCCCCcccceeee
Q 023672 61 NFLKGIKWSPDGSSFLTSSED------------------------KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVV 116 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~d------------------------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (279)
+.+.+++++|+|+++++.+.+ ++|.+||..++..... ...
T Consensus 24 ~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~----------------~~~ 87 (329)
T 3fvz_A 24 GQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQS----------------SGK 87 (329)
T ss_dssp SCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEE----------------ECT
T ss_pred CCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEec----------------cCC
Confidence 569999999999988888777 3677777765543110 000
Q ss_pred cCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCe-eeEEEeccCc----cccccceeeEEECC-CCCEEEE
Q 023672 117 TEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDA----VDEITAAFSVAFNP-TGTKIFA 190 (279)
Q Consensus 117 ~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~-~~~~~~~~~~----~~~~~~v~~~~~~~-~~~~l~~ 190 (279)
..-.. |..++++++++++++...++.|++||..... .+..+..... ......+..++++| ++.++++
T Consensus 88 ~~~~~-------p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~ 160 (329)
T 3fvz_A 88 NLFYL-------PHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVS 160 (329)
T ss_dssp TTCSS-------EEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEE
T ss_pred CccCC-------ceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEE
Confidence 11112 3334568899988888889999999986542 4444432111 11222578999999 7877776
Q ss_pred e--cCCeEEEEEccCCCCceeeeeecccc---cCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee--
Q 023672 191 G--YNKSVRVFDVHRPGRDFEKYSTLKGN---KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG-- 263 (279)
Q Consensus 191 ~--~d~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-- 263 (279)
. .++.|++||.. +.....+...... ..++-..+..++++|+++.++++...++.|++||..+++.+..+..
T Consensus 161 d~~~~~~I~~~~~~--g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~ 238 (329)
T 3fvz_A 161 DGYCNSRIVQFSPS--GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHAS 238 (329)
T ss_dssp ECSSCCEEEEECTT--SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTT
T ss_pred eCCCCCeEEEEcCC--CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccc
Confidence 5 48999999954 2222221111000 0122345889999993388888888999999999998998888853
Q ss_pred cCCCEEEEEEcc
Q 023672 264 QEGGVTHVSKLS 275 (279)
Q Consensus 264 ~~~~v~~~~~sp 275 (279)
+...+.+++|+|
T Consensus 239 ~~~~~~~~~~~p 250 (329)
T 3fvz_A 239 FGRNVFAISYIP 250 (329)
T ss_dssp TTTCEEEEEEET
T ss_pred cCCCcceeeecC
Confidence 456788999998
No 178
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.59 E-value=5e-14 Score=111.29 Aligned_cols=178 Identities=12% Similarity=0.061 Sum_probs=124.1
Q ss_pred ceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEE
Q 023672 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (279)
Q Consensus 62 ~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (279)
.++.+++++...++++|+.++ +.+|++.......... .............. |+.++| ++.+|
T Consensus 39 ~~nlLais~~~gll~a~~~~~-l~v~~~~~l~~~~~~~-------~~~~~~~~~~~lp~-V~~l~f---------d~~~L 100 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASGSK-AVVGELQLLRDHITSD-------STPLTFKWEKEIPD-VIFVCF---------HGDQV 100 (388)
T ss_dssp CCBCEEEETTTTEEEEEETTE-EEEEEHHHHHHHHHSS-------SCCCCCSEEEECTT-EEEEEE---------ETTEE
T ss_pred cccEEEEcCCCCEEEEeCCCE-EEEEEhhHhhhhhccc-------cccccceEEeeCCC-eeEEEE---------CCCEE
Confidence 689999999999999999885 5669976432100000 00011112223334 777765 67889
Q ss_pred EEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccccCCC
Q 023672 142 ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQ 221 (279)
Q Consensus 142 ~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~ 221 (279)
+++ .++.|++||+++.........+.. .+.++.+.+.. ++++..||.+.+||+..+. . . . +
T Consensus 101 ~v~-~~~~l~v~dv~sl~~~~~~~~~~~-----~v~~i~~~~p~-~av~~~dG~L~v~dl~~~~-~-~---~-------~ 161 (388)
T 1xip_A 101 LVS-TRNALYSLDLEELSEFRTVTSFEK-----PVFQLKNVNNT-LVILNSVNDLSALDLRTKS-T-K---Q-------L 161 (388)
T ss_dssp EEE-ESSEEEEEESSSTTCEEEEEECSS-----CEEEEEECSSE-EEEEETTSEEEEEETTTCC-E-E---E-------E
T ss_pred EEE-cCCcEEEEEchhhhccCccceeec-----ceeeEEecCCC-EEEEECCCCEEEEEccCCc-c-c---c-------c
Confidence 888 789999999987765555555544 56777776553 3335599999999998632 1 1 1 2
Q ss_pred CCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeE--EEEE------e---ecCCCEEEEEEccCCCC
Q 023672 222 AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL--LYVL------H---GQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 222 ~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~--~~~~------~---~~~~~v~~~~~spdg~~ 279 (279)
...|++++||| .| ++.|..||++++|+...++. ..++ . +|...|.++.|.++++|
T Consensus 162 ~~~Vs~v~WSp-kG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~f 227 (388)
T 1xip_A 162 AQNVTSFDVTN-SQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDF 227 (388)
T ss_dssp EESEEEEEECS-SE--EEEEETTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEE
T ss_pred cCCceEEEEcC-Cc--eEEEEcCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeE
Confidence 34699999999 77 67889999999999888775 5666 2 36778999999998764
No 179
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.58 E-value=2.1e-12 Score=107.79 Aligned_cols=208 Identities=10% Similarity=0.046 Sum_probs=132.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCC--CCccccccccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLP--ENGISYDVNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~--~~~~~~~~~~~~~~~~~~~~~~ 112 (279)
.+.++|..+++.+.. +. ....+..+.|+|||+++++++.|+.|.+||+. +++...
T Consensus 178 ~V~viD~~t~~v~~~------i~-~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~---------------- 234 (567)
T 1qks_A 178 QIALIDGSTYEIKTV------LD-TGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVA---------------- 234 (567)
T ss_dssp EEEEEETTTCCEEEE------EE-CSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEE----------------
T ss_pred eEEEEECCCCeEEEE------Ee-CCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeE----------------
Confidence 456677777766542 22 12346789999999999999999999999995 432211
Q ss_pred eeeecCCCceEEEEeeCcccccC----CCCcEEEEecC-CCcEEEEECCCCeeeEEEeccCcc--------c--------
Q 023672 113 SLVVTEGESVYDFCWFPHMSASD----PTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAV--------D-------- 171 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~----~~~~~l~s~~~-d~~i~i~d~~~~~~~~~~~~~~~~--------~-------- 171 (279)
....+.. |..++++ |+|+++++++. ++.|.++|..+.+.+..+...... .
T Consensus 235 --~i~~G~~-------P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 235 --EIKIGSE-------ARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp --EEECCSE-------EEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred --EEecCCC-------CceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 1111222 2334557 58888777654 578899998888777665532100 0
Q ss_pred ----------------------------------cccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeecc
Q 023672 172 ----------------------------------EITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 172 ----------------------------------~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.......+.|+|++++++ +. .++.|.++|+.++ + ....+.
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~-k---l~~~i~ 381 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEG-K---LVAIED 381 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTT-E---EEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCC-c---EEEEEe
Confidence 001233568999999887 44 7899999999984 2 222222
Q ss_pred c-ccCCCCCceEEEEEccCCCcEEEEEe-CCCcEEEEecCC-------CeEEEEEeecCCCEEEEEEccCCCC
Q 023672 216 G-NKEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDN-------MELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 216 ~-~~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~~wd~~~-------~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
. ....|.+.-..+ ++|+.+.+++++. .++.|.++|..+ .+.+.++......-..+..+|||++
T Consensus 382 vgg~~Phpg~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~~~~~~~~~kvv~~i~~~g~g~~~i~~~p~~~~ 453 (567)
T 1qks_A 382 TGGQTPHPGRGANF-VHPTFGPVWATSHMGDDSVALIGTDPEGHPDNAWKILDSFPALGGGSLFIKTHPNSQY 453 (567)
T ss_dssp CSSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCSE
T ss_pred ccCcCCCCccceee-ECCCCCcEEEeCCCCCCeEEEecCCCCCCccccCEEEEEEecCCCCCEEEEeCCCCCe
Confidence 2 123444322222 5783366666654 468999999987 6788888865444355778999874
No 180
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.57 E-value=6.8e-13 Score=114.47 Aligned_cols=184 Identities=11% Similarity=0.013 Sum_probs=116.8
Q ss_pred CCCCceEEEEEccCCCeEEEeeCCC-----eEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccc
Q 023672 58 IPNNFLKGIKWSPDGSSFLTSSEDK-----TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~t~~~dg-----~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (279)
+|...+..++|||||++||.++.++ .|++||+.+++.... .... ..+..+.|
T Consensus 122 ~~~~~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-----------------~~~~-~~~~~~~w----- 178 (710)
T 2xdw_A 122 DGTVALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPD-----------------VLER-VKFSCMAW----- 178 (710)
T ss_dssp TSCEEEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEE-----------------EEEE-ECSCCEEE-----
T ss_pred CCCEEEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcc-----------------cccC-cccceEEE-----
Confidence 4555789999999999998665533 899999997654211 0101 11334444
Q ss_pred ccCCCCcEEEEecCCCc----------------EEEEECCCCeee--EEEeccCccccccceeeEEECCCCCEEEE-ec-
Q 023672 133 ASDPTSCVFASTTRDHP----------------IHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPTGTKIFA-GY- 192 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d~~----------------i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~- 192 (279)
+|||+.|+.++.++. |++|++.+++.. ..+..... ...+..+.|+|+|++|+. +.
T Consensus 179 --spDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~---~~~~~~~~~SpDg~~l~~~~~~ 253 (710)
T 2xdw_A 179 --THDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDE---PKWMGGAELSDDGRYVLLSIRE 253 (710)
T ss_dssp --CTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTC---TTCEEEEEECTTSCEEEEEEEC
T ss_pred --EeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCC---CeEEEEEEEcCCCCEEEEEEEc
Confidence 889999998887765 999999887632 22222111 114678999999998883 33
Q ss_pred ----CCeEEEEEccC------CCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC-C---CcEEEEecCCCeE-
Q 023672 193 ----NKSVRVFDVHR------PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-S---QTSAIYREDNMEL- 257 (279)
Q Consensus 193 ----d~~i~~~d~~~------~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~-d---g~i~~wd~~~~~~- 257 (279)
+..|++||+.+ +...... + ..+...+.. .|+| ++..|+..+. + +.|.+||+.++..
T Consensus 254 ~~~~~~~l~~~d~~~~~~~~~~~~~~~~---l----~~~~~~~~~-~~s~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~ 324 (710)
T 2xdw_A 254 GCDPVNRLWYCDLQQESNGITGILKWVK---L----IDNFEGEYD-YVTN-EGTVFTFKTNRHSPNYRLINIDFTDPEES 324 (710)
T ss_dssp SSSSCCEEEEEEGGGSSSSSCSSCCCEE---E----ECSSSSCEE-EEEE-ETTEEEEEECTTCTTCEEEEEETTSCCGG
T ss_pred cCCCccEEEEEECcccccccCCccceEE---e----eCCCCcEEE-EEec-cCCEEEEEECCCCCCCEEEEEeCCCCCcc
Confidence 57899999975 2212222 2 223333443 5888 5555554443 2 3699999987742
Q ss_pred -EEEEeecCC--CEEEEEEccCCC
Q 023672 258 -LYVLHGQEG--GVTHVSKLSSAY 278 (279)
Q Consensus 258 -~~~~~~~~~--~v~~~~~spdg~ 278 (279)
...+..|.. .+.+++|+++++
T Consensus 325 ~~~~l~~~~~~~~~~~~~~~~~~~ 348 (710)
T 2xdw_A 325 KWKVLVPEHEKDVLEWVACVRSNF 348 (710)
T ss_dssp GCEEEECCCSSCEEEEEEEETTTE
T ss_pred cceeccCCCCCCeEEEEEEEcCCE
Confidence 344554543 688899986653
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.55 E-value=1.1e-13 Score=110.85 Aligned_cols=212 Identities=10% Similarity=0.007 Sum_probs=123.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccc--
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEA-- 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~-- 112 (279)
.++++|+.+++... ...++......+.|+|||++|+.++.++.|.+||+.++......... .....
T Consensus 61 ~l~~~d~~~~~~~~------l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~------~~~~~~g 128 (396)
T 3c5m_A 61 NYYLLNLETQQAVQ------LTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVD------EEWKGYG 128 (396)
T ss_dssp EEEEEETTTTEEEE------CCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECC------TTEEEEE
T ss_pred eEEEEECCCCcEEE------eecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecc------cccCCCC
Confidence 35666776655432 22223333334789999999999999999999999876432111000 00000
Q ss_pred -eeeecCCCceEEEEeeCcccccCCCCcEEEEe-----cCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECC-CC
Q 023672 113 -SLVVTEGESVYDFCWFPHMSASDPTSCVFAST-----TRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TG 185 (279)
Q Consensus 113 -~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~-----~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~ 185 (279)
.+.......... .......++|+++.++.+ ..+..|.+||+.+++....... .. .+..+.|+| ++
T Consensus 129 ~~l~~~~~~~~~~--~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~-~~-----~~~~~~~sp~dg 200 (396)
T 3c5m_A 129 TWVANSDCTKLVG--IEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD-TA-----WLGHPIYRPFDD 200 (396)
T ss_dssp EEEECTTSSEEEE--EEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE-SS-----CEEEEEEETTEE
T ss_pred CEEEeccCCcccc--ccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC-Cc-----ccccceECCCCC
Confidence 000000000000 000123568888877765 3567899999998876555432 22 678899999 78
Q ss_pred CEEE-EecC------CeEEEEEccCCCCceeeeeecccccCCC-CCceEEEEEccCCCcEEEEEeCC-----CcEEEEec
Q 023672 186 TKIF-AGYN------KSVRVFDVHRPGRDFEKYSTLKGNKEGQ-AGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYRE 252 (279)
Q Consensus 186 ~~l~-~~~d------~~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~~~~~d-----g~i~~wd~ 252 (279)
..|+ ++.+ ..|.+||+... . . ..+. ... ...+..++|+| ++..|+.++.+ +.|++||+
T Consensus 201 ~~l~~~~~~~~~~~~~~l~~~d~~~~-~-~---~~l~---~~~~~~~~~~~~~sp-dg~~l~~~~~~~~~~~~~l~~~d~ 271 (396)
T 3c5m_A 201 STVGFCHEGPHDLVDARMWLVNEDGS-N-V---RKIK---EHAEGESCTHEFWIP-DGSAMAYVSYFKGQTDRVIYKANP 271 (396)
T ss_dssp EEEEEEECSCSSSCSCCCEEEETTSC-C-C---EESS---CCCTTEEEEEEEECT-TSSCEEEEEEETTTCCEEEEEECT
T ss_pred CEEEEEecCCCCCCCceEEEEECCCC-c-e---eEee---ccCCCccccceEECC-CCCEEEEEecCCCCccceEEEEEC
Confidence 7666 4322 46888888652 1 1 1121 111 23577899999 77776666543 44999999
Q ss_pred CCCeEEEEEeecCCCEEEEEEcc-CCC
Q 023672 253 DNMELLYVLHGQEGGVTHVSKLS-SAY 278 (279)
Q Consensus 253 ~~~~~~~~~~~~~~~v~~~~~sp-dg~ 278 (279)
.+++...... .. ... +.|+| ||+
T Consensus 272 ~~g~~~~l~~-~~-~~~-~~~s~~dg~ 295 (396)
T 3c5m_A 272 ETLENEEVMV-MP-PCS-HLMSNFDGS 295 (396)
T ss_dssp TTCCEEEEEE-CC-SEE-EEEECSSSS
T ss_pred CCCCeEEeee-CC-CCC-CCccCCCCc
Confidence 9887543322 22 233 88999 986
No 182
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.55 E-value=4.1e-14 Score=113.42 Aligned_cols=185 Identities=10% Similarity=0.080 Sum_probs=114.4
Q ss_pred CceEEEEEccCCCeEEEeeCC---CeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC
Q 023672 61 NFLKGIKWSPDGSSFLTSSED---KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~d---g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (279)
..+.+++|+|||++|+.+... ..|.+||+.++.... +..........+ .++|+
T Consensus 36 ~~~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~-----------------l~~~~~~~~~~~-------~~spd 91 (396)
T 3c5m_A 36 NYFYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQ-----------------LTEGKGDNTFGG-------FISTD 91 (396)
T ss_dssp CCTTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEE-----------------CCCSSCBCTTTC-------EECTT
T ss_pred eeeecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEE-----------------eecCCCCccccc-------eECCC
Confidence 347888999999998866543 368888887653211 101111111112 35899
Q ss_pred CcEEEEecCCCcEEEEECCCCeeeEEEeccCcccccc-cee-------------eEEECCCCCEEEE------ecCCeEE
Q 023672 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEIT-AAF-------------SVAFNPTGTKIFA------GYNKSVR 197 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~v~-------------~~~~~~~~~~l~~------~~d~~i~ 197 (279)
++.|+.++.++.|.+||+.+++.......+....... .+. .+.|+|+++.++. ..+..|+
T Consensus 92 g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~ 171 (396)
T 3c5m_A 92 ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLI 171 (396)
T ss_dssp SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEE
T ss_pred CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEE
Confidence 9999999999999999999887665554333210000 000 0457888887763 3456899
Q ss_pred EEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC------CcEEEEecCCCeEEEEEeec--CCCEE
Q 023672 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS------QTSAIYREDNMELLYVLHGQ--EGGVT 269 (279)
Q Consensus 198 ~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d------g~i~~wd~~~~~~~~~~~~~--~~~v~ 269 (279)
+||+.++ .. .. + ..+...+..+.|+|+++..|+..+.+ ..|.+||+.+++... +..+ ...+.
T Consensus 172 ~~d~~~g-~~-~~---~----~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~~~~~~~ 241 (396)
T 3c5m_A 172 KVDIETG-EL-EV---I----HQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRK-IKEHAEGESCT 241 (396)
T ss_dssp EEETTTC-CE-EE---E----EEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEE-SSCCCTTEEEE
T ss_pred EEECCCC-cE-Ee---e----ccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeE-eeccCCCcccc
Confidence 9999873 21 11 1 12345688999999445555554433 368889987665432 3223 22588
Q ss_pred EEEEccCCCC
Q 023672 270 HVSKLSSAYT 279 (279)
Q Consensus 270 ~~~~spdg~~ 279 (279)
.++|+|||++
T Consensus 242 ~~~~spdg~~ 251 (396)
T 3c5m_A 242 HEFWIPDGSA 251 (396)
T ss_dssp EEEECTTSSC
T ss_pred ceEECCCCCE
Confidence 8999999974
No 183
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.54 E-value=1.2e-11 Score=95.39 Aligned_cols=186 Identities=12% Similarity=0.067 Sum_probs=118.9
Q ss_pred CCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
...+.+++++++|+++++ . ++.|.+||..++......... .......+.++ +++|+|+
T Consensus 53 ~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~~~~~~~~~-------------~~~~~~~~~di-------~~d~dG~ 110 (297)
T 3g4e_A 53 DAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQSAVVLATVD-------------NDKKNNRFNDG-------KVDPAGR 110 (297)
T ss_dssp SSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTEEEEEEECC-------------TTCSSEEEEEE-------EECTTSC
T ss_pred CCceEEEEECCCCCEEEE-E-CCeEEEEECCCCcEEEEEecC-------------CCCCCCCCCCE-------EECCCCC
Confidence 467999999999995554 4 567999998865431100000 00011234444 4488898
Q ss_pred EEEEecCC---------CcEEEEECCC-CeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEcc-CCCC
Q 023672 140 VFASTTRD---------HPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVH-RPGR 206 (279)
Q Consensus 140 ~l~s~~~d---------~~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~-~~~~ 206 (279)
++++.... ..-.+|.+.. ++......... ....++|+|+++.++ +. .++.|.+||+. ..+.
T Consensus 111 l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~------~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~ 184 (297)
T 3g4e_A 111 YFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVD------ISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQ 184 (297)
T ss_dssp EEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEES------BEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCC
T ss_pred EEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccc------cccceEEcCCCCEEEEecCCCCcEEEEeccCCCCc
Confidence 76654221 2234554432 33322222111 457899999998776 44 67899999985 2122
Q ss_pred ce--eeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEc-cCCC
Q 023672 207 DF--EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKL-SSAY 278 (279)
Q Consensus 207 ~~--~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~s-pdg~ 278 (279)
.. +.+..+ ..+...+..+++++ +|.+.++...++.|..||..+++.+..+..+...+++++|. ||++
T Consensus 185 ~~~~~~~~~~----~~~~~~p~g~~~d~-~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~ 254 (297)
T 3g4e_A 185 ISNRRSVYKL----EKEEQIPDGMCIDA-EGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYS 254 (297)
T ss_dssp EEEEEEEEEC----CGGGCEEEEEEEBT-TSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGC
T ss_pred ccCcEEEEEC----CCCCCCCCeeEECC-CCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCC
Confidence 11 111111 22345678899999 88888887778889999999999999998887789999998 8875
No 184
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.53 E-value=2.5e-12 Score=110.95 Aligned_cols=203 Identities=11% Similarity=0.038 Sum_probs=132.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCe----------------EEEEeCCCCcccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKT----------------LRIFSLPENGISYDV 98 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~----------------i~iwd~~~~~~~~~~ 98 (279)
.+++||+.+++.... .+ ....+.+++|+|||+.|+.++.++. |.+|++.++.....
T Consensus 152 ~i~v~d~~tg~~~~~-----~~--~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~- 223 (710)
T 2xdw_A 152 TIKFMKVDGAKELPD-----VL--ERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDI- 223 (710)
T ss_dssp EEEEEETTTTEEEEE-----EE--EEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCE-
T ss_pred EEEEEECCCCCCCcc-----cc--cCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccce-
Confidence 567778877765431 11 1122667999999999998888766 99999976532100
Q ss_pred ccccccCCCCcccceeeec--CCCceEEEEeeCcccccCCCCcEEEEecC-----CCcEEEEECCC------Ce-eeEEE
Q 023672 99 NACSLAKDQDSYEASLVVT--EGESVYDFCWFPHMSASDPTSCVFASTTR-----DHPIHLWDATT------GL-LRCTY 164 (279)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~l~s~~~-----d~~i~i~d~~~------~~-~~~~~ 164 (279)
.+... +...+..+.| +|+|++|+.++. +..|.+||+.+ +. ....+
T Consensus 224 --------------~v~~~~~~~~~~~~~~~-------SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l 282 (710)
T 2xdw_A 224 --------------LCAEFPDEPKWMGGAEL-------SDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKL 282 (710)
T ss_dssp --------------EEECCTTCTTCEEEEEE-------CTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEE
T ss_pred --------------EEeccCCCCeEEEEEEE-------cCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEe
Confidence 01111 1223455555 889998887764 56899999986 43 34444
Q ss_pred eccCccccccceeeEEECCCCCEEE-Ee-c---CCeEEEEEccCCCCceeeeeecccccCCCC-CceEEEEEccCCCcEE
Q 023672 165 RAYDAVDEITAAFSVAFNPTGTKIF-AG-Y---NKSVRVFDVHRPGRDFEKYSTLKGNKEGQA-GIMSAIAFSPTHTGML 238 (279)
Q Consensus 165 ~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~---d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~~l 238 (279)
..+.. .+.. .|+|+|..|+ .+ . ...|.+||+.++... ....+. ..+. ..+..++|++ ++.++
T Consensus 283 ~~~~~-----~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~--~~~~l~---~~~~~~~~~~~~~~~-~~~lv 350 (710)
T 2xdw_A 283 IDNFE-----GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEES--KWKVLV---PEHEKDVLEWVACVR-SNFLV 350 (710)
T ss_dssp ECSSS-----SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGG--GCEEEE---CCCSSCEEEEEEEET-TTEEE
T ss_pred eCCCC-----cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcc--cceecc---CCCCCCeEEEEEEEc-CCEEE
Confidence 44332 3333 5888888776 44 2 347999999864210 111221 1112 3678899998 88899
Q ss_pred EEEeCCCc--EEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 239 AIGSYSQT--SAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 239 ~~~~~dg~--i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
++...|+. |++||+.+++.+..+..+.+.+.+++++|+|.
T Consensus 351 ~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~ 392 (710)
T 2xdw_A 351 LCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDT 392 (710)
T ss_dssp EEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCS
T ss_pred EEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCC
Confidence 99988885 66678778888888888877899999999874
No 185
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.53 E-value=5e-12 Score=95.92 Aligned_cols=181 Identities=10% Similarity=0.001 Sum_probs=119.4
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
+...+.+++++++++++++.. ++.|.+||........ ...........+ ++++++
T Consensus 65 ~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~~-----------------~~~~~~~~p~~i-------~~~~~g 119 (270)
T 1rwi_B 65 GLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQTV-----------------LPFDGLNYPEGL-------AVDTQG 119 (270)
T ss_dssp SCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCEE-----------------CCCCSCSSEEEE-------EECTTC
T ss_pred CcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEee-----------------eecCCcCCCcce-------EECCCC
Confidence 335678999999998666555 8899999987542210 001111234444 447788
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~ 217 (279)
.++++...++.|.+|+..+.......... ...+.+++++++++++++. .++.|.+||.... . .....
T Consensus 120 ~l~v~~~~~~~i~~~~~~~~~~~~~~~~~-----~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~---~~~~~--- 187 (270)
T 1rwi_B 120 AVYVADRGNNRVVKLAAGSKTQTVLPFTG-----LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-N---QVVLP--- 187 (270)
T ss_dssp CEEEEEGGGTEEEEECTTCCSCEECCCCS-----CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC-C---EEECC---
T ss_pred CEEEEECCCCEEEEEECCCceeEeecccc-----CCCceeEEEeCCCCEEEEECCCCEEEEEecCCC-c---eEeec---
Confidence 87777777889999976554332211111 1156789999999876666 6789999998763 1 11111
Q ss_pred cCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 218 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
..+...+.++++++ ++.++++...++.|.+||............+...+.+++++|+|+
T Consensus 188 -~~~~~~p~~i~~d~-~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~ 246 (270)
T 1rwi_B 188 -FTDITAPWGIAVDE-AGTVYVTEHNTNQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRT 246 (270)
T ss_dssp -CSSCCSEEEEEECT-TCCEEEEETTTSCEEEECTTCSCCEECCCCSCSCEEEEEECTTCC
T ss_pred -ccCCCCceEEEECC-CCCEEEEECCCCcEEEEcCCCCcceeeccCCCCCceeEEECCCCC
Confidence 12225688999999 788888877788999999876544332222335689999999985
No 186
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.52 E-value=3.9e-12 Score=99.51 Aligned_cols=200 Identities=9% Similarity=-0.056 Sum_probs=127.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.++|..+++..... . .......++++++++.+++...++.|.+||..++......
T Consensus 65 ~v~viD~~t~~~~~~i------~-~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i---------------- 121 (328)
T 3dsm_A 65 VIFAIDINTFKEVGRI------T-GFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYI---------------- 121 (328)
T ss_dssp EEEEEETTTCCEEEEE------E-CCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEE----------------
T ss_pred EEEEEECcccEEEEEc------C-CCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEE----------------
Confidence 4677888888775532 1 2356789999999854444448999999999876542211
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEec-CCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-c
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTT-RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 192 (279)
.......- .-.|..+++ .++..+++.. .++.|.++|+.+++.+..+.... .+..+.++|+|++++++ .
T Consensus 122 ~~g~~~~~---~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~------~p~~i~~~~dG~l~v~~~~ 191 (328)
T 3dsm_A 122 ECPDMDME---SGSTEQMVQ-YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI------QPTSLVMDKYNKMWTITDG 191 (328)
T ss_dssp ECTTCCTT---TCBCCCEEE-ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS------CBCCCEECTTSEEEEEBCC
T ss_pred EcCCcccc---CCCcceEEE-ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC------CccceEEcCCCCEEEEECC
Confidence 11100000 001222333 2344444443 48899999999999888776543 45689999999977765 3
Q ss_pred C----------CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEE--E
Q 023672 193 N----------KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY--V 260 (279)
Q Consensus 193 d----------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~--~ 260 (279)
+ +.|.++|..+. +....+.. .....+..++++| ++..|+.+.. .|.+||..+++... .
T Consensus 192 ~~~~~~~~~~~~~v~~id~~t~----~v~~~~~~---~~g~~p~~la~~~-d~~~lyv~~~--~v~~~d~~t~~~~~~~~ 261 (328)
T 3dsm_A 192 GYEGSPYGYEAPSLYRIDAETF----TVEKQFKF---KLGDWPSEVQLNG-TRDTLYWINN--DIWRMPVEADRVPVRPF 261 (328)
T ss_dssp BCTTCSSCBCCCEEEEEETTTT----EEEEEEEC---CTTCCCEEEEECT-TSCEEEEESS--SEEEEETTCSSCCSSCS
T ss_pred CccCCccccCCceEEEEECCCC----eEEEEEec---CCCCCceeEEEec-CCCEEEEEcc--EEEEEECCCCceeeeee
Confidence 3 78999999873 22222211 1123578999999 7777776654 89999998887532 1
Q ss_pred EeecCCCEEEEEEccCC
Q 023672 261 LHGQEGGVTHVSKLSSA 277 (279)
Q Consensus 261 ~~~~~~~v~~~~~spdg 277 (279)
+......+.+++++|++
T Consensus 262 ~~~~~~~p~gi~vdp~~ 278 (328)
T 3dsm_A 262 LEFRDTKYYGLTVNPNN 278 (328)
T ss_dssp BCCCSSCEEEEEECTTT
T ss_pred ecCCCCceEEEEEcCCC
Confidence 22123568999999954
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.52 E-value=1.1e-11 Score=97.11 Aligned_cols=187 Identities=12% Similarity=0.051 Sum_probs=121.6
Q ss_pred ccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSAS 134 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 134 (279)
.+..+...+.+++|++++++++++..++.|.+||..++.... +.......+..+.+
T Consensus 39 ~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~-----------------~~~~~~~~~~~i~~------- 94 (333)
T 2dg1_A 39 EISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKR-----------------PFVSHKANPAAIKI------- 94 (333)
T ss_dssp EEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-----------------EEECSSSSEEEEEE-------
T ss_pred EEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEE-----------------EeeCCCCCcceEEE-------
Confidence 445566678999999999988888889999999988654311 11123345666655
Q ss_pred CCCCcEEEEecCC----CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEec-------CCeEEEEEccC
Q 023672 135 DPTSCVFASTTRD----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY-------NKSVRVFDVHR 203 (279)
Q Consensus 135 ~~~~~~l~s~~~d----~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------d~~i~~~d~~~ 203 (279)
+++++++++...+ +.|.+||..++.....+.... ....+.++.++|+|+++++.. .+.|..+|...
T Consensus 95 ~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~---~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~ 171 (333)
T 2dg1_A 95 HKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLS---TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF 171 (333)
T ss_dssp CTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSS---SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS
T ss_pred CCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCc---cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC
Confidence 7788888777666 689999998876543333111 112678999999998887653 24555555543
Q ss_pred CCCceeeeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEecCC-CeEEEEE-----eecC--CCEEEEEEc
Q 023672 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDN-MELLYVL-----HGQE--GGVTHVSKL 274 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~~~-~~~~~~~-----~~~~--~~v~~~~~s 274 (279)
.....+. .....+..++|+| ++. ++++.+.++.|.+||+.+ +..+..+ .... ..+.+++++
T Consensus 172 --~~~~~~~-------~~~~~~~~i~~~~-dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d 241 (333)
T 2dg1_A 172 --RTVTPII-------QNISVANGIALST-DEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCID 241 (333)
T ss_dssp --CCEEEEE-------EEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEB
T ss_pred --CEEEEee-------cCCCcccceEECC-CCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEEC
Confidence 1122111 1123478899999 776 455656678999999964 3322211 1111 367889999
Q ss_pred cCCC
Q 023672 275 SSAY 278 (279)
Q Consensus 275 pdg~ 278 (279)
++|+
T Consensus 242 ~~G~ 245 (333)
T 2dg1_A 242 SDDN 245 (333)
T ss_dssp TTCC
T ss_pred CCCC
Confidence 9885
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.52 E-value=1.5e-12 Score=112.02 Aligned_cols=179 Identities=13% Similarity=0.018 Sum_probs=111.2
Q ss_pred CCCCceEEEEEccCCCeEE-----EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccc
Q 023672 58 IPNNFLKGIKWSPDGSSFL-----TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~-----t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (279)
+|...+.+++|||||++|| .|+.+..|++||+.+++.... .... ......++
T Consensus 118 ~~~~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~----------------~~~~-~~~~~~~~------ 174 (695)
T 2bkl_A 118 DGTVSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKV----------------DVIE-GGKYATPK------ 174 (695)
T ss_dssp SSCEEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSS----------------CCBS-CCTTCCCE------
T ss_pred CCCEEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCC----------------cccC-cccccceE------
Confidence 5666799999999999998 455567899999998754200 0000 00113344
Q ss_pred ccCCCCcEEEEecCCCc-------------EEEEECCCCeee--EEEeccCccccccceeeEEECCCCCEEEE-ecCC--
Q 023672 133 ASDPTSCVFASTTRDHP-------------IHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNK-- 194 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d~~-------------i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d~-- 194 (279)
|+|||+.|+.++.|.. |++|++.++... ..+.... +...+..+.|+|+|++|+. +.++
T Consensus 175 -wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~---~~~~~~~~~~SpDG~~l~~~~~~~~~ 250 (695)
T 2bkl_A 175 -WTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTG---DPTTFLQSDLSRDGKYLFVYILRGWS 250 (695)
T ss_dssp -ECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCC---CTTCEEEEEECTTSCCEEEEEEETTT
T ss_pred -EecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCC---CCEEEEEEEECCCCCEEEEEEeCCCC
Confidence 4889999999988776 999999887632 2222211 1125778999999998884 4444
Q ss_pred --eEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEe---CCCcEEEEecCCCeE---EEEEeec-C
Q 023672 195 --SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS---YSQTSAIYREDNMEL---LYVLHGQ-E 265 (279)
Q Consensus 195 --~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~---~dg~i~~wd~~~~~~---~~~~~~~-~ 265 (279)
.|++||..+ .....+ ..+...+....+ + ++.+++.+. .++.|.+||+.+++. ...+..+ .
T Consensus 251 ~~~l~~~~~~~--~~~~~l-------~~~~~~~~~~~~-~-~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~ 319 (695)
T 2bkl_A 251 ENDVYWKRPGE--KDFRLL-------VKGVGAKYEVHA-W-KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSS 319 (695)
T ss_dssp EEEEEEECTTC--SSCEEE-------EECSSCCEEEEE-E-TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSS
T ss_pred ceEEEEEcCCC--CceEEe-------ecCCCceEEEEe-c-CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCC
Confidence 566665433 222222 122334555566 5 344555554 257899999987753 3333333 4
Q ss_pred CCEEEEEEc
Q 023672 266 GGVTHVSKL 274 (279)
Q Consensus 266 ~~v~~~~~s 274 (279)
..+.+++|+
T Consensus 320 ~~l~~~~~~ 328 (695)
T 2bkl_A 320 ASLLSVSIV 328 (695)
T ss_dssp CEEEEEEEE
T ss_pred CeEEEEEEE
Confidence 457778877
No 189
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.51 E-value=2.4e-12 Score=101.37 Aligned_cols=184 Identities=11% Similarity=0.085 Sum_probs=114.4
Q ss_pred eeeeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCC---Ce--EEEEeCCCCccccccccccccCCC
Q 023672 33 TWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSED---KT--LRIFSLPENGISYDVNACSLAKDQ 107 (279)
Q Consensus 33 ~~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d---g~--i~iwd~~~~~~~~~~~~~~~~~~~ 107 (279)
...+++||+.+++... + ..+..++|+|||++|+.++.+ +. |.+|++.++....
T Consensus 42 ~~~l~~~d~~~~~~~~-------l----~~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~----------- 99 (347)
T 2gop_A 42 ENTIVIENLKNNARRF-------I----ENATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKK----------- 99 (347)
T ss_dssp EEEEEEEETTTCCEEE-------E----ESCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEE-----------
T ss_pred cceEEEEeCCCCceEE-------c----ccCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEE-----------
Confidence 4456777777665432 1 458899999999999877654 33 7777777543210
Q ss_pred CcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCC---------------------------CcEEEEECCCCee
Q 023672 108 DSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRD---------------------------HPIHLWDATTGLL 160 (279)
Q Consensus 108 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d---------------------------~~i~i~d~~~~~~ 160 (279)
+.. ... +..+.| +|+++.|+.++.+ ..|.+||+.+++.
T Consensus 100 ------l~~-~~~-~~~~~w-------spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~ 164 (347)
T 2gop_A 100 ------ILE-AKN-IRSLEW-------NEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEV 164 (347)
T ss_dssp ------EEE-ESE-EEEEEE-------CTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEE
T ss_pred ------EEc-CCC-ccceeE-------CCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeE
Confidence 111 122 666666 7889888887632 5689999998876
Q ss_pred eEEEeccCccccccceeeEEECCCCCEEEEe-cC------C-eEEEEEccCCCCceeeeeecccccCCCCCceEEEEEcc
Q 023672 161 RCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN------K-SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP 232 (279)
Q Consensus 161 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d------~-~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 232 (279)
+..+.. . .+..+.|+|+| +++++ .+ . ...||.+.+ +. .. .+. .+ ..+..+ +|
T Consensus 165 ~~~l~~-~------~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~-~~-~~---~l~----~~-~~~~~~--sp 224 (347)
T 2gop_A 165 IEEFEK-P------RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWED-GK-EE---KMF----EK-VSFYAV--DS 224 (347)
T ss_dssp EEEEEE-E------TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEET-TE-EE---EEE----EE-ESEEEE--EE
T ss_pred EeeecC-C------CcccccCCCCe-EEEEEecccccccccccccEEEeCC-Cc-eE---Eec----cC-cceeeE--CC
Confidence 444433 1 45689999999 66654 33 2 445555543 22 11 221 12 334444 99
Q ss_pred CCCcEEEEEeCC--------CcEEEEecCCCeEEEEEeecCCCEEE-EEEccCC
Q 023672 233 THTGMLAIGSYS--------QTSAIYREDNMELLYVLHGQEGGVTH-VSKLSSA 277 (279)
Q Consensus 233 ~~~~~l~~~~~d--------g~i~~wd~~~~~~~~~~~~~~~~v~~-~~~spdg 277 (279)
+|..|+.++.+ ..|.+|| +++.......+...+.. +.|+ ||
T Consensus 225 -dg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg 274 (347)
T 2gop_A 225 -DGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK 274 (347)
T ss_dssp -CSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE
T ss_pred -CCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc
Confidence 78777766643 3688888 66654444455667876 8898 76
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.50 E-value=1.2e-11 Score=96.76 Aligned_cols=207 Identities=8% Similarity=-0.047 Sum_probs=130.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+..+|..+++....................+.+. +++.+++...++.|.+||..+++.... +
T Consensus 18 ~l~~~d~~t~~~~~~i~~~~n~~~lg~~~~~i~~~-~~~lyv~~~~~~~v~viD~~t~~~~~~----------------i 80 (328)
T 3dsm_A 18 TLSYYDPATCEVENEVFYRANGFKLGDVAQSMVIR-DGIGWIVVNNSHVIFAIDINTFKEVGR----------------I 80 (328)
T ss_dssp EEEEEETTTTEEECSHHHHHHSSCCBSCEEEEEEE-TTEEEEEEGGGTEEEEEETTTCCEEEE----------------E
T ss_pred eEEEEECCCCEEhhhhHhhhcCcccCccceEEEEE-CCEEEEEEcCCCEEEEEECcccEEEEE----------------c
Confidence 46778888776543210000011122446777774 345555666689999999997654221 1
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe--c
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--Y 192 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~ 192 (279)
........+ ++++++..+++...++.|.+||+.+++....+...........+..+++ .+++++++. .
T Consensus 81 --~~~~~p~~i-------~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~ 150 (328)
T 3dsm_A 81 --TGFTSPRYI-------HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSY 150 (328)
T ss_dssp --ECCSSEEEE-------EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTT
T ss_pred --CCCCCCcEE-------EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCC
Confidence 112233444 4466775555554789999999999988877765441111113456777 444444454 3
Q ss_pred CCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC----------CcEEEEecCCCeEEEEEe
Q 023672 193 NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS----------QTSAIYREDNMELLYVLH 262 (279)
Q Consensus 193 d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d----------g~i~~wd~~~~~~~~~~~ 262 (279)
++.|.++|+.++ +....+.. ......++++| ++.+++++..+ +.|.++|..+++....+.
T Consensus 151 ~~~v~viD~~t~----~~~~~i~~-----g~~p~~i~~~~-dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~ 220 (328)
T 3dsm_A 151 QNRILKIDTETD----KVVDELTI-----GIQPTSLVMDK-YNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFK 220 (328)
T ss_dssp CCEEEEEETTTT----EEEEEEEC-----SSCBCCCEECT-TSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEE
T ss_pred CCEEEEEECCCC----eEEEEEEc-----CCCccceEEcC-CCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEe
Confidence 899999999874 22222211 12356789999 88877777654 789999999999887776
Q ss_pred ec-CCCEEEEEEccCCC
Q 023672 263 GQ-EGGVTHVSKLSSAY 278 (279)
Q Consensus 263 ~~-~~~v~~~~~spdg~ 278 (279)
.. ...+..++|+|||+
T Consensus 221 ~~~g~~p~~la~~~d~~ 237 (328)
T 3dsm_A 221 FKLGDWPSEVQLNGTRD 237 (328)
T ss_dssp CCTTCCCEEEEECTTSC
T ss_pred cCCCCCceeEEEecCCC
Confidence 43 23689999999986
No 191
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.48 E-value=4.5e-12 Score=100.44 Aligned_cols=107 Identities=9% Similarity=0.090 Sum_probs=73.3
Q ss_pred CCCeEEEee------CCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEe
Q 023672 71 DGSSFLTSS------EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAST 144 (279)
Q Consensus 71 ~~~~l~t~~------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~ 144 (279)
+++++++.. .|+.|.+||..+++.... +.. ...| .++++|++++++++
T Consensus 14 ~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~----------------i~~---------g~~p-~i~~spdg~~lyv~ 67 (361)
T 2oiz_A 14 QENRIYVMDSVFMHLTESRVHVYDYTNGKFLGM----------------VPT---------AFNG-HVQVSNDGKKIYTM 67 (361)
T ss_dssp GGGEEEEEECCGGGGGGCEEEEEETTTCCEEEE----------------EEC---------CEEE-EEEECTTSSEEEEE
T ss_pred CCCEEEEECCCCCccccCeEEEEECCCCeEEEE----------------ecC---------CCCC-ceEECCCCCEEEEE
Confidence 555555543 478999999887643210 111 1233 45679999999988
Q ss_pred c----------CCCcEEEEECCCCeeeEEEeccCcc-ccccceeeEEECCCCCEEEEe--c-CCeEEEEEccC
Q 023672 145 T----------RDHPIHLWDATTGLLRCTYRAYDAV-DEITAAFSVAFNPTGTKIFAG--Y-NKSVRVFDVHR 203 (279)
Q Consensus 145 ~----------~d~~i~i~d~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~--~-d~~i~~~d~~~ 203 (279)
+ .++.|.+||+.+++.+..+...... .....+..++|+|+|++++++ . ++.|.+||+.+
T Consensus 68 ~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~ 140 (361)
T 2oiz_A 68 TTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAK 140 (361)
T ss_dssp EEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTT
T ss_pred EecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCC
Confidence 6 3667999999999888887654211 011146789999999999855 3 68899999876
No 192
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.47 E-value=7.4e-11 Score=91.44 Aligned_cols=210 Identities=12% Similarity=0.121 Sum_probs=130.2
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccC-CCeEEEeeCCCeEEEEeCCCCccccc-cccccccCCCCcccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYD-VNACSLAKDQDSYEA 112 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~-~~~~~~~~~~~~~~~ 112 (279)
.+..||..+++...... ....++...+.+++++++ ++++++.. .+.|.+||.. +..... ...
T Consensus 47 ~i~~~d~~~g~~~~~~~--~~~~~~~~~~~~i~~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~------------ 110 (314)
T 1pjx_A 47 EILRIDLKTGKKTVICK--PEVNGYGGIPAGCQCDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKD------------ 110 (314)
T ss_dssp EEEEECTTTCCEEEEEC--CEETTEECCEEEEEECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBC------------
T ss_pred EEEEEeCCCCcEEEEEe--cccCCCCCCCceEEEecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEecc------------
Confidence 46677776665432111 011235567999999999 76555444 4478899987 533110 000
Q ss_pred eeeecCCCceEEEEeeCcccccCCCCcEEEEecCC---------------CcEEEEECCCCeeeEEEeccCcccccccee
Q 023672 113 SLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRD---------------HPIHLWDATTGLLRCTYRAYDAVDEITAAF 177 (279)
Q Consensus 113 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d---------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~ 177 (279)
........+..+ +++++++++++...+ +.|..+|.. ++......... .+.
T Consensus 111 -~~~~~~~~~~~i-------~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~------~~~ 175 (314)
T 1pjx_A 111 -SEGRRMQGCNDC-------AFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ------FPN 175 (314)
T ss_dssp -TTSCBCBCCCEE-------EECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES------SEE
T ss_pred -CCCccccCCcCE-------EECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC------Ccc
Confidence 000011223344 457888877776554 567777765 55433322111 457
Q ss_pred eEEEC----CCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeecccccCCCC-CceEEEEEccCCCcEEEEEeCCCcEEEE
Q 023672 178 SVAFN----PTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQA-GIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (279)
Q Consensus 178 ~~~~~----~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~v~~~~~sp~~~~~l~~~~~dg~i~~w 250 (279)
.++|+ |+++.++ +. .++.|.+||+...+. ......+ .....+. ..+..+++++ ++.++++...++.|.+|
T Consensus 176 ~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~-~~~~~~~-~~~~~~~~~~p~~i~~d~-~G~l~v~~~~~~~i~~~ 252 (314)
T 1pjx_A 176 GIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAK-IENKKVW-GHIPGTHEGGADGMDFDE-DNNLLVANWGSSHIEVF 252 (314)
T ss_dssp EEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTE-EEEEEEE-EECCCCSSCEEEEEEEBT-TCCEEEEEETTTEEEEE
T ss_pred eEEEecccCCCCCEEEEEECCCCeEEEEECCCCCc-cccceEE-EECCCCCCCCCCceEECC-CCCEEEEEcCCCEEEEE
Confidence 88999 9997665 44 678999999872121 1111111 1112333 5678899999 88888887778899999
Q ss_pred ecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 251 REDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 251 d~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
|..+++.+..+..+...+.+++|+|||+
T Consensus 253 d~~~g~~~~~~~~~~~~~~~i~~~~dg~ 280 (314)
T 1pjx_A 253 GPDGGQPKMRIRCPFEKPSNLHFKPQTK 280 (314)
T ss_dssp CTTCBSCSEEEECSSSCEEEEEECTTSS
T ss_pred cCCCCcEeEEEeCCCCCceeEEECCCCC
Confidence 9987887777777777899999999986
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.47 E-value=5.5e-11 Score=99.26 Aligned_cols=178 Identities=11% Similarity=-0.045 Sum_probs=123.8
Q ss_pred ccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCC
Q 023672 69 SPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDH 148 (279)
Q Consensus 69 ~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~ 148 (279)
++.+.++++...+++|.++|..+++.... ...+..+..+ .++|+++++++++.|+
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~------------------i~~g~~p~~v-------~~SpDGr~lyv~~~dg 218 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTV------------------LDTGYAVHIS-------RLSASGRYLFVIGRDG 218 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEE------------------EECSSCEEEE-------EECTTSCEEEEEETTS
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEE------------------EeCCCCccce-------EECCCCCEEEEEcCCC
Confidence 34555677788899999999987654211 1122233333 5689999999999999
Q ss_pred cEEEEECC--CCeeeEEEeccCccccccceeeEEEC----CCCCEEEE-e-cCCeEEEEEccCCCCceeeeeecccccC-
Q 023672 149 PIHLWDAT--TGLLRCTYRAYDAVDEITAAFSVAFN----PTGTKIFA-G-YNKSVRVFDVHRPGRDFEKYSTLKGNKE- 219 (279)
Q Consensus 149 ~i~i~d~~--~~~~~~~~~~~~~~~~~~~v~~~~~~----~~~~~l~~-~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~- 219 (279)
.|.+||+. +++.+..+.... ....++|+ |+|+++++ . .++.+.++|..+ .+....+........
T Consensus 219 ~V~viD~~~~t~~~v~~i~~G~------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t-~~~~~~i~~~~~~~~~ 291 (567)
T 1qks_A 219 KVNMIDLWMKEPTTVAEIKIGS------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGET-LEPKKIQSTRGMTYDE 291 (567)
T ss_dssp EEEEEETTSSSCCEEEEEECCS------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTT-CCEEEEEECCEECTTT
T ss_pred eEEEEECCCCCCcEeEEEecCC------CCceeEEccccCCCCCEEEEEEccCCeEEEEECCC-CcEEEEEecccccccc
Confidence 99999996 777777776544 45789999 69999884 4 789999999887 333333322111001
Q ss_pred --CCCC-ceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEE--EEEeecCCCEEEEEEccCCCC
Q 023672 220 --GQAG-IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL--YVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 220 --~~~~-~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~--~~~~~~~~~v~~~~~spdg~~ 279 (279)
.|.. .+..+..++++..+++....+|.|.++|..+.+.+ ..+. ......++.|+|||+|
T Consensus 292 ~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~-~~~~~~d~~~~pdgr~ 355 (567)
T 1qks_A 292 QEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEIS-AERFLHDGGLDGSHRY 355 (567)
T ss_dssp CCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEE-CCSSEEEEEECTTSCE
T ss_pred ccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCccceeeeee-ccccccCceECCCCCE
Confidence 1222 57788999955667777788899999998776433 2332 3446788999999985
No 194
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.43 E-value=3.4e-11 Score=91.66 Aligned_cols=172 Identities=11% Similarity=0.047 Sum_probs=118.9
Q ss_pred CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcE
Q 023672 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (279)
Q Consensus 71 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i 150 (279)
.++.|++++.|+.|.+||.++++..... .......+.++ +++|+|++++ +.++.|
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~----------------~~~~~~~~~~~-------~~~pdG~ilv--s~~~~V 58 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEY----------------PLEKGWECNSV-------AATKAGEILF--SYSKGA 58 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEE----------------ECCTTCCCCEE-------EECTTSCEEE--ECBSEE
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEe----------------CCCccCCCcCe-------EECCCCCEEE--eCCCCE
Confidence 4578999999999999999887653221 11111123333 4588999888 347789
Q ss_pred EEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-c-CCeEEEEEccCCCCceeeeeecccccCCCCCceEEE
Q 023672 151 HLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y-NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAI 228 (279)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (279)
..||. +++.+..+..... ..+.++.+.++|+.+++. . ++.+..+|.. ++....... ......+......+
T Consensus 59 ~~~d~-~G~~~W~~~~~~~----~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~~--Gk~l~~~~~-~~~~~~~~~~~~~v 130 (276)
T 3no2_A 59 KMITR-DGRELWNIAAPAG----CEMQTARILPDGNALVAWCGHPSTILEVNMK--GEVLSKTEF-ETGIERPHAQFRQI 130 (276)
T ss_dssp EEECT-TSCEEEEEECCTT----CEEEEEEECTTSCEEEEEESTTEEEEEECTT--SCEEEEEEE-CCSCSSGGGSCSCC
T ss_pred EEECC-CCCEEEEEcCCCC----ccccccEECCCCCEEEEecCCCCEEEEEeCC--CCEEEEEec-cCCCCcccccccCc
Confidence 99999 8999988886421 157789999999999865 4 6677777753 333332211 11111222345566
Q ss_pred EEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 229 AFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 229 ~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
++.+ ++.++++...++.|..||.. |+.+.++... ..+.++.+.++|+
T Consensus 131 ~~~~-~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~ 177 (276)
T 3no2_A 131 NKNK-KGNYLVPLFATSEVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGD 177 (276)
T ss_dssp EECT-TSCEEEEETTTTEEEEECTT-SCEEEEEECS-SCCCEEEECTTSC
T ss_pred eECC-CCCEEEEecCCCEEEEECCC-CCEEEEEECC-CCccceeEcCCCC
Confidence 7889 89999999999999999987 9998888754 3456677777775
No 195
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.42 E-value=2.2e-10 Score=90.95 Aligned_cols=205 Identities=10% Similarity=-0.011 Sum_probs=117.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEee----------CCCeEEEEeCCCCcccccccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLA 104 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~~ 104 (279)
.+.++|..+++... .+.....+ .++++|||++|+++. .++.|.+||..+.+.....
T Consensus 48 ~v~v~D~~t~~~~~------~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i------ 113 (373)
T 2mad_H 48 QQWVLDAGSGSILG------HVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADI------ 113 (373)
T ss_pred EEEEEECCCCeEEE------EecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEE------
Confidence 45777777776543 22222233 899999999998875 3678999999865432211
Q ss_pred CCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecC--CCcEEEEECCCCeeeEE-EeccCccccccceeeEEE
Q 023672 105 KDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR--DHPIHLWDATTGLLRCT-YRAYDAVDEITAAFSVAF 181 (279)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~--d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~v~~~~~ 181 (279)
......... ..-.|..++++|+|++|+++.. ++.|.++| .+++.+.. +.... ++.+
T Consensus 114 ----------~~~~~~~~~-~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---------~~~~ 172 (373)
T 2mad_H 114 ----------ELPDAPRFD-VGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---------CYHI 172 (373)
T ss_pred ----------ECCCccccc-cCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---------eEEE
Confidence 110000000 0012445577999999998874 47899999 99988777 55432 1223
Q ss_pred CCCCCEEE--EecCCeEEEEEc-----------------------------------------------cCCCCceeeee
Q 023672 182 NPTGTKIF--AGYNKSVRVFDV-----------------------------------------------HRPGRDFEKYS 212 (279)
Q Consensus 182 ~~~~~~l~--~~~d~~i~~~d~-----------------------------------------------~~~~~~~~~~~ 212 (279)
.|++...+ .+.||.+.++|. ..... ....
T Consensus 173 ~~~~~~~~~~~~~dg~~~~vd~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~--~v~~ 250 (373)
T 2mad_H 173 HPGAPSTFYLLCAQGGLAKTDHAGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGA--TNKA 250 (373)
T ss_pred EeCCCceEEEEcCCCCEEEEECCCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcc--eEee
Confidence 33332111 224444444444 22100 0000
Q ss_pred ecccc------cCCCCCceEEEEEccCCCcEEEEEeC----------CCcEEEEecCCCeEEEEEeecCCCEEEEEEccC
Q 023672 213 TLKGN------KEGQAGIMSAIAFSPTHTGMLAIGSY----------SQTSAIYREDNMELLYVLHGQEGGVTHVSKLSS 276 (279)
Q Consensus 213 ~~~~~------~~~~~~~v~~~~~sp~~~~~l~~~~~----------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spd 276 (279)
.+... ..-.......+.++| ++..|+.+.. ++.|.++|+.+++.+.++.. .....+++|+||
T Consensus 251 ~~~~~~~~~~~~~~~p~g~~~~~~s~-d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~D 328 (373)
T 2mad_H 251 PIDALSGGRKADTWRPGGWQQVAYLK-SSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQD 328 (373)
T ss_pred eeeecCCcccccceecCceEeEEECC-CCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCC
Confidence 00000 000012233477888 5555555432 35799999999999998864 345799999999
Q ss_pred CC
Q 023672 277 AY 278 (279)
Q Consensus 277 g~ 278 (279)
|+
T Consensus 329 g~ 330 (373)
T 2mad_H 329 GG 330 (373)
T ss_pred CC
Confidence 97
No 196
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.41 E-value=5.6e-11 Score=90.11 Aligned_cols=178 Identities=8% Similarity=0.014 Sum_probs=115.9
Q ss_pred ceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE
Q 023672 62 FLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (279)
Q Consensus 62 ~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (279)
...++++++++++++ +.+.++.|.+|+..+..... ....... .|..+++++++++
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~-----------------~~~~~~~-------~p~~i~~~~~g~l 80 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTV-----------------LPFNGLY-------QPQGLAVDGAGTV 80 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EE-----------------CCCCSCC-------SCCCEEECTTCCE
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccce-----------------EeeCCcC-------CcceeEECCCCCE
Confidence 678999999998776 54778999999876432100 0001111 2334456888886
Q ss_pred EEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccC
Q 023672 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (279)
Q Consensus 141 l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 219 (279)
+++.. ++.|.+||...... ..+.... ...+..++++++|+++++. .++.|.+|+..+. .. .. .. .
T Consensus 81 ~v~~~-~~~i~~~d~~~~~~-~~~~~~~----~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-~~--~~-~~----~ 146 (270)
T 1rwi_B 81 YVTDF-NNRVVTLAAGSNNQ-TVLPFDG----LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSK-TQ--TV-LP----F 146 (270)
T ss_dssp EEEET-TTEEEEECTTCSCC-EECCCCS----CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCC-SC--EE-CC----C
T ss_pred EEEcC-CCEEEEEeCCCceE-eeeecCC----cCCCcceEECCCCCEEEEECCCCEEEEEECCCc-ee--Ee-ec----c
Confidence 66666 88999999876543 2222111 1267899999999877765 7889999976542 11 11 11 1
Q ss_pred CCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 220 ~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
.....+.+++++| ++.++++...++.|.+||............+...+.+++++++|+
T Consensus 147 ~~~~~p~~i~~~~-~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~ 204 (270)
T 1rwi_B 147 TGLNDPDGVAVDN-SGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGT 204 (270)
T ss_dssp CSCCSCCCEEECT-TCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCC
T ss_pred ccCCCceeEEEeC-CCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCC
Confidence 2233577899999 788888777788999999887665433333335789999999884
No 197
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.41 E-value=9.1e-10 Score=85.96 Aligned_cols=182 Identities=13% Similarity=0.084 Sum_probs=115.6
Q ss_pred CCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
...+.+++|+++|+++++. .+ .|.+||..++........ . .......+.++.+ +|+|+
T Consensus 89 ~~~v~~i~~~~dg~l~v~~-~~-gl~~~d~~~g~~~~~~~~------~-------~~~~~~~~~~i~~-------d~~G~ 146 (326)
T 2ghs_A 89 PFMGSALAKISDSKQLIAS-DD-GLFLRDTATGVLTLHAEL------E-------SDLPGNRSNDGRM-------HPSGA 146 (326)
T ss_dssp SSCEEEEEEEETTEEEEEE-TT-EEEEEETTTCCEEEEECS------S-------TTCTTEEEEEEEE-------CTTSC
T ss_pred CCcceEEEEeCCCeEEEEE-CC-CEEEEECCCCcEEEEeeC------C-------CCCCCCCCCCEEE-------CCCCC
Confidence 3579999999999877654 44 489999876643110000 0 0001123455544 77888
Q ss_pred EEEEecC------CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEcc--CCC-Cce
Q 023672 140 VFASTTR------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVH--RPG-RDF 208 (279)
Q Consensus 140 ~l~s~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~--~~~-~~~ 208 (279)
++++... .+.|..++ +++...... ... ....++|+|+++.++ +. .++.|.+||+. + + ...
T Consensus 147 l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-~~~-----~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~-Gl~~~ 217 (326)
T 2ghs_A 147 LWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-DIS-----IPNSICFSPDGTTGYFVDTKVNRLMRVPLDART-GLPTG 217 (326)
T ss_dssp EEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-EES-----SEEEEEECTTSCEEEEEETTTCEEEEEEBCTTT-CCBSS
T ss_pred EEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-CCc-----ccCCeEEcCCCCEEEEEECCCCEEEEEEccccc-CCccc
Confidence 7665432 24455556 455433222 111 456899999998776 44 57899999986 3 2 111
Q ss_pred --eeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEc-cCCC
Q 023672 209 --EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKL-SSAY 278 (279)
Q Consensus 209 --~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~s-pdg~ 278 (279)
..+..+ ......+..+++++ ++.++++...++.|.+||. +++.+..+..+...+++++|+ ||++
T Consensus 218 ~~~~~~~~----~~~~~~p~gi~~d~-~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~ 284 (326)
T 2ghs_A 218 KAEVFIDS----TGIKGGMDGSVCDA-EGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDAS 284 (326)
T ss_dssp CCEEEEEC----TTSSSEEEEEEECT-TSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSC
T ss_pred CceEEEEC----CCCCCCCCeeEECC-CCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCC
Confidence 111111 22334577899999 7887777766788999998 677777887777789999998 8875
No 198
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.40 E-value=6.3e-11 Score=93.35 Aligned_cols=217 Identities=11% Similarity=0.065 Sum_probs=121.0
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEee----------CCCeEEEEeCCCCcccccccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLA 104 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~~ 104 (279)
.+.++|..+.+.+.. +.....+ .++++|||++|++++ .++.|.+||..+.+.....
T Consensus 60 ~V~ViD~~t~~v~~~------I~vG~~P--~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I------ 125 (386)
T 3sjl_D 60 QQFVIDGEAGRVIGM------IDGGFLP--NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADI------ 125 (386)
T ss_dssp EEEEEETTTTEEEEE------EEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEE------
T ss_pred EEEEEECCCCeEEEE------EECCCCC--cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEE------
Confidence 455667777666542 2222223 399999999888775 3678999999976543221
Q ss_pred CCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecC--CCcEEEEECCCCeeeEEEeccCcc------------
Q 023672 105 KDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR--DHPIHLWDATTGLLRCTYRAYDAV------------ 170 (279)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~--d~~i~i~d~~~~~~~~~~~~~~~~------------ 170 (279)
....+..+ ...-.|..++++|+|++++++.. ++.|.++|+.+++.+.++......
T Consensus 126 ----------~v~~g~r~-~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P~g~~~~~~ 194 (386)
T 3sjl_D 126 ----------ELPDAPRF-LVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFPTAPDTFFM 194 (386)
T ss_dssp ----------EETTCCCC-CBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEE
T ss_pred ----------ECCCcccc-ccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeecCCCceeEE
Confidence 11110000 00113555677888888777753 577888888888776666432110
Q ss_pred ------------ccccce----------------eeEEE-CCCCCEEEEecCCeEEEEEccCCCCce-eeeeeccc---c
Q 023672 171 ------------DEITAA----------------FSVAF-NPTGTKIFAGYNKSVRVFDVHRPGRDF-EKYSTLKG---N 217 (279)
Q Consensus 171 ------------~~~~~v----------------~~~~~-~~~~~~l~~~~d~~i~~~d~~~~~~~~-~~~~~~~~---~ 217 (279)
.....+ ....| .++|++++++.++.|++.|+....... ..+..+.. .
T Consensus 195 ~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~vs~~g~V~v~d~~~~~~~v~~~~~~~~~~~~~ 274 (386)
T 3sjl_D 195 HCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVWPTYTGKIHQIDLSSGDAKFLPAVEALTEAERA 274 (386)
T ss_dssp EETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEEEBTTSEEEEEECTTSSCEECCCEESSCHHHHH
T ss_pred ECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEEEeCCCEEEEEECCCCcceeecceecccccccc
Confidence 000000 01223 244555555556667777765421111 01100000 0
Q ss_pred cCCCCCceEEEEEccCCCcEEEEEeC----------CCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 218 KEGQAGIMSAIAFSPTHTGMLAIGSY----------SQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 218 ~~~~~~~v~~~~~sp~~~~~l~~~~~----------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
..-.......++++| ++..|+.... .+.|.+.|+.+++.+..+..- ..+.+|+|+|||+
T Consensus 275 ~g~~p~g~q~~a~~~-~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg-~~~~~lavs~D~~ 343 (386)
T 3sjl_D 275 DGWRPGGWQQVAYHR-ALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMG-HEIDSINVSQDEK 343 (386)
T ss_dssp TTEEECSSSCEEEET-TTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECSSSS
T ss_pred ccccCCCcceeeECC-CCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECC-CCcceEEECCCCC
Confidence 000112333577788 5555555432 256999999999999888753 3688999999996
No 199
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.39 E-value=5.2e-11 Score=93.70 Aligned_cols=182 Identities=9% Similarity=0.089 Sum_probs=111.6
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCC---------------------------CeEEEE
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSED---------------------------KTLRIF 87 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~d---------------------------g~i~iw 87 (279)
.++++++.+++... +..+.. +..++|+|||+.|+.++.+ ..|.+|
T Consensus 86 ~l~~~~~~~g~~~~-------l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~ 157 (347)
T 2gop_A 86 EIWVADLETLSSKK-------ILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIF 157 (347)
T ss_dssp EEEEEETTTTEEEE-------EEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEE
T ss_pred eEEEEECCCCceEE-------EEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEE
Confidence 46667776655432 111223 8999999999999877642 568888
Q ss_pred eCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCC-------cEEEEECCCCee
Q 023672 88 SLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDH-------PIHLWDATTGLL 160 (279)
Q Consensus 88 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~-------~i~i~d~~~~~~ 160 (279)
|+.++.... .+.. . .+..+.| +|++ +++++..+. ...+|.+.+++.
T Consensus 158 d~~~~~~~~----------------~l~~--~-~~~~~~~-------spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~ 210 (347)
T 2gop_A 158 DTESEEVIE----------------EFEK--P-RFSSGIW-------HRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKE 210 (347)
T ss_dssp ETTTTEEEE----------------EEEE--E-TTCEEEE-------ETTE-EEEEEECCCSSCCSSCCEEEEEEETTEE
T ss_pred ECCCCeEEe----------------eecC--C-CcccccC-------CCCe-EEEEEecccccccccccccEEEeCCCce
Confidence 887653200 0111 1 4445555 6788 777775542 334444445554
Q ss_pred eEEEeccCccccccceeeEEECCCCCEEE-EecC--------CeEEEEEccCCCCceeeeeecccccCCCCCceEE-EEE
Q 023672 161 RCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN--------KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSA-IAF 230 (279)
Q Consensus 161 ~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~d--------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~ 230 (279)
.. +..+ . .+..+ +|+|+.|+ ++.+ ..|.+|| + +. .. .+ ...+...+.. +.|
T Consensus 211 ~~-l~~~-~-----~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~-~~---~~-~l---~~~~~~~~~~~~~~ 271 (347)
T 2gop_A 211 EK-MFEK-V-----SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--G-KE---VM-GI---LDEVDRGVGQAKIK 271 (347)
T ss_dssp EE-EEEE-E-----SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--S-SC---EE-ES---STTCCSEEEEEEEE
T ss_pred EE-eccC-c-----ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--C-Cc---eE-ec---cccCCcccCCccEE
Confidence 33 3222 2 34444 99999887 4432 4688888 3 22 11 11 1345667776 899
Q ss_pred ccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEcc
Q 023672 231 SPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLS 275 (279)
Q Consensus 231 sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~sp 275 (279)
+ ++ ++++++.++.++|| +.+++.. .+..+...|.+++|+|
T Consensus 272 s--dg-~~~~~~~~~~~~l~-~~~g~~~-~~~~~~~~v~~~~~s~ 311 (347)
T 2gop_A 272 D--GK-VYFTLFEEGSVNLY-IWDGEIK-PIAKGRHWIMGFDVDE 311 (347)
T ss_dssp T--TE-EEEEEEETTEEEEE-EESSSEE-EEECSSSEEEEEEESS
T ss_pred c--Cc-EEEEEecCCcEEEE-EcCCceE-EEecCCCeEEeeeeeC
Confidence 8 45 88999999999999 8866654 3444577899999988
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.37 E-value=2.4e-09 Score=82.15 Aligned_cols=180 Identities=9% Similarity=0.097 Sum_probs=121.4
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeee-cCCCceEEEEeeCcccccCCC
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVV-TEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 137 (279)
+...+.++++++++.++++...++.|..||.. +.... +.. .....+..+. ++++
T Consensus 55 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-----------------~~~~~~~~~~~~i~-------~~~~ 109 (299)
T 2z2n_A 55 PDAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKE-----------------YTLPNPDSAPYGIT-------EGPN 109 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-----------------EECSSTTCCEEEEE-------ECTT
T ss_pred ccCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEE-----------------EeCCCcCCCceeeE-------ECCC
Confidence 45679999999999988877778899999876 22100 010 1223444454 4778
Q ss_pred CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeeccc
Q 023672 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~ 216 (279)
+.++++...++.|..||. +++.... ..... ...+..++++++++++++. .++.|..||. + +.. ... ..
T Consensus 110 g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~~~---~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~-g~~-~~~-~~-- 178 (299)
T 2z2n_A 110 GDIWFTEMNGNRIGRITD-DGKIREY-ELPNK---GSYPSFITLGSDNALWFTENQNNAIGRITE-S-GDI-TEF-KI-- 178 (299)
T ss_dssp SCEEEEETTTTEEEEECT-TCCEEEE-ECSST---TCCEEEEEECTTSCEEEEETTTTEEEEECT-T-CCE-EEE-EC--
T ss_pred CCEEEEecCCceEEEECC-CCCEEEe-cCCCC---CCCCceEEEcCCCCEEEEeCCCCEEEEEcC-C-CcE-EEe-eC--
Confidence 888887777889999998 5554322 21111 1267899999999887766 6789999998 4 221 111 11
Q ss_pred ccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEE-EeecCCCEEEEEEccCCC
Q 023672 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV-LHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 217 ~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~spdg~ 278 (279)
......+.++++++ ++.++++...++.|.+||. +++.... +..+...+.+++++++|+
T Consensus 179 --~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~ 237 (299)
T 2z2n_A 179 --PTPASGPVGITKGN-DDALWFVEIIGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGID 237 (299)
T ss_dssp --SSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred --CCCCCcceeEEECC-CCCEEEEccCCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCC
Confidence 22344688999999 7888777777889999998 6664332 223446789999999985
No 201
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.37 E-value=1e-09 Score=84.23 Aligned_cols=184 Identities=13% Similarity=0.151 Sum_probs=123.3
Q ss_pred cCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccC
Q 023672 56 SSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD 135 (279)
Q Consensus 56 ~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 135 (279)
+..+...+.+++++++|+.+++...++.|.+||.. +..... ........+..+. ++
T Consensus 10 ~~~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~----------------~~~~~~~~~~~i~-------~~ 65 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEY----------------PLPTPDAKVMCLT-------IS 65 (299)
T ss_dssp CCSSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEE----------------ECSSTTCCEEEEE-------EC
T ss_pred CCCcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEe----------------cCCcccCceeeEE-------EC
Confidence 33455679999999999977776668899999987 432110 0001123444554 47
Q ss_pred CCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeec
Q 023672 136 PTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 136 ~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
+++.++++...++.|..||.. ++. ..+.... ....+.+++++++++++++. .++.|.+||. ++ .. ... ..
T Consensus 66 ~~g~l~v~~~~~~~i~~~~~~-g~~-~~~~~~~---~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g-~~-~~~-~~ 136 (299)
T 2z2n_A 66 SDGEVWFTENAANKIGRITKK-GII-KEYTLPN---PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DG-KI-REY-EL 136 (299)
T ss_dssp TTSCEEEEETTTTEEEEECTT-SCE-EEEECSS---TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC-CE-EEE-EC
T ss_pred CCCCEEEeCCCCCeEEEECCC-CcE-EEEeCCC---cCCCceeeEECCCCCEEEEecCCceEEEECC-CC-CE-EEe-cC
Confidence 788888877778889999986 432 2332211 11267899999999888776 6789999998 32 21 111 11
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEE-EeecCCCEEEEEEccCCC
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV-LHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~spdg~ 278 (279)
......+..+++++ ++.++++...++.|..||. +++.... +......+.++++.++|+
T Consensus 137 ----~~~~~~~~~i~~~~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~ 195 (299)
T 2z2n_A 137 ----PNKGSYPSFITLGS-DNALWFTENQNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDA 195 (299)
T ss_dssp ----SSTTCCEEEEEECT-TSCEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS
T ss_pred ----CCCCCCCceEEEcC-CCCEEEEeCCCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCC
Confidence 22345688999999 7888887777789999998 6665432 233345688999999885
No 202
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.36 E-value=1.1e-10 Score=101.18 Aligned_cols=179 Identities=12% Similarity=0.013 Sum_probs=107.1
Q ss_pred CCCCceEEEEEccCCCeEEEeeCC-----CeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccc
Q 023672 58 IPNNFLKGIKWSPDGSSFLTSSED-----KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~t~~~d-----g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (279)
+|...+..++|||||++||.++.+ ..|++||+.+++.... .. ....+..+
T Consensus 160 ~~~~~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-----------------~~-~~~~~~~~------- 214 (741)
T 1yr2_A 160 DGATALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-----------------EL-KWVKFSGL------- 214 (741)
T ss_dssp ---EEEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEE-----------------EE-EEEESCCC-------
T ss_pred CCCEEEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCc-----------------cC-CCceeccE-------
Confidence 344468899999999999876543 4699999997654210 00 00011233
Q ss_pred ccCCCCcEEEEecCCCc--------------EEEEECCCCee--eEEEeccCccccccceeeEEECCCCCEEEE-ecC--
Q 023672 133 ASDPTSCVFASTTRDHP--------------IHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN-- 193 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d~~--------------i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d-- 193 (279)
+|+|| +.|+.++.++. |++|++.++.. ...+..... ...+..+.|+|||++|+. +.+
T Consensus 215 ~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~---~~~~~~~~~SpDG~~l~~~~~~~~ 290 (741)
T 1yr2_A 215 AWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPEL---PKRGHGASVSSDGRWVVITSSEGT 290 (741)
T ss_dssp EESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTC---TTCEEEEEECTTSCEEEEEEECTT
T ss_pred EEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCC---CeEEEEEEECCCCCEEEEEEEccC
Confidence 45888 88888776554 88999987653 222222211 114678999999998883 343
Q ss_pred ---CeEEEEEccCCCCc-eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC----CCcEEEEecCCC--eEEEEEee
Q 023672 194 ---KSVRVFDVHRPGRD-FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY----SQTSAIYREDNM--ELLYVLHG 263 (279)
Q Consensus 194 ---~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~----dg~i~~wd~~~~--~~~~~~~~ 263 (279)
..|++||+.++... .. .+ ..+...+... ++| ++..|+..+. ++.|.+||+.++ +....+..
T Consensus 291 ~~~~~l~~~d~~~~~~~~~~---~l----~~~~~~~~~~-~~~-dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~ 361 (741)
T 1yr2_A 291 DPVNTVHVARVTNGKIGPVT---AL----IPDLKAQWDF-VDG-VGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPE 361 (741)
T ss_dssp CSCCEEEEEEEETTEECCCE---EE----ECSSSSCEEE-EEE-ETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECC
T ss_pred CCcceEEEEECCCCCCcccE---Ee----cCCCCceEEE-Eec-cCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecC
Confidence 38999999863111 22 22 1222334444 347 5666665554 345999999874 34444444
Q ss_pred cCCCEEEEEEc
Q 023672 264 QEGGVTHVSKL 274 (279)
Q Consensus 264 ~~~~v~~~~~s 274 (279)
+...+.+++|+
T Consensus 362 ~~~~l~~~~~~ 372 (741)
T 1yr2_A 362 SKDNLESVGIA 372 (741)
T ss_dssp CSSEEEEEEEE
T ss_pred CCCeEEEEEEE
Confidence 55556677776
No 203
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.35 E-value=1.4e-10 Score=99.82 Aligned_cols=203 Identities=10% Similarity=0.001 Sum_probs=125.8
Q ss_pred eeeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCe-------------EEEEeCCCCcccccccc
Q 023672 34 WPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKT-------------LRIFSLPENGISYDVNA 100 (279)
Q Consensus 34 ~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~-------------i~iwd~~~~~~~~~~~~ 100 (279)
..+++||+.+++.+.. ..+... ....++|+|||+.|+.++.|.. |++|++.++.....
T Consensus 147 ~~i~v~dl~tg~~~~~----~~~~~~--~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~--- 217 (695)
T 2bkl_A 147 AVLHVIDVDSGEWSKV----DVIEGG--KYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDT--- 217 (695)
T ss_dssp CEEEEEETTTCCBCSS----CCBSCC--TTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCE---
T ss_pred EEEEEEECCCCCCcCC----cccCcc--cccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhce---
Confidence 4677888887775410 011111 1267899999999999988776 99999986542100
Q ss_pred ccccCCCCcccceeeec--CCCceEEEEeeCcccccCCCCcEEEEecCCC----cEEEEECCCCeeeEEEeccCcccccc
Q 023672 101 CSLAKDQDSYEASLVVT--EGESVYDFCWFPHMSASDPTSCVFASTTRDH----PIHLWDATTGLLRCTYRAYDAVDEIT 174 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~ 174 (279)
.+... +...+..+.| +|+|++|+.++.++ .|.+|+..+++... +..+..
T Consensus 218 ------------lv~~~~~~~~~~~~~~~-------SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~-l~~~~~----- 272 (695)
T 2bkl_A 218 ------------VVHERTGDPTTFLQSDL-------SRDGKYLFVYILRGWSENDVYWKRPGEKDFRL-LVKGVG----- 272 (695)
T ss_dssp ------------EEECCCCCTTCEEEEEE-------CTTSCCEEEEEEETTTEEEEEEECTTCSSCEE-EEECSS-----
T ss_pred ------------EEEecCCCCEEEEEEEE-------CCCCCEEEEEEeCCCCceEEEEEcCCCCceEE-eecCCC-----
Confidence 01111 2234555655 88999988877665 67777766665433 333332
Q ss_pred ceeeEEECCCCCEEEEec----CCeEEEEEccCCCCceeeeeecccccCCC-CCceEEEEEccCCCcEEEEEeCCCcEEE
Q 023672 175 AAFSVAFNPTGTKIFAGY----NKSVRVFDVHRPGRDFEKYSTLKGNKEGQ-AGIMSAIAFSPTHTGMLAIGSYSQTSAI 249 (279)
Q Consensus 175 ~v~~~~~~~~~~~l~~~~----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~-~~~v~~~~~sp~~~~~l~~~~~dg~i~~ 249 (279)
.+....+ +++.+++.+. ++.|.+||+.++... ....+. ..+ ...+..++|+ ++.++++...|+..+|
T Consensus 273 ~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~~~--~~~~l~---~~~~~~~l~~~~~~--~~~lv~~~~~dg~~~l 344 (695)
T 2bkl_A 273 AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPARA--SWKEIV---PEDSSASLLSVSIV--GGHLSLEYLKDATSEV 344 (695)
T ss_dssp CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCSGG--GCEEEE---CCCSSCEEEEEEEE--TTEEEEEEEETTEEEE
T ss_pred ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCCcc--CCeEEe---cCCCCCeEEEEEEE--CCEEEEEEEECCEEEE
Confidence 3445556 5666444432 578999999763210 011111 122 4457778887 4678899999999888
Q ss_pred EecC-CCeEEEEEeec-CCCEEEEEEccCCC
Q 023672 250 YRED-NMELLYVLHGQ-EGGVTHVSKLSSAY 278 (279)
Q Consensus 250 wd~~-~~~~~~~~~~~-~~~v~~~~~spdg~ 278 (279)
|.+. +++.+..+..+ .+.+.+++++|||.
T Consensus 345 ~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~ 375 (695)
T 2bkl_A 345 RVATLKGKPVRTVQLPGVGAASNLMGLEDLD 375 (695)
T ss_dssp EEEETTCCEEEECCCSSSSEECCCBSCTTCS
T ss_pred EEEeCCCCeeEEecCCCCeEEEEeecCCCCC
Confidence 8665 46666666655 56677888888874
No 204
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.34 E-value=2.6e-10 Score=91.34 Aligned_cols=215 Identities=11% Similarity=0.047 Sum_probs=123.3
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEee----------CCCeEEEEeCCCCcccccccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLA 104 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~~ 104 (279)
.+.++|..+.+.... +..-..+ .++++||+++|+++. .++.|.++|..+.+....
T Consensus 100 ~VsVID~~t~~vv~~------I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~------- 164 (426)
T 3c75_H 100 QQFVIDGSTGRILGM------TDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIAD------- 164 (426)
T ss_dssp EEEEEETTTTEEEEE------EEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEE-------
T ss_pred eEEEEECCCCEEEEE------EECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEE-------
Confidence 355666666665542 2212233 799999999888776 467899999987654222
Q ss_pred CCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecC--CCcEEEEECCCCeeeEEEeccCccc--cccceeeEE
Q 023672 105 KDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR--DHPIHLWDATTGLLRCTYRAYDAVD--EITAAFSVA 180 (279)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~--d~~i~i~d~~~~~~~~~~~~~~~~~--~~~~v~~~~ 180 (279)
+........ ...-.|..++++|++++++++.. ++.|.+.|+.+++.+..+....... ....-..+.
T Consensus 165 ---------I~v~g~~r~-~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~ 234 (426)
T 3c75_H 165 ---------IELPDAPRF-LVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYM 234 (426)
T ss_dssp ---------EEETTCCCC-CBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEE
T ss_pred ---------EECCCcccc-ccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEE
Confidence 111100000 00123666788999999998864 5789999999998887776532100 000000122
Q ss_pred -------------------------------------ECCCCCEEE-EecCCeEEEEEccCCCCceeeeeeccc---c--
Q 023672 181 -------------------------------------FNPTGTKIF-AGYNKSVRVFDVHRPGRDFEKYSTLKG---N-- 217 (279)
Q Consensus 181 -------------------------------------~~~~~~~l~-~~~d~~i~~~d~~~~~~~~~~~~~~~~---~-- 217 (279)
|.+++..++ +...+.+.+.|+.... ......+.. .
T Consensus 235 ~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~--~~v~~~~~~~~~~~i 312 (426)
T 3c75_H 235 NCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEG--ATFRAPIEALTEAER 312 (426)
T ss_dssp EETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSC--EEECCCEESSCTTTG
T ss_pred EcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCc--eEEeeeeeecccccc
Confidence 344443333 3344556666664321 000000000 0
Q ss_pred -cCCCCCceEEEEEccCCCcEEEEEeC----------CCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 218 -KEGQAGIMSAIAFSPTHTGMLAIGSY----------SQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 218 -~~~~~~~v~~~~~sp~~~~~l~~~~~----------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
..........++++| ++..++.... ++.|.++|+.+.+.+.++.... ...+++|+|||+
T Consensus 313 ~~g~~p~g~~~va~s~-dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~-~P~gia~spDg~ 382 (426)
T 3c75_H 313 ADDWRPGGWQQTAYHR-QSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGH-EIDSINVSQDAE 382 (426)
T ss_dssp GGTEEECSSSCEEEEG-GGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEE-EECEEEECCSSS
T ss_pred ccccccCCceeeEEcC-CCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCC-CcCeEEEccCCC
Confidence 000011222368999 6555554432 3579999999999999887533 578999999997
No 205
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.33 E-value=5.5e-10 Score=89.87 Aligned_cols=185 Identities=11% Similarity=0.079 Sum_probs=117.4
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (279)
.....|+|+++++++++...++.|++||..++.... +. .... .|. ++++++++.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~-----------------~~-~~~~-------~~~-ia~~~~g~~ 184 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTT-----------------VH-PGFK-------GGK-PAVTKDKQR 184 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEE-----------------EE-ETCC-------BCB-CEECTTSSE
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEE-----------------ee-ccCC-------CCc-eeEecCCCc
Confidence 467899999999977777778999999998654311 11 1111 122 455889998
Q ss_pred EEEecCCC--cEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccc
Q 023672 141 FASTTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (279)
Q Consensus 141 l~s~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~ 217 (279)
|+++..++ .|.+++...+.....+..... .....+.+++++|++..|+.+ .++.|+.||..+.. .........
T Consensus 185 l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~-~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~--~~~~~~~~~- 260 (409)
T 3hrp_A 185 VYSIGWEGTHTVYVYMKASGWAPTRIGQLGS-TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE--VTLIKQLEL- 260 (409)
T ss_dssp EEEEBSSTTCEEEEEEGGGTTCEEEEEECCT-TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC--EEEEEECCC-
T ss_pred EEEEecCCCceEEEEEcCCCceeEEeeeccc-hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC--EEEEecccc-
Confidence 88888766 788888876654333310000 011266789999954444434 78899999998632 111111100
Q ss_pred cCCCCCce--EEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC---------------CCEEEEEEccCCC
Q 023672 218 KEGQAGIM--SAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE---------------GGVTHVSKLSSAY 278 (279)
Q Consensus 218 ~~~~~~~v--~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~---------------~~v~~~~~spdg~ 278 (279)
.++...- ..++|+|+++.++++-..++.|+.|+.... +..+.++. ....+++|+|+|+
T Consensus 261 -~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~ 335 (409)
T 3hrp_A 261 -SGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGN 335 (409)
T ss_dssp -CSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC
T ss_pred -cCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC
Confidence 1222222 389999955777777788889999997543 33444432 3478999999985
No 206
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.32 E-value=5.4e-10 Score=86.39 Aligned_cols=182 Identities=8% Similarity=0.053 Sum_probs=114.5
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
+...+.+++++++|+++++...++.|.+|+.. +..... .....+.. .-.|..++++++|
T Consensus 84 ~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~----------------~~~~~~~~----~~~~~~i~~d~dG 142 (305)
T 3dr2_A 84 ATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLL----------------VGRYAGKR----LNSPNDLIVARDG 142 (305)
T ss_dssp SCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE----------------ECEETTEE----CSCCCCEEECTTS
T ss_pred CCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEE----------------EeccCCCc----cCCCCCEEECCCC
Confidence 45678999999999977666666889999875 322100 00000000 0123334568899
Q ss_pred cEEEE----ecC-------------CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC------C
Q 023672 139 CVFAS----TTR-------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN------K 194 (279)
Q Consensus 139 ~~l~s----~~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d------~ 194 (279)
++.++ |.. .+.|..+|..+++..... ... ....++|+|+++.|+.+ .. +
T Consensus 143 ~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~-----~p~gl~~spdg~~lyv~~~~~~~~~~~ 215 (305)
T 3dr2_A 143 AIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLD-----HPNGLAFSPDEQTLYVSQTPEQGHGSV 215 (305)
T ss_dssp CEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EES-----SEEEEEECTTSSEEEEEECCC---CCC
T ss_pred CEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCC-----CCcceEEcCCCCEEEEEecCCcCCCCC
Confidence 88876 332 246778887777654433 111 55789999999977744 43 7
Q ss_pred eEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEc
Q 023672 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKL 274 (279)
Q Consensus 195 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~s 274 (279)
.|.+||+...+ +.....+. ......+..+++++ +|.+.++ +.+| |.+||. +++.+..+..+. .+.+++|+
T Consensus 216 ~i~~~~~~~~~--l~~~~~~~---~~~~~~pdgi~~d~-~G~lwv~-~~~g-v~~~~~-~g~~~~~~~~~~-~~~~~~f~ 285 (305)
T 3dr2_A 216 EITAFAWRDGA--LHDRRHFA---SVPDGLPDGFCVDR-GGWLWSS-SGTG-VCVFDS-DGQLLGHIPTPG-TASNCTFD 285 (305)
T ss_dssp EEEEEEEETTE--EEEEEEEE---CCSSSCCCSEEECT-TSCEEEC-CSSE-EEEECT-TSCEEEEEECSS-CCCEEEEC
T ss_pred EEEEEEecCCC--ccCCeEEE---ECCCCCCCeEEECC-CCCEEEe-cCCc-EEEECC-CCCEEEEEECCC-ceeEEEEe
Confidence 89999997632 21111111 11233456789999 7875554 4444 999997 677777777655 58899999
Q ss_pred cCCC
Q 023672 275 SSAY 278 (279)
Q Consensus 275 pdg~ 278 (279)
|+++
T Consensus 286 ~d~~ 289 (305)
T 3dr2_A 286 QAQQ 289 (305)
T ss_dssp TTSC
T ss_pred CCCC
Confidence 9875
No 207
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.32 E-value=1.3e-10 Score=91.90 Aligned_cols=139 Identities=12% Similarity=0.052 Sum_probs=96.2
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
+.+ |+.|+| |+++|+++ .++.|++||+.+..... ....+...+.++.+. .|
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~~~~l~v~dv~sl~~~~-----------------~~~~~~~~v~~i~~~------~p-- 137 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-TRNALYSLDLEELSEFR-----------------TVTSFEKPVFQLKNV------NN-- 137 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-ESSEEEEEESSSTTCEE-----------------EEEECSSCEEEEEEC------SS--
T ss_pred CCC-eeEEEE--CCCEEEEE-cCCcEEEEEchhhhccC-----------------ccceeecceeeEEec------CC--
Confidence 556 999999 89999998 88999999998643211 111223346666552 22
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeeccc--
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKG-- 216 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~-- 216 (279)
.+++++.||.|.+||+.++.... ... .|.+++|+|+| ..++..||.+++|+.... . .....++..
T Consensus 138 -~~av~~~dG~L~v~dl~~~~~~~----~~~-----~Vs~v~WSpkG-~~vg~~dg~i~~~~~~~~-~-~~~k~~I~~Pp 204 (388)
T 1xip_A 138 -TLVILNSVNDLSALDLRTKSTKQ----LAQ-----NVTSFDVTNSQ-LAVLLKDRSFQSFAWRNG-E-MEKQFEFSLPS 204 (388)
T ss_dssp -EEEEEETTSEEEEEETTTCCEEE----EEE-----SEEEEEECSSE-EEEEETTSCEEEEEEETT-E-EEEEEEECCCH
T ss_pred -CEEEEECCCCEEEEEccCCcccc----ccC-----CceEEEEcCCc-eEEEEcCCcEEEEcCCCc-c-ccccceecCCc
Confidence 28888999999999999877543 122 78999999999 333449999999988763 1 100112211
Q ss_pred cc---CCCCCceEEEEEccCCCcEEEE
Q 023672 217 NK---EGQAGIMSAIAFSPTHTGMLAI 240 (279)
Q Consensus 217 ~~---~~~~~~v~~~~~sp~~~~~l~~ 240 (279)
.. .+|...|.++.|.+ ++.++++
T Consensus 205 ~~~~~~~~~~~V~sI~wl~-~~~flv~ 230 (388)
T 1xip_A 205 ELEELPVEEYSPLSVTILS-PQDFLAV 230 (388)
T ss_dssp HHHTSCTTTSEEEEEEESS-SSEEEEE
T ss_pred ccccccCCCeeEEEEEEec-CCeEEEE
Confidence 11 14678899999999 8888876
No 208
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.32 E-value=1.1e-10 Score=100.32 Aligned_cols=184 Identities=10% Similarity=0.043 Sum_probs=113.7
Q ss_pred CCCCCceEEEEEccCCCeEEE-----eeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcc
Q 023672 57 SIPNNFLKGIKWSPDGSSFLT-----SSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHM 131 (279)
Q Consensus 57 ~~h~~~v~~~~~~~~~~~l~t-----~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 131 (279)
.+|...+..++|||||++||. |+.+..|++||+.+++..... +. ......+
T Consensus 125 ~~~~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~---------------~~---~~k~~~~------ 180 (693)
T 3iuj_A 125 PDGTTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP---------------LK---DVKFSGI------ 180 (693)
T ss_dssp TTSCCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE---------------EE---EEESCCC------
T ss_pred CCCcEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc---------------cC---CceeccE------
Confidence 456678999999999999883 333467999999987532110 00 0001223
Q ss_pred cccCCCCcEEEEecCCC-------------cEEEEECCCCee--eEEEeccCccccccceeeEEECCCCCEEEE-e----
Q 023672 132 SASDPTSCVFASTTRDH-------------PIHLWDATTGLL--RCTYRAYDAVDEITAAFSVAFNPTGTKIFA-G---- 191 (279)
Q Consensus 132 ~~~~~~~~~l~s~~~d~-------------~i~i~d~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~---- 191 (279)
+|+ |++.|+.++.+. .|++|++.++.. ...+..... +...+..+.|+|+|++|+. .
T Consensus 181 -~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~--~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 181 -SWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPA--QHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp -EEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGG--GCCSEEEEEECTTSCEEEEEEESSS
T ss_pred -EEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCC--CCeEEEEEEEcCCCCEEEEEEccCC
Confidence 447 888888887764 399999987653 222322110 1114568899999998863 2
Q ss_pred cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC---CcEEEEecCCCeE--EEEEeecCC
Q 023672 192 YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS---QTSAIYREDNMEL--LYVLHGQEG 266 (279)
Q Consensus 192 ~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d---g~i~~wd~~~~~~--~~~~~~~~~ 266 (279)
.+..|+++|+.++......+ ..+....... ++++++.+++....+ +.|..+|+.++.. ...+..|..
T Consensus 257 ~~~~i~~~d~~~~~~~~~~l-------~~~~~~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~ 328 (693)
T 3iuj_A 257 SGNRLYVKDLSQENAPLLTV-------QGDLDADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQ 328 (693)
T ss_dssp SCCEEEEEETTSTTCCCEEE-------ECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS
T ss_pred CCcEEEEEECCCCCCceEEE-------eCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCC
Confidence 23589999998743233322 2223334444 566366666666554 5799999987754 345665666
Q ss_pred CEEEEEEccCCC
Q 023672 267 GVTHVSKLSSAY 278 (279)
Q Consensus 267 ~v~~~~~spdg~ 278 (279)
.+. .|+|+|+
T Consensus 329 ~~~--~~s~~g~ 338 (693)
T 3iuj_A 329 QVL--TVHSGSG 338 (693)
T ss_dssp SCE--EEEEETT
T ss_pred CEE--EEEEECC
Confidence 555 7888875
No 209
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.26 E-value=1.2e-09 Score=94.80 Aligned_cols=201 Identities=11% Similarity=0.071 Sum_probs=123.3
Q ss_pred eeeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCe--------------EEEEeCCCCccccccc
Q 023672 34 WPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKT--------------LRIFSLPENGISYDVN 99 (279)
Q Consensus 34 ~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~--------------i~iwd~~~~~~~~~~~ 99 (279)
..+++||+.+++.+.. ..+...+..++|+|| +.|+.++.|+. |.+|++.++.....
T Consensus 189 ~~i~v~dl~tg~~~~~-------~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~-- 258 (741)
T 1yr2_A 189 RTVKFVGVADGKPLAD-------ELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQ-- 258 (741)
T ss_dssp EEEEEEETTTCCEEEE-------EEEEEESCCCEESTT-SEEEEEECCCC--------CCCCCEEEEEETTSCGGGCE--
T ss_pred EEEEEEECCCCCCCCc-------cCCCceeccEEEECC-CEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCE--
Confidence 3577888888776431 011112357899999 98988877654 88888875432100
Q ss_pred cccccCCCCcccceeeecCC--CceEEEEeeCcccccCCCCcEEEEecCCC-----cEEEEECCCC--eeeEEEeccCcc
Q 023672 100 ACSLAKDQDSYEASLVVTEG--ESVYDFCWFPHMSASDPTSCVFASTTRDH-----PIHLWDATTG--LLRCTYRAYDAV 170 (279)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~~~--~~v~~~~~~~~~~~~~~~~~~l~s~~~d~-----~i~i~d~~~~--~~~~~~~~~~~~ 170 (279)
.+..... ..+..+.| +|+|++|+..+.++ .|.+||+.++ +....+..+..
T Consensus 259 -------------lv~~~~~~~~~~~~~~~-------SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~- 317 (741)
T 1yr2_A 259 -------------PVFATPELPKRGHGASV-------SSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK- 317 (741)
T ss_dssp -------------EEECCTTCTTCEEEEEE-------CTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS-
T ss_pred -------------EEeccCCCCeEEEEEEE-------CCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC-
Confidence 0111111 23555555 88999888776543 7999999877 31344433332
Q ss_pred ccccceeeEEECCCCCEEE-Eec----CCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC
Q 023672 171 DEITAAFSVAFNPTGTKIF-AGY----NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ 245 (279)
Q Consensus 171 ~~~~~v~~~~~~~~~~~l~-~~~----d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg 245 (279)
.+... ++|+|+.|+ .+. ++.|.+||+.++.... ..+. ..+...+..+.|+ ++.++++...|+
T Consensus 318 ----~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~---~~l~---~~~~~~l~~~~~~--~~~lv~~~~~dg 384 (741)
T 1yr2_A 318 ----AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRF---DTVV---PESKDNLESVGIA--GNRLFASYIHDA 384 (741)
T ss_dssp ----SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEE---EEEE---CCCSSEEEEEEEE--BTEEEEEEEETT
T ss_pred ----ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCcccc---EEEe---cCCCCeEEEEEEE--CCEEEEEEEECC
Confidence 33333 348888777 433 4569999987631111 1221 2334456677776 457888888999
Q ss_pred cEEEEecC-CCeEEEEEeec-CCCEEEEEEccCCC
Q 023672 246 TSAIYRED-NMELLYVLHGQ-EGGVTHVSKLSSAY 278 (279)
Q Consensus 246 ~i~~wd~~-~~~~~~~~~~~-~~~v~~~~~spdg~ 278 (279)
..+||.+. +++.+..+..+ .+.+..++++|||+
T Consensus 385 ~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~ 419 (741)
T 1yr2_A 385 KSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDR 419 (741)
T ss_dssp EEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCS
T ss_pred EEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCC
Confidence 87777654 46666666653 56788999999885
No 210
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.25 E-value=9.4e-09 Score=79.10 Aligned_cols=180 Identities=10% Similarity=0.045 Sum_probs=111.8
Q ss_pred CceEEEEEccCC-CeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 61 NFLKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
..-.+..|+|++ .++++...++.|..||..++... .......+..+.+ +++++
T Consensus 13 ~~~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~-------------------~~~~~~~~~~i~~-------~~dG~ 66 (297)
T 3g4e_A 13 RCGESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQ-------------------RVTMDAPVSSVAL-------RQSGG 66 (297)
T ss_dssp SBEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEE-------------------EEECSSCEEEEEE-------BTTSS
T ss_pred ccccCCeEECCCCEEEEEECCCCEEEEEECCCCcEE-------------------EEeCCCceEEEEE-------CCCCC
Confidence 345688999955 45566777899999999865321 1112345555554 77888
Q ss_pred EEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC---------CeEEEEEccCCCCcee
Q 023672 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN---------KSVRVFDVHRPGRDFE 209 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d---------~~i~~~d~~~~~~~~~ 209 (279)
++++. ++.|.+||..+++.......... .....+..++++|+|+++++. .. ....||.+...+....
T Consensus 67 l~v~~--~~~l~~~d~~~g~~~~~~~~~~~-~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~ 143 (297)
T 3g4e_A 67 YVATI--GTKFCALNWKEQSAVVLATVDND-KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK 143 (297)
T ss_dssp EEEEE--TTEEEEEETTTTEEEEEEECCTT-CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE
T ss_pred EEEEE--CCeEEEEECCCCcEEEEEecCCC-CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEE
Confidence 55543 56799999988875443332211 112257889999999977754 22 3345666654222111
Q ss_pred eeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEec--CCCeEE-----EEEeecCCCEEEEEEccCCC
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYRE--DNMELL-----YVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~--~~~~~~-----~~~~~~~~~v~~~~~spdg~ 278 (279)
.. ........++|+| ++. ++++.+.++.|.+||+ .++... ..+..+.+.+.++++.++|+
T Consensus 144 ~~--------~~~~~pngi~~sp-dg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~ 211 (297)
T 3g4e_A 144 YF--------DQVDISNGLDWSL-DHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK 211 (297)
T ss_dssp EE--------EEESBEEEEEECT-TSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC
T ss_pred Ee--------eccccccceEEcC-CCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC
Confidence 11 1123467899999 665 5566677889999987 455432 22233345678899998885
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.25 E-value=2.6e-08 Score=76.33 Aligned_cols=180 Identities=11% Similarity=0.101 Sum_probs=120.1
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeee-cCCCceEEEEeeCcccccCCC
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVV-TEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 137 (279)
+...+.+++++++++++++...++.|..||.. +.... ... .....+..+ +++++
T Consensus 60 ~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~-----------------~~~~~~~~~~~~i-------~~~~~ 114 (300)
T 2qc5_A 60 PDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTE-----------------YPLPQPDSGPYGI-------TEGLN 114 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-----------------EECSSTTCCEEEE-------EECST
T ss_pred CCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEE-----------------ecCCCCCCCCccc-------eECCC
Confidence 44678999999999877777668899999987 43210 000 012234444 44778
Q ss_pred CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeeccc
Q 023672 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~ 216 (279)
+.++++...++.|..+|.. ++... +.... ....+.++++.++++++++. .++.|..||. + +... .. ..
T Consensus 115 g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~---~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~-g~~~-~~-~~-- 183 (300)
T 2qc5_A 115 GDIWFTQLNGDRIGKLTAD-GTIYE-YDLPN---KGSYPAFITLGSDNALWFTENQNNSIGRITN-T-GKLE-EY-PL-- 183 (300)
T ss_dssp TCEEEEETTTTEEEEECTT-SCEEE-EECSS---TTCCEEEEEECTTSSEEEEETTTTEEEEECT-T-CCEE-EE-EC--
T ss_pred CCEEEEccCCCeEEEECCC-CCEEE-ccCCC---CCCCceeEEECCCCCEEEEecCCCeEEEECC-C-CcEE-Ee-eC--
Confidence 8888877778899999987 55442 22221 11267899999999966666 5789999998 3 2211 11 11
Q ss_pred ccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEE-EeecCCCEEEEEEccCCC
Q 023672 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV-LHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 217 ~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~spdg~ 278 (279)
..+...+..+++++ ++.++++....+.|.+||. +++.... +..+...+.++++.++|+
T Consensus 184 --~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~ 242 (300)
T 2qc5_A 184 --PTNAAAPVGITSGN-DGALWFVEIMGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSE 242 (300)
T ss_dssp --SSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTC
T ss_pred --CCCCCCcceEEECC-CCCEEEEccCCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCC
Confidence 23345688999999 7888777777778999998 5554332 233445789999999885
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.23 E-value=7.6e-09 Score=83.24 Aligned_cols=187 Identities=7% Similarity=-0.043 Sum_probs=112.5
Q ss_pred EEEccCCCeEEEeeCCC--eEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEE
Q 023672 66 IKWSPDGSSFLTSSEDK--TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAS 143 (279)
Q Consensus 66 ~~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s 143 (279)
++|+++++.|+++..++ .|.+|+..++........ ....... .|..++++|++..|+.
T Consensus 176 ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~-------------~~~~~~~-------~p~~iav~p~~g~lyv 235 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQ-------------LGSTFSG-------KIGAVALDETEEWLYF 235 (409)
T ss_dssp CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEE-------------CCTTSCS-------CCCBCEECTTSSEEEE
T ss_pred eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeee-------------ccchhcC-------CcEEEEEeCCCCeEEE
Confidence 89999999988888766 788888764321000000 0000111 2344566884445555
Q ss_pred ecCCCcEEEEECCCCeeeEEEeccCcccccc-cee-eEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeecc---c
Q 023672 144 TTRDHPIHLWDATTGLLRCTYRAYDAVDEIT-AAF-SVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLK---G 216 (279)
Q Consensus 144 ~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~-~v~-~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~---~ 216 (279)
+..++.|..||..++... .+......+... ... .++|+|++..|+ +. .++.|+.|+.... ...+.... .
T Consensus 236 ~d~~~~I~~~d~~~~~~~-~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g~---~~~~~g~~~~~g 311 (409)
T 3hrp_A 236 VDSNKNFGRFNVKTQEVT-LIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDGE---CEWFCGSATQKT 311 (409)
T ss_dssp ECTTCEEEEEETTTCCEE-EEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTCC---EEEEEECTTCCS
T ss_pred EECCCcEEEEECCCCCEE-EEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCCC---EEEEEeCCCCCC
Confidence 777889999999877532 221110000100 123 899999644444 55 7889999987642 11110000 0
Q ss_pred cc-----CCCCCceEEEEEccCCCcEEEEEe-CCCcEEEEecCCCeEEEEEeec---------------CCCEEEEEEcc
Q 023672 217 NK-----EGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYREDNMELLYVLHGQ---------------EGGVTHVSKLS 275 (279)
Q Consensus 217 ~~-----~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~~wd~~~~~~~~~~~~~---------------~~~v~~~~~sp 275 (279)
.. ...-.....++++| ++.++++-. .++.|+.||+.++.. ..+.++ -..+.+++++|
T Consensus 312 ~~dg~~~~~~~~~P~gia~d~-dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g~~~~~~~~~P~giavd~ 389 (409)
T 3hrp_A 312 VQDGLREEALFAQPNGMTVDE-DGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDGTPLEATFNYPYDICYDG 389 (409)
T ss_dssp CBCEEGGGCBCSSEEEEEECT-TCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCBSTTTCCBSSEEEEEECS
T ss_pred cCCCcccccEeCCCeEEEEeC-CCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCCChhceEeCCceEEEEcC
Confidence 00 01123478999999 788888877 889999999888764 445444 13589999999
Q ss_pred CCC
Q 023672 276 SAY 278 (279)
Q Consensus 276 dg~ 278 (279)
+|.
T Consensus 390 ~g~ 392 (409)
T 3hrp_A 390 EGG 392 (409)
T ss_dssp SSE
T ss_pred CCC
Confidence 874
No 213
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.21 E-value=7e-10 Score=87.42 Aligned_cols=212 Identities=10% Similarity=-0.055 Sum_probs=113.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEee----------CCCeEEEEeCCCCcccccccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSS----------EDKTLRIFSLPENGISYDVNACSLA 104 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~~~~~ 104 (279)
.+.++|..+.+.+.. ...+. .+ .+.++||+++++++. .+++|.+||+.+++....
T Consensus 47 ~vsvID~~t~~v~~~-----i~vG~-~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~------- 111 (368)
T 1mda_H 47 ENWVSCAGCGVTLGH-----SLGAF-LS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD------- 111 (368)
T ss_dssp EEEEEETTTTEEEEE-----EEECT-TC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE-------
T ss_pred eEEEEECCCCeEEEE-----EeCCC-CC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE-------
Confidence 455777777776652 22222 34 799999999998876 478999999998754322
Q ss_pred CCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecC--CCcEEE--EECCCCeeeEEEeccCcc--ccccceee
Q 023672 105 KDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTR--DHPIHL--WDATTGLLRCTYRAYDAV--DEITAAFS 178 (279)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~--d~~i~i--~d~~~~~~~~~~~~~~~~--~~~~~v~~ 178 (279)
+........ ...-.|..++++|||++++++.. +..|.+ +|+.+ +..+...... .....-.-
T Consensus 112 ---------I~v~~~~~~-~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~ 178 (368)
T 1mda_H 112 ---------IELPDAPRF-SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATH 178 (368)
T ss_dssp ---------EEETTSCSC-CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEE
T ss_pred ---------EECCCcccc-ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEE
Confidence 111100000 00023666788999999888864 356888 88866 3333221100 00000000
Q ss_pred EEECCC-------------------------------------CC-EEEEecCCeEEEEEccCCCCceeeeeecccc---
Q 023672 179 VAFNPT-------------------------------------GT-KIFAGYNKSVRVFDVHRPGRDFEKYSTLKGN--- 217 (279)
Q Consensus 179 ~~~~~~-------------------------------------~~-~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~--- 217 (279)
+.++++ +. +++++. +.+.+.|+...... ....+...
T Consensus 179 ~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~-~~V~viD~~~~~~~--v~~~~~~~~~~ 255 (368)
T 1mda_H 179 YLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVA-SSILQGDIPAAGAT--MKAAIDGNESG 255 (368)
T ss_dssp ECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBS-SCCEEEECCSSCCE--EECCCCSSCTH
T ss_pred EEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcC-CEEEEEECCCCcce--EEEEEEecccc
Confidence 111122 22 222333 55666666431111 11111000
Q ss_pred ---cCCCCCceEEEEEccCCCcEEEEEeC---------CCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 218 ---KEGQAGIMSAIAFSPTHTGMLAIGSY---------SQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 218 ---~~~~~~~v~~~~~sp~~~~~l~~~~~---------dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
..........++++| ++..++.+.. ++.+.++|+.+++.+..+.... ...+|+|+|||++
T Consensus 256 ~~~~~~~p~g~~~v~~s~-dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~ 327 (368)
T 1mda_H 256 RKADNFRSAGFQMVAKLK-NTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGAS 327 (368)
T ss_dssp HHHTTEEECSSSCEEEET-TTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSC
T ss_pred ccccccccCcceeeEEcC-CCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCE
Confidence 000011122268999 6555554322 2346699999999988887544 5789999999974
No 214
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.21 E-value=2.2e-09 Score=84.36 Aligned_cols=200 Identities=13% Similarity=0.113 Sum_probs=117.9
Q ss_pred CCCCceEEEEEccCCCeEEEeeC-----CCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccc
Q 023672 58 IPNNFLKGIKWSPDGSSFLTSSE-----DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~t~~~-----dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (279)
+|-..+.+++++++++++++-.. ++.|.+||+.+++.......... . ......+..+.
T Consensus 64 ~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~----------~-~~~~~~~~~v~------ 126 (343)
T 2qe8_A 64 ITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPP----------I-TLSNSFVNDLA------ 126 (343)
T ss_dssp CCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTT----------T-SCTTCCCCEEE------
T ss_pred cceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChh----------h-cccccccceEE------
Confidence 45678999999999886665433 57899999987653221110000 0 01112234443
Q ss_pred ccCCC-CcEEEEec---CCCcEEEEECCCCeeeEEEeccCcc----------c--------------cccceeeEEECCC
Q 023672 133 ASDPT-SCVFASTT---RDHPIHLWDATTGLLRCTYRAYDAV----------D--------------EITAAFSVAFNPT 184 (279)
Q Consensus 133 ~~~~~-~~~l~s~~---~d~~i~i~d~~~~~~~~~~~~~~~~----------~--------------~~~~v~~~~~~~~ 184 (279)
++++ +..+++-. .++.|.+||+.+++....+..+... + ....+..|+|+|+
T Consensus 127 -vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~d 205 (343)
T 2qe8_A 127 -VDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAE 205 (343)
T ss_dssp -EETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTT
T ss_pred -EecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccC
Confidence 3554 33444444 5788999999988766655321100 0 0013578999999
Q ss_pred CCEEEEe-c-CCeEEEEEccC--CCCc--eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEE
Q 023672 185 GTKIFAG-Y-NKSVRVFDVHR--PGRD--FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELL 258 (279)
Q Consensus 185 ~~~l~~~-~-d~~i~~~d~~~--~~~~--~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~ 258 (279)
++.|+.+ . ...+..++... .+.. .+....+. ..++......+++++ ++.++++...++.|.+||..+++..
T Consensus 206 g~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~g~~g~pdgia~d~-~G~l~va~~~~~~V~~~d~~~G~~~ 282 (343)
T 2qe8_A 206 NEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIE--RYSEKPICDGISIDK-DHNIYVGDLAHSAIGVITSADRAYK 282 (343)
T ss_dssp SCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCE--EEEECCSCSCEEECT-TCCEEEEEGGGTEEEEEETTTTEEE
T ss_pred CCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceE--ecccCCCCceEEECC-CCCEEEEccCCCeEEEEECCCCCEE
Confidence 9888854 3 34555555421 0000 00000000 012233566799999 8899999988999999998667644
Q ss_pred EEEeec-CCCEEEEEEccCCC
Q 023672 259 YVLHGQ-EGGVTHVSKLSSAY 278 (279)
Q Consensus 259 ~~~~~~-~~~v~~~~~spdg~ 278 (279)
...... ...+.+++|.++|+
T Consensus 283 ~~~~~~~~~~p~~va~~~~g~ 303 (343)
T 2qe8_A 283 LLVTDEKLSWTDSFNFGSDGY 303 (343)
T ss_dssp EEEECGGGSCEEEEEECTTSC
T ss_pred EEEECCceecCCeeEECCCCc
Confidence 333322 45689999999885
No 215
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.20 E-value=8.3e-09 Score=79.84 Aligned_cols=184 Identities=11% Similarity=0.091 Sum_probs=110.5
Q ss_pred CceEEEEEccCCCeEEE-------eeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 61 NFLKGIKWSPDGSSFLT-------SSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t-------~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
....+++|+++++++++ +..++.|.+||..+++...... . ........+..+.
T Consensus 18 ~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~-----~--------~~~~~~~~~~~i~------- 77 (314)
T 1pjx_A 18 PGAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICK-----P--------EVNGYGGIPAGCQ------- 77 (314)
T ss_dssp TTCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEEC-----C--------EETTEECCEEEEE-------
T ss_pred CCccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEe-----c--------ccCCCCCCCceEE-------
Confidence 34689999999988777 6778999999987654311000 0 0000112344454
Q ss_pred cCCC-CcEEEEecCCCcEEEEECCCCeeeEE-EeccCccccccceeeEEECCCCCEEEEe-cC---------------Ce
Q 023672 134 SDPT-SCVFASTTRDHPIHLWDATTGLLRCT-YRAYDAVDEITAAFSVAFNPTGTKIFAG-YN---------------KS 195 (279)
Q Consensus 134 ~~~~-~~~l~s~~~d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d---------------~~ 195 (279)
++++ ++++++.. .+.|.+||.. ++.... ...... .....+.+++++++|+++++. .+ +.
T Consensus 78 ~~~~~g~l~v~~~-~~~l~~~d~~-g~~~~~~~~~~~~-~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~ 154 (314)
T 1pjx_A 78 CDRDANQLFVADM-RLGLLVVQTD-GTFEEIAKKDSEG-RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGS 154 (314)
T ss_dssp ECSSSSEEEEEET-TTEEEEEETT-SCEEECCSBCTTS-CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEE
T ss_pred EecCCCcEEEEEC-CCCEEEEeCC-CCEEEEEeccCCC-ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCe
Confidence 4777 66555544 4478899988 664332 211111 111257899999999888765 44 45
Q ss_pred EEEEEccCCCCceeeeeecccccCCCCCceEEEEEc----cCCCcE-EEEEeCCCcEEEEecC-CCeE-----EEEEeec
Q 023672 196 VRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFS----PTHTGM-LAIGSYSQTSAIYRED-NMEL-----LYVLHGQ 264 (279)
Q Consensus 196 i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----p~~~~~-l~~~~~dg~i~~wd~~-~~~~-----~~~~~~~ 264 (279)
|..||.. +. .... . .+......++|+ | ++.. +++...++.|.+||+. +++. ...+..+
T Consensus 155 l~~~~~~--g~-~~~~--~-----~~~~~~~~i~~~~~~d~-dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 155 IYCFTTD--GQ-MIQV--D-----TAFQFPNGIAVRHMNDG-RPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp EEEECTT--SC-EEEE--E-----EEESSEEEEEEEECTTS-CEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred EEEECCC--CC-EEEe--c-----cCCCCcceEEEecccCC-CCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC
Confidence 6666654 21 1111 1 112346789999 9 7754 5555668899999986 4542 2233333
Q ss_pred C-CCEEEEEEccCCC
Q 023672 265 E-GGVTHVSKLSSAY 278 (279)
Q Consensus 265 ~-~~v~~~~~spdg~ 278 (279)
. ..+.+++++++|+
T Consensus 224 ~~~~p~~i~~d~~G~ 238 (314)
T 1pjx_A 224 HEGGADGMDFDEDNN 238 (314)
T ss_dssp SSCEEEEEEEBTTCC
T ss_pred CCCCCCceEECCCCC
Confidence 3 5678899999885
No 216
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.19 E-value=4.1e-08 Score=75.23 Aligned_cols=180 Identities=12% Similarity=0.127 Sum_probs=120.8
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeee-cCCCceEEEEeeCcccccCCC
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVV-TEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~ 137 (279)
....+.+++++++|+.+++...++.|.+||.. +.... +.. .....+..+. ++++
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~-----------------~~~~~~~~~~~~i~-------~~~~ 72 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKE-----------------FEVPTPDAKVMCLI-------VSSL 72 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEE-----------------EECSSTTCCEEEEE-------ECTT
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEE-----------------EECCCCCCcceeEE-------ECCC
Confidence 44578999999999988777778999999987 43211 000 1112344444 4778
Q ss_pred CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeeccc
Q 023672 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~ 216 (279)
+.++++...++.|..+|.. ++.. .+..... ...+.++++.++++++++. .++.|..||.. + .. ... ..
T Consensus 73 g~l~v~~~~~~~v~~~d~~-g~~~-~~~~~~~---~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g-~~-~~~-~~-- 141 (300)
T 2qc5_A 73 GDIWFTENGANKIGKLSKK-GGFT-EYPLPQP---DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-G-TI-YEY-DL-- 141 (300)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEE-EEECSST---TCCEEEEEECSTTCEEEEETTTTEEEEECTT-S-CE-EEE-EC--
T ss_pred CCEEEEecCCCeEEEECCC-CCeE-EecCCCC---CCCCccceECCCCCEEEEccCCCeEEEECCC-C-CE-EEc-cC--
Confidence 8877777778889999987 5543 3322211 1267899999999888776 57899999886 2 11 111 11
Q ss_pred ccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEE-EeecCCCEEEEEEccCCC
Q 023672 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV-LHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 217 ~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~-~~~~~~~v~~~~~spdg~ 278 (279)
......+.++++++ ++.++++...++.|..+|. +++.... +..+...+.++++.++|+
T Consensus 142 --~~~~~~~~~i~~d~-~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~ 200 (300)
T 2qc5_A 142 --PNKGSYPAFITLGS-DNALWFTENQNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGA 200 (300)
T ss_dssp --SSTTCCEEEEEECT-TSSEEEEETTTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSS
T ss_pred --CCCCCCceeEEECC-CCCEEEEecCCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCC
Confidence 22345688999999 7887777766788999998 5654432 222345688999999885
No 217
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=99.19 E-value=1.6e-09 Score=89.10 Aligned_cols=123 Identities=11% Similarity=0.001 Sum_probs=81.3
Q ss_pred cEEEEECCC--Cee-eEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCc----eeeeeecccccC
Q 023672 149 PIHLWDATT--GLL-RCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRD----FEKYSTLKGNKE 219 (279)
Q Consensus 149 ~i~i~d~~~--~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~----~~~~~~~~~~~~ 219 (279)
.|.+.|.++ ++. +..+.... ...++.++|||++++ ++ .+..|.++|+.+.... +......... -
T Consensus 255 ~V~VID~~~~~~~~~~~~Ipvg~------~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~-v 327 (595)
T 1fwx_A 255 GVKVVDGRKEASSLFTRYIPIAN------NPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAE-P 327 (595)
T ss_dssp TEEEEECSGGGCCSSEEEEEEES------SCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEEC-C
T ss_pred cEEEEeCcccCCceeEEEEecCC------CceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEE-c
Confidence 488888887 444 45555443 567899999999988 45 8899999999852100 0000001001 1
Q ss_pred CCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCC----------CeEEEEEeecCCCE-----EEEEEccCCCC
Q 023672 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN----------MELLYVLHGQEGGV-----THVSKLSSAYT 279 (279)
Q Consensus 220 ~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~----------~~~~~~~~~~~~~v-----~~~~~spdg~~ 279 (279)
.-......++|+| +|...++.-.|+.|.+||+.+ .+.+.++..|-.+- .++.++|||+|
T Consensus 328 ~vG~gP~h~aF~~-dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~ 401 (595)
T 1fwx_A 328 ELGLGPLHTAFDG-RGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDW 401 (595)
T ss_dssp BCCSCEEEEEECT-TSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSE
T ss_pred CCCCCcceEEECC-CCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCE
Confidence 1134578899999 776666777899999999987 56777887664431 22356788875
No 218
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.17 E-value=3.4e-11 Score=95.64 Aligned_cols=191 Identities=10% Similarity=0.049 Sum_probs=95.7
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.++.||..+++....+.. +.+.+..+..++..+++++.||.|..||..+++........
T Consensus 20 ~v~a~d~~tG~~~W~~~~--------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~------------- 78 (369)
T 2hz6_A 20 SLHAVSKRTGSIKWTLKE--------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFT------------- 78 (369)
T ss_dssp EEEEEETTTCCEEEEEEC--------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCC-------------
T ss_pred EEEEEECCCCCEEEEecC--------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeecc-------------
Confidence 477889999887753321 23444555567878888889999999999876542211000
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
....+ ...| .+. .+..+++++.++.|..||..+|+.+..+..+. ...++|++..++++ .+
T Consensus 79 ---~~~~~---~~sp---~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~---------~~~~~p~~~~v~~~~~d 139 (369)
T 2hz6_A 79 ---IPELV---QASP---CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF---------ADSLSPSTSLLYLGRTE 139 (369)
T ss_dssp ---HHHHH---TTCS---CC------CCCCEEEEEEEEECCC-------------------------------EEEEEEE
T ss_pred ---Ccccc---ccCc---eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC---------cccccccCCEEEEEecC
Confidence 00000 0001 111 34467778889999999999999887776543 13445677777755 89
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCC---cEEEEEeCCCcEEEEecCCCeEEEEEeecCCCE-E
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHT---GMLAIGSYSQTSAIYREDNMELLYVLHGQEGGV-T 269 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~---~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v-~ 269 (279)
+.|+.||.+++....... . .. .....+++ +. ..+++++.||.|+.||.++++.+..... ..++ .
T Consensus 140 g~v~a~d~~tG~~~W~~~--~----~~----~~~~~~~~-~~~~~~~v~~~~~dg~v~a~d~~tG~~~W~~~~-~~pv~~ 207 (369)
T 2hz6_A 140 YTITMYDTKTRELRWNAT--Y----FD----YAASLPED-DVDYKMSHFVSNGDGLVVTVDSESGDVLWIQNY-ASPVVA 207 (369)
T ss_dssp EEEECCCSSSSSCCCEEE--E----EE----ECCBCCCC-CTTCCCCEEEEETSCEEEEECTTTCCEEEEEEC-SSCEEE
T ss_pred CEEEEEECCCCCEEEeEe--c----cc----ccCccccC-CccccceEEEECCCCEEEEEECCCCcEEEEecC-CCceEE
Confidence 999999999853222211 0 01 11122333 21 4567788899999999999998877763 3444 3
Q ss_pred EEEEccCC
Q 023672 270 HVSKLSSA 277 (279)
Q Consensus 270 ~~~~spdg 277 (279)
...+++||
T Consensus 208 ~~~~~~dg 215 (369)
T 2hz6_A 208 FYVWQREG 215 (369)
T ss_dssp EEECTTSS
T ss_pred EEEecCCc
Confidence 45566666
No 219
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.15 E-value=1.4e-08 Score=79.14 Aligned_cols=176 Identities=15% Similarity=0.117 Sum_probs=107.0
Q ss_pred ceEEEEEccCCC-eEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE
Q 023672 62 FLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (279)
Q Consensus 62 ~v~~~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (279)
...+..|+|++. ++++...++.|..||..++... .......+..+.| ++++++
T Consensus 50 ~~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~-------------------~~~~~~~v~~i~~-------~~dg~l 103 (326)
T 2ghs_A 50 LGEGPTFDPASGTAWWFNILERELHELHLASGRKT-------------------VHALPFMGSALAK-------ISDSKQ 103 (326)
T ss_dssp BEEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEE-------------------EEECSSCEEEEEE-------EETTEE
T ss_pred CCcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEE-------------------EEECCCcceEEEE-------eCCCeE
Confidence 356789999754 5566667889999998865321 1111235666665 567877
Q ss_pred EEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC------CeEEEEEccCCCCceeeeee
Q 023672 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN------KSVRVFDVHRPGRDFEKYST 213 (279)
Q Consensus 141 l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d------~~i~~~d~~~~~~~~~~~~~ 213 (279)
+++. .+ .|.+||..+++.......... .....+..+.++|+|+++++. .+ +.|..++ + +. ...+
T Consensus 104 ~v~~-~~-gl~~~d~~~g~~~~~~~~~~~-~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~-g~-~~~~-- 174 (326)
T 2ghs_A 104 LIAS-DD-GLFLRDTATGVLTLHAELESD-LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K-GK-VTKL-- 174 (326)
T ss_dssp EEEE-TT-EEEEEETTTCCEEEEECSSTT-CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T-TE-EEEE--
T ss_pred EEEE-CC-CEEEEECCCCcEEEEeeCCCC-CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C-Cc-EEEe--
Confidence 7654 34 499999988875433222111 111267899999999977754 21 3455555 3 22 1111
Q ss_pred cccccCCCCCceEEEEEccCCCcEE-EEEeCCCcEEEEecC--CC-eE-----EEEEeecCCCEEEEEEccCCC
Q 023672 214 LKGNKEGQAGIMSAIAFSPTHTGML-AIGSYSQTSAIYRED--NM-EL-----LYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~~~~~l-~~~~~dg~i~~wd~~--~~-~~-----~~~~~~~~~~v~~~~~spdg~ 278 (279)
. ........++|+| ++..| ++.+.++.|.+||+. ++ .. +..+......+.++++.++|+
T Consensus 175 ~-----~~~~~~~~i~~s~-dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 175 F-----ADISIPNSICFSP-DGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp E-----EEESSEEEEEECT-TSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred e-----CCCcccCCeEEcC-CCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 1 1123467899999 67654 555667889999986 55 32 222222334567888888875
No 220
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.15 E-value=8.2e-09 Score=82.21 Aligned_cols=189 Identities=14% Similarity=0.158 Sum_probs=116.4
Q ss_pred eEEEEEccCCCeEEEeeCC------CeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCC
Q 023672 63 LKGIKWSPDGSSFLTSSED------KTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (279)
Q Consensus 63 v~~~~~~~~~~~l~t~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (279)
-..+..+|+| .++++..+ |.|.++|..+.+......... ....--+++.| +|
T Consensus 140 Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~--------------~~~~~~Yd~~~-------~p 197 (462)
T 2ece_A 140 LHTVHCGPDA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDR--------------GDQYLAYDFWW-------NL 197 (462)
T ss_dssp EEEEEECSSC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBC--------------TTCCCCCCEEE-------ET
T ss_pred ccceeECCCe-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCC--------------CCccccceEEE-------CC
Confidence 3457788999 66665555 789999998776533221100 00011223444 66
Q ss_pred CCcEEEEec-------------------CCCcEEEEECCCCeeeEEEeccCccccccceeeEEE--CCCCCEEEEe----
Q 023672 137 TSCVFASTT-------------------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF--NPTGTKIFAG---- 191 (279)
Q Consensus 137 ~~~~l~s~~-------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~--~~~~~~l~~~---- 191 (279)
+++.++++. .+.+|.+||+.+++.+.++...... .....+.| +|++++++++
T Consensus 198 ~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g---~~P~~i~f~~~Pdg~~aYV~~e~~ 274 (462)
T 2ece_A 198 PNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEEN---RMALELRPLHDPTKLMGFINMVVS 274 (462)
T ss_dssp TTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTE---EEEEEEEECSSTTCCEEEEEEEEE
T ss_pred CCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCC---CccceeEeeECCCCCEEEEEEeee
Confidence 788887774 4689999999999888888764211 13445655 9999988743
Q ss_pred ---cCCeEEEEEccCCCCceeeeeec--cc-----c-------cCCCCCceEEEEEccCCCcEEEEEe-CCCcEEEEecC
Q 023672 192 ---YNKSVRVFDVHRPGRDFEKYSTL--KG-----N-------KEGQAGIMSAIAFSPTHTGMLAIGS-YSQTSAIYRED 253 (279)
Q Consensus 192 ---~d~~i~~~d~~~~~~~~~~~~~~--~~-----~-------~~~~~~~v~~~~~sp~~~~~l~~~~-~dg~i~~wd~~ 253 (279)
.++.|.+|.... + .+.....+ .. . +.+-...+..+.+|| ++++|.++. ..+.|.+||+.
T Consensus 275 ~~~Lss~V~v~~~d~-g-~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~-DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 275 LKDLSSSIWLWFYED-G-KWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISL-DDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp TTTCCEEEEEEEEET-T-EEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECT-TSCEEEEEETTTTEEEEEECS
T ss_pred ccCCCceEEEEEecC-C-ceeEEEEEeCCCccccccccccccccccCCCceeEEEECC-CCCEEEEEeCCCCEEEEEEec
Confidence 456888777664 2 12222211 00 0 000023577899999 666666554 47789999985
Q ss_pred C---CeEEEEEeecC--------------CCEEEEEEccCCCC
Q 023672 254 N---MELLYVLHGQE--------------GGVTHVSKLSSAYT 279 (279)
Q Consensus 254 ~---~~~~~~~~~~~--------------~~v~~~~~spdg~~ 279 (279)
. .+++..+.... +....++++|||++
T Consensus 352 d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~ 394 (462)
T 2ece_A 352 NPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRR 394 (462)
T ss_dssp STTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSE
T ss_pred CCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCE
Confidence 3 35565555321 13688999999984
No 221
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.14 E-value=7.9e-09 Score=81.49 Aligned_cols=227 Identities=15% Similarity=0.078 Sum_probs=132.8
Q ss_pred eeeEecCCCCcccceeeeeeccCC----CCCceEEEEEccCCCeEEEeeC--CCeEEEEeCCCCcccccccc--cc----
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSI----PNNFLKGIKWSPDGSSFLTSSE--DKTLRIFSLPENGISYDVNA--CS---- 102 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~----h~~~v~~~~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~--~~---- 102 (279)
.+.+||..+.+...... ...+ ....-..++|+|||++|+++.. ++.|.++|+.+++....... +.
T Consensus 110 ~VsviD~~t~~v~~~I~---v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g~~~~~P 186 (386)
T 3sjl_D 110 YVEVFDPVTLLPTADIE---LPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPDCYHIFP 186 (386)
T ss_dssp EEEEECTTTCCEEEEEE---ETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEE
T ss_pred EEEEEECCCCeEEEEEE---CCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCCcceeec
Confidence 37788988887665321 1110 0123456899999999988764 68999999999876443321 00
Q ss_pred ------ccCCCCcccceeeecCCCceEEEE---eeCcc------ccc-CCCCcEEEEecCCCcEEEEECCCCe--eeEEE
Q 023672 103 ------LAKDQDSYEASLVVTEGESVYDFC---WFPHM------SAS-DPTSCVFASTTRDHPIHLWDATTGL--LRCTY 164 (279)
Q Consensus 103 ------~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~------~~~-~~~~~~l~s~~~d~~i~i~d~~~~~--~~~~~ 164 (279)
...+.+.....+.....+.+.... +.+.. .+| .++|++++ .+.+|.|.+.|+.++. ....+
T Consensus 187 ~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~V~v~d~~~~~~~v~~~~ 265 (386)
T 3sjl_D 187 TAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGKIHQIDLSSGDAKFLPAV 265 (386)
T ss_dssp EETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSEEEEEECTTSSCEECCCE
T ss_pred CCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCEEEEEECCCCcceeecce
Confidence 011122222222222212221111 11110 122 35665555 5558999999997654 33333
Q ss_pred eccCc-----cccccceeeEEECCCCCEEEEe-c----------CCeEEEEEccCCCCceeeeeecccccCCCCCceEEE
Q 023672 165 RAYDA-----VDEITAAFSVAFNPTGTKIFAG-Y----------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAI 228 (279)
Q Consensus 165 ~~~~~-----~~~~~~v~~~~~~~~~~~l~~~-~----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (279)
..... .-.......+.++|+++.++.. . .+.|.++|+.+. +. ...+.- ...+.++
T Consensus 266 ~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~-kv---~~~i~v-----g~~~~~l 336 (386)
T 3sjl_D 266 EALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTG-ER---LAKFEM-----GHEIDSI 336 (386)
T ss_dssp ESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTC-CE---EEEEEE-----EEEECEE
T ss_pred eccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCC-eE---EEEEEC-----CCCcceE
Confidence 21000 0001133457889999888854 2 257999999983 22 222211 1257899
Q ss_pred EEccCCCc-EEEEE-eCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccC
Q 023672 229 AFSPTHTG-MLAIG-SYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSS 276 (279)
Q Consensus 229 ~~sp~~~~-~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spd 276 (279)
++++ ++. +|+++ ..++.|.++|..+++.+.++... +....|.+++|
T Consensus 337 avs~-D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~-~~p~~l~~s~d 384 (386)
T 3sjl_D 337 NVSQ-DEKPLLYALSTGDKTLYIHDAESGEELRSVNQL-GHGPQVITTAD 384 (386)
T ss_dssp EECS-SSSCEEEEEETTTTEEEEEETTTCCEEEEECCC-CSSCCEEEECC
T ss_pred EECC-CCCeEEEEEcCCCCeEEEEECCCCcEEEEecCC-CCCceeEECCc
Confidence 9999 654 66554 55899999999999999998854 34467888887
No 222
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.14 E-value=2.5e-08 Score=76.98 Aligned_cols=181 Identities=11% Similarity=0.121 Sum_probs=109.5
Q ss_pred CCCceEEEEEccCCC-eEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC
Q 023672 59 PNNFLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 59 h~~~v~~~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (279)
+.....+..|+|+++ ++++...++.|..|+.. +... ........+..+.+ +++
T Consensus 43 ~~~~~egp~~~~~g~~l~~~d~~~~~i~~~~~~-g~~~------------------~~~~~~~~~~gl~~-------d~d 96 (305)
T 3dr2_A 43 QATWSEGPAWWEAQRTLVWSDLVGRRVLGWRED-GTVD------------------VLLDATAFTNGNAV-------DAQ 96 (305)
T ss_dssp CCSSEEEEEEEGGGTEEEEEETTTTEEEEEETT-SCEE------------------EEEESCSCEEEEEE-------CTT
T ss_pred CCcCccCCeEeCCCCEEEEEECCCCEEEEEeCC-CCEE------------------EEeCCCCccceeeE-------CCC
Confidence 445578899999998 56677778999999874 3210 11122334455544 888
Q ss_pred CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE----ec--------------CCeEEEE
Q 023672 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA----GY--------------NKSVRVF 199 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~----~~--------------d~~i~~~ 199 (279)
|+++++...++.|.+|+.. ++.......... .....+..++++|+|+++++ |. .+.|..|
T Consensus 97 G~l~v~~~~~~~v~~~~~~-g~~~~~~~~~~~-~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~ 174 (305)
T 3dr2_A 97 QRLVHCEHGRRAITRSDAD-GQAHLLVGRYAG-KRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRL 174 (305)
T ss_dssp SCEEEEETTTTEEEEECTT-SCEEEEECEETT-EECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEE
T ss_pred CCEEEEECCCCEEEEECCC-CCEEEEEeccCC-CccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEE
Confidence 9877766667889999986 553322221111 11125678999999998885 31 2457777
Q ss_pred EccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC------CcEEEEecCCCeEE--EEEe-ecCCCEEE
Q 023672 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS------QTSAIYREDNMELL--YVLH-GQEGGVTH 270 (279)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d------g~i~~wd~~~~~~~--~~~~-~~~~~v~~ 270 (279)
|..++ . ..... .......++|+| ++..|+.+... +.|++||+..+... ..+. ...+.+.+
T Consensus 175 d~~~g-~-~~~~~--------~~~~p~gl~~sp-dg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdg 243 (305)
T 3dr2_A 175 PPDGS-P-LQRMA--------DLDHPNGLAFSP-DEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDG 243 (305)
T ss_dssp CSSSC-C-CEEEE--------EESSEEEEEECT-TSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCS
T ss_pred cCCCC-c-EEEEe--------cCCCCcceEEcC-CCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCe
Confidence 76542 1 11111 123467899999 77766665554 68999998765421 1111 11233456
Q ss_pred EEEccCCC
Q 023672 271 VSKLSSAY 278 (279)
Q Consensus 271 ~~~spdg~ 278 (279)
+++.++|+
T Consensus 244 i~~d~~G~ 251 (305)
T 3dr2_A 244 FCVDRGGW 251 (305)
T ss_dssp EEECTTSC
T ss_pred EEECCCCC
Confidence 77777764
No 223
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.13 E-value=1.8e-07 Score=69.93 Aligned_cols=179 Identities=8% Similarity=0.033 Sum_probs=115.3
Q ss_pred ceEEEEEccCCCeEEEeeC--CCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 62 FLKGIKWSPDGSSFLTSSE--DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 62 ~v~~~~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
....++|++++.++++.+. ++.|.++|+.+++...... .........+.+ . .+.
T Consensus 22 f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~----------------l~~~~fgeGi~~-------~-g~~ 77 (266)
T 2iwa_A 22 FTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHK----------------MDDSYFGEGLTL-------L-NEK 77 (266)
T ss_dssp CEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEE----------------CCTTCCEEEEEE-------E-TTE
T ss_pred CcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEe----------------cCCCcceEEEEE-------e-CCE
Confidence 4679999998754444443 5799999999876543211 111111112222 2 223
Q ss_pred EEEEecCCCcEEEEECCCCeeeEEEecc-CccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccc
Q 023672 140 VFASTTRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~ 217 (279)
..++.-.++.+.++|..+.+.+..+... .. ...++++++.++++ .++.|.++|..+. +... .+.-.
T Consensus 78 lyv~t~~~~~v~viD~~t~~v~~~i~~g~~~--------g~glt~Dg~~l~vs~gs~~l~viD~~t~-~v~~---~I~Vg 145 (266)
T 2iwa_A 78 LYQVVWLKNIGFIYDRRTLSNIKNFTHQMKD--------GWGLATDGKILYGSDGTSILYEIDPHTF-KLIK---KHNVK 145 (266)
T ss_dssp EEEEETTCSEEEEEETTTTEEEEEEECCSSS--------CCEEEECSSSEEEECSSSEEEEECTTTC-CEEE---EEECE
T ss_pred EEEEEecCCEEEEEECCCCcEEEEEECCCCC--------eEEEEECCCEEEEECCCCeEEEEECCCC-cEEE---EEEEC
Confidence 4445556889999999999999888754 21 23455678777755 7889999999873 2222 22111
Q ss_pred cCC-CCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC-------------CCEEEEEEccCCC
Q 023672 218 KEG-QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-------------GGVTHVSKLSSAY 278 (279)
Q Consensus 218 ~~~-~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-------------~~v~~~~~spdg~ 278 (279)
..+ .-..+..+.|. ++.+++....++.|.+.|..+++.+..+.... ....+++|+|+|+
T Consensus 146 ~~~~p~~~~nele~~--dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~ 218 (266)
T 2iwa_A 146 YNGHRVIRLNELEYI--NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENK 218 (266)
T ss_dssp ETTEECCCEEEEEEE--TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTT
T ss_pred CCCcccccceeEEEE--CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCC
Confidence 011 11236677887 35666666668899999999999998887421 3568999999985
No 224
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.12 E-value=1.4e-07 Score=74.90 Aligned_cols=187 Identities=12% Similarity=-0.063 Sum_probs=105.7
Q ss_pred eEEEEEccCCCeEEEeeC--CCeEEEEeCCCCccccc-ccccc--cc-C---------CCCcccceeeecCCCceEEEE-
Q 023672 63 LKGIKWSPDGSSFLTSSE--DKTLRIFSLPENGISYD-VNACS--LA-K---------DQDSYEASLVVTEGESVYDFC- 126 (279)
Q Consensus 63 v~~~~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~-~~~~~--~~-~---------~~~~~~~~~~~~~~~~v~~~~- 126 (279)
-..++|+|||++|+++.. ++.|.++| .+++.... ..... .. . ..+.....+.. .+..+....
T Consensus 127 p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~~~~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~ 204 (373)
T 2mad_H 127 SWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTCYHIHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLV 204 (373)
T ss_pred ccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCceEEEEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEec
Confidence 457899999999998874 57899999 88766443 22110 00 0 01111111111 111110100
Q ss_pred ---e---eC--cccccCCCCcEEEEecCCCcEEEEECCCCe--eeEEEeccCcc-----ccccceeeEEECCCCCEEEEe
Q 023672 127 ---W---FP--HMSASDPTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDAV-----DEITAAFSVAFNPTGTKIFAG 191 (279)
Q Consensus 127 ---~---~~--~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~--~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~ 191 (279)
+ .| ....+.+++..++..+..+.+.+.|+.++. ....+...... -.......+.++|+++.+++.
T Consensus 205 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~ 284 (373)
T 2mad_H 205 GAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLL 284 (373)
T ss_pred cccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEE
Confidence 0 00 001223344444444467889999987553 22222211100 001123447899999888754
Q ss_pred -c----------CCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCc-EEEEEe-CCCcEEEEecCCCeEE
Q 023672 192 -Y----------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGS-YSQTSAIYREDNMELL 258 (279)
Q Consensus 192 -~----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~-~dg~i~~wd~~~~~~~ 258 (279)
. ++.|.++|..+. +....+. . .....+++|+| ++. +++++. .++.|.+||+.+++.+
T Consensus 285 ~~~~~~~~~~~~~~~V~VID~~t~----~vv~~i~---~--g~~p~~i~~s~-Dg~~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 285 TSEQSAWKLHAAAKEVTSVTGLVG----QTSSQIS---L--GHDVDAISVAQ-DGGPDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred eccCCcccccCCCCeEEEEECCCC----EEEEEEE---C--CCCcCeEEECC-CCCeEEEEEcCCCCeEEEEECCCCCEE
Confidence 2 357999999873 3323331 1 22578999999 676 777776 5899999999999998
Q ss_pred EEE
Q 023672 259 YVL 261 (279)
Q Consensus 259 ~~~ 261 (279)
..+
T Consensus 355 ~~i 357 (373)
T 2mad_H 355 QST 357 (373)
T ss_pred eee
Confidence 884
No 225
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.11 E-value=1.7e-07 Score=69.35 Aligned_cols=179 Identities=6% Similarity=0.041 Sum_probs=114.2
Q ss_pred CceEEEEEccCCCeEEEeeCCC--eEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDK--TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
.....+.|+ ++.++.+.+.+| .|+++|+.+++...... ......--.+.. . .+
T Consensus 43 ~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~----------------l~~~~FgeGit~-------~-g~ 97 (262)
T 3nol_A 43 AFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIE----------------LGKRYFGEGISD-------W-KD 97 (262)
T ss_dssp CEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEE----------------CCTTCCEEEEEE-------E-TT
T ss_pred cccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEe----------------cCCccceeEEEE-------e-CC
Confidence 345789998 676666777766 89999999886543221 111000011111 1 12
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~ 217 (279)
+..+..-.++.+.+||..+.+.+.++..... -..++ ++++.|+.+ .++.|.++|..+. + ....+.-.
T Consensus 98 ~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~e------G~glt--~dg~~L~~SdGs~~i~~iDp~T~-~---v~~~I~V~ 165 (262)
T 3nol_A 98 KIVGLTWKNGLGFVWNIRNLRQVRSFNYDGE------GWGLT--HNDQYLIMSDGTPVLRFLDPESL-T---PVRTITVT 165 (262)
T ss_dssp EEEEEESSSSEEEEEETTTCCEEEEEECSSC------CCCEE--ECSSCEEECCSSSEEEEECTTTC-S---EEEEEECE
T ss_pred EEEEEEeeCCEEEEEECccCcEEEEEECCCC------ceEEe--cCCCEEEEECCCCeEEEEcCCCC-e---EEEEEEec
Confidence 3333444688999999999999999886542 12344 567777755 6788999999873 2 22222211
Q ss_pred cCCCC-CceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec------------CCCEEEEEEccCCC
Q 023672 218 KEGQA-GIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ------------EGGVTHVSKLSSAY 278 (279)
Q Consensus 218 ~~~~~-~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~------------~~~v~~~~~spdg~ 278 (279)
..+.. ..++.+.|. ++.+++..-.++.|.+.|..+++.+..+... ....++|||+|+++
T Consensus 166 ~~g~~~~~lNELe~~--~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~ 237 (262)
T 3nol_A 166 AHGEELPELNELEWV--DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHH 237 (262)
T ss_dssp ETTEECCCEEEEEEE--TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTT
T ss_pred cCCccccccceeEEE--CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCC
Confidence 11111 335567775 4666666667889999999999999888742 13569999999864
No 226
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=8e-09 Score=88.40 Aligned_cols=190 Identities=7% Similarity=0.101 Sum_probs=114.8
Q ss_pred EEEEEccCCCeEEEeeCCC-------------------eEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEE
Q 023672 64 KGIKWSPDGSSFLTSSEDK-------------------TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYD 124 (279)
Q Consensus 64 ~~~~~~~~~~~l~t~~~dg-------------------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 124 (279)
..++++|++..|+.++.++ +|..+|..+++......... ++.+. ... ...++.
T Consensus 246 ~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~----~d~wd--~~~-~~~p~l- 317 (677)
T 1kb0_A 246 DSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETP----GDNWD--YTS-TQPMIL- 317 (677)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST----TCCSC--CCC-CSCCEE-
T ss_pred cceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCC----Ccccc--ccc-CCCcEE-
Confidence 4678999888888877664 48888888876543221110 00000 000 001111
Q ss_pred EEeeCcccccCCCC---cEEEEecCCCcEEEEECCCCeeeEEEeccCcc------ccccce-------------------
Q 023672 125 FCWFPHMSASDPTS---CVFASTTRDHPIHLWDATTGLLRCTYRAYDAV------DEITAA------------------- 176 (279)
Q Consensus 125 ~~~~~~~~~~~~~~---~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~------~~~~~v------------------- 176 (279)
.....+| ..++.++.+|.|+++|..+|+.+..+...... ....++
T Consensus 318 -------~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~ 390 (677)
T 1kb0_A 318 -------ADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPY 390 (677)
T ss_dssp -------EEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTT
T ss_pred -------EecccCCcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcc
Confidence 1112255 57899999999999999999988776533210 000000
Q ss_pred -----eeEEECCCCCEEEEe-c-------------------------------------------CCeEEEEEccCCCCc
Q 023672 177 -----FSVAFNPTGTKIFAG-Y-------------------------------------------NKSVRVFDVHRPGRD 207 (279)
Q Consensus 177 -----~~~~~~~~~~~l~~~-~-------------------------------------------d~~i~~~d~~~~~~~ 207 (279)
..++|+|++.++++. . .+.|..||+.++
T Consensus 391 G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG--- 467 (677)
T 1kb0_A 391 GAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQ--- 467 (677)
T ss_dssp CSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTT---
T ss_pred cccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCC---
Confidence 257889988777753 2 167999999885
Q ss_pred eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCC-CEEEEEEccCCC
Q 023672 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEG-GVTHVSKLSSAY 278 (279)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~-~v~~~~~spdg~ 278 (279)
+...... +..++....+.. .+.+++.++.||.+++||.++++.+..+....+ ...-+.|.++|+
T Consensus 468 -~~~W~~~-----~~~~~~~g~~~~-~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~ 532 (677)
T 1kb0_A 468 -KAAWSVE-----HVSPWNGGTLTT-AGNVVFQGTADGRLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGR 532 (677)
T ss_dssp -EEEEEEE-----ESSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred -cEEeecC-----CCCCCcCcceEe-CCCEEEEECCCCcEEEEECCCCceeeeeeCCCCcccCCEEEEeCCE
Confidence 2222221 112333445666 666888889999999999999999988875432 112244556653
No 227
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.98 E-value=1e-07 Score=76.43 Aligned_cols=229 Identities=13% Similarity=0.022 Sum_probs=129.6
Q ss_pred eeeEecCCCCcccceeeee-eccCCCCCceEEEEEccCCCeEEEeeC--CCeEEEEeCCCCcccccccccc---------
Q 023672 35 PLIRFDVPPHRTYHFYNQF-RTSSIPNNFLKGIKWSPDGSSFLTSSE--DKTLRIFSLPENGISYDVNACS--------- 102 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~-~~~~~h~~~v~~~~~~~~~~~l~t~~~--dg~i~iwd~~~~~~~~~~~~~~--------- 102 (279)
.+.++|..+.+.......- .........-..++|+|||++|+++.. ++.|.+.|+.+++.........
T Consensus 150 ~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~ 229 (426)
T 3c75_H 150 YVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASP 229 (426)
T ss_dssp EEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEET
T ss_pred EEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCC
Confidence 4778888888776532210 000000122456899999999998874 5789999999887644332210
Q ss_pred ---ccCCCCcccceeeecCCCceEEE---Ee----eC--cccccCCCCcEEEEecCCCcEEEEECCCCeee--EEEecc-
Q 023672 103 ---LAKDQDSYEASLVVTEGESVYDF---CW----FP--HMSASDPTSCVFASTTRDHPIHLWDATTGLLR--CTYRAY- 167 (279)
Q Consensus 103 ---~~~~~~~~~~~~~~~~~~~v~~~---~~----~~--~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~--~~~~~~- 167 (279)
.....+.....+.. ..+.+... .+ .| ....+.+++..++..+..+.|.+.|+...... ..+...
T Consensus 230 ~~~v~~~~dG~~~~V~~-~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~ 308 (426)
T 3c75_H 230 TVFYMNCRDGSLARVDF-ADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALT 308 (426)
T ss_dssp TEEEEEETTSSEEEEEC-CTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSC
T ss_pred cEEEEEcCCCCEEEEEC-CCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeecc
Confidence 00001111111111 11111110 00 01 01234777777777777889999998765422 111111
Q ss_pred -Cccc---cccceeeEEECCCCCEEEEe-c----------CCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEcc
Q 023672 168 -DAVD---EITAAFSVAFNPTGTKIFAG-Y----------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSP 232 (279)
Q Consensus 168 -~~~~---~~~~v~~~~~~~~~~~l~~~-~----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp 232 (279)
.... .......+.++|+++.+++. . ++.|.++|..+. +. ...+.- ......+.|+|
T Consensus 309 ~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~-kv---v~~I~v-----g~~P~gia~sp 379 (426)
T 3c75_H 309 EAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETG-ER---INKIEL-----GHEIDSINVSQ 379 (426)
T ss_dssp TTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTC-CE---EEEEEE-----EEEECEEEECC
T ss_pred ccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCC-eE---EEEEEC-----CCCcCeEEEcc
Confidence 0000 00122347899998877754 2 357999999983 32 223311 12478999999
Q ss_pred CCCc-EEEEEe-CCCcEEEEecCCCeEEEEEe-ecCCCEEEEEEccC
Q 023672 233 THTG-MLAIGS-YSQTSAIYREDNMELLYVLH-GQEGGVTHVSKLSS 276 (279)
Q Consensus 233 ~~~~-~l~~~~-~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~spd 276 (279)
++. +++++. .++.|.++|+.+++.+.++. .-..+ .+.++||
T Consensus 380 -Dg~~~lyv~n~~s~~VsVID~~t~kvv~tI~~vG~~P--~~i~~~~ 423 (426)
T 3c75_H 380 -DAEPLLYALSAGTQTLHIYDAATGEELRSVDQLGRGP--QIITTHD 423 (426)
T ss_dssp -SSSCEEEEEETTTTEEEEEETTTCCEEEEECCCSSSC--CEEECCC
T ss_pred -CCCEEEEEEcCCCCeEEEEECCCCCEEEEecCCCCCC--cEEEcCC
Confidence 776 777777 58999999999999998873 22222 2666665
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.98 E-value=2.1e-07 Score=74.22 Aligned_cols=184 Identities=11% Similarity=0.081 Sum_probs=110.8
Q ss_pred cCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCce---EEEEeeCcccccCCCCcEEEEec
Q 023672 70 PDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESV---YDFCWFPHMSASDPTSCVFASTT 145 (279)
Q Consensus 70 ~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v---~~~~~~~~~~~~~~~~~~l~s~~ 145 (279)
+++++|+ ++..+++|.|+|+.+....... ...+. ...+ .... .|+.+...|+| +++++.
T Consensus 93 ~~r~~l~v~~l~s~~I~viD~~t~p~~p~~------------~k~ie---~~~~~~~~g~s-~Ph~~~~~pdG-i~Vs~~ 155 (462)
T 2ece_A 93 IERRFLIVPGLRSSRIYIIDTKPNPREPKI------------IKVIE---PEEVKKVSGYS-RLHTVHCGPDA-IYISAL 155 (462)
T ss_dssp CCSCEEEEEBTTTCCEEEEECCSCTTSCEE------------EEEEC---HHHHHHHHCEE-EEEEEEECSSC-EEEEEE
T ss_pred ccCCEEEEccCCCCeEEEEECCCCCCCcee------------eeeec---hhhcccccCCC-cccceeECCCe-EEEEcC
Confidence 7777665 5667899999999744211000 00010 0000 0011 24445568888 666665
Q ss_pred CC------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEec--------------------CCeEEEE
Q 023672 146 RD------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY--------------------NKSVRVF 199 (279)
Q Consensus 146 ~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--------------------d~~i~~~ 199 (279)
.+ +.|.++|..+.+.+..+....... ..-+.+.|+|+++.++++. +.+|.+|
T Consensus 156 g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~--~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~ 233 (462)
T 2ece_A 156 GNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQ--YLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFW 233 (462)
T ss_dssp EETTSCSCCEEEEECTTTCCEEEECCSBCTTC--CCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEE
T ss_pred CCcCCCCCCeEEEEECCCCeEEEEEccCCCCc--cccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEE
Confidence 54 789999999999998887543211 1345688999999888763 7899999
Q ss_pred EccCCCCceeeeeecccccCCCCCceEEEEE--ccCCCcEEEEEe------CCCcEEEEecCCCeE--EEEE--eec---
Q 023672 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAF--SPTHTGMLAIGS------YSQTSAIYREDNMEL--LYVL--HGQ--- 264 (279)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~--sp~~~~~l~~~~------~dg~i~~wd~~~~~~--~~~~--~~~--- 264 (279)
|+.+. +...++.. .........+.| +| ++.+++.++ .+++|.+|....++. +..+ ...
T Consensus 234 D~~~~----k~~~tI~v--g~~g~~P~~i~f~~~P-dg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~ 306 (462)
T 2ece_A 234 DLRKR----KRIHSLTL--GEENRMALELRPLHDP-TKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLE 306 (462)
T ss_dssp ETTTT----EEEEEEES--CTTEEEEEEEEECSST-TCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECC
T ss_pred ECCCC----cEeeEEec--CCCCCccceeEeeECC-CCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCcccc
Confidence 99873 22233321 111223445555 99 777766665 566888777655432 2222 110
Q ss_pred -------------CCCEEEEEEccCCCC
Q 023672 265 -------------EGGVTHVSKLSSAYT 279 (279)
Q Consensus 265 -------------~~~v~~~~~spdg~~ 279 (279)
...+..+.+||||||
T Consensus 307 ~~lp~~~~~f~~~~~~pa~I~lS~DGrf 334 (462)
T 2ece_A 307 GNLPEILKPFKAVPPLVTDIDISLDDKF 334 (462)
T ss_dssp SSCCGGGGGGTEECCCCCCEEECTTSCE
T ss_pred ccccccccccccCCCceeEEEECCCCCE
Confidence 134688999999985
No 229
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.98 E-value=4.7e-08 Score=84.14 Aligned_cols=200 Identities=13% Similarity=0.108 Sum_probs=114.2
Q ss_pred eeeeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCe-------------EEEEeCCCCccccccc
Q 023672 33 TWPLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKT-------------LRIFSLPENGISYDVN 99 (279)
Q Consensus 33 ~~~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~-------------i~iwd~~~~~~~~~~~ 99 (279)
...++++|+.+++.+.. .+ +......++|+ |++.|+.++.+.. |++|++.++.....
T Consensus 154 ~~~i~v~dl~tg~~~~~-----~~--~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~-- 223 (693)
T 3iuj_A 154 WREIHLMDVESKQPLET-----PL--KDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDR-- 223 (693)
T ss_dssp EEEEEEEETTTCSEEEE-----EE--EEEESCCCEEE-TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCE--
T ss_pred eEEEEEEECCCCCCCcc-----cc--CCceeccEEEe-CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccce--
Confidence 34677888888775431 11 11113567899 9999998887743 88998876432100
Q ss_pred cccccCCCCcccceeeec---CCCceEEEEeeCcccccCCCCcEEEEec----CCCcEEEEECCCCe-eeEEEeccCccc
Q 023672 100 ACSLAKDQDSYEASLVVT---EGESVYDFCWFPHMSASDPTSCVFASTT----RDHPIHLWDATTGL-LRCTYRAYDAVD 171 (279)
Q Consensus 100 ~~~~~~~~~~~~~~~~~~---~~~~v~~~~~~~~~~~~~~~~~~l~s~~----~d~~i~i~d~~~~~-~~~~~~~~~~~~ 171 (279)
.+... +......+.| +|+|++|+... .+..|.++|+.++. ....+..+..
T Consensus 224 -------------~v~~~~~~~~~~~~~~~~-------SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~-- 281 (693)
T 3iuj_A 224 -------------LVFGAIPAQHHRYVGATV-------TEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLD-- 281 (693)
T ss_dssp -------------EEESCSGGGCCSEEEEEE-------CTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSS--
T ss_pred -------------EEEecCCCCCeEEEEEEE-------cCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCC--
Confidence 01111 1122445544 88998875543 23589999998763 2334443332
Q ss_pred cccceeeEEECCCCCEEE-Ee-c---CCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEE-eCCC
Q 023672 172 EITAAFSVAFNPTGTKIF-AG-Y---NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIG-SYSQ 245 (279)
Q Consensus 172 ~~~~v~~~~~~~~~~~l~-~~-~---d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~-~~dg 245 (279)
..... |++++..|+ .+ . .+.|..+|+.++... ....+ ..|...+. .|++ ++..|+.. ..++
T Consensus 282 ---~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~~~~~~--~~~~l----~~~~~~~~--~~s~-~g~~lv~~~~~~g 348 (693)
T 3iuj_A 282 ---ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAANPGPA--HWRDL----IPERQQVL--TVHS-GSGYLFAEYMVDA 348 (693)
T ss_dssp ---SCEEE-EEEETTEEEEEECTTCTTCEEEEEETTSCCGG--GCEEE----ECCCSSCE--EEEE-ETTEEEEEEEETT
T ss_pred ---ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCCcc--ccEEE----ecCCCCEE--EEEE-ECCEEEEEEEECC
Confidence 33333 666666555 44 3 367999999874210 11122 23333444 8899 55555544 4454
Q ss_pred --cEEEEecCCCeEEEEEee-cCCCEEEEEEccCCC
Q 023672 246 --TSAIYREDNMELLYVLHG-QEGGVTHVSKLSSAY 278 (279)
Q Consensus 246 --~i~~wd~~~~~~~~~~~~-~~~~v~~~~~spdg~ 278 (279)
.|++||+..+. ...+.. ..+.+..+.++||+.
T Consensus 349 ~~~l~~~d~~g~~-~~~l~~p~~~~~~~~~~~~d~~ 383 (693)
T 3iuj_A 349 TARVEQFDYEGKR-VREVALPGLGSVSGFNGKHDDP 383 (693)
T ss_dssp EEEEEEECTTSCE-EEEECCSSSSEEEECCCCTTCS
T ss_pred eeEEEEEECCCCe-eEEeecCCCceEEeeecCCCCC
Confidence 58899987543 444443 334577777777764
No 230
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.95 E-value=3.9e-08 Score=84.35 Aligned_cols=189 Identities=11% Similarity=0.106 Sum_probs=113.6
Q ss_pred EEEEccCCCeEEEeeCCCe-------------------EEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEE
Q 023672 65 GIKWSPDGSSFLTSSEDKT-------------------LRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDF 125 (279)
Q Consensus 65 ~~~~~~~~~~l~t~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 125 (279)
.++++|+...++.++.++. |..||..+++......... ++... .....+....
T Consensus 239 ~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~----~d~wd----~~~~~~~~l~ 310 (689)
T 1yiq_A 239 SFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTP----GDAWD----YTATQHMILA 310 (689)
T ss_dssp CEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESST----TCCSC----CCCCSCEEEE
T ss_pred ceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCC----ccccc----ccCCCCcEEE
Confidence 6789998888988887764 8899999886643321110 00000 0000011000
Q ss_pred EeeCcccccCCCCc---EEEEecCCCcEEEEECCCCeeeEEEeccCcc-----------------------cc-------
Q 023672 126 CWFPHMSASDPTSC---VFASTTRDHPIHLWDATTGLLRCTYRAYDAV-----------------------DE------- 172 (279)
Q Consensus 126 ~~~~~~~~~~~~~~---~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~-----------------------~~------- 172 (279)
.. ..+|. .++.++.+|.++++|.++|+.+......... ..
T Consensus 311 d~-------~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p 383 (689)
T 1yiq_A 311 EL-------PIDGKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTP 383 (689)
T ss_dssp EE-------EETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESS
T ss_pred ee-------ccCCcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCC
Confidence 00 11343 7888999999999999999987544322100 00
Q ss_pred ----ccceeeEEECCCCCEEEEe-c---------------------------------------------CCeEEEEEcc
Q 023672 173 ----ITAAFSVAFNPTGTKIFAG-Y---------------------------------------------NKSVRVFDVH 202 (279)
Q Consensus 173 ----~~~v~~~~~~~~~~~l~~~-~---------------------------------------------d~~i~~~d~~ 202 (279)
...-..++|+|+..++++. . ++.|+.||+.
T Consensus 384 ~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~ 463 (689)
T 1yiq_A 384 AFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPV 463 (689)
T ss_dssp CTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETT
T ss_pred CcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECC
Confidence 0001237888887777643 1 3779999999
Q ss_pred CCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCC-EEEEEEccCCC
Q 023672 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGG-VTHVSKLSSAY 278 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~-v~~~~~spdg~ 278 (279)
++ +....... ..++..-.+.. .+.+++.|+.||.|+.||.++|+.+.+++...+. ..-+.|..||+
T Consensus 464 tG----~~~W~~~~-----~~~~~~g~~~t-agglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 464 KQ----QAAWEVPY-----VTIFNGGTLST-AGNLVFEGSADGRVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGE 530 (689)
T ss_dssp TT----EEEEEEEE-----SSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CC----CeEeEccC-----CCCccCccceE-CCCEEEEECCCCcEEEEECCCCccceeeeCCCCcccCceEEEECCE
Confidence 85 22222211 11222335556 6678999999999999999999999888755331 12355667765
No 231
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.95 E-value=1e-06 Score=65.34 Aligned_cols=178 Identities=11% Similarity=0.076 Sum_probs=115.7
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (279)
.....+.|+ ++.++.+.+.+|.|+++|+.+++..... ......--.+.. . .+++
T Consensus 55 ~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-----------------l~~~~FgeGit~-------~-g~~L 108 (268)
T 3nok_A 55 AFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-----------------RLGNIFAEGLAS-------D-GERL 108 (268)
T ss_dssp CCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-----------------ECTTCCEEEEEE-------C-SSCE
T ss_pred cccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-----------------CCCCcceeEEEE-------e-CCEE
Confidence 445788887 4566678888899999999988654332 111000011211 2 1233
Q ss_pred EEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccC
Q 023672 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (279)
Q Consensus 141 l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 219 (279)
.+..-.++.+.+||..+.+.+.++..... -+.++ ++++.|+.+ .++.|.++|..+. +... .+.-...
T Consensus 109 y~ltw~~~~v~V~D~~Tl~~~~ti~~~~e------GwGLt--~Dg~~L~vSdGs~~l~~iDp~T~-~v~~---~I~V~~~ 176 (268)
T 3nok_A 109 YQLTWTEGLLFTWSGMPPQRERTTRYSGE------GWGLC--YWNGKLVRSDGGTMLTFHEPDGF-ALVG---AVQVKLR 176 (268)
T ss_dssp EEEESSSCEEEEEETTTTEEEEEEECSSC------CCCEE--EETTEEEEECSSSEEEEECTTTC-CEEE---EEECEET
T ss_pred EEEEccCCEEEEEECCcCcEEEEEeCCCc------eeEEe--cCCCEEEEECCCCEEEEEcCCCC-eEEE---EEEeCCC
Confidence 44445688999999999999999886432 23444 567777765 7899999999873 2222 2211111
Q ss_pred C-CCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec-------------CCCEEEEEEccCCC
Q 023672 220 G-QAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-------------EGGVTHVSKLSSAY 278 (279)
Q Consensus 220 ~-~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~-------------~~~v~~~~~spdg~ 278 (279)
+ .-..++.+.|. +|.+++..-.++.|.+.|..+++.+..+... .+-.++||++|+++
T Consensus 177 g~~v~~lNeLe~~--dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~ 247 (268)
T 3nok_A 177 GQPVELINELECA--NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG 247 (268)
T ss_dssp TEECCCEEEEEEE--TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC
T ss_pred CcccccccccEEe--CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC
Confidence 1 11245677776 4566666667889999999999998887742 13579999999865
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.91 E-value=8.2e-07 Score=66.41 Aligned_cols=186 Identities=5% Similarity=-0.060 Sum_probs=114.0
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEE-eeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLT-SSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t-~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+.++|+.+++...... +..+ .....+++. +..|+. .-.++.+.++|..+.+....
T Consensus 45 ~v~~iD~~tg~v~~~i~----l~~~-~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~v~~~---------------- 101 (266)
T 2iwa_A 45 SVRQVALQTGKVENIHK----MDDS-YFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLSNIKN---------------- 101 (266)
T ss_dssp EEEEEETTTCCEEEEEE----CCTT-CCEEEEEEE--TTEEEEEETTCSEEEEEETTTTEEEEE----------------
T ss_pred EEEEEECCCCCEEEEEe----cCCC-cceEEEEEe--CCEEEEEEecCCEEEEEECCCCcEEEE----------------
Confidence 46778888888765322 1122 122344444 555554 44588999999987644221
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-c
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 192 (279)
+... .|....+++++..++.+..++.|.++|..+.+.+..+...........++.+.|. ++..++.. .
T Consensus 102 i~~g----------~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~ 170 (266)
T 2iwa_A 102 FTHQ----------MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQ 170 (266)
T ss_dssp EECC----------SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred EECC----------CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCC
Confidence 1111 0222234557777777777899999999999888887754321222235677887 66554544 7
Q ss_pred CCeEEEEEccCCCCceeeeeeccc------ccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCC
Q 023672 193 NKSVRVFDVHRPGRDFEKYSTLKG------NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (279)
Q Consensus 193 d~~i~~~d~~~~~~~~~~~~~~~~------~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~ 255 (279)
++.|.+.|..++ +....+..-.. ...........++|+|++..+++++...+.|.+.++...
T Consensus 171 ~~~V~vID~~tg-~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 171 TDCIARISAKDG-TLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp SSEEEEEETTTC-CEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSEEEEEEEEEC
T ss_pred CCeEEEEECCCC-cEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCeEEEEEEecc
Confidence 899999999984 33332221000 000112356899999955678888888889988887654
No 233
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.91 E-value=6e-06 Score=61.38 Aligned_cols=199 Identities=10% Similarity=0.055 Sum_probs=118.4
Q ss_pred ccCCCCCceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccc
Q 023672 55 TSSIPNNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSA 133 (279)
Q Consensus 55 ~~~~h~~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 133 (279)
.+.+-.+.+..++|+|++..|+ +...++.|...|.. +..... +........-.+++
T Consensus 21 ~l~g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~----------------i~l~g~~D~EGIa~------ 77 (255)
T 3qqz_A 21 EIAGITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRT----------------IPLDFVKDLETIEY------ 77 (255)
T ss_dssp ECTTCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEE----------------EECSSCSSEEEEEE------
T ss_pred ECCCcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEE----------------EecCCCCChHHeEE------
Confidence 4555566799999999766554 57778888888887 432211 11111123334433
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCee---eEEEecc-CccccccceeeEEECCCCCEEE-EecCCeEEEEEccC--CCC
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLL---RCTYRAY-DAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHR--PGR 206 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~---~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~-~~~d~~i~~~d~~~--~~~ 206 (279)
.+++.++++.-.++.+.++++..... +...... ...........++|+|.++.|+ +.......+|.++. ...
T Consensus 78 -~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~ 156 (255)
T 3qqz_A 78 -IGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSN 156 (255)
T ss_dssp -CSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSS
T ss_pred -eCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCC
Confidence 66777777766678888988865432 2223211 1112223578999999987666 44333344444431 111
Q ss_pred ceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC---------CCEEEEEEccCC
Q 023672 207 DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE---------GGVTHVSKLSSA 277 (279)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~---------~~v~~~~~spdg 277 (279)
..............+...+.+++++|..+.+++.......+..+|.. ++.+..+.-.. ...-+|+|.|+|
T Consensus 157 ~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G 235 (255)
T 3qqz_A 157 ELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASG 235 (255)
T ss_dssp CCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTC
T ss_pred ceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCC
Confidence 11211110000012234578999999778888888888889999964 66666655332 256899999998
Q ss_pred C
Q 023672 278 Y 278 (279)
Q Consensus 278 ~ 278 (279)
+
T Consensus 236 ~ 236 (255)
T 3qqz_A 236 N 236 (255)
T ss_dssp C
T ss_pred C
Confidence 5
No 234
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.90 E-value=3.2e-07 Score=67.92 Aligned_cols=170 Identities=8% Similarity=-0.020 Sum_probs=103.4
Q ss_pred eeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 36 LIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 36 ~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
+..+|+.+++..... +. .........+++..|. ..-.++.+.+||..+.+.....
T Consensus 77 v~~iD~~Tgkv~~~~-----l~---~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti---------------- 132 (268)
T 3nok_A 77 LRQLSLESAQPVWME-----RL---GNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT---------------- 132 (268)
T ss_dssp EEECCSSCSSCSEEE-----EC---TTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE----------------
T ss_pred EEEEECCCCcEEeEE-----CC---CCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE----------------
Confidence 777888888877632 11 1233322333444444 4445889999999876543221
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN 193 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d 193 (279)
.+.+....+.+++..|+.+..++.|.++|..+.+.+..+...........++.+.|. +|+.++.. .+
T Consensus 133 -----------~~~~eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s 200 (268)
T 3nok_A 133 -----------RYSGEGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHS 200 (268)
T ss_dssp -----------ECSSCCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTC
T ss_pred -----------eCCCceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCC
Confidence 111111233446778877777899999999999988888765433333345667776 67655555 78
Q ss_pred CeEEEEEccCCCCceeeeee--cccc----cCCCCCceEEEEEccCCCcEEEEEe
Q 023672 194 KSVRVFDVHRPGRDFEKYST--LKGN----KEGQAGIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~--~~~~----~~~~~~~v~~~~~sp~~~~~l~~~~ 242 (279)
..|.+.|..++ +....+.. +... ......-.+.|+++|+...++++|-
T Consensus 201 ~~I~vIDp~TG-~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 201 SDVLEIDPATG-TVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp SEEEEECTTTC-BEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred CeEEEEeCCCC-cEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 89999999984 33332211 1000 1112345789999996666777664
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.90 E-value=3.8e-06 Score=61.67 Aligned_cols=179 Identities=12% Similarity=0.117 Sum_probs=113.3
Q ss_pred CceEEEEEccCCCeEEEeeCCC--eEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDK--TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg--~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
...-.+.|++ +.++.+.+.+| .|+++|+.+++........ ....--.+.. . ++
T Consensus 21 ~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~----------------~~~fgeGi~~-------~-~~ 75 (243)
T 3mbr_X 21 AFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVP----------------PPYFGAGIVA-------W-RD 75 (243)
T ss_dssp CCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECC----------------TTCCEEEEEE-------E-TT
T ss_pred cccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCC----------------CCcceeEEEE-------e-CC
Confidence 4567899986 55556666654 8999999988654322111 1000011111 1 23
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~ 217 (279)
+.....-.++.+.+||..+.+.+.++..... -..++ +++..|+.+ .++.|.++|..+. +. ...+.-.
T Consensus 76 ~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~~------Gwglt--~dg~~L~vSdgs~~l~~iDp~t~-~~---~~~I~V~ 143 (243)
T 3mbr_X 76 RLIQLTWRNHEGFVYDLATLTPRARFRYPGE------GWALT--SDDSHLYMSDGTAVIRKLDPDTL-QQ---VGSIKVT 143 (243)
T ss_dssp EEEEEESSSSEEEEEETTTTEEEEEEECSSC------CCEEE--ECSSCEEEECSSSEEEEECTTTC-CE---EEEEECE
T ss_pred EEEEEEeeCCEEEEEECCcCcEEEEEeCCCC------ceEEe--eCCCEEEEECCCCeEEEEeCCCC-eE---EEEEEEc
Confidence 3444455688999999999999999886542 23444 567777755 7889999999873 22 2222211
Q ss_pred cCCC-CCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec-------------CCCEEEEEEccCCC
Q 023672 218 KEGQ-AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-------------EGGVTHVSKLSSAY 278 (279)
Q Consensus 218 ~~~~-~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~-------------~~~v~~~~~spdg~ 278 (279)
..+. -..++.+.|. ++.+++..-.+..|.+.|..+++.+..+... ..-.++||++|+++
T Consensus 144 ~~g~~~~~lNeLe~~--~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~ 216 (243)
T 3mbr_X 144 AGGRPLDNLNELEWV--NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD 216 (243)
T ss_dssp ETTEECCCEEEEEEE--TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT
T ss_pred cCCcccccceeeEEe--CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC
Confidence 1111 1245667765 4666666656789999999999999888732 13568999999764
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.86 E-value=3e-07 Score=72.51 Aligned_cols=226 Identities=10% Similarity=-0.058 Sum_probs=123.1
Q ss_pred eeeeeEecCCCCcccceeeee---eccCCCCCceEEEEEccCCCeEEEeeC--CCeEEE--EeCCCCcccccccccc---
Q 023672 33 TWPLIRFDVPPHRTYHFYNQF---RTSSIPNNFLKGIKWSPDGSSFLTSSE--DKTLRI--FSLPENGISYDVNACS--- 102 (279)
Q Consensus 33 ~~~~~~~d~~~~~~~~~~~~~---~~~~~h~~~v~~~~~~~~~~~l~t~~~--dg~i~i--wd~~~~~~~~~~~~~~--- 102 (279)
.-.+.++|..+.+........ +...+ ..-..++|+|||++|+++.. +..|.+ +|..+-... ....+.
T Consensus 95 ~~~VsviD~~T~~vv~~I~v~~~~~~~~g--~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~tv~~i-~v~~~~~~~ 171 (368)
T 1mda_H 95 TDYVEVFDPVTFLPIADIELPDAPRFSVG--PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLT-KSASCFHIH 171 (368)
T ss_dssp EEEEEEECTTTCCEEEEEEETTSCSCCBS--CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEE-ECSSCCCCE
T ss_pred CCEEEEEECCCCCEEEEEECCCccccccC--CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhhceEE-ECCCceEEc
Confidence 345788999998887632210 00001 23457899999999998875 457888 998651000 000000
Q ss_pred -------ccCCCCcccceeeecC----CCceE-------EEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCe--eeE
Q 023672 103 -------LAKDQDSYEASLVVTE----GESVY-------DFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL--LRC 162 (279)
Q Consensus 103 -------~~~~~~~~~~~~~~~~----~~~v~-------~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~--~~~ 162 (279)
.....+.....+.... .+.+. .+.-.|. + .+++..++..+. +.|.+.|+.++. .+.
T Consensus 172 p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~--~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~ 247 (368)
T 1mda_H 172 PGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA--Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKA 247 (368)
T ss_dssp EEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--E-ETTTTEEEECBS-SCCEEEECCSSCCEEEC
T ss_pred cCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--c-cccCCEEEEEcC-CEEEEEECCCCcceEEE
Confidence 0000111111111111 00000 0000111 1 334445555555 889999986543 222
Q ss_pred EEeccCc-----cccccceeeEEECCCCCEEEEe-c-C--------CeEEEEEccCCCCceeeeeecccccCCCCCceEE
Q 023672 163 TYRAYDA-----VDEITAAFSVAFNPTGTKIFAG-Y-N--------KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSA 227 (279)
Q Consensus 163 ~~~~~~~-----~~~~~~v~~~~~~~~~~~l~~~-~-d--------~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~ 227 (279)
.+..... .........+.|+|+++.++++ . . +.+.++|+.+. +....+. . ......
T Consensus 248 ~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~----~vv~~i~----v-g~~p~g 318 (368)
T 1mda_H 248 AIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVG----QTSGPIS----N-GHDSDA 318 (368)
T ss_dssp CCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSC----CEEECCE----E-EEEECE
T ss_pred EEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCC----eEEEEEE----C-CCCcce
Confidence 2221110 0000112237899999888854 3 3 36779999984 2222331 1 125789
Q ss_pred EEEccCCCc-EEEEEe-CCCcEEEEecCCCeEEEEEeecCCCEEEEEEccC
Q 023672 228 IAFSPTHTG-MLAIGS-YSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSS 276 (279)
Q Consensus 228 ~~~sp~~~~-~l~~~~-~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spd 276 (279)
++|+| ++. ++++.. .++.|.++|+.+++.+.++..... ..++++.+.
T Consensus 319 i~~s~-Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~-P~~i~~~~~ 367 (368)
T 1mda_H 319 IIAAQ-DGASDNYANSAGTEVLDIYDAASDQDQSSVELDKG-PESLSVQNE 367 (368)
T ss_dssp EEECC-SSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSC-CCEEECCCC
T ss_pred EEECC-CCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCC-CCEEEeecC
Confidence 99999 665 666666 599999999999999999886544 467777654
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.86 E-value=8.5e-10 Score=87.62 Aligned_cols=148 Identities=16% Similarity=0.160 Sum_probs=77.4
Q ss_pred CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcE
Q 023672 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (279)
Q Consensus 71 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i 150 (279)
++..+++++.||.|..||..+++....... ..+.+. .+..++..+++++.|+.|
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-------------------~~~~s~-------p~~~~g~~~v~~s~dg~l 61 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE-------------------DPVLQV-------PTHVEEPAFLPDPNDGSL 61 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC-------------------CCSCCC-------C-----CCEEECTTTCCE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC-------------------CCceec-------ceEcCCCEEEEeCCCCEE
Confidence 567899999999999999998865332111 111111 123466678888899999
Q ss_pred EEEECCCCeeeEEEeccCcccccccee-eEEECCCCCEEEE-ecCCeEEEEEccCCCCceeeeeecccccCCCCCceEEE
Q 023672 151 HLWDATTGLLRCTYRAYDAVDEITAAF-SVAFNPTGTKIFA-GYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAI 228 (279)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~-~~~~~~~~~~l~~-~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 228 (279)
+.||..+|+.+..+..+... .+. +..+..++ .+++ +.++.++.||..++.. ...+ ..+. ..
T Consensus 62 ~a~d~~tG~~~w~~~~~~~~----~~~~sp~~~~~~-~v~~g~~dg~v~a~D~~tG~~----~w~~----~~~~----~~ 124 (369)
T 2hz6_A 62 YTLGSKNNEGLTKLPFTIPE----LVQASPCRSSDG-ILYMGKKQDIWYVIDLLTGEK----QQTL----SSAF----AD 124 (369)
T ss_dssp EEC-----CCSEECSCCHHH----HHTTCSCC------CCCCEEEEEEEEECCC--------------------------
T ss_pred EEEECCCCceeeeeeccCcc----ccccCceEecCC-EEEEEeCCCEEEEEECCCCcE----EEEe----cCCC----cc
Confidence 99999999877666543210 111 11111233 4454 4889999999998522 2222 1111 23
Q ss_pred EEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe
Q 023672 229 AFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (279)
Q Consensus 229 ~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 262 (279)
.++| ++..+++++.|+.|+.||.++++.+..+.
T Consensus 125 ~~~p-~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 125 SLSP-STSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp ---------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred cccc-cCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 5667 77788889999999999999998765443
No 238
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.84 E-value=1.4e-06 Score=64.51 Aligned_cols=172 Identities=8% Similarity=0.023 Sum_probs=102.1
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEee-CCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+..+|+.+++...... + ..........+++..|.... .++.+.+||..+.+.....
T Consensus 66 ~v~~vD~~Tgkv~~~~~----l---~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti--------------- 123 (262)
T 3nol_A 66 SIRKVDIESGKTLQQIE----L---GKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSF--------------- 123 (262)
T ss_dssp EEEEECTTTCCEEEEEE----C---CTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEE---------------
T ss_pred eEEEEECCCCcEEEEEe----c---CCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEE---------------
Confidence 46778888888765322 1 12344443444555665554 4889999999876543221
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-c
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 192 (279)
.+.+....+.+++..|+.+..++.|.++|..+.+.+..+...........++.+.|. +|+..+.. .
T Consensus 124 ------------~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~ 190 (262)
T 3nol_A 124 ------------NYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQ 190 (262)
T ss_dssp ------------ECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred ------------ECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEcc
Confidence 111111233446777777777888999999999988887764321111234457776 67655555 7
Q ss_pred CCeEEEEEccCCCCceeeeee--cccc---cCCCCCceEEEEEccCCCcEEEEEe
Q 023672 193 NKSVRVFDVHRPGRDFEKYST--LKGN---KEGQAGIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 193 d~~i~~~d~~~~~~~~~~~~~--~~~~---~~~~~~~v~~~~~sp~~~~~l~~~~ 242 (279)
+..|.+.|..++ +....+.. +... ......-.+.|+|+|+...++++|-
T Consensus 191 ~~~I~vIDp~tG-~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK 244 (262)
T 3nol_A 191 TNKIVRIDPETG-KVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGK 244 (262)
T ss_dssp SSEEEEECTTTC-BEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCC-cEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECC
Confidence 889999999984 33332221 1100 0111245689999995555555553
No 239
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.83 E-value=7.5e-08 Score=75.66 Aligned_cols=147 Identities=12% Similarity=0.034 Sum_probs=91.1
Q ss_pred CcccccCCCCcEEEEec--CCCcEEEEECCCCeeeEEEecc--CccccccceeeEEECCCCCEEEEe-c-----CCeEEE
Q 023672 129 PHMSASDPTSCVFASTT--RDHPIHLWDATTGLLRCTYRAY--DAVDEITAAFSVAFNPTGTKIFAG-Y-----NKSVRV 198 (279)
Q Consensus 129 ~~~~~~~~~~~~l~s~~--~d~~i~i~d~~~~~~~~~~~~~--~~~~~~~~v~~~~~~~~~~~l~~~-~-----d~~i~~ 198 (279)
|..++++++|+++++.. .++.++||.+.+++. ..+... ....+...+..++++++++++++. . ++.|.+
T Consensus 19 p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~ 97 (343)
T 2qe8_A 19 PGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLVA 97 (343)
T ss_dssp EEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEEE
T ss_pred cceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEEE
Confidence 34456688999888863 234355555545543 222211 111223478899999999877654 3 689999
Q ss_pred EEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEe---CCCcEEEEecCCCeEEEEEeecC----------
Q 023672 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS---YSQTSAIYREDNMELLYVLHGQE---------- 265 (279)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~---~dg~i~~wd~~~~~~~~~~~~~~---------- 265 (279)
||+.++ +....+ .+......+...+..++++|+++..+++.. .++.|.+||+.+++....+.+|.
T Consensus 98 ~d~~tg-~~~~~~-~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~ 175 (343)
T 2qe8_A 98 WDTLNN-QLSRVI-YLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLV 175 (343)
T ss_dssp EETTTT-EEEEEE-ECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCE
T ss_pred EECCCC-eEEEEE-ECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCccccccccee
Confidence 999873 222211 111111223345789999984566666665 67889999998887665553321
Q ss_pred -------------------CCEEEEEEccCCC
Q 023672 266 -------------------GGVTHVSKLSSAY 278 (279)
Q Consensus 266 -------------------~~v~~~~~spdg~ 278 (279)
..+.+|+|+|||+
T Consensus 176 ~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~ 207 (343)
T 2qe8_A 176 IDGVPVQIGQPDGTVIRPHLGVNGIVLDAENE 207 (343)
T ss_dssp ETTEECBEECTTSCEECCCCCEEEEEECTTSC
T ss_pred ECCEEEEeccCCCceeceecccceeEeccCCC
Confidence 2368899999996
No 240
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.76 E-value=2.4e-05 Score=58.97 Aligned_cols=178 Identities=11% Similarity=0.053 Sum_probs=107.4
Q ss_pred CceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
....++++++++..|+ +-...+.|.+++++..... .+...... .|..++++|++.
T Consensus 79 ~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~-----------------~~~~~~~~-------~P~~i~vd~~~g 134 (267)
T 1npe_A 79 GSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRR-----------------VLFDTGLV-------NPRGIVTDPVRG 134 (267)
T ss_dssp CCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------------EEECSSCS-------SEEEEEEETTTT
T ss_pred CCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEE-----------------EEEECCCC-------CccEEEEeeCCC
Confidence 4578999999765555 4455778999988642110 01000111 233345577555
Q ss_pred EEEEecC---CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeec
Q 023672 140 VFASTTR---DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 140 ~l~s~~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
.|+.+.. .+.|..+++... ....+.... ......++++|++..|+ +. ..+.|.++|+... . . ..+
T Consensus 135 ~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~~----~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~-~-~---~~~ 204 (267)
T 1npe_A 135 NLYWTDWNRDNPKIETSHMDGT-NRRILAQDN----LGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQP-G-R---RKV 204 (267)
T ss_dssp EEEEEECCSSSCEEEEEETTSC-CCEEEECTT----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTEE-E-E---EEE
T ss_pred EEEEEECCCCCcEEEEEecCCC-CcEEEEECC----CCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCC-c-e---EEE
Confidence 5554443 367888887643 233332111 11567899999887776 44 6789999999742 1 1 111
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecC-CCEEEEEEccCCC
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQE-GGVTHVSKLSSAY 278 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~-~~v~~~~~spdg~ 278 (279)
. .. ......++.. ++.++++...++.|..+|..+++.+..+.... ....++++.|++.
T Consensus 205 ~---~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~~~p~gi~~~~~~~ 263 (267)
T 1npe_A 205 L---EG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQTRLYGITIALSQC 263 (267)
T ss_dssp E---EC-CCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSCCCCCCEEEECSCC
T ss_pred e---cC-CCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccccccceeeecCccC
Confidence 1 11 1224556553 45566666667899999999999888887543 2478899999874
No 241
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.70 E-value=6e-06 Score=60.62 Aligned_cols=172 Identities=9% Similarity=0.060 Sum_probs=101.5
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccce
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEAS 113 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (279)
.+..+|+.+++...... +. .........+.+..|. ..-.++.+.+||..+.+.....
T Consensus 44 ~v~~vD~~tgkv~~~~~----l~---~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti--------------- 101 (243)
T 3mbr_X 44 SVRKVDLETGRILQRAE----VP---PPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARF--------------- 101 (243)
T ss_dssp EEEEEETTTCCEEEEEE----CC---TTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEE---------------
T ss_pred eEEEEECCCCCEEEEEe----CC---CCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEE---------------
Confidence 46778888888765322 11 1233333334455555 4445889999999876543221
Q ss_pred eeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-c
Q 023672 114 LVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y 192 (279)
Q Consensus 114 ~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~ 192 (279)
... ..=..+ .+++..|+.+..++.|.++|..+.+.+..+...........++-+.+. +|+.++.. .
T Consensus 102 -~~~--~~Gwgl---------t~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~ 168 (243)
T 3mbr_X 102 -RYP--GEGWAL---------TSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWL 168 (243)
T ss_dssp -ECS--SCCCEE---------EECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETT
T ss_pred -eCC--CCceEE---------eeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECC
Confidence 111 111222 336667777777889999999999988888765432222244556665 66655544 7
Q ss_pred CCeEEEEEccCCCCceeeeee--ccccc----CCCCCceEEEEEccCCCcEEEEEe
Q 023672 193 NKSVRVFDVHRPGRDFEKYST--LKGNK----EGQAGIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 193 d~~i~~~d~~~~~~~~~~~~~--~~~~~----~~~~~~v~~~~~sp~~~~~l~~~~ 242 (279)
+..|.+.|..++ +....+.. +.... .....-.+.|+++|+...++++|-
T Consensus 169 s~~I~vIDp~tG-~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 169 TSRIARIDPASG-KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTEEEEECTTTC-BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCeEEEEECCCC-CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 889999999984 33332211 11100 012245789999995566666663
No 242
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.67 E-value=3.2e-06 Score=65.64 Aligned_cols=124 Identities=10% Similarity=0.037 Sum_probs=78.8
Q ss_pred cCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeee
Q 023672 134 SDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYST 213 (279)
Q Consensus 134 ~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~ 213 (279)
..+++.+.+ ++ +.|..+| .+++.......... .+.++...+++.+.+++.++.+..+|.. +.... .
T Consensus 184 ~d~~g~l~v-~t--~~l~~~d-~~g~~~~~~~~~~~-----~~~~~~~~~~g~l~v~t~~~gl~~~~~~--g~~~~---~ 249 (330)
T 3hxj_A 184 IGKDGTIYF-GS--DKVYAIN-PDGTEKWNFYAGYW-----TVTRPAISEDGTIYVTSLDGHLYAINPD--GTEKW---R 249 (330)
T ss_dssp ECTTCCEEE-ES--SSEEEEC-TTSCEEEEECCSSC-----CCSCCEECTTSCEEEEETTTEEEEECTT--SCEEE---E
T ss_pred EcCCCEEEE-Ee--CEEEEEC-CCCcEEEEEccCCc-----ceeceEECCCCeEEEEcCCCeEEEECCC--CCEeE---E
Confidence 345665444 44 7799999 77777666654433 6778889998877777778888888753 22222 2
Q ss_pred cccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
.. .....+.++...+ ++ .|..++.+|.|..+|. +++.+..+......+.++...++|+
T Consensus 250 ~~----~~~~~~~~~~~~~-~g-~l~v~t~~ggl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~ 307 (330)
T 3hxj_A 250 FK----TGKRIESSPVIGN-TD-TIYFGSYDGHLYAINP-DGTEKWNFETGSWIIATPVIDENGT 307 (330)
T ss_dssp EE----CSSCCCSCCEECT-TS-CEEEECTTCEEEEECT-TSCEEEEEECSSCCCSCCEECTTCC
T ss_pred ee----CCCCccccceEcC-CC-eEEEecCCCCEEEECC-CCcEEEEEEcCCccccceEEcCCCE
Confidence 21 1122233455555 55 5666777888999995 7777776665555566666666654
No 243
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.61 E-value=1.2e-05 Score=62.38 Aligned_cols=196 Identities=12% Similarity=0.076 Sum_probs=103.4
Q ss_pred ceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccC---CCCcccceeeecCCCceEEEEeeCcccccCC-C
Q 023672 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAK---DQDSYEASLVVTEGESVYDFCWFPHMSASDP-T 137 (279)
Q Consensus 62 ~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~ 137 (279)
...+++|++++++++++..++.|..|+..++....-........ ....... ...........+ ++++ +
T Consensus 20 ~p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~p~gi-------~~~~~~ 91 (322)
T 2fp8_A 20 APNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDA-EKRPLCGRTYDI-------SYNLQN 91 (322)
T ss_dssp CCCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCG-GGHHHHCCEEEE-------EEETTT
T ss_pred CceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccch-hccccCCCCceE-------EEcCCC
Confidence 35678899999878888889999999887543211000000000 0000000 000001123334 4465 5
Q ss_pred CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECC-CCCEEEEe-c-----------------CCeEEE
Q 023672 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNP-TGTKIFAG-Y-----------------NKSVRV 198 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~l~~~-~-----------------d~~i~~ 198 (279)
++ |+.+...+.|..+|..++... .+...........+..+++.+ +|+++++. . ++.|..
T Consensus 92 g~-l~v~d~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~ 169 (322)
T 2fp8_A 92 NQ-LYIVDCYYHLSVVGSEGGHAT-QLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIK 169 (322)
T ss_dssp TE-EEEEETTTEEEEECTTCEECE-EEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEE
T ss_pred Cc-EEEEECCCCEEEEeCCCCEEE-EecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEE
Confidence 54 444444455888887765432 222111101112467899999 89877753 2 267888
Q ss_pred EEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcE-EEEEeCCCcEEEEecCCCe--EEEEEeecCCCEEEEEEcc
Q 023672 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGM-LAIGSYSQTSAIYREDNME--LLYVLHGQEGGVTHVSKLS 275 (279)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~-l~~~~~dg~i~~wd~~~~~--~~~~~~~~~~~v~~~~~sp 275 (279)
||..++ . ... +.. .......++++| ++.. +++-..++.|..|++.... ....+....+ ...+++.+
T Consensus 170 ~d~~~~-~-~~~---~~~----~~~~p~gia~~~-dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~ 238 (322)
T 2fp8_A 170 YDPSTK-E-TTL---LLK----ELHVPGGAEVSA-DSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNA 238 (322)
T ss_dssp EETTTT-E-EEE---EEE----EESCCCEEEECT-TSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECT
T ss_pred EeCCCC-E-EEE---ecc----CCccCcceEECC-CCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCCC-CCCeEECC
Confidence 887652 1 111 110 012356799999 7764 4554667889999987421 1122222223 67788888
Q ss_pred CCC
Q 023672 276 SAY 278 (279)
Q Consensus 276 dg~ 278 (279)
+|+
T Consensus 239 ~G~ 241 (322)
T 2fp8_A 239 DGH 241 (322)
T ss_dssp TSC
T ss_pred CCC
Confidence 875
No 244
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=98.55 E-value=5.8e-06 Score=71.82 Aligned_cols=162 Identities=9% Similarity=0.060 Sum_probs=93.5
Q ss_pred CCCC-ceEEEEEc-cCCCeEEEeeC-C----CeEEEEeCCCC-ccccccccccccCCCCcccceeeecCCCceEEEEeeC
Q 023672 58 IPNN-FLKGIKWS-PDGSSFLTSSE-D----KTLRIFSLPEN-GISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP 129 (279)
Q Consensus 58 ~h~~-~v~~~~~~-~~~~~l~t~~~-d----g~i~iwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ 129 (279)
+|.- .+...+|| |||++||.+.. + ..|+++|+.++ ..... .+.. ..
T Consensus 170 ~~~~~~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-----------------------~~~~---~~ 223 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-----------------------KVSG---TN 223 (751)
T ss_dssp TCSCCEEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-----------------------CEEE---EC
T ss_pred CCCeEEEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-----------------------cccC---ce
Confidence 4443 67889999 99998884432 2 35999999876 32100 0100 01
Q ss_pred cccccCCCCcEEEEecCC-----CcEEEEECCCCeee--EEEeccCccccccceeeEEECCCCCEEE-Ee---cCCeEEE
Q 023672 130 HMSASDPTSCVFASTTRD-----HPIHLWDATTGLLR--CTYRAYDAVDEITAAFSVAFNPTGTKIF-AG---YNKSVRV 198 (279)
Q Consensus 130 ~~~~~~~~~~~l~s~~~d-----~~i~i~d~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~---~d~~i~~ 198 (279)
..++|+||++.|+....+ ..|.++++.++... ..+..... .....+.|+|||++|+ +. ....|++
T Consensus 224 ~~~~WspDg~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~----~~~~~~~~SpDg~~l~~~~~~~~~~~l~~ 299 (751)
T 2xe4_A 224 GEIVWGPDHTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHNP----LFSAFMYKAADTNTLCIGSQSPETAEVHL 299 (751)
T ss_dssp SCCEECSSTTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCCT----TCEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred eeEEEecCCCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCCC----ceEEEEEECCCCCEEEEEecCCCCceEEE
Confidence 123458888877776654 25888888776422 22222111 1345789999999888 33 2456888
Q ss_pred EEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC--C--cEEEEecCC
Q 023672 199 FDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS--Q--TSAIYREDN 254 (279)
Q Consensus 199 ~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d--g--~i~~wd~~~ 254 (279)
+|+.++..... ...+. ........++.|+. ++.+++....+ + .|..+|+.+
T Consensus 300 ~d~~~~~~~~~-~~~l~---~~~~~~~~s~~~~~-g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 300 LDLRKGNAHNT-LEIVR---PREKGVRYDVQMHG-TSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp EESSSCTTCCC-EEESS---CCCTTCCEEEEEET-TTEEEEEECTTTCTTCEEEEEETTS
T ss_pred EECCCCCCCce-eEEee---cCCCCceEEEeeee-CCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 89876421220 01111 22334556666665 66666665544 2 566677664
No 245
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.53 E-value=8.4e-06 Score=67.44 Aligned_cols=171 Identities=12% Similarity=0.065 Sum_probs=105.2
Q ss_pred cCCCeEEEeeC-CCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccC-CCCcEEEEec--
Q 023672 70 PDGSSFLTSSE-DKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASD-PTSCVFASTT-- 145 (279)
Q Consensus 70 ~~~~~l~t~~~-dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~-~~~~~l~s~~-- 145 (279)
+||++|+.... ++.|.+.|+.+.+.... +....+.....+.+ .+ |++.++++++
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~i----------------i~ip~g~~phg~~~------~~~p~~~~v~~~~~~ 156 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAI----------------LEIPNAKGIHGLRP------QKWPRSNYVFCNGED 156 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEE----------------EECSSCCSEEEEEE------CCSSBCSEEEEEECS
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeE----------------EeCCCCCCCcceee------eecCCCcEEEEeccc
Confidence 38887776554 66799999998654321 11122222333322 13 6777776663
Q ss_pred ----------------CCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE-ecCC--------------
Q 023672 146 ----------------RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNK-------------- 194 (279)
Q Consensus 146 ----------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d~-------------- 194 (279)
.++.+.++|..+.+....+.... ....++++|+|+++++ +.+.
T Consensus 157 ~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg------~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~ 230 (595)
T 1fwx_A 157 ETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG------NLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEM 230 (595)
T ss_dssp CEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS------CCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSE
T ss_pred ccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC------CccceEECCCCCEEEEEecCcccCcchhhcccccc
Confidence 34579999999999888887654 2346889999999984 4221
Q ss_pred ------------------------eEEEEEccCCCCceee-eeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEE
Q 023672 195 ------------------------SVRVFDVHRPGRDFEK-YSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSA 248 (279)
Q Consensus 195 ------------------------~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~ 248 (279)
.|.+.|.++... .. ...+.. .....++.++| +|. +++++..+.+|.
T Consensus 231 d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~--~~~~~~Ipv-----g~~PhGv~~sP-DGk~v~V~~~~s~~Vs 302 (595)
T 1fwx_A 231 DHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS--SLFTRYIPI-----ANNPHGCNMAP-DKKHLCVAGKLSPTVT 302 (595)
T ss_dssp EEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGC--CSSEEEEEE-----ESSCCCEEECT-TSSEEEEECTTSSBEE
T ss_pred ceEEEeeccceeEeccCCCeeEECcEEEEeCcccCC--ceeEEEEec-----CCCceEEEEcC-CCCEEEEeCCCCCeEE
Confidence 244555543100 01 111110 12356789999 665 455556788999
Q ss_pred EEecCCCe------------EEEEEeecCCCEEEEEEccCC
Q 023672 249 IYREDNME------------LLYVLHGQEGGVTHVSKLSSA 277 (279)
Q Consensus 249 ~wd~~~~~------------~~~~~~~~~~~v~~~~~spdg 277 (279)
++|+.+.+ .+..+. -....+.++|+|||
T Consensus 303 Vid~~~~~~~~~~~l~~~~~v~~~v~-vG~gP~h~aF~~dG 342 (595)
T 1fwx_A 303 VLDVTRFDAVFYENADPRSAVVAEPE-LGLGPLHTAFDGRG 342 (595)
T ss_dssp EEEGGGHHHHHHSCCCGGGGEEECCB-CCSCEEEEEECTTS
T ss_pred EEECcccccccccccCcccceEEEcC-CCCCcceEEECCCC
Confidence 99998653 334443 23467999999998
No 246
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.46 E-value=6.8e-06 Score=70.35 Aligned_cols=176 Identities=13% Similarity=0.153 Sum_probs=103.0
Q ss_pred EEEEEccCCCeEEEeeCCCe-------------------EEEEeCCCCccccccccccccCCCCcccceeeecCCCceEE
Q 023672 64 KGIKWSPDGSSFLTSSEDKT-------------------LRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYD 124 (279)
Q Consensus 64 ~~~~~~~~~~~l~t~~~dg~-------------------i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 124 (279)
..++++|+...++.++.++. |..+|..+++......... ++... .....+...
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~----~~~wd----~~~~~~~~~ 304 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTP----GDSWD----FTATQQITL 304 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESST----TCCSC----CCCCSCEEE
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCC----Ccccc----ccCCCCcEE
Confidence 35788888888888877763 8888888876543321110 00000 000011111
Q ss_pred EEeeCcccccCCCCc---EEEEecCCCcEEEEECCCCeeeEEEeccCcc-----c--cccc-------------------
Q 023672 125 FCWFPHMSASDPTSC---VFASTTRDHPIHLWDATTGLLRCTYRAYDAV-----D--EITA------------------- 175 (279)
Q Consensus 125 ~~~~~~~~~~~~~~~---~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~-----~--~~~~------------------- 175 (279)
.. +..+++ .++.++.+|.+.++|..+|+.+...+..... + ...+
T Consensus 305 ~d-------~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~ 377 (668)
T 1kv9_A 305 AE-------LNIDGKPRKVLMQAPKNGFFYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSP 377 (668)
T ss_dssp EE-------EEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCT
T ss_pred EE-------eccCCcEEEEEEEECCCCEEEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCC
Confidence 10 011443 6888999999999999999987554332200 0 0000
Q ss_pred -----eeeEEECCCCCEEEEe-------------------------------------cCCeEEEEEccCCCCceeeeee
Q 023672 176 -----AFSVAFNPTGTKIFAG-------------------------------------YNKSVRVFDVHRPGRDFEKYST 213 (279)
Q Consensus 176 -----v~~~~~~~~~~~l~~~-------------------------------------~d~~i~~~d~~~~~~~~~~~~~ 213 (279)
-..++++|+...+++. .++.|..||+.++. ....
T Consensus 378 ~G~~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~----~~W~ 453 (668)
T 1kv9_A 378 FGAHNWHSMSFNPGTGLVYIPYQEVPGVYRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQK----AAWK 453 (668)
T ss_dssp TCSSCSSCCEEETTTTEEEEEEEECCEEECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTE----EEEE
T ss_pred ccccCCCcceECCCCCEEEEeccccceEeeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCc----EEEE
Confidence 0126777776655531 23779999998852 2222
Q ss_pred cccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec
Q 023672 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ 264 (279)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 264 (279)
... ........+.. .+.+++.++.|+.++.||.++++.+..+...
T Consensus 454 ~~~-----~~~~~~~~~~t-~gg~vf~g~~dg~l~a~d~~tG~~l~~~~~~ 498 (668)
T 1kv9_A 454 VPY-----PTHWNGGTLST-AGNLVFQGTAAGQMHAYSADKGEALWQFEAQ 498 (668)
T ss_dssp EEE-----SSSCCCCEEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccC-----CCCCcCceeEe-CCCEEEEECCcccchhhhhhcChhheEecCC
Confidence 211 11222334445 5678888999999999999999999888754
No 247
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.44 E-value=3.8e-06 Score=65.23 Aligned_cols=119 Identities=11% Similarity=0.027 Sum_probs=72.5
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeeccccc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 218 (279)
..+..++.++.|..+|.. ++.......... .+.++...+++.+++++.++.|..+|.. + .... ...
T Consensus 108 ~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~-----~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g-~~~~---~~~--- 173 (330)
T 3hxj_A 108 DILYVTSMDGHLYAINTD-GTEKWRFKTKKA-----IYATPIVSEDGTIYVGSNDNYLYAINPD-G-TEKW---RFK--- 173 (330)
T ss_dssp TEEEEECTTSEEEEECTT-SCEEEEEECSSC-----CCSCCEECTTSCEEEECTTSEEEEECTT-S-CEEE---EEE---
T ss_pred CEEEEEecCCEEEEEcCC-CCEEEEEcCCCc-----eeeeeEEcCCCEEEEEcCCCEEEEECCC-C-CEeE---EEe---
Confidence 356667778888888887 766655554332 4556677777776666577888888887 3 2111 111
Q ss_pred CCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCC
Q 023672 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSA 277 (279)
Q Consensus 219 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg 277 (279)
.....+.++...+ ++.+++. + +.|..+| .+++.+.........+.++...++|
T Consensus 174 -~~~~~~~~~~~d~-~g~l~v~-t--~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g 226 (330)
T 3hxj_A 174 -TNDAITSAASIGK-DGTIYFG-S--DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDG 226 (330)
T ss_dssp -CSSCCCSCCEECT-TCCEEEE-S--SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTS
T ss_pred -cCCCceeeeEEcC-CCEEEEE-e--CEEEEEC-CCCcEEEEEccCCcceeceEECCCC
Confidence 1123455566666 5554443 3 6688888 6776666555444456666666665
No 248
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.39 E-value=4.8e-05 Score=65.27 Aligned_cols=153 Identities=9% Similarity=0.133 Sum_probs=91.1
Q ss_pred eeEecCCCCcccceeeeeeccCCCC-------CceEEEEEccCC---CeEEEeeCCCeEEEEeCCCCccccccccccccC
Q 023672 36 LIRFDVPPHRTYHFYNQFRTSSIPN-------NFLKGIKWSPDG---SSFLTSSEDKTLRIFSLPENGISYDVNACSLAK 105 (279)
Q Consensus 36 ~~~~d~~~~~~~~~~~~~~~~~~h~-------~~v~~~~~~~~~---~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 105 (279)
+..+|..+++....++. ..|. .....+....+| ..|+.++.+|.+.++|..+++..........
T Consensus 285 v~AlD~~TG~~~W~~~~----~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~-- 358 (677)
T 1kb0_A 285 IVALDPDTGKYKWHYQE----TPGDNWDYTSTQPMILADIKIAGKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPV-- 358 (677)
T ss_dssp EEEECTTTCCEEEEEES----STTCCSCCCCCSCCEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCC--
T ss_pred EEEEECCCCCEEEEEec----CCCcccccccCCCcEEEecccCCcEeeEEEEECCCCEEEEEECCCCCEecccccccc--
Confidence 67778888887654332 1121 122233444477 6789999999999999999877543321110
Q ss_pred CCCcccceeeecCCCceE---------EEEeeC--------cccccCCCCcEEEEecC----------------------
Q 023672 106 DQDSYEASLVVTEGESVY---------DFCWFP--------HMSASDPTSCVFASTTR---------------------- 146 (279)
Q Consensus 106 ~~~~~~~~~~~~~~~~v~---------~~~~~~--------~~~~~~~~~~~l~s~~~---------------------- 146 (279)
.....+. ..+.++. .....| ..++++|++.++++...
T Consensus 359 ---~~~~~~d-~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~ 434 (677)
T 1kb0_A 359 ---NWASGYD-KHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKP 434 (677)
T ss_dssp ---SSEEEEC-TTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTST
T ss_pred ---CcccccC-CCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeeccccccccccccccc
Confidence 0000000 0011110 000011 12456777777666432
Q ss_pred ---------------------CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCC
Q 023672 147 ---------------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (279)
Q Consensus 147 ---------------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~ 204 (279)
.+.|..||+.+++.+..+.... ++....+...+..++.+ .|+.+++||.+++
T Consensus 435 ~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~------~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG 508 (677)
T 1kb0_A 435 QSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS------PWNGGTLTTAGNVVFQGTADGRLVAYHAATG 508 (677)
T ss_dssp TGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS------SCCCCEEEETTTEEEEECTTSEEEEEETTTC
T ss_pred ccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC------CCcCcceEeCCCEEEEECCCCcEEEEECCCC
Confidence 2779999999999988887543 34455666677777766 9999999999985
No 249
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.37 E-value=0.00024 Score=54.65 Aligned_cols=185 Identities=10% Similarity=0.040 Sum_probs=101.7
Q ss_pred CceEEEEEccCCCeEEEeeC-CC-eEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 61 NFLKGIKWSPDGSSFLTSSE-DK-TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~-dg-~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
+...+++++++++++++... ++ .|..++..++..... ...........++ ..+++
T Consensus 72 ~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~----------------~~~~~~~~~~g~~-------~~~~~ 128 (306)
T 2p4o_A 72 GKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETL----------------LTLPDAIFLNGIT-------PLSDT 128 (306)
T ss_dssp SEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEE----------------EECTTCSCEEEEE-------ESSSS
T ss_pred CCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEE----------------EeCCCccccCccc-------ccCCC
Confidence 45889999999986555433 22 466667665532110 0000111111121 13344
Q ss_pred cEEEEecCCCcEEEEECCCCee-eEEEecc----CccccccceeeEEECCCCCEEEEe--cCCeEEEEEccCCCCceeee
Q 023672 139 CVFASTTRDHPIHLWDATTGLL-RCTYRAY----DAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKY 211 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~-~~~~~~~----~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~~~d~~~~~~~~~~~ 211 (279)
..+++-..++.|..+|..+++. +...... ...........+ +|+++.|+.+ ..+.|..||+...+. ....
T Consensus 129 ~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~-~~~~ 205 (306)
T 2p4o_A 129 QYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDK-PGEP 205 (306)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSC-BCCC
T ss_pred cEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCC-CCcc
Confidence 4455555678898899876532 1111100 000111134455 7888777643 678999999975221 1111
Q ss_pred eecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEE--EEeecCCCEEEEEEc---cCCC
Q 023672 212 STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLY--VLHGQEGGVTHVSKL---SSAY 278 (279)
Q Consensus 212 ~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~--~~~~~~~~v~~~~~s---pdg~ 278 (279)
..+.. ......+++++ +|.++++....+.|.++|.. ++... .+......+++++|. ||++
T Consensus 206 ~~~~~-----~~~P~gi~vd~-dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~p~~~a~~g~~~d~~ 270 (306)
T 2p4o_A 206 EIFVE-----QTNIDDFAFDV-EGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIGSTAVAFGQTEGDCT 270 (306)
T ss_dssp EEEEE-----SCCCSSEEEBT-TCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTTEEEEEECCSTTTTT
T ss_pred EEEec-----cCCCCCeEECC-CCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCCceEEEEecccCCCC
Confidence 11110 12356789999 88887777778889999975 65532 222223568999998 8865
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.36 E-value=0.0003 Score=54.47 Aligned_cols=175 Identities=9% Similarity=0.046 Sum_probs=100.6
Q ss_pred ceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCC-CCc
Q 023672 62 FLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-TSC 139 (279)
Q Consensus 62 ~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~ 139 (279)
...++++.+ +++ |+.+...+.|..+|..++....... . ........... +++.+ +|+
T Consensus 81 ~p~gi~~~~~~g~-l~v~d~~~~i~~~d~~~g~~~~~~~-~------------~~~~~~~~p~~-------i~~d~~~G~ 139 (322)
T 2fp8_A 81 RTYDISYNLQNNQ-LYIVDCYYHLSVVGSEGGHATQLAT-S------------VDGVPFKWLYA-------VTVDQRTGI 139 (322)
T ss_dssp CEEEEEEETTTTE-EEEEETTTEEEEECTTCEECEEEES-E------------ETTEECSCEEE-------EEECTTTCC
T ss_pred CCceEEEcCCCCc-EEEEECCCCEEEEeCCCCEEEEecc-c------------CCCCcccccce-------EEEecCCCE
Confidence 578999998 665 5555445558888876442210000 0 00000011223 35577 777
Q ss_pred EEEEecC-----------------CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe--cCCeEEEEE
Q 023672 140 VFASTTR-----------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFD 200 (279)
Q Consensus 140 ~l~s~~~-----------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~~~d 200 (279)
+.++-.. ++.|..+|..+++......... ....++|+|+++.|+.+ ..+.|.+|+
T Consensus 140 l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~------~p~gia~~~dg~~lyv~d~~~~~I~~~~ 213 (322)
T 2fp8_A 140 VYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELH------VPGGAEVSADSSFVLVAEFLSHQIVKYW 213 (322)
T ss_dssp EEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEES------CCCEEEECTTSSEEEEEEGGGTEEEEEE
T ss_pred EEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCc------cCcceEECCCCCEEEEEeCCCCeEEEEE
Confidence 6665432 3678888987776433322111 45689999999876643 668999999
Q ss_pred ccCCCC-ceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC----------CCcEEEEecCCCeEEEEEeecC----
Q 023672 201 VHRPGR-DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY----------SQTSAIYREDNMELLYVLHGQE---- 265 (279)
Q Consensus 201 ~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~----------dg~i~~wd~~~~~~~~~~~~~~---- 265 (279)
+..... ....+.. . .+ ...+++++ +|.++++... .+.|..+|. .++.+..+....
T Consensus 214 ~~~~~~~~~~~~~~----~---~g-P~gi~~d~-~G~l~va~~~~~~~~~~~~~~~~v~~~d~-~G~~~~~~~~~~g~~~ 283 (322)
T 2fp8_A 214 LEGPKKGTAEVLVK----I---PN-PGNIKRNA-DGHFWVSSSEELDGNMHGRVDPKGIKFDE-FGNILEVIPLPPPFAG 283 (322)
T ss_dssp SSSTTTTCEEEEEE----C---SS-EEEEEECT-TSCEEEEEEEETTSSTTSCEEEEEEEECT-TSCEEEEEECCTTTTT
T ss_pred CCCCcCCccceEEe----C---CC-CCCeEECC-CCCEEEEecCcccccccCCCccEEEEECC-CCCEEEEEECCCCCcc
Confidence 875211 1111111 1 12 67899999 7777766544 466888886 577777666442
Q ss_pred CCEEEEEE
Q 023672 266 GGVTHVSK 273 (279)
Q Consensus 266 ~~v~~~~~ 273 (279)
..++++++
T Consensus 284 ~~~~~~~~ 291 (322)
T 2fp8_A 284 EHFEQIQE 291 (322)
T ss_dssp SCCCEEEE
T ss_pred ccceEEEE
Confidence 24555555
No 251
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=98.36 E-value=0.00062 Score=55.09 Aligned_cols=145 Identities=14% Similarity=0.108 Sum_probs=86.7
Q ss_pred eCcccccCC-CCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCC
Q 023672 128 FPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRP 204 (279)
Q Consensus 128 ~~~~~~~~~-~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~ 204 (279)
.|..++++| ++.+.++-..++.|+.+|..++.....+...... .....++|+|+++.|+ +- ..+.|+.+++...
T Consensus 229 ~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~---~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~~ 305 (433)
T 4hw6_A 229 GAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTK---GSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNRE 305 (433)
T ss_dssp SBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCC---SSCEEEEECTTSSEEEEEETTTTEEEEEEBCTT
T ss_pred CCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCC---CCcccEEEeCCCCEEEEEeCCCCEEEEEeCCCC
Confidence 466677888 6666666666788999999877653333222111 1234699999999666 44 6789999887632
Q ss_pred CCceeeeeecccc--cC---------CCCCceEEEEE---------ccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec
Q 023672 205 GRDFEKYSTLKGN--KE---------GQAGIMSAIAF---------SPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ 264 (279)
Q Consensus 205 ~~~~~~~~~~~~~--~~---------~~~~~v~~~~~---------sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 264 (279)
...+.....+... .. ..-.....+++ .+ ++.++++-..++.|+.++. ++.. .++.+.
T Consensus 306 ~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~-~g~lyvaD~~n~~I~~~~~-~G~v-~t~~G~ 382 (433)
T 4hw6_A 306 TGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEED-EYDFYFCDRDSHTVRVLTP-EGRV-TTYAGR 382 (433)
T ss_dssp TCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSC-CEEEEEEETTTTEEEEECT-TSEE-EEEECC
T ss_pred CcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCC-CCcEEEEECCCCEEEEECC-CCCE-EEEEeC
Confidence 1111100111100 00 11224667899 66 7778888777888999985 5643 333321
Q ss_pred ------------------CCCEEEEEEc-cCCC
Q 023672 265 ------------------EGGVTHVSKL-SSAY 278 (279)
Q Consensus 265 ------------------~~~v~~~~~s-pdg~ 278 (279)
-....+|++. ++|.
T Consensus 383 g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~ 415 (433)
T 4hw6_A 383 GNSREWGYVDGELRSQALFNHPTSIAYDMKRKC 415 (433)
T ss_dssp CTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE
T ss_pred CCCCccccCCCccccccEeCCCcEEEEECCCCE
Confidence 1237889998 5653
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.34 E-value=0.00039 Score=52.23 Aligned_cols=175 Identities=10% Similarity=0.083 Sum_probs=100.6
Q ss_pred CceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
..+.+++|++++..|+ +-..++.|.++++....... +...... .|..+++++++.
T Consensus 36 ~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~-----------------~~~~~~~-------~p~~ia~d~~~~ 91 (267)
T 1npe_A 36 KVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTT-----------------IIRQDLG-------SPEGIALDHLGR 91 (267)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEE-----------------EECTTCC-------CEEEEEEETTTT
T ss_pred CcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEE-----------------EEECCCC-------CccEEEEEecCC
Confidence 3478999999766555 44457899999987532100 1000111 233345566544
Q ss_pred EE-EEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-c--CCeEEEEEccCCCCceeeeeec
Q 023672 140 VF-ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-Y--NKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 140 ~l-~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~--d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
.| ++-...+.|.++++.............. ....++++|++..|+ +. . .+.|..+++... ....+.
T Consensus 92 ~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~-----~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~--~~~~~~-- 162 (267)
T 1npe_A 92 TIFWTDSQLDRIEVAKMDGTQRRVLFDTGLV-----NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT--NRRILA-- 162 (267)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECSSCS-----SEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC--CCEEEE--
T ss_pred eEEEEECCCCEEEEEEcCCCCEEEEEECCCC-----CccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC--CcEEEE--
Confidence 44 4445577899999865432222221111 567899999766555 43 2 468888888642 111111
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
.........++++|+++.++++-...+.|.++|+........+.. .....+++.
T Consensus 163 ----~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~-~~~P~gi~~ 216 (267)
T 1npe_A 163 ----QDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEG-LQYPFAVTS 216 (267)
T ss_dssp ----CTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEEC-CCSEEEEEE
T ss_pred ----ECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecC-CCCceEEEE
Confidence 111235789999994455666666778899999876544333332 223455554
No 253
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.31 E-value=2.2e-05 Score=66.02 Aligned_cols=130 Identities=13% Similarity=0.082 Sum_probs=78.6
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccc--------cccc--------------------------------eee
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVD--------EITA--------------------------------AFS 178 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~--------~~~~--------------------------------v~~ 178 (279)
..++.++.+|.++++|.++|+.+..+....... ...+ -..
T Consensus 337 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~ 416 (582)
T 1flg_A 337 KATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNP 416 (582)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSC
T ss_pred EEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCC
Confidence 378889999999999999999887766542100 0000 013
Q ss_pred EEECCCCCEEEEe----------------------------------cCCeEEEEEccCCCCceeeeeecccccCCCCCc
Q 023672 179 VAFNPTGTKIFAG----------------------------------YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGI 224 (279)
Q Consensus 179 ~~~~~~~~~l~~~----------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 224 (279)
++++|+..++++. .++.|..||+.++....+ ..... +
T Consensus 417 ~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~----~~~~~-----~ 487 (582)
T 1flg_A 417 MAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWE----HKEHL-----P 487 (582)
T ss_dssp CEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEE----EEESS-----C
T ss_pred ceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEE----ecCCC-----C
Confidence 5677765555431 257788999988532222 11111 1
Q ss_pred eEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCE-EEEEEccCCC
Q 023672 225 MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGV-THVSKLSSAY 278 (279)
Q Consensus 225 v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v-~~~~~spdg~ 278 (279)
+..-.... .+.+++.|+.||.++.||.++|+.+.+++...+.. .-+.+..||+
T Consensus 488 ~~~g~~~t-agglvf~g~~dg~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~ 541 (582)
T 1flg_A 488 LWAGVLAT-AGNLVFTGTGDGYFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGE 541 (582)
T ss_dssp CCSCCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECSSCCCSCCEEEEETTE
T ss_pred CcccceEe-CCCEEEEECCCCcEEEEECCCCCEEEEecCCCCcccCceEEEECCE
Confidence 11111222 35577789999999999999999998887543311 1144556664
No 254
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.31 E-value=0.00074 Score=53.80 Aligned_cols=176 Identities=8% Similarity=-0.023 Sum_probs=100.7
Q ss_pred CceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC-
Q 023672 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS- 138 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~- 138 (279)
....+++|++.+..|+ +-...+.|..+++....... +..... ..|..+++++.+
T Consensus 116 ~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-----------------~~~~~~-------~~p~glavd~~~g 171 (386)
T 3v65_B 116 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-----------------VVSTGL-------ESPGGLAVDWVHD 171 (386)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEE-----------------EECSSC-------SCCCCEEEETTTT
T ss_pred CccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEE-----------------EEeCCC-------CCccEEEEEeCCC
Confidence 3477899997555554 54567888888887542110 000000 123444556544
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cC-CeEEEEEccCCCCceeeeeecc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YN-KSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d-~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.++++-...+.|.+.++........+..... ....++++|.+..|+ +- .. +.|..+++... ....+ .
T Consensus 172 ~lY~~d~~~~~I~~~~~dg~~~~~l~~~~l~-----~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~--~~~~~--~- 241 (386)
T 3v65_B 172 KLYWTDSGTSRIEVANLDGAHRKVLLWQSLE-----KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS--GRRII--A- 241 (386)
T ss_dssp EEEEEETTTTEEEECBTTSCSCEEEECSSCS-----CEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEEE--E-
T ss_pred eEEEEcCCCCeEEEEeCCCCceEEeecCCCC-----CCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC--CcEEE--E-
Confidence 4444555567888888865433322222211 567899999877776 43 44 78888888642 11111 1
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
...-.....++++|+++.++++-+..+.|..+|+........+........+|++
T Consensus 242 ---~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~giav 296 (386)
T 3v65_B 242 ---DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV 296 (386)
T ss_dssp ---CSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSSCSSEEEEEE
T ss_pred ---ECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECCCCCceEEEE
Confidence 1112357899999845666666667788999998654333333323334566666
No 255
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.30 E-value=3.7e-05 Score=62.21 Aligned_cols=137 Identities=10% Similarity=0.034 Sum_probs=85.2
Q ss_pred eCcccccCC-CCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-c-CC----eEEEEE
Q 023672 128 FPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y-NK----SVRVFD 200 (279)
Q Consensus 128 ~~~~~~~~~-~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-d~----~i~~~d 200 (279)
.|..++++| ++..|+.+...+.|+.+|+.++....... ... ....++|+++++.|+++ . ++ .+.+++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~-~~~-----~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~ 211 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS-GLS-----KVRTICWTHEADSMIITNDQNNNDRPNNYILT 211 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC-CCS-----CEEEEEECTTSSEEEEEECCSCTTSEEEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec-CCC-----CcceEEEeCCCCEEEEEeCCCCcccceEEEEe
Confidence 466677887 45566666555889999998776544433 222 57799999999966643 2 22 344444
Q ss_pred ccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee-cCCCEEEEEEccCCC
Q 023672 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG-QEGGVTHVSKLSSAY 278 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~-~~~~v~~~~~spdg~ 278 (279)
....-.....+.. ......++++|+++.++++-..++.|..++..++........ .......|+|+|+|+
T Consensus 212 ~~g~~~~~~~l~~--------~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~ 282 (430)
T 3tc9_A 212 RESGFKVITELTK--------GQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGN 282 (430)
T ss_dssp GGGTSCSEEEEEE--------CSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSS
T ss_pred CCCceeeeeeecc--------CCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCC
Confidence 3321111111111 123567889996677777766788999999987764322222 223578999999997
No 256
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.25 E-value=7.3e-05 Score=64.27 Aligned_cols=83 Identities=8% Similarity=0.134 Sum_probs=52.8
Q ss_pred CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCce
Q 023672 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIM 225 (279)
Q Consensus 147 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v 225 (279)
+|.|..||+.+++.+..+..+. ....-.+...+.+++.+ .|+.++.||.+++ +.+ ..+.. ++....
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~------~~~~g~~~tagglvf~gt~dg~l~a~D~~tG-~~l---w~~~~---~~~~~~ 520 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVT------IFNGGTLSTAGNLVFEGSADGRVIAYAADTG-EKL---WEQPA---ASGVMA 520 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESS------SCCCCEEEETTTEEEEECTTSEEEEEETTTC-CEE---EEEEC---SSCCCS
T ss_pred ceeEEEEECCCCCeEeEccCCC------CccCccceECCCEEEEECCCCcEEEEECCCC-ccc---eeeeC---CCCccc
Confidence 4779999999999988887654 33334556667777766 9999999999995 332 22221 111122
Q ss_pred EEEEEccCCCcEEEEEe
Q 023672 226 SAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 226 ~~~~~sp~~~~~l~~~~ 242 (279)
.-+.|..++.+++++.+
T Consensus 521 ~p~ty~~~G~qyv~~~~ 537 (689)
T 1yiq_A 521 APVTYSVDGEQYVTFMA 537 (689)
T ss_dssp CCEEEEETTEEEEEEEE
T ss_pred CceEEEECCEEEEEEEe
Confidence 23566773444555443
No 257
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=98.25 E-value=0.0011 Score=53.58 Aligned_cols=143 Identities=9% Similarity=0.080 Sum_probs=82.7
Q ss_pred eCcccccCC-CCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCC
Q 023672 128 FPHMSASDP-TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRP 204 (279)
Q Consensus 128 ~~~~~~~~~-~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~ 204 (279)
.|..++++| ++.++++-..++.|..++..++........... .....++|+|++++|+ +. ..+.|..++....
T Consensus 227 ~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~----~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d~~ 302 (430)
T 3tc9_A 227 NCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDS----GWEFHIQFHPSGNYAYIVVVNQHYILRSDYDWK 302 (430)
T ss_dssp SCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSS----SCCEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCC----CcceeEEEcCCCCEEEEEECCCCEEEEEeCCcc
Confidence 455667788 666666666778999999987664332222211 1467899999999666 44 7889999887642
Q ss_pred CCceeeeeecccc--cCC---------CCCceE-EEEEcc-------CCCcEEEEEeCCCcEEEEecCCCeEEEEEeec-
Q 023672 205 GRDFEKYSTLKGN--KEG---------QAGIMS-AIAFSP-------THTGMLAIGSYSQTSAIYREDNMELLYVLHGQ- 264 (279)
Q Consensus 205 ~~~~~~~~~~~~~--~~~---------~~~~v~-~~~~sp-------~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~- 264 (279)
...+.....+... ..+ .-.... .++..+ .++.++++-...+.|+.++ .++... .+.+.
T Consensus 303 ~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~I~~i~-~~G~v~-~~~g~g 380 (430)
T 3tc9_A 303 TKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHCIRILT-PQGRVT-TFAGRG 380 (430)
T ss_dssp TTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTEEEEEC-TTSEEE-EEEECC
T ss_pred cccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcEEEEEC-CCCcEE-EEEeCC
Confidence 1111111111110 000 011233 455532 1466777666778899988 456543 33322
Q ss_pred --------C---------CCEEEEEEccC
Q 023672 265 --------E---------GGVTHVSKLSS 276 (279)
Q Consensus 265 --------~---------~~v~~~~~spd 276 (279)
. ....++++.|+
T Consensus 381 ~~~~~G~~dG~~~~~~~~~~P~giavd~~ 409 (430)
T 3tc9_A 381 SNGTSGYNDGDLRQEARFNHPEGIVYDEE 409 (430)
T ss_dssp TTSSSSCBCEETTTTCBCSSEEEEEEETT
T ss_pred CCCCCcccCCCchhhcEeCCCcEEEEECC
Confidence 1 15789999984
No 258
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.23 E-value=0.001 Score=52.19 Aligned_cols=176 Identities=9% Similarity=0.004 Sum_probs=101.4
Q ss_pred CceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC-C
Q 023672 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT-S 138 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~ 138 (279)
....+++|++....|+ +-...+.|..+++....... +...... .|..+++++. +
T Consensus 73 ~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~-----------------~~~~~~~-------~p~glavd~~~g 128 (349)
T 3v64_C 73 ENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEE-----------------VVSTGLE-------SPGGLAVDWVHD 128 (349)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEE-----------------EECSSCS-------CCCEEEEETTTT
T ss_pred CceEEEEEeccccEEEEEeccCCceEEEecCCCCceE-----------------EEeCCCC-------CccEEEEecCCC
Confidence 3478999997655555 44567888888887542110 0000001 2333445554 4
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cC-CeEEEEEccCCCCceeeeeecc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YN-KSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d-~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.++++-...+.|.+.++........+..... ....++++|.+..|+ +- .. +.|..+++... ... .+.
T Consensus 129 ~ly~~d~~~~~I~~~~~dG~~~~~l~~~~l~-----~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~--~~~---~~~ 198 (349)
T 3v64_C 129 KLYWTDSGTSRIEVANLDGAHRKVLLWQSLE-----KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS--GRR---IIA 198 (349)
T ss_dssp EEEEEETTTTEEEEEETTSCSCEEEECTTCS-----CEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCE---ESC
T ss_pred eEEEEcCCCCeEEEEcCCCCceEEEEeCCCC-----CcceEEEecCcCeEEEeccCCCCEEEEEeCCCC--CcE---EEE
Confidence 4445555677899999875433322222211 567899999776666 43 44 78888888642 111 111
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
...-.....++++|+++.++++-...+.|..+|+........+........+|++
T Consensus 199 ---~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~~~~~~~~~~~P~giav 253 (349)
T 3v64_C 199 ---DTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQGLPHPFAITV 253 (349)
T ss_dssp ---CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEE
T ss_pred ---ECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCceEEEEeCCCCCceEEEE
Confidence 1123357899999856666666666778999998654333333323344566666
No 259
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.22 E-value=0.00091 Score=51.37 Aligned_cols=185 Identities=14% Similarity=0.072 Sum_probs=100.0
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (279)
....+++|+++++++++-..++.|..||...... ........ |..+++++++++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~-------------------~~~~~~~~-------p~gia~~~dG~l 85 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQ-------------------IHATVEGK-------VSGLAFTSNGDL 85 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEE-------------------EEEECSSE-------EEEEEECTTSCE
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceE-------------------EEEeCCCC-------ceeEEEcCCCcE
Confidence 4578899999998777766789999998764211 00111122 334456888886
Q ss_pred EEEecCCC--cEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCCCceeeeee-ccc
Q 023672 141 FASTTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYST-LKG 216 (279)
Q Consensus 141 l~s~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~-~~~ 216 (279)
+++..... .|..+|..+++.......... .....++..+++..+++. .++.|+++|...+......... +..
T Consensus 86 ~vad~~~~~~~v~~~d~~~g~~~~~~~~~~~----~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~ 161 (306)
T 2p4o_A 86 VATGWNADSIPVVSLVKSDGTVETLLTLPDA----IFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLAR 161 (306)
T ss_dssp EEEEECTTSCEEEEEECTTSCEEEEEECTTC----SCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSC
T ss_pred EEEeccCCcceEEEEcCCCCeEEEEEeCCCc----cccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCcccc
Confidence 66553322 466778777775433332111 123455555655545554 5888999987642101100000 000
Q ss_pred -ccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCC-CeE--EEEEeecCCCEEEEEEccCCC
Q 023672 217 -NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-MEL--LYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 217 -~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~-~~~--~~~~~~~~~~v~~~~~spdg~ 278 (279)
.....-.....+ +|+++.++++-...+.|..+|+.. ++. ...+.. .....++++.++|+
T Consensus 162 ~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~ 224 (306)
T 2p4o_A 162 SNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGN 224 (306)
T ss_dssp SSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCC
T ss_pred ccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCC
Confidence 001111234455 783345666666778899999864 331 122221 12345677777774
No 260
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=98.21 E-value=0.0009 Score=52.51 Aligned_cols=178 Identities=10% Similarity=-0.031 Sum_probs=100.5
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (279)
+..+|.+..++. +|+.+. ...|+..++...... ...........+.| ++....
T Consensus 34 d~~~C~~~~~~~-~ll~~~-~~~I~~i~~~g~~~~------------------~~~~~~~~~~~l~~-------d~~~~~ 86 (349)
T 3v64_C 34 DRRSCKALGPEP-VLLFAN-RIDIRQVLPHRSEYT------------------LLLNNLENAIALDF-------HHRREL 86 (349)
T ss_dssp TSSCEEESSSCC-EEEEEC-BSCEEEECTTSCCEE------------------EEECSCSCEEEEEE-------ETTTTE
T ss_pred CCCcccccccCc-eeEeec-ccceEEEeCCCCeeE------------------EeecCCCceEEEEE-------eccccE
Confidence 345566666633 444443 345777777643211 11122234556665 443444
Q ss_pred -EEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeecccc
Q 023672 141 -FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (279)
Q Consensus 141 -l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~~ 217 (279)
+.+-...+.|..+++..+.....+..... .+..+++.+.+..|+ +- ..+.|.+.++... . ...+ +
T Consensus 87 ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-----~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~-~-~~~l--~--- 154 (349)
T 3v64_C 87 VFWSDVTLDRILRANLNGSNVEEVVSTGLE-----SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGA-H-RKVL--L--- 154 (349)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEECSSCS-----CCCEEEEETTTTEEEEEETTTTEEEEEETTSC-S-CEEE--E---
T ss_pred EEEEeccCCceEEEecCCCCceEEEeCCCC-----CccEEEEecCCCeEEEEcCCCCeEEEEcCCCC-c-eEEE--E---
Confidence 44445677899999876654333322211 456899998666655 44 6789999998752 1 1111 1
Q ss_pred cCCCCCceEEEEEccCCCcEEEEEeCC-CcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 218 KEGQAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 218 ~~~~~~~v~~~~~sp~~~~~l~~~~~d-g~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
.........++++|.++.++++-... +.|..+++........+...-....+|+|+|++.
T Consensus 155 -~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~ 215 (349)
T 3v64_C 155 -WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGR 215 (349)
T ss_dssp -CTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTT
T ss_pred -eCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCC
Confidence 12234578999999556666665555 7788888764432222222234578899998653
No 261
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.18 E-value=0.0026 Score=55.74 Aligned_cols=192 Identities=8% Similarity=0.103 Sum_probs=113.4
Q ss_pred CCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceee-ecCCCceEEEEeeCcccccCCCC
Q 023672 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLV-VTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
...|.++...++|. |..|+.++-|..|+..++....-..... . .. ......|.++.. ++++
T Consensus 356 ~~~V~~i~~d~~g~-lWiGt~~~Gl~~~~~~~~~~~~~~~~~~-----~-----~~~~l~~~~v~~i~~-------d~~g 417 (795)
T 4a2l_A 356 DNVVSCIVEDKDKN-LWIGTNDGGLNLYNPITQRFTSYTLQED-----E-----SARGIGSNNIKAVYV-------DEKK 417 (795)
T ss_dssp CSSEEEEEECTTSC-EEEEESSSCEEEECTTTCCEEEECCC----------------CCSCSCEEEEEE-------ETTT
T ss_pred CCeeEEEEECCCCC-EEEEECCCCeEEEcCCCCcEEEEecCCC-----C-----cccCCCCccEEEEEE-------cCCC
Confidence 45699999998887 4457777778999987653311000000 0 00 011245666654 4566
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeeccccc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 218 (279)
..|..|+.++-|..+|..+++... +...........|.++...+++.+.+++. +.+.+||..+. .+..........
T Consensus 418 ~~lWigt~~~Gl~~~d~~~~~~~~-~~~~~~~l~~~~v~~i~~d~~g~lwigt~-~Gl~~~~~~~~--~~~~~~~~~~~~ 493 (795)
T 4a2l_A 418 SLVYIGTHAGGLSILHRNSGQVEN-FNQRNSQLVNENVYAILPDGEGNLWLGTL-SALVRFNPEQR--SFTTIEKEKDGT 493 (795)
T ss_dssp TEEEEEETTTEEEEEETTTCCEEE-ECTTTSCCSCSCEEEEEECSSSCEEEEES-SCEEEEETTTT--EEEECCBCTTCC
T ss_pred CEEEEEeCcCceeEEeCCCCcEEE-eecCCCCcCCCeeEEEEECCCCCEEEEec-CceeEEeCCCC--eEEEcccccccc
Confidence 646667776779999998876433 32111101122688999999888777655 56888998762 111111100000
Q ss_pred CCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe-------ecCCCEEEEEEccCCC
Q 023672 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH-------GQEGGVTHVSKLSSAY 278 (279)
Q Consensus 219 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~-------~~~~~v~~~~~spdg~ 278 (279)
.-....|.++...+ ++.+.+... + -|..||..+++. .+. .....|.++...++|+
T Consensus 494 ~~~~~~i~~i~~d~-~g~lWigt~-~-Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~ 555 (795)
T 4a2l_A 494 PVVSKQITTLFRDS-HKRLWIGGE-E-GLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGI 555 (795)
T ss_dssp BCCCCCEEEEEECT-TCCEEEEES-S-CEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSC
T ss_pred ccCCceEEEEEECC-CCCEEEEeC-C-ceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCC
Confidence 11235688999988 776665544 4 488899877765 332 1234688888888775
No 262
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.14 E-value=0.00032 Score=59.05 Aligned_cols=116 Identities=13% Similarity=0.136 Sum_probs=70.8
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCcc--------ccccc--------------------------eeeEEECCC
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAV--------DEITA--------------------------AFSVAFNPT 184 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~--------~~~~~--------------------------v~~~~~~~~ 184 (279)
..++.++.+|.+.++|.++|+.+......... ....+ -..++++|+
T Consensus 324 ~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 403 (599)
T 1w6s_A 324 KLLTHPDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPK 403 (599)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCC
Confidence 46777889999999999999988776532200 00000 124567776
Q ss_pred CCEEEEe----------------------------------------cCCeEEEEEccCCCCceeeeeecccccCCCCCc
Q 023672 185 GTKIFAG----------------------------------------YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGI 224 (279)
Q Consensus 185 ~~~l~~~----------------------------------------~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 224 (279)
..++++. ..+.|..||+.++....+ .... .+
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~----~~~~-----~~ 474 (599)
T 1w6s_A 404 RELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWE----KMER-----FA 474 (599)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEE----EEES-----SC
T ss_pred CCEEEEeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeE----ecCC-----CC
Confidence 5555431 235778888877422121 1110 01
Q ss_pred eEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec
Q 023672 225 MSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ 264 (279)
Q Consensus 225 v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 264 (279)
...-.... .+.+++.++.|+.++.||.++|+.+.+++..
T Consensus 475 ~~~g~~~t-agg~vf~gt~dg~l~A~D~~tG~~lW~~~l~ 513 (599)
T 1w6s_A 475 VWGGTMAT-AGDLVFYGTLDGYLKARDSDTGDLLWKFKIP 513 (599)
T ss_dssp CCSBCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred ccCcceEe-cCCEEEEECCCCeEEEEECCCCCEEEEeeCC
Confidence 11111222 4567777999999999999999999888744
No 263
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.13 E-value=8.3e-05 Score=62.44 Aligned_cols=115 Identities=13% Similarity=0.104 Sum_probs=73.3
Q ss_pred EEEEecCCCcEEEEECCCCeeeEEEeccCccc--------cccce--------------------------eeEEECCCC
Q 023672 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVD--------EITAA--------------------------FSVAFNPTG 185 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~--------~~~~v--------------------------~~~~~~~~~ 185 (279)
.++.++.+|.+.++|..+|+.+.......... ...++ ..++++|+.
T Consensus 318 ~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~ 397 (571)
T 2ad6_A 318 LLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPES 397 (571)
T ss_dssp EEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTT
T ss_pred EEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCC
Confidence 57778889999999999999887765432100 00011 246788887
Q ss_pred CEEEEe-c-------------------------------------CCeEEEEEccCCCCceeeeeecccccCCCCCceEE
Q 023672 186 TKIFAG-Y-------------------------------------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSA 227 (279)
Q Consensus 186 ~~l~~~-~-------------------------------------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~ 227 (279)
.++++. . ++.|..||+.++. .. ..... ...+.+
T Consensus 398 g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~-~~---W~~~~-----~~~~~~ 468 (571)
T 2ad6_A 398 RTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGK-AK---WTKWE-----KFAAWG 468 (571)
T ss_dssp TEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCC-EE---EEEEE-----SSCCCS
T ss_pred CEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCC-EE---EEecC-----CCCccc
Confidence 766643 2 3678889988742 22 12211 111222
Q ss_pred EEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec
Q 023672 228 IAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ 264 (279)
Q Consensus 228 ~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~ 264 (279)
..+.. .+..++.++.||.|+.+|.++++.+.++...
T Consensus 469 ~~~~t-~gg~v~~g~~dg~l~a~D~~tG~~lw~~~~~ 504 (571)
T 2ad6_A 469 GTLYT-KGGLVWYATLDGYLKALDNKDGKELWNFKMP 504 (571)
T ss_dssp BCEEE-TTTEEEEECTTSEEEEEETTTCCEEEEEECS
T ss_pred eeEEE-CCCEEEEEcCCCeEEEEECCCCCEEEEEeCC
Confidence 22233 3456777899999999999999999888743
No 264
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.13 E-value=0.00033 Score=55.45 Aligned_cols=106 Identities=10% Similarity=0.142 Sum_probs=63.0
Q ss_pred CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcE
Q 023672 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (279)
Q Consensus 71 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i 150 (279)
++..+++++.++.|..+|..+++........ ..+.. .| .. .+..++.++.++.|
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~------------------~~~~~---~p---~~--~~~~v~v~~~~g~l 155 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVA------------------GEALS---RP---VV--SDGLVLIHTSNGQL 155 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECS------------------SCCCS---CC---EE--ETTEEEEECTTSEE
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCC------------------CceEc---CC---EE--ECCEEEEEcCCCeE
Confidence 4557888888999999999987653221100 00000 00 00 23367778889999
Q ss_pred EEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCC
Q 023672 151 HLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (279)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~ 204 (279)
..+|..+++.+..................... ++ .++.+ .++.+..+|..++
T Consensus 156 ~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~-~v~~g~~~g~l~~~d~~tG 208 (376)
T 3q7m_A 156 QALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FG-AAVVGGDNGRVSAVLMEQG 208 (376)
T ss_dssp EEEETTTCCEEEEEECCC-----CCCCCCEEE-TT-EEEECCTTTEEEEEETTTC
T ss_pred EEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CC-EEEEEcCCCEEEEEECCCC
Confidence 99999999988877654321000000122222 33 45545 7899999999874
No 265
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.09 E-value=0.0023 Score=50.96 Aligned_cols=138 Identities=9% Similarity=-0.064 Sum_probs=82.5
Q ss_pred ceEEEEeeCcccccCCC-CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEE
Q 023672 121 SVYDFCWFPHMSASDPT-SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVR 197 (279)
Q Consensus 121 ~v~~~~~~~~~~~~~~~-~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~ 197 (279)
....+.| ++. +.++++-...+.|..+++..+.....+..... .+..+++.+.+..|+ +- ..+.|.
T Consensus 117 ~~~gl~~-------d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~-----~p~glavd~~~g~lY~~d~~~~~I~ 184 (386)
T 3v65_B 117 NAIALDF-------HHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLE-----SPGGLAVDWVHDKLYWTDSGTSRIE 184 (386)
T ss_dssp CEEEEEE-------ETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCS-----CCCCEEEETTTTEEEEEETTTTEEE
T ss_pred ccEEEEE-------ecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCC-----CccEEEEEeCCCeEEEEcCCCCeEE
Confidence 4555665 433 44444545677899999886654333332221 456799998766665 44 677888
Q ss_pred EEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC-CcEEEEecCCCeEEEEEeecCCCEEEEEEccC
Q 023672 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNMELLYVLHGQEGGVTHVSKLSS 276 (279)
Q Consensus 198 ~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-g~i~~wd~~~~~~~~~~~~~~~~v~~~~~spd 276 (279)
+.++... ....+ + .........++++|.++.++++-... +.|..+++........+...-....+|+|+|+
T Consensus 185 ~~~~dg~--~~~~l--~----~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~ 256 (386)
T 3v65_B 185 VANLDGA--HRKVL--L----WQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSGRRIIADTHLFWPNGLTIDYA 256 (386)
T ss_dssp ECBTTSC--SCEEE--E----CSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEECSSCSCEEEEEEEGG
T ss_pred EEeCCCC--ceEEe--e----cCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCC
Confidence 8888742 11111 1 12234578999998555555555555 67888887654333333333345789999976
Q ss_pred CC
Q 023672 277 AY 278 (279)
Q Consensus 277 g~ 278 (279)
+.
T Consensus 257 ~~ 258 (386)
T 3v65_B 257 GR 258 (386)
T ss_dssp GT
T ss_pred CC
Confidence 53
No 266
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.06 E-value=0.0022 Score=49.73 Aligned_cols=115 Identities=9% Similarity=0.103 Sum_probs=72.8
Q ss_pred EEEEecCCCcEEEEECC-------CCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCCC-Cceee
Q 023672 140 VFASTTRDHPIHLWDAT-------TGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRPG-RDFEK 210 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~-------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~~-~~~~~ 210 (279)
+++....+|.+..|++. +.+.++++.... .+..+...+....|+.+ .+..|..+|.+... .....
T Consensus 145 yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgs------q~EgcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~ 218 (355)
T 3amr_A 145 YAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNS------QTEGMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTV 218 (355)
T ss_dssp EEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSS------CEEEEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEE
T ss_pred EEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCC------CcceEEEcCCCCeEEEecccceEEEEeCCcCCCCCceE
Confidence 67778888999998883 335566776654 67789999988888877 77667667754311 11122
Q ss_pred eeecccccCCCCCceEEEEEccC-CCc-EEEEEe-CCCcEEEEecC-CCeEEEEEe
Q 023672 211 YSTLKGNKEGQAGIMSAIAFSPT-HTG-MLAIGS-YSQTSAIYRED-NMELLYVLH 262 (279)
Q Consensus 211 ~~~~~~~~~~~~~~v~~~~~sp~-~~~-~l~~~~-~dg~i~~wd~~-~~~~~~~~~ 262 (279)
+..+. ...-...+..|++-+. ++. +|++++ .++++.+||.. +.+.+..+.
T Consensus 219 v~~~~--~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~ 272 (355)
T 3amr_A 219 IDRAD--GRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFR 272 (355)
T ss_dssp EEEBS--SSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEE
T ss_pred EEEec--CCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEE
Confidence 22221 1122235778888431 333 455544 67789999996 667777774
No 267
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=98.05 E-value=0.00052 Score=54.31 Aligned_cols=164 Identities=6% Similarity=-0.015 Sum_probs=90.7
Q ss_pred CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcE
Q 023672 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPI 150 (279)
Q Consensus 71 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i 150 (279)
.+..+++++.++.|..+|..+++........... . ........+... | ..++..++.++.++.|
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~----~----~~~~~~~~~~~~---~-----~~~~~~v~v~~~~g~l 115 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKD----G----WFSKEPALLSGG---V-----TVSGGHVYIGSEKAQV 115 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----------CCSCCCCCEEEE---E-----EEETTEEEEEETTSEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCcccc----c----cccccCcccccC---c-----eEeCCEEEEEcCCCEE
Confidence 3567888888999999999887654322111000 0 000001111111 0 1134467778889999
Q ss_pred EEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEE
Q 023672 151 HLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAF 230 (279)
Q Consensus 151 ~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 230 (279)
..+|..+|+.+........ ........ ++..++.+.++.|..+|..++. .............. ........
T Consensus 116 ~a~d~~tG~~~W~~~~~~~-----~~~~p~~~-~~~v~v~~~~g~l~~~d~~tG~-~~W~~~~~~~~~~~--~~~~~~~~ 186 (376)
T 3q7m_A 116 YALNTSDGTVAWQTKVAGE-----ALSRPVVS-DGLVLIHTSNGQLQALNEADGA-VKWTVNLDMPSLSL--RGESAPTT 186 (376)
T ss_dssp EEEETTTCCEEEEEECSSC-----CCSCCEEE-TTEEEEECTTSEEEEEETTTCC-EEEEEECCC-------CCCCCCEE
T ss_pred EEEECCCCCEEEEEeCCCc-----eEcCCEEE-CCEEEEEcCCCeEEEEECCCCc-EEEEEeCCCCceee--cCCCCcEE
Confidence 9999999998877765542 11112222 3444444589999999998852 22111110000000 00011222
Q ss_pred ccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe
Q 023672 231 SPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (279)
Q Consensus 231 sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 262 (279)
. + ..++.++.++.|..+|..+++.+....
T Consensus 187 ~--~-~~v~~g~~~g~l~~~d~~tG~~~w~~~ 215 (376)
T 3q7m_A 187 A--F-GAAVVGGDNGRVSAVLMEQGQMIWQQR 215 (376)
T ss_dssp E--T-TEEEECCTTTEEEEEETTTCCEEEEEE
T ss_pred E--C-CEEEEEcCCCEEEEEECCCCcEEEEEe
Confidence 2 2 357778889999999999998876654
No 268
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=98.00 E-value=0.0064 Score=53.02 Aligned_cols=169 Identities=7% Similarity=0.002 Sum_probs=94.2
Q ss_pred CCceEEEEEccCCCeE-EEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 60 NNFLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
...+.+|+|++....| ++-...+.|+.+++......... ..+..... ..|..+++++.+
T Consensus 423 ~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~-------------~~vi~~~l-------~~P~GLAvD~~~ 482 (791)
T 3m0c_C 423 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY-------------DTVISRDI-------QAPDGLAVDWIH 482 (791)
T ss_dssp CSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------C-------------EEEECSSC-------SCCCEEEEETTT
T ss_pred CCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcce-------------eEEEecCC-------CCcceeeeeecC
Confidence 3557889999855544 45555678888888642110000 00100011 134444556555
Q ss_pred cE-EEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-c-CCeEEEEEccCCCCceeeeeec
Q 023672 139 CV-FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-Y-NKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 139 ~~-l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~-d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
.. +++-...+.|.+.++........+..... .+..|+++|.+..|+ +- . .+.|.+.++... ....+ +
T Consensus 483 ~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~-----~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~--~~~~l--v 553 (791)
T 3m0c_C 483 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSL--V 553 (791)
T ss_dssp TEEEEEETTTTEEEEEETTSSSEEEEEECTTC-----CEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--CEEEE--E
T ss_pred CcEEEEecCCCeEEEEeCCCCeEEEEEeCCCC-----CcceEEEecCCCCEEEecCCCCCeEEEEecCCC--ceEEE--E
Confidence 44 44445678899999875543333322222 567999999866666 43 2 378888888642 11111 1
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEE
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVL 261 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~ 261 (279)
...-.....|++++.++.++++-...+.|...++........+
T Consensus 554 ----~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~~v~ 596 (791)
T 3m0c_C 554 ----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTIL 596 (791)
T ss_dssp ----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEE
T ss_pred ----eCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceEEEe
Confidence 1223467899999845555555556678999998654433333
No 269
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.99 E-value=0.00096 Score=51.24 Aligned_cols=177 Identities=10% Similarity=0.091 Sum_probs=100.6
Q ss_pred CceEEEEEccCCCeEEEee-CCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 61 NFLKGIKWSPDGSSFLTSS-EDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~-~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
-.-.+++|++....|..++ ..++|..||...+..... ....... . ......+..+.|. ...|+++
T Consensus 13 ~yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~-~--------g~~~~~~sGl~~~----~~D~~gr 78 (334)
T 2p9w_A 13 LTPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASS-N--------GDGEQQMSGLSLL----THDNSKR 78 (334)
T ss_dssp CCCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCC-S--------SCCSEEEEEEEES----SSSSCCE
T ss_pred cCCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccc-c--------CCCcceeeEEEEe----ccCCCCc
Confidence 3345789988555555555 799999999875432111 0000000 0 0000012334331 0046666
Q ss_pred EEEEec-------------CCCcEEEEECC---CCeeeEEEeccCccc--------cccceeeEEECCCCCEEEEe-cC-
Q 023672 140 VFASTT-------------RDHPIHLWDAT---TGLLRCTYRAYDAVD--------EITAAFSVAFNPTGTKIFAG-YN- 193 (279)
Q Consensus 140 ~l~s~~-------------~d~~i~i~d~~---~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~-~d- 193 (279)
++++.. .+..|..+|+. +++.+.......... ....+..++..++|+..+++ ..
T Consensus 79 L~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~ 158 (334)
T 2p9w_A 79 LFAVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGM 158 (334)
T ss_dssp EEEEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESS
T ss_pred EEEEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCC
Confidence 666533 25779999999 787776655321110 11247899999999988855 66
Q ss_pred CeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCC
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~ 255 (279)
+.|..++... +....+.. ...........+.++++| ++..|++....|.|..+|+.+.
T Consensus 159 ~~I~rV~pdG--~~~~~~~~-~~~~~~~~~G~nGIv~~p-dg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 159 PAIARVSADG--KTVSTFAW-ESGNGGQRPGYSGITFDP-HSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp CEEEEECTTS--CCEEEEEE-CCCCSSSCCSCSEEEEET-TTTEEEEESSSSSEEEEECSSS
T ss_pred CeEEEEeCCC--CEEeeeee-cCCCcccccCcceEEEeC-CCCEEEEEcCCCeEEEEcCCCC
Confidence 7766666653 22222211 111112233477999999 7777777666999999997743
No 270
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.99 E-value=0.00014 Score=62.65 Aligned_cols=176 Identities=10% Similarity=-0.042 Sum_probs=98.6
Q ss_pred eEEEEEccCC-CeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEE
Q 023672 63 LKGIKWSPDG-SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (279)
Q Consensus 63 v~~~~~~~~~-~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (279)
...|++.+.+ +++++-...+.|.++++....... + ...+ ...|..++++|.+..|
T Consensus 455 P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~-----------------l-~~~~------~~~P~giavDp~~g~l 510 (699)
T 1n7d_A 455 PDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKT-----------------L-FREQ------GSKPRAIVVDPVHGFM 510 (699)
T ss_dssp CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEEE-----------------E-CCCS------SCCCCCEECCSSSSCC
T ss_pred cceEEEEeeCCcEEEEeccCCeEEEEecCCCceEE-----------------E-EeCC------CCCcceEEEccCCCcE
Confidence 4567887544 444454556788888876432100 0 0000 0135556677766555
Q ss_pred EEecC--CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeecccc
Q 023672 142 ASTTR--DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGN 217 (279)
Q Consensus 142 ~s~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~~ 217 (279)
+.+.. .+.|..+++.... ...+.... ......|+|+|++..|+ +- ..+.|.++|+... ....+...
T Consensus 511 y~td~~~~~~I~~~~~dG~~-~~~l~~~~----l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~--~~~~~~~~--- 580 (699)
T 1n7d_A 511 YWTDWGTPAKIKKGGLNGVD-IYSLVTEN----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILED--- 580 (699)
T ss_dssp EECCCSSSCCEEBCCSSSCC-CCEESCSS----CSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS--CCEEECCC---
T ss_pred EEcccCCCCeEEEEeCCCCC-eeEEEeCC----CCCccEEEEeccCCEEEEEecCCCeEEEEccCCC--ceEEEEec---
Confidence 55443 2678777765332 22222111 11567899999876666 43 6788999998742 11211111
Q ss_pred cCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEcc
Q 023672 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLS 275 (279)
Q Consensus 218 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~sp 275 (279)
.........|++.. + .++++....+.|..+|..+++.+..+......+++|++.+
T Consensus 581 -~~~~~~P~glavd~-~-~lywtd~~~~~V~~~d~~~G~~~~~i~~~~~~P~~i~v~~ 635 (699)
T 1n7d_A 581 -EKRLAHPFSLAVFE-D-KVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLFH 635 (699)
T ss_dssp -SSSCSSCCCCEEET-T-EEEEECSTTTCEEEEETTTEEEEECCCTTCSSCCCCCBCS
T ss_pred -CCcCCCceEeEEEC-C-EEEEEeCCCCeEEEEEccCCCceEEeecCCCCCcEEEEeC
Confidence 11112234556655 3 6677777778899999988888777754333445555443
No 271
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.98 E-value=0.0072 Score=52.97 Aligned_cols=189 Identities=10% Similarity=0.012 Sum_probs=111.0
Q ss_pred CCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
...|.++...++++.|..|+.++-|.+||..++....-... . . ......|.++.. .+++.
T Consensus 405 ~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~~~~~~------~-~------~l~~~~v~~i~~-------d~~g~ 464 (795)
T 4a2l_A 405 SNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVENFNQR------N-S------QLVNENVYAILP-------DGEGN 464 (795)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEEEECTT------T-S------CCSCSCEEEEEE-------CSSSC
T ss_pred CccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEEEeecC------C-C------CcCCCeeEEEEE-------CCCCC
Confidence 46799999988888566778777799999886543211000 0 0 012245666644 55666
Q ss_pred EEEEecCCCcEEEEECCCCeeeEEEecc-CccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeeccccc
Q 023672 140 VFASTTRDHPIHLWDATTGLLRCTYRAY-DAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 218 (279)
+.+.. .+ -|.+||..+++........ ...-....|.++...++|.+.+++. +.+..||..+. . + .........
T Consensus 465 lwigt-~~-Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~-~-~-~~~~~~~~~ 538 (795)
T 4a2l_A 465 LWLGT-LS-ALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-EGLSVFKQEGL-D-I-QKASILPVS 538 (795)
T ss_dssp EEEEE-SS-CEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-SCEEEEEEETT-E-E-EECCCSCSC
T ss_pred EEEEe-cC-ceeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-CceEEEeCCCC-e-E-EEecCCCCC
Confidence 55544 34 4888998877643322110 0000112688999999998877666 66888998763 1 1 111000010
Q ss_pred CCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec----CCCEEEEEEccCCC
Q 023672 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ----EGGVTHVSKLSSAY 278 (279)
Q Consensus 219 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~----~~~v~~~~~spdg~ 278 (279)
......|.++...+ ++.+.++.. + -|..||..+++.. .+... ...|.++...++|+
T Consensus 539 ~l~~~~i~~i~~d~-~g~lWigT~-~-Gl~~~d~~~~~~~-~~~~~~gl~~~~i~~i~~d~~g~ 598 (795)
T 4a2l_A 539 NVTKLFTNCIYEAS-NGIIWVGTR-E-GFYCFNEKDKQIK-RYNTTNGLPNNVVYGILEDSFGR 598 (795)
T ss_dssp GGGGSCEEEEEECT-TSCEEEEES-S-CEEEEETTTTEEE-EECGGGTCSCSCEEEEEECTTSC
T ss_pred CCCCCeeEEEEECC-CCCEEEEeC-C-CceeECCCCCcEE-EeCCCCCCchhheEEEEECCCCC
Confidence 12345788999988 777665443 4 4788998776543 33221 23688888877775
No 272
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.94 E-value=0.0013 Score=52.25 Aligned_cols=139 Identities=13% Similarity=0.195 Sum_probs=87.5
Q ss_pred CCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCc---------
Q 023672 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRD--------- 207 (279)
Q Consensus 137 ~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~--------- 207 (279)
++..++.+- ++.||..++......+.+....... ...+..+..+|+|.+|+...+..|.|..+-.+...
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~~Yk~L~~~~~i~-f~~i~qlvlSpsG~lLAl~g~~~V~Vv~LP~~~~~~~~~~~~~~ 108 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDSLYHSLNFSRHLV-LDDTFHVISSTSGDLLCLFNDNEIFVMEVPWGYSNVEDVSIQDA 108 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCSSCEEEECTTTCC-CCTTCEEEECTTSSEEEEECSSEEEEEECCTTCSCCCCHHHHHT
T ss_pred CCCEEEEEE-CCEEEEEECCCCCcceEEecCcccc-cCceeEEEECCCCCEEEEecCCeEEEEEecCccccCcccccccc
Confidence 444454443 5788888887554555555542000 01467899999999999878889999998742211
Q ss_pred eeee-eecccccCCCCCceEEEEEccC--CCcEEEEEeCCCcEEEEecCCC--eEEEEEe---------ecCCCEEEEEE
Q 023672 208 FEKY-STLKGNKEGQAGIMSAIAFSPT--HTGMLAIGSYSQTSAIYREDNM--ELLYVLH---------GQEGGVTHVSK 273 (279)
Q Consensus 208 ~~~~-~~~~~~~~~~~~~v~~~~~sp~--~~~~l~~~~~dg~i~~wd~~~~--~~~~~~~---------~~~~~v~~~~~ 273 (279)
.+.. ..+.........+|..+.|+|. ++..|++-..|+.|++||+... ++. .+. .....|.+++|
T Consensus 109 ~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~F 187 (452)
T 3pbp_A 109 FQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEF 187 (452)
T ss_dssp TEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEE
T ss_pred cceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEE
Confidence 1111 1111111113578999999993 2347888899999999999752 222 332 12257899999
Q ss_pred ccCCC
Q 023672 274 LSSAY 278 (279)
Q Consensus 274 spdg~ 278 (279)
.++|-
T Consensus 188 g~~~l 192 (452)
T 3pbp_A 188 SKDGL 192 (452)
T ss_dssp CTTSS
T ss_pred cCCCc
Confidence 98764
No 273
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.92 E-value=0.0052 Score=49.18 Aligned_cols=181 Identities=6% Similarity=0.004 Sum_probs=99.3
Q ss_pred CCceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCC-C
Q 023672 60 NNFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-T 137 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~ 137 (279)
-..+.+|+|++....|+ +-...+.|..+++........ ...+.......... +++++ .
T Consensus 111 ~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~-------------~~~~~~~~~~~p~g-------lavD~~~ 170 (400)
T 3p5b_L 111 LRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-------------YDTVISRDIQAPDG-------LAVDWIH 170 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CC-------------CEEEECSSCSCEEE-------EEEETTT
T ss_pred cCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCc-------------ceEEEeCCCCCccc-------EEEEecC
Confidence 45688999998665555 445578888888864210000 00011111112223 34455 4
Q ss_pred CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee--cCCeEEEEEccCCCCceeeeeec
Q 023672 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~--~d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
+++.++-...+.|.+.++........+..... .+..|+++|.+..|+ +- ..+.|...++... ....+ .
T Consensus 171 ~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~~-----~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~--~~~~~--~ 241 (400)
T 3p5b_L 171 SNIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSL--V 241 (400)
T ss_dssp TEEEEEETTTTEEEEECTTTCSEEEEEECSSC-----CEEEEEEETTTTEEEEEECSSSCCEEEEETTSC--SCEEE--E
T ss_pred CceEEEECCCCeEEEEeCCCCceEEEEeCCCC-----CcceEEEecccCeEEEEeCCCCCEEEEEeCCCC--ccEEE--E
Confidence 44555555677899999876544333332222 567999999776666 33 2478888888642 11111 1
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee--cCCCEEEEEE
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG--QEGGVTHVSK 273 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--~~~~v~~~~~ 273 (279)
...-.....|+++|+++.++++-...+.|..+|+........+.. .-....+|++
T Consensus 242 ----~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~l~~P~gl~v 298 (400)
T 3p5b_L 242 ----TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAV 298 (400)
T ss_dssp ----CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCCEEEEECSSTTSSEEEEEE
T ss_pred ----ECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCccEEEEeCCCCCCCCEEEEE
Confidence 112245789999984555555556677899999865443323322 1223455555
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.90 E-value=9.5e-05 Score=64.30 Aligned_cols=110 Identities=12% Similarity=0.079 Sum_probs=66.5
Q ss_pred ccC-CCCcEEEEecC-CC----cEEEEECCCC-eeeEEEeccCccccccceeeEEECCCCCEEE-EecC-----CeEEEE
Q 023672 133 ASD-PTSCVFASTTR-DH----PIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYN-----KSVRVF 199 (279)
Q Consensus 133 ~~~-~~~~~l~s~~~-d~----~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~d-----~~i~~~ 199 (279)
.+| |||++|+.+.. +| .|+++|+.++ +.+.. .. .. ....+.|+|||+.|+ +..+ ..|+++
T Consensus 180 ~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-~~-~~-----~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~ 252 (751)
T 2xe4_A 180 KPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-KV-SG-----TNGEIVWGPDHTSLFYVTKDETLRENKVWRH 252 (751)
T ss_dssp EECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-CE-EE-----ECSCCEECSSTTEEEEEEECTTCCEEEEEEE
T ss_pred EecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-cc-cC-----ceeeEEEecCCCEEEEEEECCCCCCCEEEEE
Confidence 348 89998875532 22 5999999998 63211 00 00 234789999998877 4443 357888
Q ss_pred EccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC---CCcEEEEecCCC
Q 023672 200 DVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY---SQTSAIYREDNM 255 (279)
Q Consensus 200 d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~---dg~i~~wd~~~~ 255 (279)
++.++...-..+.. .........+.|+| ++.+|+..+. ...|+++|+.++
T Consensus 253 ~lgt~~~~~~lv~~-----~~~~~~~~~~~~Sp-Dg~~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 253 VMGKLQSEDVCLYE-----EHNPLFSAFMYKAA-DTNTLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp ETTSCGGGCEEEEE-----CCCTTCEEEEEECT-TSSEEEEEEECSSCEEEEEEESSSC
T ss_pred ECCCCchhcEEEEe-----cCCCceEEEEEECC-CCCEEEEEecCCCCceEEEEECCCC
Confidence 88663211111111 11223456889999 7777665542 335888998775
No 275
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.87 E-value=0.0067 Score=53.05 Aligned_cols=186 Identities=10% Similarity=0.030 Sum_probs=107.6
Q ss_pred CCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
...|.++...+++.+. .|+.++-+..++..++....-... ......|.++.. .+++.
T Consensus 406 ~~~v~~i~~d~~g~lW-igt~~~Gl~~~~~~~~~~~~~~~~---------------~~~~~~v~~i~~-------d~~g~ 462 (781)
T 3v9f_A 406 SNSVLCSLKDSEGNLW-FGTYLGNISYYNTRLKKFQIIELE---------------KNELLDVRVFYE-------DKNKK 462 (781)
T ss_dssp CSBEEEEEECTTSCEE-EEETTEEEEEECSSSCEEEECCST---------------TTCCCCEEEEEE-------CTTSE
T ss_pred CcceEEEEECCCCCEE-EEeccCCEEEEcCCCCcEEEeccC---------------CCCCCeEEEEEE-------CCCCC
Confidence 4678899888887644 467666788888775533110000 012235666543 55665
Q ss_pred EEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccccC
Q 023672 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 219 (279)
+.+ |+. +-|..+|..+++................|.++...++|.+.++..++.+..||..+. .+. .+.....
T Consensus 463 lwi-gt~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~Gl~~~~~~~~--~~~---~~~~~~~ 535 (781)
T 3v9f_A 463 IWI-GTH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGGVGIYTPDMQ--LVR---KFNQYEG 535 (781)
T ss_dssp EEE-EET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSCEEEECTTCC--EEE---EECTTTT
T ss_pred EEE-EEC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCCEEEEeCCCC--eEE---EccCCCC
Confidence 444 444 458889988776544332221101123688999999998888776455777887652 122 2211111
Q ss_pred CCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec----CCCEEEEEEccCCC
Q 023672 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ----EGGVTHVSKLSSAY 278 (279)
Q Consensus 220 ~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~----~~~v~~~~~spdg~ 278 (279)
-....|.++...+ ++.+.++. .+|.|..||..+++. ..+... ...|.++...++|+
T Consensus 536 l~~~~i~~i~~d~-~g~lWi~T-~~Glv~~~d~~~~~~-~~~~~~~gl~~~~i~~i~~d~~g~ 595 (781)
T 3v9f_A 536 FCSNTINQIYRSS-KGQMWLAT-GEGLVCFPSARNFDY-QVFQRKEGLPNTHIRAISEDKNGN 595 (781)
T ss_dssp CSCSCEEEEEECT-TSCEEEEE-TTEEEEESCTTTCCC-EEECGGGTCSCCCCCEEEECSSSC
T ss_pred CCCCeeEEEEECC-CCCEEEEE-CCCceEEECCCCCcE-EEccccCCCCCceEEEEEECCCCC
Confidence 2245688999888 77665554 467558888876653 233221 23466777666664
No 276
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.83 E-value=0.0034 Score=53.72 Aligned_cols=57 Identities=14% Similarity=0.146 Sum_probs=36.9
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeC-CCeEEEEeCCCCcc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSE-DKTLRIFSLPENGI 94 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~-dg~i~iwd~~~~~~ 94 (279)
.+.+||..+........ ....+.....++++..+++.++.|+. +..+.+||..+...
T Consensus 220 ~~~~yd~~t~~w~~~~~---~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W 277 (656)
T 1k3i_A 220 LTSSWDPSTGIVSDRTV---TVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSSDSW 277 (656)
T ss_dssp EEEEECTTTCCBCCCEE---EECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGGTEE
T ss_pred EEEEEeCCCCcEEeCcc---cCCCCCCccccccCCCCCCEEEeCCCCCCceEEecCcCCce
Confidence 46678877766432211 22233444556788899999999884 56899999876543
No 277
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.82 E-value=0.0021 Score=53.96 Aligned_cols=53 Identities=19% Similarity=0.196 Sum_probs=36.9
Q ss_pred CCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCC
Q 023672 146 RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (279)
Q Consensus 146 ~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~ 204 (279)
.++.|..||+.+++.+..+.... .+....+...+..++.+ .|+.++.+|.+++
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~~------~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG 495 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEKF------AAWGGTLYTKGGLVWYATLDGYLKALDNKDG 495 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS------CCCSBCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred CCCeEEEEECCCCCEEEEecCCC------CccceeEEECCCEEEEEcCCCeEEEEECCCC
Confidence 35789999999999888876543 22222223334555545 8999999999984
No 278
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=97.82 E-value=0.00025 Score=61.02 Aligned_cols=162 Identities=8% Similarity=-0.002 Sum_probs=90.9
Q ss_pred CceEEEEEccCCCeEEEe-eCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC-C
Q 023672 61 NFLKGIKWSPDGSSFLTS-SEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT-S 138 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~ 138 (279)
..+.+|+|++.+..|+.+ ...+.|..+++.+....... . .....+ ...|..+++++. +
T Consensus 406 ~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~--~------------~~i~~~------~~~P~glavD~~~g 465 (699)
T 1n7d_A 406 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSY--D------------TVISRD------IQAPDGLAVDWIHS 465 (699)
T ss_dssp TTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCC--C------------CBCCSC------C--CCCEECCCSSS
T ss_pred cceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcce--E------------EEEeCC------CCCcceEEEEeeCC
Confidence 346688999866666544 45678888888741100000 0 000000 013444566644 4
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe--c-CCeEEEEEccCCCCceeeeeecc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--Y-NKSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~-d~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.++++-...+.|.++++........+..... ....++++|.+..|+.+ . .+.|.++++... ....+ +
T Consensus 466 ~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~-----~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~--~~~~l--~- 535 (699)
T 1n7d_A 466 NIYWTDSVLGTVSVADTKGVKRKTLFREQGS-----KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV--DIYSL--V- 535 (699)
T ss_dssp BCEECCTTTSCEEEEBSSSCCEEEECCCSSC-----CCCCEECCSSSSCCEECCCSSSCCEEBCCSSSC--CCCEE--S-
T ss_pred cEEEEeccCCeEEEEecCCCceEEEEeCCCC-----CcceEEEccCCCcEEEcccCCCCeEEEEeCCCC--CeeEE--E-
Confidence 4445545677899999875543332222111 45789999976665533 2 377888877642 11111 1
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCC
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNM 255 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~ 255 (279)
...-.....|+|+|+++.++++-+..+.|..+|+...
T Consensus 536 ---~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~ 572 (699)
T 1n7d_A 536 ---TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 572 (699)
T ss_dssp ---CSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS
T ss_pred ---eCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC
Confidence 1112346689999955666666667788999998643
No 279
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.82 E-value=0.0062 Score=47.04 Aligned_cols=178 Identities=7% Similarity=0.018 Sum_probs=100.3
Q ss_pred ceEEEEEccCCCeE-EEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCC-CCc
Q 023672 62 FLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP-TSC 139 (279)
Q Consensus 62 ~v~~~~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~ 139 (279)
.+.+++|++....| .+-...+.|..+++....... .+....- ..|..+++++ .+.
T Consensus 36 ~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~----------------~~~~~~l-------~~p~glavd~~~g~ 92 (318)
T 3sov_A 36 DAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ----------------NVVVSGL-------LSPDGLACDWLGEK 92 (318)
T ss_dssp EEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCC----------------EEEEECC-------SCCCEEEEETTTTE
T ss_pred ccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceE----------------EEEcCCC-------CCccEEEEEcCCCe
Confidence 46789999855444 455567889889887542100 0001000 1233445565 344
Q ss_pred EEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee--cCCeEEEEEccCCCCceeeeeeccc
Q 023672 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVRVFDVHRPGRDFEKYSTLKG 216 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~--~d~~i~~~d~~~~~~~~~~~~~~~~ 216 (279)
++++-...+.|.++++........+..... ....++++|.+..|+ +- ..+.|..+++... ....+ .
T Consensus 93 ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~-----~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~--~~~~~--~-- 161 (318)
T 3sov_A 93 LYWTDSETNRIEVSNLDGSLRKVLFWQELD-----QPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS--SRFII--I-- 161 (318)
T ss_dssp EEEEETTTTEEEEEETTSCSCEEEECSSCS-----SEEEEEEEGGGTEEEEEECSSSCEEEEEETTSC--SCEEE--E--
T ss_pred EEEEECCCCEEEEEECCCCcEEEEEeCCCC-----CccEEEEeCCCCEEEEEecCCCCEEEEEEcCCC--CeEEE--E--
Confidence 445555677899999875433222222211 567899999766666 43 3578888887641 11111 1
Q ss_pred ccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEcc
Q 023672 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLS 275 (279)
Q Consensus 217 ~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~sp 275 (279)
...-.....++++|+++.++++-+..+.|..+|+........+........++++..
T Consensus 162 --~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~~~~P~glav~~ 218 (318)
T 3sov_A 162 --NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNRQAVVKGSLPHPFALTLFE 218 (318)
T ss_dssp --CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSCCSCEEEEEEET
T ss_pred --ECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCceEEEecCCCCCceEEEEeC
Confidence 111235689999995566666666778899999864333222222233455666543
No 280
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.81 E-value=0.0012 Score=50.73 Aligned_cols=146 Identities=10% Similarity=0.016 Sum_probs=87.4
Q ss_pred eCcccccCCC-CcEEEEecCCCcEEEEECCCCeeeEEEeccCc---cccccceeeEEE---CCCCCEEEEec--------
Q 023672 128 FPHMSASDPT-SCVFASTTRDHPIHLWDATTGLLRCTYRAYDA---VDEITAAFSVAF---NPTGTKIFAGY-------- 192 (279)
Q Consensus 128 ~~~~~~~~~~-~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~---~~~~~~v~~~~~---~~~~~~l~~~~-------- 192 (279)
.|.+..+++. +.++++.-..++|..||...+..... ....- ......+..+.| .|+++++++..
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 3445555554 44455555789999999976644333 22210 111124579999 68887777542
Q ss_pred ------CCeEEEEEcc---CCCCceeeeeecccccC------C-CCCceEEEEEccCCCcEEEEEeCC-CcEEEEecCCC
Q 023672 193 ------NKSVRVFDVH---RPGRDFEKYSTLKGNKE------G-QAGIMSAIAFSPTHTGMLAIGSYS-QTSAIYREDNM 255 (279)
Q Consensus 193 ------d~~i~~~d~~---~~~~~~~~~~~~~~~~~------~-~~~~v~~~~~sp~~~~~l~~~~~d-g~i~~wd~~~~ 255 (279)
+..|..||+. ++. ..... .+..... + -...+..++..+ +|+..++++.. +.|...+....
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~-~~~~~-dL~~~~~~~~~~~g~~~~~~nDvavD~-~GnaYVt~s~~~~~I~rV~pdG~ 169 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSK-PVWSV-NFEKVQDEFEKKAGKRPFGVVQSAQDR-DGNSYVAFALGMPAIARVSADGK 169 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCC-CSEEE-ESHHHHHHHHHHHSSCCEEEEEEEECT-TSCEEEEEEESSCEEEEECTTSC
T ss_pred ccccCCCCEEEEEcCCcCCCCC-EEEEe-cCccccccccccccccccCCceeEECC-CCCEEEeCCCCCCeEEEEeCCCC
Confidence 5789999998 532 22111 1110000 1 123478999999 89999999888 88777776533
Q ss_pred eEEEEEeec------CCCEEEEEEccCCC
Q 023672 256 ELLYVLHGQ------EGGVTHVSKLSSAY 278 (279)
Q Consensus 256 ~~~~~~~~~------~~~v~~~~~spdg~ 278 (279)
.+..+-.. ....++|+++|||+
T Consensus 170 -~~~~~~~~~~~~~~~~G~nGIv~~pdg~ 197 (334)
T 2p9w_A 170 -TVSTFAWESGNGGQRPGYSGITFDPHSN 197 (334)
T ss_dssp -CEEEEEECCCCSSSCCSCSEEEEETTTT
T ss_pred -EEeeeeecCCCcccccCcceEEEeCCCC
Confidence 33322211 12467999999986
No 281
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.79 E-value=0.00094 Score=54.04 Aligned_cols=137 Identities=11% Similarity=-0.017 Sum_probs=81.5
Q ss_pred eCcccccCCC--CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecC----C-eEEEEE
Q 023672 128 FPHMSASDPT--SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYN----K-SVRVFD 200 (279)
Q Consensus 128 ~~~~~~~~~~--~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d----~-~i~~~d 200 (279)
.|..++++|+ ...|+.+...+.|+.+|+.++....... ... .+..++|+++++++++... . .+..++
T Consensus 140 ~P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~-~~~-----~P~giavd~dG~lyVad~~~~~~~~gv~~~~ 213 (433)
T 4hw6_A 140 NIWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTT-NIG-----QCADVNFTLNGDMVVVDDQSSDTNTGIYLFT 213 (433)
T ss_dssp CCCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECC-CCS-----CEEEEEECTTCCEEEEECCSCTTSEEEEEEC
T ss_pred CCceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeec-CCC-----CccEEEECCCCCEEEEcCCCCcccceEEEEE
Confidence 4666777884 3445555444889999998877654433 221 5789999999994444432 1 233333
Q ss_pred ccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec--CCCEEEEEEccCCC
Q 023672 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ--EGGVTHVSKLSSAY 278 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~--~~~v~~~~~spdg~ 278 (279)
.... .... ..+ ........++++|+++.++++-..++.|+.+|..++.....+... ......++|+|+|+
T Consensus 214 ~~~~-~~~~--~~~-----~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~~~~~ia~dpdG~ 285 (433)
T 4hw6_A 214 RASG-FTER--LSL-----CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKGSNFHIVWHPTGD 285 (433)
T ss_dssp GGGT-TCCE--EEE-----EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCSSCEEEEECTTSS
T ss_pred CCCC-eecc--ccc-----cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCCCcccEEEeCCCC
Confidence 3221 1100 111 012335678899856666666667788999999877763333221 22345799999986
No 282
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=97.79 E-value=0.0089 Score=50.42 Aligned_cols=173 Identities=12% Similarity=0.076 Sum_probs=96.1
Q ss_pred EEEccCCCe----EEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEE
Q 023672 66 IKWSPDGSS----FLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVF 141 (279)
Q Consensus 66 ~~~~~~~~~----l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l 141 (279)
++++|.+.. |++++.|+.|.-+|..+++.......... ..+..+. -.| .+ .++ .+
T Consensus 111 ~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG~~~W~~~~~~~-------------~~~~~~~---ssP---~v-~~g-~V 169 (599)
T 1w6s_A 111 LAYWPGDGKTPALILKTQLDGNVAALNAETGETVWKVENSDI-------------KVGSTLT---IAP---YV-VKD-KV 169 (599)
T ss_dssp CEEECCCSSSCCEEEEECTTSEEEEEETTTCCEEEEEECCCG-------------GGTCBCC---SCC---EE-ETT-EE
T ss_pred eEEEecCCcceeEEEEEcCCCEEEEEECCCCCEEEeecCCCC-------------Cccceee---cCC---EE-ECC-EE
Confidence 445443334 88888899999999998876433211100 0000000 000 00 033 34
Q ss_pred EEec------CCCcEEEEECCCCeeeEEEeccCcccc--------------------------------ccce-eeEEEC
Q 023672 142 ASTT------RDHPIHLWDATTGLLRCTYRAYDAVDE--------------------------------ITAA-FSVAFN 182 (279)
Q Consensus 142 ~s~~------~d~~i~i~d~~~~~~~~~~~~~~~~~~--------------------------------~~~v-~~~~~~ 182 (279)
+.++ .++.|+.+|.++|+.+..+........ ...+ ..+++.
T Consensus 170 ~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d 249 (599)
T 1w6s_A 170 IIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYD 249 (599)
T ss_dssp EECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEE
T ss_pred EEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEe
Confidence 4443 478999999999999888765432100 0000 135666
Q ss_pred CCCCEEEEe-cC----------------CeEEEEEccCCCCceeeeeecccc---cCCCCCceEEEEEc-cCCC---cEE
Q 023672 183 PTGTKIFAG-YN----------------KSVRVFDVHRPGRDFEKYSTLKGN---KEGQAGIMSAIAFS-PTHT---GML 238 (279)
Q Consensus 183 ~~~~~l~~~-~d----------------~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~v~~~~~s-p~~~---~~l 238 (279)
+....++.+ .+ +.|..+|.+++ +..-..+..... +.....++. +... . ++ ..+
T Consensus 250 ~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG-~~~W~~q~~~~d~wd~d~~~~p~l-~d~~~~-~G~~~~~v 326 (599)
T 1w6s_A 250 PGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTG-EAKFGYQKTPHDEWDYAGVNVMML-SEQKDK-DGKARKLL 326 (599)
T ss_dssp TTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTC-CEEEEEESSTTCSSCCCCCCCCEE-EEEECT-TSCEEEEE
T ss_pred CCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCC-ceeeEeecCCCccccccCCCccEE-Eecccc-CCcEEEEE
Confidence 776666644 33 48999999985 322222221000 001112222 2332 4 56 578
Q ss_pred EEEeCCCcEEEEecCCCeEEEEEe
Q 023672 239 AIGSYSQTSAIYREDNMELLYVLH 262 (279)
Q Consensus 239 ~~~~~dg~i~~wd~~~~~~~~~~~ 262 (279)
+.++.+|.++++|.++|+++....
T Consensus 327 ~~~~~~G~l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 327 THPDRNGIVYTLDRTDGALVSANK 350 (599)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEECCCcEEEEEECCCCCEeeccc
Confidence 888999999999999999887665
No 283
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.78 E-value=0.0045 Score=53.11 Aligned_cols=168 Identities=13% Similarity=0.087 Sum_probs=95.1
Q ss_pred CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEec------
Q 023672 72 GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTT------ 145 (279)
Q Consensus 72 ~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~------ 145 (279)
+..+++++.|+.|..+|..+++......... ......+...| .+ .++ .++.+.
T Consensus 117 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~----------------~~~~~~~~~~P---~v-~~~-~v~vg~~~~~~~ 175 (668)
T 1kv9_A 117 GDKVYVGTLDGRLIALDAKTGKAIWSQQTTD----------------PAKPYSITGAP---RV-VKG-KVIIGNGGAEYG 175 (668)
T ss_dssp BTEEEEECTTSEEEEEETTTCCEEEEEECSC----------------TTSSCBCCSCC---EE-ETT-EEEECCBCTTTC
T ss_pred CCEEEEEcCCCEEEEEECCCCCEeeeeccCC----------------CCCcceecCCC---EE-ECC-EEEEeCCCCCcC
Confidence 4578888889999999999887643321110 00000000000 00 033 344443
Q ss_pred CCCcEEEEECCCCeeeEEEeccCc-cc-------------------------cccceeeEEECCCCCEEEEe-cCC----
Q 023672 146 RDHPIHLWDATTGLLRCTYRAYDA-VD-------------------------EITAAFSVAFNPTGTKIFAG-YNK---- 194 (279)
Q Consensus 146 ~d~~i~i~d~~~~~~~~~~~~~~~-~~-------------------------~~~~v~~~~~~~~~~~l~~~-~d~---- 194 (279)
.++.|..+|..+|+.+..+..... .. .......++++|+...++.+ .++
T Consensus 176 ~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~ 255 (668)
T 1kv9_A 176 VRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWN 255 (668)
T ss_dssp CBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccc
Confidence 258999999999999888764211 00 00011247888887777755 444
Q ss_pred ---------------eEEEEEccCCCCceeeeeecccccC--CCCCceEEEEEccCCCc---EEEEEeCCCcEEEEecCC
Q 023672 195 ---------------SVRVFDVHRPGRDFEKYSTLKGNKE--GQAGIMSAIAFSPTHTG---MLAIGSYSQTSAIYREDN 254 (279)
Q Consensus 195 ---------------~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~~~~---~l~~~~~dg~i~~wd~~~ 254 (279)
.|..+|.+++. ............- ....++....+.. ++. .++.++.+|.++++|..+
T Consensus 256 ~~~~~~~~gd~l~~~~v~AlD~~tG~-~~W~~~~~~~~~wd~~~~~~~~~~d~~~-~G~~~~~v~~~~~~G~l~~lD~~t 333 (668)
T 1kv9_A 256 REVRSPGGGDNLYLSSILAIRPDTGK-LAWHYQVTPGDSWDFTATQQITLAELNI-DGKPRKVLMQAPKNGFFYVLDRTN 333 (668)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCC-EEEEEESSTTCCSCCCCCSCEEEEEEEE-TTEEEEEEEECCTTSEEEEEETTT
T ss_pred cCCCCCCCCCceeeeeEEEEcCCCCc-eeeEeecCCCccccccCCCCcEEEEecc-CCcEEEEEEEECCCCEEEEEECCC
Confidence 49999999853 2222211100000 0012333333444 454 688999999999999999
Q ss_pred CeEEEEEe
Q 023672 255 MELLYVLH 262 (279)
Q Consensus 255 ~~~~~~~~ 262 (279)
|+++...+
T Consensus 334 G~~l~~~~ 341 (668)
T 1kv9_A 334 GKLISAEK 341 (668)
T ss_dssp CCEEEEEE
T ss_pred CCEecccc
Confidence 99886554
No 284
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.75 E-value=0.0082 Score=46.31 Aligned_cols=181 Identities=7% Similarity=0.008 Sum_probs=99.0
Q ss_pred CceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC-C
Q 023672 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT-S 138 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~-~ 138 (279)
....+++|++.+..|+ +-..++.|..+++.+...... ...+..... -.|..+++++. +
T Consensus 30 ~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~-------------~~~~~~~~~-------~~p~glavd~~~~ 89 (316)
T 1ijq_A 30 RNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSS-------------YDTVISRDI-------QAPDGLAVDWIHS 89 (316)
T ss_dssp SSEEEEEEETTTTEEEEEETTTTEEEEEEC---------------------CEEEECSSC-------SCCCEEEEETTTT
T ss_pred CceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcc-------------cEEEEeCCC-------CCcCEEEEeecCC
Confidence 4578999998665554 555578999999874210000 000000000 12333455544 4
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cC-CeEEEEEccCCCCceeeeeecc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YN-KSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d-~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.+.++-...+.|.++++........+..... ....++++|.+..|+ +. .. +.|..+++.. .....+.
T Consensus 90 ~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~-----~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG--~~~~~~~--- 159 (316)
T 1ijq_A 90 NIYWTDSVLGTVSVADTKGVKRKTLFRENGS-----KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG--VDIYSLV--- 159 (316)
T ss_dssp EEEEEETTTTEEEEEETTSSSEEEEEECTTC-----CEEEEEEETTTTEEEEEECSSSCEEEEEETTS--CCEEEEE---
T ss_pred eEEEEECCCCEEEEEeCCCCceEEEEECCCC-----CcceEEeCCCCCEEEEEccCCCCeEEEEcCCC--CCeEEEE---
Confidence 4445546678899999875443333322211 567899999776666 44 33 7888888864 2111111
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee--cCCCEEEEEEc
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG--QEGGVTHVSKL 274 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~--~~~~v~~~~~s 274 (279)
...-.....++++|+++.++++-+..+.|..+|+........+.. .-....+|++.
T Consensus 160 ---~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~~~~~~~~~~~~~~~P~giav~ 217 (316)
T 1ijq_A 160 ---TENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRKTILEDEKRLAHPFSLAVF 217 (316)
T ss_dssp ---CSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEECTTTTSSEEEEEEE
T ss_pred ---ECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCCceEEEeecCCccCCcEEEEEE
Confidence 112245789999984556666666677899999864332222221 12345666664
No 285
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.74 E-value=0.0013 Score=53.72 Aligned_cols=142 Identities=11% Similarity=0.016 Sum_probs=84.5
Q ss_pred CcccccCC-CCcEEEEec-CCCcEEEEECCCCeeeEEEeccCccccccceeeEEE-------CCCCCEEEEe-cCC----
Q 023672 129 PHMSASDP-TSCVFASTT-RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAF-------NPTGTKIFAG-YNK---- 194 (279)
Q Consensus 129 ~~~~~~~~-~~~~l~s~~-~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~-------~~~~~~l~~~-~d~---- 194 (279)
|..++++| +...|+.+. ..+.|++.|+.++.......... .....+..++| ++++..|++. ..+
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~--~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~ 218 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINT--IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGD 218 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTT--SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGG
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCc--cccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcc
Confidence 44567787 344455444 34679999998877665544322 12225789999 9999866644 222
Q ss_pred ---eEEEEEccCCCCceee---eeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC-------CCeE----
Q 023672 195 ---SVRVFDVHRPGRDFEK---YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-------NMEL---- 257 (279)
Q Consensus 195 ---~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~-------~~~~---- 257 (279)
.|.+++....+ .+.. ...+. . -.....++.+|+++.++++-..++.|..+|+. ++..
T Consensus 219 ~~~~V~~i~r~~~G-~~~~~~~~~~v~-~----~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~ 292 (496)
T 3kya_A 219 ESPSVYIIKRNADG-TFDDRSDIQLIA-A----YKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPI 292 (496)
T ss_dssp GEEEEEEEECCTTS-CCSTTSCEEEEE-E----ESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCB
T ss_pred cCceEEEEecCCCC-ceeecccceeec-c----CCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccc
Confidence 26666633311 1110 01111 1 11345778999667777777788889999997 5543
Q ss_pred -------EEE-Eee-cCCCEEEEEEccCCC
Q 023672 258 -------LYV-LHG-QEGGVTHVSKLSSAY 278 (279)
Q Consensus 258 -------~~~-~~~-~~~~v~~~~~spdg~ 278 (279)
... +.. .......|+|+|+|+
T Consensus 293 ~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~ 322 (496)
T 3kya_A 293 VKNNPNTFKQLFTIADPSWEFQIFIHPTGK 322 (496)
T ss_dssp GGGCTTTEEEEEECSSSSCCEEEEECTTSS
T ss_pred ccccccccceeEecCCCCCceEEEEcCCCC
Confidence 222 222 234568999999996
No 286
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.67 E-value=0.014 Score=46.73 Aligned_cols=177 Identities=10% Similarity=-0.039 Sum_probs=103.9
Q ss_pred CceEEEEEccC-CCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 61 NFLKGIKWSPD-GSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~-~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
.....+++.+. ++++++-...+.|.+.+++..... .+....... |..++++|.+.
T Consensus 159 ~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~-----------------~l~~~~~~~-------P~~iavdp~~g 214 (400)
T 3p5b_L 159 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-----------------TLFRENGSK-------PRAIVVDPVHG 214 (400)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEE-----------------EEEECSSCC-------EEEEEEETTTT
T ss_pred CCcccEEEEecCCceEEEECCCCeEEEEeCCCCceE-----------------EEEeCCCCC-------cceEEEecccC
Confidence 45678888874 444445556778888887643210 011111112 33345566555
Q ss_pred EEEEecC--CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe--cCCeEEEEEccCCCCceeeeeecc
Q 023672 140 VFASTTR--DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 140 ~l~s~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.|+.+.. .+.|...++............-. ....|++++++..|+.. ..+.|..+|+... ....+...
T Consensus 215 ~ly~td~~~~~~I~~~~~dG~~~~~~~~~~l~-----~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~~~- 286 (400)
T 3p5b_L 215 FMYWTDWGTPAKIKKGGLNGVDIYSLVTENIQ-----WPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILED- 286 (400)
T ss_dssp EEEEEECSSSCCEEEEETTSCSCEEEECSSCS-----CEEEEEEETTTTEEEEEETTTTEEEEEETTSC--CCEEEEEC-
T ss_pred eEEEEeCCCCCEEEEEeCCCCccEEEEECCCC-----ceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC--ccEEEEeC-
Confidence 5555542 36788888864433222222111 66799999988777743 6788999998742 11222111
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEc
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKL 274 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~s 274 (279)
.........+++. ++.++++-...+.|..+|..+++.+..+......+.+++..
T Consensus 287 ---~~~l~~P~gl~v~--~~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~p~~i~v~ 340 (400)
T 3p5b_L 287 ---EKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMVLF 340 (400)
T ss_dssp ---SSTTSSEEEEEEE--TTEEEEEESSSCSEEEEESSSCCCCEEEECSCSCEEEEEEE
T ss_pred ---CCCCCCCEEEEEe--CCEEEEecCCCCeEEEEEcCCCCceEEEecCCCCCceEEEE
Confidence 1122335567763 55677777778889999988888777776544455666543
No 287
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.67 E-value=0.013 Score=48.05 Aligned_cols=163 Identities=10% Similarity=0.114 Sum_probs=87.9
Q ss_pred ceEEEEEcc-CCCeEEEe-eCCCeEEEEeCCCCccccccccccccCCCCcccceeeec--CCCceEEEEeeCcccccCCC
Q 023672 62 FLKGIKWSP-DGSSFLTS-SEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVT--EGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 62 ~v~~~~~~~-~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~~~~~~~~~~~ 137 (279)
.-..|+|+| +...|+.+ ...+.|++.|+.++..... .... .......++|.-.-.-.+++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l----------------~~~~~~~~~~p~~ia~~~~~~~~d~~ 203 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSP----------------LNINTIPTNRIRSIAFNKKIEGYADE 203 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEE----------------ECCTTSSCSBEEEEEECCCBTTTBCT
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEE----------------EccCccccCCCcEEEEeecccccCCC
Confidence 356899998 34445444 4446788888886543211 0000 01123333331111111778
Q ss_pred CcEEEEecCCC-------cEEEEECCC-Ceee-----EEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEcc
Q 023672 138 SCVFASTTRDH-------PIHLWDATT-GLLR-----CTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVH 202 (279)
Q Consensus 138 ~~~l~s~~~d~-------~i~i~d~~~-~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~ 202 (279)
+..|+++...+ .|.+++... +... ..+.... .+..++++|++..|+ +. .++.|..+|+.
T Consensus 204 G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~------~p~giavdp~~g~LYvtd~~~g~V~r~d~~ 277 (496)
T 3kya_A 204 AEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAAYK------QCNGATIHPINGELYFNSYEKGQVFRLDLV 277 (496)
T ss_dssp TCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEEES------CCCCEEECTTTCCEEEEETTTTEEEEECHH
T ss_pred CCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeeccCC------CceEEEEcCCCCeEEEEECCCCEEEEEecc
Confidence 88666665443 266665443 2321 2222111 456889999655554 55 78899999997
Q ss_pred -------CCCC--c--------eeeeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEec
Q 023672 203 -------RPGR--D--------FEKYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYRE 252 (279)
Q Consensus 203 -------~~~~--~--------~~~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~ 252 (279)
++.. + ...+... +.......++|+| ++. ++++-+..+.|+.++.
T Consensus 278 ~~~~~~~tg~~~tp~~~~~~g~~~~l~~~-----~~~~~p~~ia~~p-~G~~lYvaD~~~h~I~kid~ 339 (496)
T 3kya_A 278 DYFKTIKNGGSWDPIVKNNPNTFKQLFTI-----ADPSWEFQIFIHP-TGKYAYFGVINNHYFMRSDY 339 (496)
T ss_dssp HHHHHHHTTCCCCCBGGGCTTTEEEEEEC-----SSSSCCEEEEECT-TSSEEEEEETTTTEEEEEEE
T ss_pred cccccccCceeecccccccccccceeEec-----CCCCCceEEEEcC-CCCEEEEEeCCCCEEEEEec
Confidence 4221 0 1111111 2234567899999 777 4555566778888664
No 288
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.66 E-value=0.011 Score=45.51 Aligned_cols=166 Identities=11% Similarity=0.003 Sum_probs=96.9
Q ss_pred CceEEEEEccCCCeE-EEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 61 NFLKGIKWSPDGSSF-LTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l-~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
....++++++.+..| ++-...+.|.+++++..... .+...... .|..++++|.+.
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~-----------------~~~~~~~~-------~P~~iavdp~~g 132 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-----------------TLFRENGS-------KPRAIVVDPVHG 132 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-----------------EEEECTTC-------CEEEEEEETTTT
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceE-----------------EEEECCCC-------CcceEEeCCCCC
Confidence 345788888755444 45456788999888643110 01111111 233345576555
Q ss_pred EEEEecCC--CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeecc
Q 023672 140 VFASTTRD--HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 140 ~l~s~~~d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.|+.+... +.|...++.. .....+.... ......+++++++..|+ +- ..+.|..+|+... ....+...
T Consensus 133 ~ly~~d~~~~~~I~~~~~dG-~~~~~~~~~~----~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~--~~~~~~~~- 204 (316)
T 1ijq_A 133 FMYWTDWGTPAKIKKGGLNG-VDIYSLVTEN----IQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILED- 204 (316)
T ss_dssp EEEEEECSSSCEEEEEETTS-CCEEEEECSS----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEEC-
T ss_pred EEEEEccCCCCeEEEEcCCC-CCeEEEEECC----CCCceEEEEeccCCEEEEEECCCCeEEEEecCCC--ceEEEeec-
Confidence 55544432 6788888753 3333332111 12567999999877777 43 6789999999742 12222111
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG 263 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 263 (279)
.........+++. ++.++++-...+.|..+|..+++.+..+..
T Consensus 205 ---~~~~~~P~giav~--~~~ly~~d~~~~~V~~~~~~~g~~~~~i~~ 247 (316)
T 1ijq_A 205 ---EKRLAHPFSLAVF--EDKVFWTDIINEAIFSANRLTGSDVNLLAE 247 (316)
T ss_dssp ---TTTTSSEEEEEEE--TTEEEEEETTTTEEEEEETTTCCCCEEEEC
T ss_pred ---CCccCCcEEEEEE--CCEEEEEECCCCeEEEEeCCCCcceEEEec
Confidence 1112345677774 456777777788899999888876666654
No 289
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.63 E-value=0.028 Score=49.18 Aligned_cols=192 Identities=8% Similarity=-0.001 Sum_probs=109.0
Q ss_pred CCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 59 PNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 59 h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
....|.++...++|. |-.|+.++-|..|+..+.....-..... ... ........|.++.. .+++
T Consensus 311 ~~~~v~~i~~D~~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~----~~~----~~~l~~~~v~~i~~-------d~~g 374 (781)
T 3v9f_A 311 SNASARYIFQDSFNN-IWIGTWGGGINFISNAPPTFHTWSYSPT----QMN----ESSLSNKVVSSVCD-------DGQG 374 (781)
T ss_dssp SSSCEEEEEECSSCC-EEEEEBSSCEEEECSSCCSCEEEC--------CCC----SSCCSSSCEEEEEE-------CTTS
T ss_pred CCCeEEEEEEeCCCC-EEEEecCCeEEEeCCCCCcceeeccCcc----ccc----cCCCCCcceEEEEE-------cCCC
Confidence 346799999999886 5557766778888876543211000000 000 00012235666654 4555
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeeccccc
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNK 218 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~ 218 (279)
. |..|+.++-|..||..++..... .... ......|.++...+++.+.++..++.+..+|..++ .+. .+...
T Consensus 375 ~-lWigt~~~Gl~~~~~~~~~~~~~-~~~~-~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~--~~~---~~~~~- 445 (781)
T 3v9f_A 375 K-LWIGTDGGGINVFENGKRVAIYN-KENR-ELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLK--KFQ---IIELE- 445 (781)
T ss_dssp C-EEEEEBSSCEEEEETTEEEEECC-------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSC--EEE---ECCST-
T ss_pred C-EEEEeCCCcEEEEECCCCeEEEc-cCCC-CCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCC--cEE---EeccC-
Confidence 4 44566556688899876543221 1100 11112688999888888777666678888988762 111 11110
Q ss_pred CCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeec-----CCCEEEEEEccCCC
Q 023672 219 EGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQ-----EGGVTHVSKLSSAY 278 (279)
Q Consensus 219 ~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~-----~~~v~~~~~spdg~ 278 (279)
......|.++...+ ++.+.+. +. +-|..||..+++........ ...|.++...++|+
T Consensus 446 ~~~~~~v~~i~~d~-~g~lwig-t~-~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~ 507 (781)
T 3v9f_A 446 KNELLDVRVFYEDK-NKKIWIG-TH-AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGR 507 (781)
T ss_dssp TTCCCCEEEEEECT-TSEEEEE-ET-TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCC
T ss_pred CCCCCeEEEEEECC-CCCEEEE-EC-CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCC
Confidence 12245688998888 6665554 44 45888998876543322212 35688888777764
No 290
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.62 E-value=0.0093 Score=46.66 Aligned_cols=120 Identities=9% Similarity=0.026 Sum_probs=64.4
Q ss_pred CCcEEEEECCCC-eeeEEEeccCccccccceeeEEECCCCCEEEEec----C------------CeEEEEEccCCCCcee
Q 023672 147 DHPIHLWDATTG-LLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGY----N------------KSVRVFDVHRPGRDFE 209 (279)
Q Consensus 147 d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~----d------------~~i~~~d~~~~~~~~~ 209 (279)
+.+|.+|++... .....+..... ......+.+.+.++|.++++.. | ..-++|.+.. +. ..
T Consensus 138 ~s~ielf~~d~~~~~~~~~~~~~g-~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~-~~-~~ 214 (355)
T 3sre_A 138 SSTVEVFKFQEEEKSLLHLKTIRH-KLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP-ND-VR 214 (355)
T ss_dssp CCEEEEEEEETTTTEEEEEEEECC-TTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-TC-CE
T ss_pred CCeEEEEEEECCCCEEEEEecccc-CCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-Ce-EE
Confidence 457777776543 22222211111 1223678999999998776532 1 1233444333 11 11
Q ss_pred eeeecccccCCCCCceEEEEEccCCCc-EEEEEeCCCcEEEEecCC-CeE--EEEEeecCCCEEEEEEcc-CCC
Q 023672 210 KYSTLKGNKEGQAGIMSAIAFSPTHTG-MLAIGSYSQTSAIYREDN-MEL--LYVLHGQEGGVTHVSKLS-SAY 278 (279)
Q Consensus 210 ~~~~~~~~~~~~~~~v~~~~~sp~~~~-~l~~~~~dg~i~~wd~~~-~~~--~~~~~~~~~~v~~~~~sp-dg~ 278 (279)
. +. ..-...+.++|+| ++. ++++-+..+.|+.|++.. +.. ...+. ..+..-.+++.+ +|+
T Consensus 215 ~---~~----~~l~~pNGia~sp-Dg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~-~~g~PDGi~vD~e~G~ 279 (355)
T 3sre_A 215 V---VA----EGFDFANGINISP-DGKYVYIAELLAHKIHVYEKHANWTLTPLRVLS-FDTLVDNISVDPVTGD 279 (355)
T ss_dssp E---EE----EEESSEEEEEECT-TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEE-CSSEEEEEEECTTTCC
T ss_pred E---ee----cCCcccCcceECC-CCCEEEEEeCCCCeEEEEEECCCCcEecCEEEe-CCCCCceEEEeCCCCc
Confidence 1 11 1123478999999 664 555556678899999863 332 22332 234566777777 464
No 291
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.61 E-value=0.011 Score=43.96 Aligned_cols=119 Identities=10% Similarity=0.129 Sum_probs=76.7
Q ss_pred CceEEEEeeCcccccCCCC-cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEE
Q 023672 120 ESVYDFCWFPHMSASDPTS-CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVR 197 (279)
Q Consensus 120 ~~v~~~~~~~~~~~~~~~~-~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~ 197 (279)
..+..++| +|++ .++++...++.|...|+. ++.+..+..... .....|++.+++.++++. .++.+.
T Consensus 27 ~~lSGla~-------~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~----~D~EGIa~~~~g~~~vs~E~~~~l~ 94 (255)
T 3qqz_A 27 NNISSLTW-------SAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFV----KDLETIEYIGDNQFVISDERDYAIY 94 (255)
T ss_dssp SCEEEEEE-------ETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSSC----SSEEEEEECSTTEEEEEETTTTEEE
T ss_pred cCcceeEE-------eCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCC----CChHHeEEeCCCEEEEEECCCCcEE
Confidence 35677777 4444 455567778899999997 888888765432 145688999998877776 788999
Q ss_pred EEEccCCCCceeeeeecccc--cCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 198 VFDVHRPGRDFEKYSTLKGN--KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 198 ~~d~~~~~~~~~~~~~~~~~--~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
++++...+. .......... ..........++|+| .+..|+++.+.....||.+
T Consensus 95 ~~~v~~~~~-i~~~~~~~~~~~~~~~N~g~EGLA~d~-~~~~L~va~E~~p~~i~~~ 149 (255)
T 3qqz_A 95 VISLTPNSE-VKILKKIKIPLQESPTNCGFEGLAYSR-QDHTFWFFKEKNPIEVYKV 149 (255)
T ss_dssp EEEECTTCC-EEEEEEEECCCSSCCCSSCCEEEEEET-TTTEEEEEEESSSEEEEEE
T ss_pred EEEcCCCCe-eeeeeeeccccccccccCCcceEEEeC-CCCEEEEEECcCCceEEEE
Confidence 999876442 2212222111 123345678999999 6655555665544455544
No 292
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.59 E-value=0.0076 Score=50.73 Aligned_cols=52 Identities=13% Similarity=0.228 Sum_probs=36.3
Q ss_pred CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cCCeEEEEEccCC
Q 023672 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSVRVFDVHRP 204 (279)
Q Consensus 147 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~~~d~~~~ 204 (279)
++.|..||+.+++.+....... ++..-.....+.+++.+ .|+.++.||.+++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~------~~~~g~~~tagglvf~g~~dg~l~A~D~~tG 517 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL------PLWAGVLATAGNLVFTGTGDGYFKAFDAKSG 517 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS------CCCSCCEEETTTEEEEECTTSEEEEEETTTC
T ss_pred cceEEEEECCCCCEEEEecCCC------CCcccceEeCCCEEEEECCCCcEEEEECCCC
Confidence 6789999999999888776543 22221122235566655 9999999999985
No 293
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=97.56 E-value=0.0099 Score=46.50 Aligned_cols=140 Identities=11% Similarity=0.026 Sum_probs=78.7
Q ss_pred ccCCCCcEEEEe------------cCCCcEEEEECCCCe-eeEEEeccC--ccccccceeeEEECC--CCC-EE-EEe--
Q 023672 133 ASDPTSCVFAST------------TRDHPIHLWDATTGL-LRCTYRAYD--AVDEITAAFSVAFNP--TGT-KI-FAG-- 191 (279)
Q Consensus 133 ~~~~~~~~l~s~------------~~d~~i~i~d~~~~~-~~~~~~~~~--~~~~~~~v~~~~~~~--~~~-~l-~~~-- 191 (279)
++.|+|..++++ ..+|.|.++|+.+.. ....+.... ..........+.+.+ ++. +| ++.
T Consensus 56 ~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~ 135 (355)
T 3sre_A 56 EILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHP 135 (355)
T ss_dssp EECTTSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECS
T ss_pred EEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECC
Confidence 345666555554 268999999997421 122232221 000112456777755 353 34 343
Q ss_pred -cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEe-----------------CCCcEEEEecC
Q 023672 192 -YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS-----------------YSQTSAIYRED 253 (279)
Q Consensus 192 -~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~-----------------~dg~i~~wd~~ 253 (279)
.+..|.+|++...+........+.. ..-...+.+++.+ +|.++++.. ..|.|+-+|.
T Consensus 136 ~~~s~ielf~~d~~~~~~~~~~~~~g---~~~~~pND~~v~~-~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~- 210 (355)
T 3sre_A 136 GSSSTVEVFKFQEEEKSLLHLKTIRH---KLLPSVNDIVAVG-PEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSP- 210 (355)
T ss_dssp TTCCEEEEEEEETTTTEEEEEEEECC---TTCSSEEEEEEEE-TTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECT-
T ss_pred CCCCeEEEEEEECCCCEEEEEecccc---CCCCCCceEEEeC-CCCEEecCCcEeCCcccccchhhccCCccEEEEEEC-
Confidence 3678999998875444444444422 1234678999999 888887754 1244555554
Q ss_pred CCeEEEEEeecCCCEEEEEEccCCCC
Q 023672 254 NMELLYVLHGQEGGVTHVSKLSSAYT 279 (279)
Q Consensus 254 ~~~~~~~~~~~~~~v~~~~~spdg~~ 279 (279)
++...... .-...++++|||||++
T Consensus 211 -~~~~~~~~-~l~~pNGia~spDg~~ 234 (355)
T 3sre_A 211 -NDVRVVAE-GFDFANGINISPDGKY 234 (355)
T ss_dssp -TCCEEEEE-EESSEEEEEECTTSSE
T ss_pred -CeEEEeec-CCcccCcceECCCCCE
Confidence 33322223 2345799999999963
No 294
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.52 E-value=0.025 Score=48.39 Aligned_cols=114 Identities=14% Similarity=0.073 Sum_probs=66.3
Q ss_pred EEEEcc-CCCeEEEeeCCC-----------eEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCccc
Q 023672 65 GIKWSP-DGSSFLTSSEDK-----------TLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMS 132 (279)
Q Consensus 65 ~~~~~~-~~~~l~t~~~dg-----------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 132 (279)
.+++.+ +++.++.|+.+. .+.+||..++...... ............ .
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~--------------~~~~~~~~~~~~-------~ 248 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRT--------------VTVTKHDMFCPG-------I 248 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCE--------------EEECSCCCSSCE-------E
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCc--------------ccCCCCCCcccc-------c
Confidence 556677 888888877543 5788988866432110 000001111111 1
Q ss_pred ccCCCCcEEEEecC-CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe--cC-----CeEEEEEccC
Q 023672 133 ASDPTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YN-----KSVRVFDVHR 203 (279)
Q Consensus 133 ~~~~~~~~l~s~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d-----~~i~~~d~~~ 203 (279)
++..++.+++.|+. +..+.+||..+.+....-..+.. +.-.+++..+++++++.| .+ ..+.+||..+
T Consensus 249 ~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~----R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t 323 (656)
T 1k3i_A 249 SMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVA----RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSS 323 (656)
T ss_dssp EECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSC----CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTT
T ss_pred cCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCcc----ccccceEEecCCeEEEEeCcccCCcccccceEeCCCC
Confidence 33568888888874 45899999987754432222211 122356667788887754 33 5689999976
No 295
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=97.50 E-value=0.012 Score=47.83 Aligned_cols=111 Identities=13% Similarity=0.233 Sum_probs=58.6
Q ss_pred ccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCcc---ccccceeeEEECCC---CCEEEEe--c----------
Q 023672 131 MSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAV---DEITAAFSVAFNPT---GTKIFAG--Y---------- 192 (279)
Q Consensus 131 ~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~---~~~~~v~~~~~~~~---~~~l~~~--~---------- 192 (279)
.+++.|+|+++++-...+.|.+++..+++........... ........|+|+|+ +..|+.+ .
T Consensus 31 ~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~~~~ 110 (454)
T 1cru_A 31 ALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTDKEL 110 (454)
T ss_dssp EEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--CCS
T ss_pred EEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCcccc
Confidence 3456889987776554457888887655543222221110 11235678999996 5555532 2
Q ss_pred --CCeEEEEEccCCCCceeeeeeccccc-CCCCCceEEEEEccCCCcEEEEEe
Q 023672 193 --NKSVRVFDVHRPGRDFEKYSTLKGNK-EGQAGIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 193 --d~~i~~~d~~~~~~~~~~~~~~~~~~-~~~~~~v~~~~~sp~~~~~l~~~~ 242 (279)
...|.-|++......+.....+.... .........++|.| +|.++++.+
T Consensus 111 ~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~p-DG~Lyv~~G 162 (454)
T 1cru_A 111 PNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGP-DQKIYYTIG 162 (454)
T ss_dssp CEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECT-TSCEEEEEC
T ss_pred ccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECC-CCeEEEEEC
Confidence 23566666543221111111111100 11123478999999 777777654
No 296
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.43 E-value=0.0042 Score=48.75 Aligned_cols=107 Identities=16% Similarity=0.123 Sum_probs=57.6
Q ss_pred CcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCC---CCEEEEe--cC-----CeEEE
Q 023672 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT---GTKIFAG--YN-----KSVRV 198 (279)
Q Consensus 129 ~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~--~d-----~~i~~ 198 (279)
|..+++.|+|+++++ ..++.|.+++ +++...................|+|+|+ +..|+++ .. +.|..
T Consensus 33 P~~ia~~pdG~l~V~-e~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~v~r 109 (352)
T 2ism_A 33 PWALAFLPDGGMLIA-ERPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQVVR 109 (352)
T ss_dssp EEEEEECTTSCEEEE-ETTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEEEEE
T ss_pred ceEEEEcCCCeEEEE-eCCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccEEEE
Confidence 344566889985554 5569999998 4443221111110111226789999998 5555533 22 67888
Q ss_pred EEccCCCCc--eeee-eeccc-ccCCCCCceEEEEEccCCCcEEEEEe
Q 023672 199 FDVHRPGRD--FEKY-STLKG-NKEGQAGIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 199 ~d~~~~~~~--~~~~-~~~~~-~~~~~~~~v~~~~~sp~~~~~l~~~~ 242 (279)
|+... +.. .+.+ ..+.. ....| ....++|.| ++.++++.+
T Consensus 110 ~~~~~-~~~~~~~~l~~~~p~~~~~~h--~~~~l~~~p-dG~Lyv~~G 153 (352)
T 2ism_A 110 LRHLG-ERGVLDRVVLDGIPARPHGLH--SGGRIAFGP-DGMLYVTTG 153 (352)
T ss_dssp EEECS-SCEEEEEEEEEEECCCTTCCC--CCCCEEECT-TSCEEEECC
T ss_pred EEeCC-CCcCceEEEEEeCCCCCCCCc--CCceEEECC-CCCEEEEEC
Confidence 88764 211 1111 11211 01123 246899999 787766643
No 297
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=97.39 E-value=0.0073 Score=47.43 Aligned_cols=105 Identities=12% Similarity=0.074 Sum_probs=56.1
Q ss_pred cccccCCCCcEEEEecCCCcEEEEECCCCe-eeEEEeccCccccccceeeEEECCC---CCEEEEe-c----C----CeE
Q 023672 130 HMSASDPTSCVFASTTRDHPIHLWDATTGL-LRCTYRAYDAVDEITAAFSVAFNPT---GTKIFAG-Y----N----KSV 196 (279)
Q Consensus 130 ~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~v~~~~~~~~---~~~l~~~-~----d----~~i 196 (279)
..+++.|++++++ +..++.|.+++ .+++ .+..+.. ..........|+|+|+ +..|+++ . + ..|
T Consensus 32 ~~ia~~pdG~l~V-~e~~g~I~~~d-~~G~~~~~~~~v--~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v 107 (354)
T 3a9g_A 32 WSIAPLGGGRYLV-TERPGRLVLIS-PSGKKLVASFDV--ANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRV 107 (354)
T ss_dssp EEEEEEETTEEEE-EETTTEEEEEC-SSCEEEEEECCC--CCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEE
T ss_pred eEEEEcCCCeEEE-EeCCCEEEEEe-CCCceEeeccce--eecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEE
Confidence 3445577887555 45569999887 4454 1221110 0011125779999998 4455433 2 2 567
Q ss_pred EEEEccCCCCcee---ee-eecccccCCCCCceEEEEEccCCCcEEEEEe
Q 023672 197 RVFDVHRPGRDFE---KY-STLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 197 ~~~d~~~~~~~~~---~~-~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~ 242 (279)
..|+......... .+ ..+. ....| ....++|.| ++.++++.+
T Consensus 108 ~r~~~~~~~~~~~~~~~l~~~~~-~~~~h--~~~~l~~~p-DG~Lyvt~G 153 (354)
T 3a9g_A 108 IRGRLDGSTFKLKEVKTLIDGIP-GAYIH--NGGRIRFGP-DGMLYITTG 153 (354)
T ss_dssp EEEEECSSSCCEEEEEEEEEEEE-CCSSC--CCCCEEECT-TSCEEEECC
T ss_pred EEEEECCCCcCcCccEEEEEcCC-CCCCc--CCceEEECC-CCcEEEEEC
Confidence 7777764211111 11 1121 11223 346799999 787777644
No 298
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.39 E-value=0.029 Score=43.44 Aligned_cols=161 Identities=11% Similarity=0.090 Sum_probs=85.0
Q ss_pred CCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC
Q 023672 58 IPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 58 ~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (279)
++...+..+++.+++.+++++...+..+-.|-. +.. +.. +.......+..+.+ .++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~g-G~t---------------W~~-~~~~~~~~~~~~~~-------~~~ 215 (327)
T 2xbg_A 160 EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEPG-QTA---------------WEP-HNRTTSRRLHNMGF-------TPD 215 (327)
T ss_dssp SCCCCEEEEEECTTSCEEEEETTSSEEEEECTT-CSS---------------CEE-EECCSSSCEEEEEE-------CTT
T ss_pred CCCcceEEEEEcCCCcEEEEECCCcEEEEeCCC-CCc---------------eeE-CCCCCCCccceeEE-------CCC
Confidence 445678899999988877766544333333321 110 000 11112234555544 566
Q ss_pred CcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccc
Q 023672 138 SCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGN 217 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 217 (279)
+..++ ++.+|.+.+.+...++.-..+.... ......+.++.+.+++.+++++.++.+ ++.... +.........
T Consensus 216 g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~~-~~~~~~~~~v~~~~~~~~~~~g~~g~i-~~S~Dg-G~tW~~~~~~--- 288 (327)
T 2xbg_A 216 GRLWM-IVNGGKIAFSDPDNSENWGELLSPL-RRNSVGFLDLAYRTPNEVWLAGGAGAL-LCSQDG-GQTWQQDVDV--- 288 (327)
T ss_dssp SCEEE-EETTTEEEEEETTEEEEECCCBCTT-SSCCSCEEEEEESSSSCEEEEESTTCE-EEESST-TSSCEECGGG---
T ss_pred CCEEE-EeCCceEEEecCCCCCeeEeccCCc-ccCCcceEEEEecCCCEEEEEeCCCeE-EEeCCC-CcccEEcCcc---
Confidence 66554 4457777766433243222222110 001114778999988888888877776 333333 4444332211
Q ss_pred cCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 218 KEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 218 ~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
......+.++.|.+ ++. +++++.+|.|.-++-
T Consensus 289 -~~~~~~~~~v~~~~-~~~-~~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 289 -KKVPSNFYKILFFS-PDQ-GFILGQKGILLRYVT 320 (327)
T ss_dssp -TTSSSCCCEEEEEE-TTE-EEEECSTTEEEEECC
T ss_pred -CCCCCCeEEEEEEC-CCc-eEEEcCCceEEEEcC
Confidence 12234578888876 555 455566887766653
No 299
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.37 E-value=0.063 Score=46.92 Aligned_cols=175 Identities=10% Similarity=-0.043 Sum_probs=100.1
Q ss_pred CceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
.....|++.+.+..|+ +-...+.|.+.++...... .+....... |..++++|.+.
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~-----------------~l~~~~l~~-------P~gIaVDp~~g 526 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-----------------TLFRENGSK-------PRAIVVDPVHG 526 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEE-----------------EEEECTTCC-------EEEEEEETTTT
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEE-----------------EEEeCCCCC-------cceEEEecCCC
Confidence 4566788888665444 5555788888888743210 011111112 33445576655
Q ss_pred EEEEecC--CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe--cCCeEEEEEccCCCCceeeeeecc
Q 023672 140 VFASTTR--DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 140 ~l~s~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.|+.+.. .+.|...++........+...- .....|++++.+..|+.. ..+.|..+++... ....+...
T Consensus 527 ~LYwtD~g~~~~I~~~~~dG~~~~~lv~~~l-----~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~--~~~~v~~~- 598 (791)
T 3m0c_C 527 FMYWTDWGTPAKIKKGGLNGVDIYSLVTENI-----QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG--NRKTILED- 598 (791)
T ss_dssp EEEEEECSSSCEEEEEETTSCCEEEEECSSC-----SCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEEEC-
T ss_pred CEEEecCCCCCeEEEEecCCCceEEEEeCCC-----CCceEEEEecCCCeEEEEeCCCCcEEEEecCCC--ceEEEecC-
Confidence 5555543 2678888886444333332221 267799999887777743 6678999998642 22221111
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEE
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVS 272 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 272 (279)
.+.-....+|++.. +.++++-...+.|...|..+++.+..+........+|+
T Consensus 599 ---~~~l~~P~glav~~--~~lYwtD~~~~~I~~~dk~tG~~~~~l~~~l~~P~~i~ 650 (791)
T 3m0c_C 599 ---EKRLAHPFSLAVFE--DKVFWTDIINEAIFSANRLTGSDVNLLAENLLSPEDMV 650 (791)
T ss_dssp ---TTTTSSEEEEEEET--TEEEEEETTTTEEEEEETTTCCCCEEEECSCSCCCCEE
T ss_pred ---CCccCCCCEEEEeC--CEEEEEECCCCEEEEEeCCCCcceEEeecCCCCceeEe
Confidence 11122345666644 46666767778898899888876666654333334444
No 300
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.34 E-value=0.034 Score=43.20 Aligned_cols=178 Identities=10% Similarity=0.113 Sum_probs=98.6
Q ss_pred CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc---E-EEEecC
Q 023672 71 DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC---V-FASTTR 146 (279)
Q Consensus 71 ~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~---~-l~s~~~ 146 (279)
...+++.....+-+.+||+ .++.... ...+.+..+...|. |.-.++ + +++.-.
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~-------------------~~~g~~nnVD~r~~---~~l~g~~~dla~as~R~ 95 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHS-------------------YNTGKLNNVDIRYD---FPLNGKKVDIAAASNRS 95 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEE-------------------ECCSCEEEEEEEEE---EEETTEEEEEEEEEECS
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEE-------------------ccCCCcccEEEecc---cccCCceEeEEEEeCCC
Confidence 3456666677788999999 4443221 11133444443331 111222 2 333333
Q ss_pred --CCcEEEEEC--CCCeeeEEEecc--CccccccceeeEEE--CCC-CC-EEEEe-cCCeEEEEEccCCC---Cceeeee
Q 023672 147 --DHPIHLWDA--TTGLLRCTYRAY--DAVDEITAAFSVAF--NPT-GT-KIFAG-YNKSVRVFDVHRPG---RDFEKYS 212 (279)
Q Consensus 147 --d~~i~i~d~--~~~~~~~~~~~~--~~~~~~~~v~~~~~--~~~-~~-~l~~~-~d~~i~~~d~~~~~---~~~~~~~ 212 (279)
+++|.+|++ .++. +..+... .-......++.+++ +|. ++ ++++. .+|.+..|++...+ ...+...
T Consensus 96 ~~~n~l~vf~iDp~~~~-l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR 174 (355)
T 3amr_A 96 EGKNTIEIYAIDGKNGT-LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVR 174 (355)
T ss_dssp TTCCEEEEEEECTTTCC-EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEE
T ss_pred CCCCeEEEEEECCCCCc-eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEE
Confidence 578999976 3443 4333211 00001126778888 775 44 45554 88999999995321 2233334
Q ss_pred ecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC-----CCeEEEEEe-e-cCCCEEEEEE--ccCCC
Q 023672 213 TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED-----NMELLYVLH-G-QEGGVTHVSK--LSSAY 278 (279)
Q Consensus 213 ~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~-----~~~~~~~~~-~-~~~~v~~~~~--spdg~ 278 (279)
++. ..+.+-.|...+ ....|+.+-++.-|..++.+ +++.+..+. + ....+.+|++ .++|+
T Consensus 175 ~f~-----lgsq~EgcvvDd-~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~ 243 (355)
T 3amr_A 175 AFK-----MNSQTEGMAADD-EYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGK 243 (355)
T ss_dssp EEE-----CSSCEEEEEEET-TTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGC
T ss_pred Eec-----CCCCcceEEEcC-CCCeEEEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCC
Confidence 432 234688899998 77788888888767777754 344554442 1 2236888887 45544
No 301
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.33 E-value=0.033 Score=42.96 Aligned_cols=173 Identities=13% Similarity=0.025 Sum_probs=97.8
Q ss_pred ceEEEEEccCCC-eEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE
Q 023672 62 FLKGIKWSPDGS-SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (279)
Q Consensus 62 ~v~~~~~~~~~~-~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (279)
...++++.+.+. ++++-...+.|.+++++..... .+.......-.. ++++|.+..
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~-----------------~l~~~~~~~P~g-------iavdp~~g~ 135 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-----------------VLFWQELDQPRA-------IALDPSSGF 135 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------------EEECSSCSSEEE-------EEEEGGGTE
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEE-----------------EEEeCCCCCccE-------EEEeCCCCE
Confidence 355788887444 4445555678888888643210 011111122233 344655555
Q ss_pred EEEec--CCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeeccc
Q 023672 141 FASTT--RDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKG 216 (279)
Q Consensus 141 l~s~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~ 216 (279)
|+.+. ..+.|...++.... ...+.... ......++++|++..|+ +- ..+.|..+|+... ....+.
T Consensus 136 ly~td~~~~~~I~r~~~dG~~-~~~~~~~~----l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~--~~~~~~---- 204 (318)
T 3sov_A 136 MYWTDWGEVPKIERAGMDGSS-RFIIINSE----IYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT--NRQAVV---- 204 (318)
T ss_dssp EEEEECSSSCEEEEEETTSCS-CEEEECSS----CSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC--SCEEEE----
T ss_pred EEEEecCCCCEEEEEEcCCCC-eEEEEECC----CCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC--ceEEEe----
Confidence 55554 25678888876432 23322111 11567999999877776 43 6789999998742 112111
Q ss_pred ccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEE
Q 023672 217 NKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSK 273 (279)
Q Consensus 217 ~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~ 273 (279)
.+.......+++.. +.++.+-...+.|..+|..+++....+......+.+++.
T Consensus 205 --~~~~~~P~glav~~--~~lywtd~~~~~V~~~~~~~G~~~~~i~~~~~~P~~i~v 257 (318)
T 3sov_A 205 --KGSLPHPFALTLFE--DILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIHA 257 (318)
T ss_dssp --CSCCSCEEEEEEET--TEEEEEETTTTEEEEEETTTCCSCEEEECCCSSCCCEEE
T ss_pred --cCCCCCceEEEEeC--CEEEEEecCCCeEEEEECCCCCceEEEeCCCCCCcEEEE
Confidence 11223456777754 466777777888999998888766666543333344443
No 302
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=97.23 E-value=0.025 Score=44.07 Aligned_cols=144 Identities=15% Similarity=0.089 Sum_probs=76.9
Q ss_pred CcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccC-ccccccceeeEEECCC---CCEEEE---e-cCCeEEEEE
Q 023672 129 PHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYD-AVDEITAAFSVAFNPT---GTKIFA---G-YNKSVRVFD 200 (279)
Q Consensus 129 ~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~---~~~l~~---~-~d~~i~~~d 200 (279)
|..+++.|+|.++++--..|.|++++..+++......... ..........|+|+|+ +..|+. . .++.|.-|.
T Consensus 34 P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~R~~ 113 (347)
T 3das_A 34 PWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIVRML 113 (347)
T ss_dssp EEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEEEEE
T ss_pred ceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEEEEE
Confidence 3345668899877776658999999876665422211110 0111226789999996 344442 1 455666666
Q ss_pred ccCCC----C--ceeee-eecccccCCCCCceEEEEEccCCCcEEEEEeC-------------CCcEEEEecCCC-----
Q 023672 201 VHRPG----R--DFEKY-STLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY-------------SQTSAIYREDNM----- 255 (279)
Q Consensus 201 ~~~~~----~--~~~~~-~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~-------------dg~i~~wd~~~~----- 255 (279)
+.... . ..+.+ ..+.. ...| ....|.|.| ++.++++.+. .|.|.-.+....
T Consensus 114 ~~~~~~~~~~~~~~~~i~~~~p~-~~~H--~g~~l~fgp-DG~Lyvt~Gd~~~~~~~qd~~~~~G~IlRi~~dG~ip~~n 189 (347)
T 3das_A 114 YDEKKPSGEQLGAPDTVFRGIPK-GVIH--NGGRIAFGP-DKMLYAGTGESGDTGLSQDRKSLGGKILRMTPDGEPAPGN 189 (347)
T ss_dssp BCTTSCTTCCBCCCEEEEEEECC-CSSC--CCCCEEECT-TSCEEEECBCTTCGGGTTCTTCSTTCEEEECTTSSBCTTC
T ss_pred eCCCCcccccCCCcEEEEEcCCC-CCCc--cCccccCCC-CCCEEEEECCCCCCccccCCCCCCCEEEEEeCCCCccCCC
Confidence 65411 1 11111 11211 1233 346799999 7877777542 244444444322
Q ss_pred ----eEEEEEeecCCCEEEEEEccCCC
Q 023672 256 ----ELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 256 ----~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
..+.. .+|. ....++|+|+|+
T Consensus 190 Pf~~~~i~a-~G~R-Np~Gla~dp~G~ 214 (347)
T 3das_A 190 PFPGSPVYS-YGHR-NVQGLAWDDKQR 214 (347)
T ss_dssp SSTTCCEEE-BCCS-BCCEEEECTTCC
T ss_pred CCCCCeEEe-eCCC-CcceEEECCCCC
Confidence 11211 2343 356899999875
No 303
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.19 E-value=0.049 Score=42.13 Aligned_cols=131 Identities=10% Similarity=0.091 Sum_probs=67.4
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeec
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
.+++.+++.+...+..+-.|- .+..-..+.... ...+..+.+.+++.+++++.+|.+++.+... +.... .+
T Consensus 171 ~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~~----~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~-G~tW~---~~ 241 (327)
T 2xbg_A 171 SPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRTT----SRRLHNMGFTPDGRLWMIVNGGKIAFSDPDN-SENWG---EL 241 (327)
T ss_dssp CTTSCEEEEETTSSEEEEECT-TCSSCEEEECCS----SSCEEEEEECTTSCEEEEETTTEEEEEETTE-EEEEC---CC
T ss_pred cCCCcEEEEECCCcEEEEeCC-CCCceeECCCCC----CCccceeEECCCCCEEEEeCCceEEEecCCC-CCeeE---ec
Confidence 667777776654443444442 122111121111 1267789999999888888888887764221 11111 11
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee---cCCCEEEEEEccCC
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG---QEGGVTHVSKLSSA 277 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~---~~~~v~~~~~spdg 277 (279)
..........+.++.+.+ ++.+++++. +|.| ++....++.-..+.. ....+.++.|.+++
T Consensus 242 ~~~~~~~~~~~~~v~~~~-~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~ 304 (327)
T 2xbg_A 242 LSPLRRNSVGFLDLAYRT-PNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPD 304 (327)
T ss_dssp BCTTSSCCSCEEEEEESS-SSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETT
T ss_pred cCCcccCCcceEEEEecC-CCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCC
Confidence 100001223588899998 777777655 6666 344443432222221 12345666665443
No 304
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=97.17 E-value=0.0091 Score=46.86 Aligned_cols=146 Identities=11% Similarity=0.055 Sum_probs=74.3
Q ss_pred eCcccccCCCCcEEEEecCCCcEEEEECCCCeeeEEEeccC--ccccccceeeEEECCC---CCEEE-Ee-c-------C
Q 023672 128 FPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYD--AVDEITAAFSVAFNPT---GTKIF-AG-Y-------N 193 (279)
Q Consensus 128 ~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~v~~~~~~~~---~~~l~-~~-~-------d 193 (279)
.|..+++.|+++.|+.+...|.|++++.. +.....+.... ..........|+|+|+ +..|+ +- . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 34456678999834445567899999853 43221111100 0011125678999996 44444 32 2 2
Q ss_pred CeEEEEEccCCCCceeeeeecccc-----cCCCCCceEEEEEccCCCcEEEEEeCC-------------CcEEEEecCCC
Q 023672 194 KSVRVFDVHRPGRDFEKYSTLKGN-----KEGQAGIMSAIAFSPTHTGMLAIGSYS-------------QTSAIYREDNM 255 (279)
Q Consensus 194 ~~i~~~d~~~~~~~~~~~~~~~~~-----~~~~~~~v~~~~~sp~~~~~l~~~~~d-------------g~i~~wd~~~~ 255 (279)
..|..|++............+... ...| ....++|.| ++.++++.+.. |.|.-+|....
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h--~~~~l~~~p-dG~Lyv~~Gd~~~~~~~q~~~~~~g~I~ri~~dG~ 174 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNH--FGGRLVFDG-KGYLFIALGENNQRPTAQDLDKLQGKLVRLTDQGE 174 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSC--CCCCEEECS-SSEEEEEECCTTCGGGGGCTTSCTTEEEEEETTSC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcc--cCccEEECC-CCcEEEEECCCCCCCccCCCCCCCeEEEEECCCCC
Confidence 356667765422222211111111 1123 235799999 78766665432 45666665432
Q ss_pred e------------EEEEEe-ecCCCEEEEEEcc-CCC
Q 023672 256 E------------LLYVLH-GQEGGVTHVSKLS-SAY 278 (279)
Q Consensus 256 ~------------~~~~~~-~~~~~v~~~~~sp-dg~ 278 (279)
- ....+. ++ .....++|.| +|+
T Consensus 175 ~p~~npf~~~~~~~~~i~a~G~-rnp~gl~~d~~~g~ 210 (353)
T 2g8s_A 175 IPDDNPFIKESGVRAEIWSYGI-RNPQGMAMNPWSNA 210 (353)
T ss_dssp CCTTCTTTTSTTSCTTEEEECC-SEEEEEEEETTTTE
T ss_pred CCCCCCCcCCCCCCccEEEEcC-cCccceEEECCCCC
Confidence 0 111222 23 2468899998 553
No 305
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=97.15 E-value=0.058 Score=45.80 Aligned_cols=173 Identities=12% Similarity=-0.021 Sum_probs=97.8
Q ss_pred CceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
.....+++++.+..|+ +-...+.|.+.+++..... .+..... -.|..++++|.+.
T Consensus 84 ~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~-----------------~l~~~~l-------~~P~~Iavdp~~g 139 (619)
T 3s94_A 84 LSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRK-----------------VLFWQEL-------DQPRAIALDPSSG 139 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE-----------------EEECSSC-------SCCCCEEEETTTT
T ss_pred CCcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEE-----------------EEEeCCC-------CCCceEEEecCCC
Confidence 4678999998655444 5556789999998743210 0110111 1355567777655
Q ss_pred EEEEecC--CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe--cCCeEEEEEccCCCCceeeeeecc
Q 023672 140 VFASTTR--DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG--YNKSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 140 ~l~s~~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~--~d~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.|+.+.. .+.|...++............- .....|++++++..|+.. ..+.|..+|+... ... .+.
T Consensus 140 ~ly~tD~g~~~~I~r~~~dG~~~~~l~~~~~-----~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~--~~~---~~~ 209 (619)
T 3s94_A 140 FMYWTDWGEVPKIERAGMDGSSRFIIINSEI-----YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT--NRQ---AVV 209 (619)
T ss_dssp EEEEEECSSSCEEEEEETTSCSCEEEECSSC-----SSEEEEEEETTTTEEEEEETTTCCEEEESSSCC--EEC------
T ss_pred eEEEeccCCCCEEEEEECCCCceEEEEeCCC-----CCCcEEEEEccCCEEEEEeCCCCeEEEecCCCC--ccE---EEE
Confidence 5555543 3567767765433222222111 266899999987777743 6778999988742 111 111
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEE
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVS 272 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~ 272 (279)
.+.......+++.. + .++++-...+.|...|..+++....+........+++
T Consensus 210 ---~~~~~~P~gi~~~~-~-~ly~td~~~~~V~~~d~~tg~~~~~i~~~~~~p~~i~ 261 (619)
T 3s94_A 210 ---KGSLPHPFALTLFE-D-ILYWTDWSTHSILACNKYTGEGLREIHSDIFSPMDIH 261 (619)
T ss_dssp ---------CCCEEESS-S-EEEEECTTTCSEEEEESSSCCCCEECCSCCCCCSEEE
T ss_pred ---eCCCCCceEEEEeC-C-EEEEecCCCCEEEEEECCCCcccEEEecCCCCCcEEE
Confidence 11112234677766 4 6666666778899999888876555543322333443
No 306
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=97.12 E-value=0.1 Score=44.40 Aligned_cols=176 Identities=9% Similarity=0.002 Sum_probs=101.6
Q ss_pred CceEEEEEccCCCeEE-EeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 61 NFLKGIKWSPDGSSFL-TSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
..+.+|+|++....|+ +-..++.|..++++..... .....+ ...|..+++++.+.
T Consensus 37 ~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~------------------~v~~~g------~~~P~GlAvD~~~~ 92 (628)
T 4a0p_A 37 KEASALDFDVTDNRIYWTDISLKTISRAFMNGSALE------------------HVVEFG------LDYPEGMAVDWLGK 92 (628)
T ss_dssp SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE------------------EEECSS------CSCCCEEEEETTTT
T ss_pred CceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcE------------------EEEeCC------CCCcceEEEEeCCC
Confidence 4578999999665555 5556788988888743210 001001 01344445565544
Q ss_pred EE-EEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee--cCCeEEEEEccCCCCceeeeeecc
Q 023672 140 VF-ASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVRVFDVHRPGRDFEKYSTLK 215 (279)
Q Consensus 140 ~l-~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~--~d~~i~~~d~~~~~~~~~~~~~~~ 215 (279)
.| ++-...+.|.+.++........+...- .....|+++|....|+ +- ..+.|...++... ....+ .
T Consensus 93 ~LY~tD~~~~~I~v~~~dG~~~~~l~~~~l-----~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~--~~~~l---~ 162 (628)
T 4a0p_A 93 NLYWADTGTNRIEVSKLDGQHRQVLVWKDL-----DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGS--ERTTL---V 162 (628)
T ss_dssp EEEEEETTTTEEEEEETTSTTCEEEECSSC-----CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC--SCEEE---E
T ss_pred EEEEEECCCCEEEEEecCCCcEEEEEeCCC-----CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCC--ceEEE---E
Confidence 44 444556789999987543322221111 1567999999766666 43 3567888887642 22221 1
Q ss_pred cccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEcc
Q 023672 216 GNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLS 275 (279)
Q Consensus 216 ~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~sp 275 (279)
..-.....++++++++.++++-...+.|...|+..... ..+...-....+|++..
T Consensus 163 ----~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~l~~P~glav~~ 217 (628)
T 4a0p_A 163 ----PNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADDLPHPFGLTQYQ 217 (628)
T ss_dssp ----CSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECCSCEEEEEEET
T ss_pred ----CCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeeccCCCceEEEEEC
Confidence 12345789999994555555656677899999865443 23333333455666654
No 307
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.05 E-value=0.011 Score=47.01 Aligned_cols=127 Identities=9% Similarity=0.100 Sum_probs=78.7
Q ss_pred ceEEEEEccCCCeEEEeeCCCeEEEEeCCCCcccccc-ccccccCCCCcccceeeec-----CCCceEEEEeeCcccccC
Q 023672 62 FLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDV-NACSLAKDQDSYEASLVVT-----EGESVYDFCWFPHMSASD 135 (279)
Q Consensus 62 ~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~-----~~~~v~~~~~~~~~~~~~ 135 (279)
.|..+..+|+|++||..+ +..|.|-.+..+...... ..+.. -....+..+ ...+|..+.|+|. +
T Consensus 67 ~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~~-----~q~~ty~l~~~~~~~~s~I~qVlWHPl----~ 136 (452)
T 3pbp_A 67 DTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQDA-----FQIFHYSIDEEEVGPKSSIKKVLFHPK----S 136 (452)
T ss_dssp TTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHHT-----TEEEEEEGGGCC--CCCCEEEEEECTT----B
T ss_pred ceeEEEECCCCCEEEEec-CCeEEEEEecCccccCcccccccc-----cceeEEEcCCcccCCCCceeEEEeccc----c
Confidence 577899999999999876 458999998843221110 00000 000011111 2467999999997 4
Q ss_pred CCCcEEEEecCCCcEEEEECCCCe--eeEEEeccCc----cccccceeeEEECCCCCEEEE-e--cCCeEEEE
Q 023672 136 PTSCVFASTTRDHPIHLWDATTGL--LRCTYRAYDA----VDEITAAFSVAFNPTGTKIFA-G--YNKSVRVF 199 (279)
Q Consensus 136 ~~~~~l~s~~~d~~i~i~d~~~~~--~~~~~~~~~~----~~~~~~v~~~~~~~~~~~l~~-~--~d~~i~~~ 199 (279)
.++..|++-..|+.|++||+.... +. .+..... ......|.+++|.+++-.|++ . ..|.|+-.
T Consensus 137 ~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 137 YRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAF 208 (452)
T ss_dssp GGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEE
T ss_pred CCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEE
Confidence 457789999999999999998632 22 3321110 011136889999998765553 2 56777654
No 308
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.83 E-value=0.077 Score=38.27 Aligned_cols=156 Identities=12% Similarity=0.063 Sum_probs=77.2
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeC-cccccCCCCc
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFP-HMSASDPTSC 139 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~-~~~~~~~~~~ 139 (279)
..+..++|+|+|.+.++ .+|.+.-.+..+.... ........|-...|.- ..+.|.|+|.
T Consensus 41 ~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~------------------~W~~s~t~IG~~Gw~~F~a~~fD~~G~ 100 (236)
T 1tl2_A 41 SNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDND------------------NWMGRAKKIGNGGWNQFQFLFFDPNGY 100 (236)
T ss_dssp TTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTC------------------CHHHHCEEEECSCGGGCSEEEECTTSC
T ss_pred ccceeEEECCCccEEEE--eCCeEEEECCCCCCcc------------------cccccccEecccccccceEEEECCCCC
Confidence 46789999999986666 6776555444321110 0000011111101100 1134588998
Q ss_pred EEEEecCCCcEEEEECCCCeeeE-----EEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCC-Cceeeeee
Q 023672 140 VFASTTRDHPIHLWDATTGLLRC-----TYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPG-RDFEKYST 213 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~~~~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~-~~~~~~~~ 213 (279)
+.++ .||.|.-++..+..... .......- ..+..|.|.|+|.+.++. |+.++-...-+.. ...-...+
T Consensus 101 LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw---~~~~~lff~p~G~Lyav~-dg~lyr~~~P~~~~~~wl~~~~ 174 (236)
T 1tl2_A 101 LYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGW---SGFKFLFFHPNGYLYAVH-GQQFYKALPPVSNQDNWLARAT 174 (236)
T ss_dssp EEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSG---GGEEEEEECTTSCEEEEE-TTEEEEECCCSSTTCCHHHHCE
T ss_pred EEEe--CCCEEEEeCCCcCCCCceeccccEeccCCC---CceEEEEECCCceEEEEe-CCcEEecCCCCCCCcccccccc
Confidence 7777 46888777753321110 11111000 156899999999999887 8885432221100 00000001
Q ss_pred cccccCCCCCceEEEEEccCCCcEEEEEeCCCcE
Q 023672 214 LKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTS 247 (279)
Q Consensus 214 ~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i 247 (279)
... ...-....-+.|.| ++.+.+.. ++.+
T Consensus 175 ~~g--~~g~~~yr~l~f~~-~G~l~~v~--~g~~ 203 (236)
T 1tl2_A 175 KIG--QGGWDTFKFLFFSS-VGTLFGVQ--GGKF 203 (236)
T ss_dssp EEE--SSSGGGEEEEEECT-TSCEEEEE--TTEE
T ss_pred eec--cCCcceEEEEEECC-CCcEEEEe--CCeE
Confidence 100 12222344567888 77766665 6644
No 309
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.80 E-value=0.2 Score=42.58 Aligned_cols=161 Identities=7% Similarity=-0.004 Sum_probs=91.7
Q ss_pred CCceEEEEEccCCCeEEEe-eCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 60 NNFLKGIKWSPDGSSFLTS-SEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~-~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
-....+|+|++.+..|+.+ ...+.|..++++...... .+....-. .|..+++++.+
T Consensus 39 ~~~~~~ld~~~~~~~ly~sD~~~~~I~r~~~~g~~~~~----------------~v~~~~~~-------~P~GlAvD~~~ 95 (619)
T 3s94_A 39 LEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQ----------------NVVVSGLL-------SPDGLACDWLG 95 (619)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEEEC-----CE----------------EEECSSCS-------CEEEEEEETTT
T ss_pred CCceEEEEEEeCCCEEEEEECCCCeEEEEEccCCCceE----------------EEEeCCCC-------CcCeEEEEecC
Confidence 3457899999866666544 446788888886431000 01111101 23444556644
Q ss_pred c-EEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee--cCCeEEEEEccCCCCceeeeeec
Q 023672 139 C-VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 139 ~-~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~--~d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
. ++++-...+.|.+.++........+...-. ....|+++|.+..|+ +- ..+.|...++.. .....+.
T Consensus 96 ~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~-----~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG--~~~~~l~-- 166 (619)
T 3s94_A 96 EKLYWTDSETNRIEVSNLDGSLRKVLFWQELD-----QPRAIALDPSSGFMYWTDWGEVPKIERAGMDG--SSRFIII-- 166 (619)
T ss_dssp TEEEEEETTTTEEEEEETTSCSCEEEECSSCS-----CCCCEEEETTTTEEEEEECSSSCEEEEEETTS--CSCEEEE--
T ss_pred CEEEEEeCCCCEEEEEECCCCCEEEEEeCCCC-----CCceEEEecCCCeEEEeccCCCCEEEEEECCC--CceEEEE--
Confidence 4 444555678899999875433222222211 567899999866665 43 346777777763 2222211
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCe
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNME 256 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~ 256 (279)
...-.....++++++++.++++-...+.|...|+....
T Consensus 167 ----~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~ 204 (619)
T 3s94_A 167 ----NSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN 204 (619)
T ss_dssp ----CSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE
T ss_pred ----eCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc
Confidence 11234578999999556666666667789999886543
No 310
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=96.68 E-value=0.05 Score=42.61 Aligned_cols=99 Identities=15% Similarity=0.209 Sum_probs=59.7
Q ss_pred ceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccC---CCcEEEEEeCC-----Cc
Q 023672 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT---HTGMLAIGSYS-----QT 246 (279)
Q Consensus 175 ~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~~l~~~~~d-----g~ 246 (279)
....++|.|+|+++++-.++.|++++ . +. ...+..+. ...........++++|+ ++.++++-..+ +.
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~--~-g~-~~~~~~~~-v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~~~ 106 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR--E-GR-LSTYAELS-VYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLRNQ 106 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE--T-TE-EEEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE--C-CC-ccEeecce-EeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCccE
Confidence 55789999999977676779999998 3 22 12222221 11222346789999993 35555554433 56
Q ss_pred EEEEecCCCe-----EE-EEEee---cCCCEEEEEEccCCC
Q 023672 247 SAIYREDNME-----LL-YVLHG---QEGGVTHVSKLSSAY 278 (279)
Q Consensus 247 i~~wd~~~~~-----~~-~~~~~---~~~~v~~~~~spdg~ 278 (279)
|..|+...+. .+ ..+.. .......|+|.|||.
T Consensus 107 v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~ 147 (352)
T 2ism_A 107 VVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGM 147 (352)
T ss_dssp EEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSC
T ss_pred EEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCC
Confidence 8888876432 12 22331 112346899999985
No 311
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=96.51 E-value=0.12 Score=37.26 Aligned_cols=108 Identities=13% Similarity=-0.015 Sum_probs=60.3
Q ss_pred ccCCCCcEEEEecCCCcEEEEECCCCee------eEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCC
Q 023672 133 ASDPTSCVFASTTRDHPIHLWDATTGLL------RCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGR 206 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d~~i~i~d~~~~~~------~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~ 206 (279)
+|+|++.+.++ .+|.+.-.+..+... -..+- ... - ....++.|.|+|.+.++ .||.|+-++--+.+.
T Consensus 47 af~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG-~~G--w-~~F~a~~fD~~G~LYav-~dG~iyr~~pP~~~~ 119 (236)
T 1tl2_A 47 FLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIG-NGG--W-NQFQFLFFDPNGYLYAV-SKDKLYKASPPQSDT 119 (236)
T ss_dssp EECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEE-CSC--G-GGCSEEEECTTSCEEEE-ETTEEEEESCCCSTT
T ss_pred EECCCccEEEE--eCCeEEEECCCCCCcccccccccEec-ccc--c-ccceEEEECCCCCEEEe-CCCEEEEeCCCcCCC
Confidence 55888876665 677776666544211 11111 100 0 13468999999988888 779888777533221
Q ss_pred ceeeee-ecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 207 DFEKYS-TLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 207 ~~~~~~-~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
...... +... ..--..+..|.+.| +|.+.+.. |+.++-+..
T Consensus 120 ~~Wl~~a~~vg--~~gw~~~~~lff~p-~G~Lyav~--dg~lyr~~~ 161 (236)
T 1tl2_A 120 DNWIARATEVG--SGGWSGFKFLFFHP-NGYLYAVH--GQQFYKALP 161 (236)
T ss_dssp CCHHHHSEEEE--CSSGGGEEEEEECT-TSCEEEEE--TTEEEEECC
T ss_pred CceeccccEec--cCCCCceEEEEECC-CceEEEEe--CCcEEecCC
Confidence 110000 0000 11113578999999 88777666 777544433
No 312
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=96.15 E-value=0.089 Score=41.24 Aligned_cols=99 Identities=12% Similarity=0.089 Sum_probs=59.2
Q ss_pred ceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccC---CCcEEEEEeC---C----
Q 023672 175 AAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPT---HTGMLAIGSY---S---- 244 (279)
Q Consensus 175 ~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~---~~~~l~~~~~---d---- 244 (279)
....|+|.|+|+++++-.++.|+++|. . +. ..+..+. ...........++++|+ ++.++++-+. +
T Consensus 30 ~P~~ia~~pdG~l~V~e~~g~I~~~d~-~-G~--~~~~~~~-v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~ 104 (354)
T 3a9g_A 30 VPWSIAPLGGGRYLVTERPGRLVLISP-S-GK--KLVASFD-VANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIR 104 (354)
T ss_dssp CEEEEEEEETTEEEEEETTTEEEEECS-S-CE--EEEEECC-CCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEE
T ss_pred CCeEEEEcCCCeEEEEeCCCEEEEEeC-C-Cc--eEeeccc-eeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcc
Confidence 567899999998777767799999973 2 22 2222221 11122346789999994 3655555442 3
Q ss_pred CcEEEEecCCC-------eEE-EEEeec-CCCEEEEEEccCCC
Q 023672 245 QTSAIYREDNM-------ELL-YVLHGQ-EGGVTHVSKLSSAY 278 (279)
Q Consensus 245 g~i~~wd~~~~-------~~~-~~~~~~-~~~v~~~~~spdg~ 278 (279)
+.|..|+.... +.+ ..+... ......|+|.|||+
T Consensus 105 ~~v~r~~~~~~~~~~~~~~~l~~~~~~~~~h~~~~l~~~pDG~ 147 (354)
T 3a9g_A 105 NRVIRGRLDGSTFKLKEVKTLIDGIPGAYIHNGGRIRFGPDGM 147 (354)
T ss_dssp EEEEEEEECSSSCCEEEEEEEEEEEECCSSCCCCCEEECTTSC
T ss_pred eEEEEEEECCCCcCcCccEEEEEcCCCCCCcCCceEEECCCCc
Confidence 56777776543 111 223311 12346799999985
No 313
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.07 E-value=0.58 Score=39.84 Aligned_cols=167 Identities=13% Similarity=0.021 Sum_probs=95.0
Q ss_pred eEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE-EEEecCCCcEEE
Q 023672 74 SFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV-FASTTRDHPIHL 152 (279)
Q Consensus 74 ~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~-l~s~~~d~~i~i 152 (279)
+|+.+ ....|+..++++..... .+....-.....+.| ++.+.. +.+-..++.|..
T Consensus 8 ~Ll~s-~~~~I~~i~l~~~~~~~----------------~~~~~~~~~~~~l~~-------d~~~~~lywtD~~~~~I~r 63 (628)
T 4a0p_A 8 FLLFS-RRADIRRISLETNNNNV----------------AIPLTGVKEASALDF-------DVTDNRIYWTDISLKTISR 63 (628)
T ss_dssp EEEEE-ETTEEEEEESSCTTCEE----------------ECCCCSCSCEEEEEE-------ETTTTEEEEEETTTTEEEE
T ss_pred EEEEE-eCCcEEEEECCCCCcce----------------EEEcCCCCceEEEEE-------ECCCCEEEEEECCCCeEEE
Confidence 44444 35678888887532110 011111234555655 444444 445556788988
Q ss_pred EECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEE
Q 023672 153 WDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAF 230 (279)
Q Consensus 153 ~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 230 (279)
+++........+..... .+..+++.+.+..|+ +- ..+.|.+.++... . ...+ + ...-.....+++
T Consensus 64 ~~~~g~~~~~v~~~g~~-----~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~-~-~~~l--~----~~~l~~P~~iav 130 (628)
T 4a0p_A 64 AFMNGSALEHVVEFGLD-----YPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ-H-RQVL--V----WKDLDSPRALAL 130 (628)
T ss_dssp EETTSCSCEEEECSSCS-----CCCEEEEETTTTEEEEEETTTTEEEEEETTST-T-CEEE--E----CSSCCCEEEEEE
T ss_pred EECCCCCcEEEEeCCCC-----CcceEEEEeCCCEEEEEECCCCEEEEEecCCC-c-EEEE--E----eCCCCCcccEEE
Confidence 99876544333332211 456899988776666 44 6789999998752 1 1111 1 112235789999
Q ss_pred ccCCCcEEEEE-eCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCCC
Q 023672 231 SPTHTGMLAIG-SYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSAY 278 (279)
Q Consensus 231 sp~~~~~l~~~-~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg~ 278 (279)
.|.++.++++- +..+.|...++........+. .-....+|++.++++
T Consensus 131 dp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~-~~~~P~GlalD~~~~ 178 (628)
T 4a0p_A 131 DPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP-NVGRANGLTIDYAKR 178 (628)
T ss_dssp ETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC-SCSSEEEEEEETTTT
T ss_pred ccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC-CCCCcceEEEccccC
Confidence 99455555543 235678888876544332232 345678899988653
No 314
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=95.48 E-value=0.67 Score=36.21 Aligned_cols=56 Identities=9% Similarity=0.071 Sum_probs=37.5
Q ss_pred CceEEEEEccC------CCcEEEEEeCCCcEEEEecCCCeEEEEEe---ecCCCEEEEEEccCCC
Q 023672 223 GIMSAIAFSPT------HTGMLAIGSYSQTSAIYREDNMELLYVLH---GQEGGVTHVSKLSSAY 278 (279)
Q Consensus 223 ~~v~~~~~sp~------~~~~l~~~~~dg~i~~wd~~~~~~~~~~~---~~~~~v~~~~~spdg~ 278 (279)
..+..+.|... ++.++++.-..+.|...++..++...... .....+.++++.|||.
T Consensus 271 ~ap~G~~~y~g~~fp~~~g~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~rp~~v~~~pdG~ 335 (353)
T 2g8s_A 271 PAVSGMAFYNSDKFPQWQQKLFIGALKDKDVIVMSVNGDKVTEDGRILTDRGQRIRDVRTGPDGY 335 (353)
T ss_dssp CCEEEEEEECCSSSGGGTTEEEEEETTTTEEEEEEEETTEEEEEEEESGGGCCCEEEEEECTTSC
T ss_pred cCcceeEEECCccCcccCCcEEEEEccCCEEEEEEeCCCeEeeeEEcccCCCCceeEEEECCCCc
Confidence 35677888641 36677777677788888887665443322 2234789999999985
No 315
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=95.24 E-value=0.36 Score=36.83 Aligned_cols=118 Identities=4% Similarity=-0.015 Sum_probs=59.9
Q ss_pred CCCCcEEEEecCC--------------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee--cCCeEE
Q 023672 135 DPTSCVFASTTRD--------------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG--YNKSVR 197 (279)
Q Consensus 135 ~~~~~~l~s~~~d--------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~--~d~~i~ 197 (279)
++++.+|+.+... ..|+..++..++... +... .+..|+++++.|+ +. .++.-.
T Consensus 61 ~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~-l~~~---------~~~~~s~~g~~Iy~~~~~~~~~~~ 130 (302)
T 3s25_A 61 NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTV-LDPD---------PCIYASLIGNYIYYLHYDTQTATS 130 (302)
T ss_dssp EECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEE-EECS---------CEEEEEEETTEEEEEEESSSSCEE
T ss_pred EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceE-eecC---------CccEEEEeCCEEEEEeecCCCCce
Confidence 5567777666432 357777777664322 2211 1346788888888 43 244444
Q ss_pred EEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEE-EEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccC
Q 023672 198 VFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLA-IGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSS 276 (279)
Q Consensus 198 ~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~-~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spd 276 (279)
||-+...+...+.+. .+. + ..++| .+..|+ +......|..-++..+.....+. +... ..++|+
T Consensus 131 Iy~~~~dGs~~~~lt-------~~~--~--~~~~~-~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~---~~~~-~~~~P~ 194 (302)
T 3s25_A 131 LYRIRIDGEEKKKIK-------NHY--L--FTCNT-SDRYFYYNNPKNGQLYRYDTASQSEALFYD---CNCY-KPVVLD 194 (302)
T ss_dssp EEEEETTSCCCEEEE-------SSC--C--CCSEE-ETTEEEEECTTTCCEEEEETTTTEEEEEEC---SCEE-EEEEEE
T ss_pred EEEEECCCCCeEEEe-------CCC--c--eEeeE-ECCEEEEEeCCCceEEEEECCCCCEEEEeC---CCcc-ceeeec
Confidence 444443333333221 111 1 34567 444555 44335678888876665433332 2222 335576
Q ss_pred CC
Q 023672 277 AY 278 (279)
Q Consensus 277 g~ 278 (279)
|+
T Consensus 195 g~ 196 (302)
T 3s25_A 195 DT 196 (302)
T ss_dssp TT
T ss_pred CC
Confidence 64
No 316
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.17 E-value=0.15 Score=39.52 Aligned_cols=116 Identities=9% Similarity=0.038 Sum_probs=69.2
Q ss_pred cEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEE---ECCCCCEEEE--ecCCeEEEEEccCCCCceeeeee
Q 023672 139 CVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVA---FNPTGTKIFA--GYNKSVRVFDVHRPGRDFEKYST 213 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~---~~~~~~~l~~--~~d~~i~~~d~~~~~~~~~~~~~ 213 (279)
..++.++.||.|.-+|..+|+.+..+..... .++.... ...++..++. ..||.+..++..++ ...... .
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~----~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G-~~~~~~-~ 84 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPENF----QPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG-LQKLPL-S 84 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGGS----CCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE-EEEEEE-E
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCcc----CCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC-cEEeee-c
Confidence 3788899999999999999999999876510 0111111 0012334443 37899999998763 111111 1
Q ss_pred cccccCCCCCceEE---EEE-----ccCCCcEEEEEeCCCcEEEEecCCCeEEEEEee
Q 023672 214 LKGNKEGQAGIMSA---IAF-----SPTHTGMLAIGSYSQTSAIYREDNMELLYVLHG 263 (279)
Q Consensus 214 ~~~~~~~~~~~v~~---~~~-----sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 263 (279)
.... ....++.. ... +. .+..+++|+.+|.+.-.|+++|+.+..+..
T Consensus 85 ~~~l--v~~SP~~~~~~pvv~~~~~~~-~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~ 139 (339)
T 2be1_A 85 IRQL--VSTSPLHLKTNIVVNDSGKIV-EDEKVYTGSMRTIMYTINMLNGEIISAFGP 139 (339)
T ss_dssp HHHH--HTTCSEEEECC-----------CCEEEEECEEEEEEEEEETTTCCEEEEEST
T ss_pred cccc--eeccccccCCCceeecccccc-cCCEEEEEecCCEEEEEECCCCcEEEEEec
Confidence 1100 01112211 000 01 345788999999999999999999888763
No 317
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=95.07 E-value=0.91 Score=35.37 Aligned_cols=32 Identities=19% Similarity=0.251 Sum_probs=24.8
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEeCCCC
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPEN 92 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~ 92 (279)
..-+.|+|.|||+++++--..|.|++++..++
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCC
Confidence 34689999999987766655899999986544
No 318
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=95.03 E-value=0.39 Score=39.84 Aligned_cols=89 Identities=9% Similarity=0.066 Sum_probs=58.7
Q ss_pred ceeeEEECCCCCEEE-Ee-cCCeEEEEEccCC-----CCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcE
Q 023672 175 AAFSVAFNPTGTKIF-AG-YNKSVRVFDVHRP-----GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTS 247 (279)
Q Consensus 175 ~v~~~~~~~~~~~l~-~~-~d~~i~~~d~~~~-----~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i 247 (279)
....+..+|||++++ +| .+.++.++|++.- ++.......+..... -.-.....+|.+ +|....+---|..|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e-~GlGPlHt~Fd~-~G~aYTtlfidSqv 401 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE-LGLGPLHTTFDG-RGNAYTTLFIDSQV 401 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB-CCSCEEEEEECS-SSEEEEEETTTTEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc-CCCcccEEEECC-CCceEeeeeecceE
Confidence 566899999999998 56 8999999999841 000000001111111 233567889999 88666667789999
Q ss_pred EEEecCCC----------eEEEEEeecC
Q 023672 248 AIYREDNM----------ELLYVLHGQE 265 (279)
Q Consensus 248 ~~wd~~~~----------~~~~~~~~~~ 265 (279)
.-|++... ..+..+..|-
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~Y 429 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHY 429 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSS
T ss_pred EEEeccHHHHHhcCccCCeeeecccccc
Confidence 99999754 4566666554
No 319
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=95.00 E-value=0.91 Score=35.02 Aligned_cols=197 Identities=13% Similarity=0.139 Sum_probs=108.8
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCccccee
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASL 114 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (279)
.+.+.|+..+.... +....-+. .-.+|..+.+|.=. ..++.|+|+++......
T Consensus 50 ~VvIiDl~n~~~~~-----Rrpi~Ads----AIMnP~~~ViALra-g~~LQiFnletK~klks----------------- 102 (365)
T 2xzh_A 50 QVVIIDMNDPSNPI-----RRPISADS----AIMNPASKVIALKA-GKTLQIFNIEMKSKMKA----------------- 102 (365)
T ss_dssp EEEEEETTSTTSCE-----EEECCCSE----EEECSSSSEEEEEE-TTEEEEEETTTTEEEEE-----------------
T ss_pred EEEEEECCCCCCcc-----ccccccce----eeeCCCccEEEEec-CCeEEEechHHhhhhcc-----------------
Confidence 46667776654321 11222222 33478777776554 67899999997643211
Q ss_pred eecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCC-CeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-
Q 023672 115 VVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG- 191 (279)
Q Consensus 115 ~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~- 191 (279)
..-.+.|.-..| ++++ .|+..+ +..|.-|++.. ..+.+.+..+..... ..|..-..+++.++++ +|
T Consensus 103 -~~~~e~VvfWkW------is~~--~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~~-~QIInY~~d~~~kW~~l~GI 171 (365)
T 2xzh_A 103 -HTMTDDVTFWKW------ISLN--TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLAG-CQIINYRTDAKQKWLLLTGI 171 (365)
T ss_dssp -EECSSCEEEEEE------CSSS--EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGTT-CEEEEEEECTTSCEEEEEEE
T ss_pred -eecCCccEEEEe------cCCC--eEEEEc-CCcEEEEcccCCCCCceeeecchhccc-ceEEEEEECCCCCEEEEEeE
Confidence 112346766777 2333 333333 45788898864 356666665554432 2555556666666665 33
Q ss_pred --cC----CeEEEEEccCCCC--------------------cee------------eeeec-------------------
Q 023672 192 --YN----KSVRVFDVHRPGR--------------------DFE------------KYSTL------------------- 214 (279)
Q Consensus 192 --~d----~~i~~~d~~~~~~--------------------~~~------------~~~~~------------------- 214 (279)
.+ |.+.+|..+..-. +.. .+..+
T Consensus 172 ~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi 251 (365)
T 2xzh_A 172 SAQQNRVVGAMQLYSVDRKVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDV 251 (365)
T ss_dssp EEETTEEEEEEEEEETTTTEEEEECCSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEE
T ss_pred eccCCccceeEEEEeecccccceeeeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCccccccee
Confidence 12 4556665554200 000 00000
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEE
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTH 270 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~ 270 (279)
....+...+...++..|+ .-.++..-+.-|.|++||+.++.+++.-+-...+|..
T Consensus 252 ~fppea~~DFPVamqvs~-kygviyviTK~G~ihlyDleTgt~i~~nrIS~d~iF~ 306 (365)
T 2xzh_A 252 FFPPEAQNDFPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYMNRISGETIFV 306 (365)
T ss_dssp CCCTTCTTCCEEEEEEET-TTTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEE
T ss_pred eCCccccCCceEEEEecc-cCCEEEEEeCCcEEEEEEcccCcEEEEeccCCCceEE
Confidence 000011233455677777 6667777888999999999999988776655555543
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=94.99 E-value=1.2 Score=36.24 Aligned_cols=102 Identities=8% Similarity=0.059 Sum_probs=58.9
Q ss_pred ceeeEEECCCCCEEEEecC-CeEEEEEccCCCCceeeeeecccccC--CCCCceEEEEEccC---CCcEEEEEeC-----
Q 023672 175 AAFSVAFNPTGTKIFAGYN-KSVRVFDVHRPGRDFEKYSTLKGNKE--GQAGIMSAIAFSPT---HTGMLAIGSY----- 243 (279)
Q Consensus 175 ~v~~~~~~~~~~~l~~~~d-~~i~~~d~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~sp~---~~~~l~~~~~----- 243 (279)
..+.|+|.|+|+++++... +.|++++...+ . ...+..+..... ........|+|+|+ ++.+.++-+.
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g-~-~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~ 105 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESG-S-VKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKS 105 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTC-C-EEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCC-c-EeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCC
Confidence 5579999999998887755 47888876542 2 222222322111 12456789999994 4555555432
Q ss_pred -------CCcEEEEecCCC-------eEEE-EEee-cCCCEEEEEEccCCC
Q 023672 244 -------SQTSAIYREDNM-------ELLY-VLHG-QEGGVTHVSKLSSAY 278 (279)
Q Consensus 244 -------dg~i~~wd~~~~-------~~~~-~~~~-~~~~v~~~~~spdg~ 278 (279)
...|.-|+.... +.+. .+.. .......|+|.|||+
T Consensus 106 ~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~ 156 (454)
T 1cru_A 106 TDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQK 156 (454)
T ss_dssp --CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSC
T ss_pred CccccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCe
Confidence 234555554322 1121 2322 123578999999985
No 321
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=94.64 E-value=2.7 Score=38.68 Aligned_cols=175 Identities=15% Similarity=0.205 Sum_probs=95.6
Q ss_pred eeeEecCCCCcccceeeeeeccCCCCCceEEEEE---ccC-CCeEEEee----------CCCeEEEEeCCCCcccccccc
Q 023672 35 PLIRFDVPPHRTYHFYNQFRTSSIPNNFLKGIKW---SPD-GSSFLTSS----------EDKTLRIFSLPENGISYDVNA 100 (279)
Q Consensus 35 ~~~~~d~~~~~~~~~~~~~~~~~~h~~~v~~~~~---~~~-~~~l~t~~----------~dg~i~iwd~~~~~~~~~~~~ 100 (279)
-+.+.|..+.+....+. +. ....+.|++. ..+ ..+|++|+ ..|.|.+|++..++.
T Consensus 808 ~i~lidp~t~~~i~~~~----l~-~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~kL------ 876 (1158)
T 3ei3_A 808 NLLIIDQHTFEVLHAHQ----FL-QNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDGKL------ 876 (1158)
T ss_dssp EEEEEETTTCCEEEEEE----CC-TTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETTEE------
T ss_pred EEEEEeCCCCeEEEEEe----CC-CCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECCEE------
Confidence 45566766655443221 11 2234555553 332 46888776 347889998863211
Q ss_pred ccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCeeeE-EEeccCccccccceeeE
Q 023672 101 CSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGLLRC-TYRAYDAVDEITAAFSV 179 (279)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~~~~-~~~~~~~~~~~~~v~~~ 179 (279)
.......-.+++++++- + +|.+++.. ..+|++|++...+.+. ...... .+..+
T Consensus 877 ----------~lv~~~~v~g~v~al~~------~--~g~Lla~i--g~~l~vy~l~~~~~L~~~~~~~~------~i~~~ 930 (1158)
T 3ei3_A 877 ----------QTVAEKEVKGAVYSMVE------F--NGKLLASI--NSTVRLYEWTTEKELRTECNHYN------NIMAL 930 (1158)
T ss_dssp ----------EEEEEEEESSCEEEEEE------E--TTEEEEEE--TTEEEEEEECTTSCEEEEEEECC------CSCEE
T ss_pred ----------EEEEEEEcCCcCEEEee------e--CCEEEEEc--CCEEEEEECCCCceEEEEeeccc------cEEEE
Confidence 11122223457777753 1 45444433 5789999998665433 111111 22333
Q ss_pred EECCCCCEEEEe-cCCeEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC
Q 023672 180 AFNPTGTKIFAG-YNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (279)
Q Consensus 180 ~~~~~~~~l~~~-~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~ 253 (279)
.....++++++| .-..|.++..+.....+..+.. ......++++.+-. +. .++.+..+|.|.+....
T Consensus 931 ~l~~~~~~I~vgD~~~Sv~~~~y~~~~~~L~~~a~-----D~~~~~vta~~~ld-~~-t~l~aD~~gNl~vl~~~ 998 (1158)
T 3ei3_A 931 YLKTKGDFILVGDLMRSVLLLAYKPMEGNFEEIAR-----DFNPNWMSAVEILD-DD-NFLGAENAFNLFVCQKD 998 (1158)
T ss_dssp EEEEETTEEEEEESSBCEEEEEEETTTTEEEEEEE-----CCSCBCEEEEEEEE-TT-EEEEEETTSEEEEEEEC
T ss_pred EEeccCCEEEEEEhhheEEEEEEEcCCCeEEEEEe-----ecccccEEEEEEEc-cC-cEEEEcCCCcEEEEecC
Confidence 333456778877 5566666655543333333222 34456788888866 44 56678889999888654
No 322
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.48 E-value=1.5 Score=35.26 Aligned_cols=175 Identities=14% Similarity=0.148 Sum_probs=100.5
Q ss_pred EEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEec
Q 023672 66 IKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFASTT 145 (279)
Q Consensus 66 ~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~ 145 (279)
.-.+|..+.+|.=. ..++.|+|+++...... ..-.+.|.-..|- +++ .|+..+
T Consensus 71 AIMnP~~~iiALra-g~~lQiFnle~K~klks------------------~~~~e~VvfWkWi------s~~--~l~lVT 123 (494)
T 1bpo_A 71 AIMNPASKVIALKA-GKTLQIFNIEMKSKMKA------------------HTMTDDVTFWKWI------SLN--TVALVT 123 (494)
T ss_dssp EEECSSSSCEEEEE-TTEEEEEETTTTEEEEE------------------EECSSCCCEEEEE------ETT--EEEEEC
T ss_pred eeeCCCCcEEEEec-CCeEEEEchHHhhhhcc------------------eecCCCceEEEec------CCC--eEEEEc
Confidence 34677777776544 67999999997643211 1112356556662 333 344333
Q ss_pred CCCcEEEEECCC-CeeeEEEeccCccccccceeeEEECCCCCEEE-Ee---c----CCeEEEEEccCCCC----------
Q 023672 146 RDHPIHLWDATT-GLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG---Y----NKSVRVFDVHRPGR---------- 206 (279)
Q Consensus 146 ~d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~---~----d~~i~~~d~~~~~~---------- 206 (279)
+..|.-|++.. ..+.+.+..+..... ..|..-..+++.++++ +| . .|.+.+|..+..-.
T Consensus 124 -~taVyHWsi~~~s~P~kvFdR~~~L~~-~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa~F 201 (494)
T 1bpo_A 124 -DNAVYHWSMEGESQPVKMFDRHSSLAG-CQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAASF 201 (494)
T ss_dssp -SSEEEEEESSSSCCCEEEEECCGGGTT-CEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSEEEE
T ss_pred -CCeeEEecccCCCCchhheecchhccc-ceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeeeeee
Confidence 55788899864 356666665554432 3566666677777766 33 1 24566666654210
Q ss_pred ----------------------------------------ceee-eeecccccCCCCCceEEEEEccCCCcEEEEEeCCC
Q 023672 207 ----------------------------------------DFEK-YSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ 245 (279)
Q Consensus 207 ----------------------------------------~~~~-~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg 245 (279)
++.. ...+........+...++..|+ .-.++..-+.-|
T Consensus 202 ~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~-kygviyviTK~G 280 (494)
T 1bpo_A 202 AQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISE-KHDVVFLITKYG 280 (494)
T ss_dssp EEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEET-TTTEEEEEETTS
T ss_pred EEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecc-cCCEEEEEecCc
Confidence 0000 0000000012234455777787 666788888899
Q ss_pred cEEEEecCCCeEEEEEeecCCCEEE
Q 023672 246 TSAIYREDNMELLYVLHGQEGGVTH 270 (279)
Q Consensus 246 ~i~~wd~~~~~~~~~~~~~~~~v~~ 270 (279)
.|++||+.++.+++.-+-...+|..
T Consensus 281 ~i~lyDleTgt~i~~nrIs~~~iF~ 305 (494)
T 1bpo_A 281 YIHLYDLETGTCIYMNRISGETIFV 305 (494)
T ss_dssp EEEEEETTTCCEEEEEECCSSCEEE
T ss_pred eEEEEecccceeeeeecccCCceEE
Confidence 9999999999988765544444433
No 323
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=94.08 E-value=1.9 Score=34.76 Aligned_cols=144 Identities=8% Similarity=0.122 Sum_probs=78.0
Q ss_pred eeeEecCCC-CcccceeeeeeccCCCCCceEEEEEccCCCeEEEee-------CCCeEEEEeCCCCccccccccccccCC
Q 023672 35 PLIRFDVPP-HRTYHFYNQFRTSSIPNNFLKGIKWSPDGSSFLTSS-------EDKTLRIFSLPENGISYDVNACSLAKD 106 (279)
Q Consensus 35 ~~~~~d~~~-~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~ 106 (279)
.++.|++.. ..+...+.....+. ...|..-..+++.++++..+ -.|.+.+|..+.+...
T Consensus 126 aVyHWsi~~~s~P~kvFdR~~~L~--~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ----------- 192 (494)
T 1bpo_A 126 AVYHWSMEGESQPVKMFDRHSSLA--GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQ----------- 192 (494)
T ss_dssp EEEEEESSSSCCCEEEEECCGGGT--TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEE-----------
T ss_pred eeEEecccCCCCchhheecchhcc--cceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccc-----------
Confidence 567787753 33444444444443 35688888899999887432 2477889998865321
Q ss_pred CCcccceeeecCCCceEEEEeeCcccccCC-CCcEEEEecC---CCcEEEEECCCC--------eeeEEEeccCcccccc
Q 023672 107 QDSYEASLVVTEGESVYDFCWFPHMSASDP-TSCVFASTTR---DHPIHLWDATTG--------LLRCTYRAYDAVDEIT 174 (279)
Q Consensus 107 ~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~-~~~~l~s~~~---d~~i~i~d~~~~--------~~~~~~~~~~~~~~~~ 174 (279)
...+|......+.. .-++ ....++.+.. .+++++.++... +....+..+.... ..
T Consensus 193 -------~ieGhaa~F~~~~~-----~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~-~D 259 (494)
T 1bpo_A 193 -------PIEGHAASFAQFKM-----EGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ-ND 259 (494)
T ss_dssp -------EECCSEEEEEEEEC-----TTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTST-TC
T ss_pred -------hheeeeeeeEEEec-----CCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccc-cC
Confidence 11111111111111 0001 1123333332 368888888543 1111111111111 11
Q ss_pred ceeeEEECCCCCEEE-EecCCeEEEEEccCC
Q 023672 175 AAFSVAFNPTGTKIF-AGYNKSVRVFDVHRP 204 (279)
Q Consensus 175 ~v~~~~~~~~~~~l~-~~~d~~i~~~d~~~~ 204 (279)
..-++..++....++ ...-|.+++||+.++
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleTg 290 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETG 290 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTC
T ss_pred ceeEEEecccCCEEEEEecCceEEEEecccc
Confidence 445788898877777 569999999999995
No 324
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=93.99 E-value=1.5 Score=33.13 Aligned_cols=106 Identities=14% Similarity=0.134 Sum_probs=54.5
Q ss_pred CCcEEEEecCC-------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC-----CeEEEEEccC
Q 023672 137 TSCVFASTTRD-------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN-----KSVRVFDVHR 203 (279)
Q Consensus 137 ~~~~l~s~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d-----~~i~~~d~~~ 203 (279)
++.+++.|+.+ ..+.+||+.+.+-...-...... .-.++... ++++++.| .+ ..+.+||+.+
T Consensus 155 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~ 229 (302)
T 2xn4_A 155 GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRR----SGAGVGVL-NNLLYAVGGHDGPLVRKSVEVYDPTT 229 (302)
T ss_dssp TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCC----BSCEEEEE-TTEEEEECCBSSSSBCCCEEEEETTT
T ss_pred CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCcccc----ccccEEEE-CCEEEEECCCCCCcccceEEEEeCCC
Confidence 45566666532 35889999887644332221111 11122222 45555544 43 4688999986
Q ss_pred CCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC-----cEEEEecCCCe
Q 023672 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-----TSAIYREDNME 256 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg-----~i~~wd~~~~~ 256 (279)
. ....+..+... ......+. . ++.+++.|+.++ .+.+||+.+.+
T Consensus 230 ~--~W~~~~~~~~~----r~~~~~~~--~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 278 (302)
T 2xn4_A 230 N--AWRQVADMNMC----RRNAGVCA--V-NGLLYVVGGDDGSCNLASVEYYNPTTDK 278 (302)
T ss_dssp T--EEEEECCCSSC----CBSCEEEE--E-TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred C--CEeeCCCCCCc----cccCeEEE--E-CCEEEEECCcCCCcccccEEEEcCCCCe
Confidence 3 22222222111 11112222 2 567888887654 48999988765
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.36 E-value=2 Score=32.51 Aligned_cols=106 Identities=11% Similarity=0.135 Sum_probs=54.1
Q ss_pred CCcEEEEecCC------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE-ec---------CCeEEEEE
Q 023672 137 TSCVFASTTRD------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GY---------NKSVRVFD 200 (279)
Q Consensus 137 ~~~~l~s~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~---------d~~i~~~d 200 (279)
++.+++.|+.+ ..+.+||+.+.+-...-...... .-.+++.. ++++++. |. -..+.+||
T Consensus 101 ~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~~~yd 175 (306)
T 3ii7_A 101 EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQR----CSHGMVEA-NGLIYVCGGSLGNNVSGRVLNSCEVYD 175 (306)
T ss_dssp TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCC----BSCEEEEE-TTEEEEECCEESCTTTCEECCCEEEEE
T ss_pred CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCc----ceeEEEEE-CCEEEEECCCCCCCCcccccceEEEeC
Confidence 45566777654 45889999887644332222111 11122222 4555553 32 34588999
Q ss_pred ccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC-----CcEEEEecCCCe
Q 023672 201 VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNME 256 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-----g~i~~wd~~~~~ 256 (279)
+.+. ....+..+... ......+.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 176 ~~~~--~W~~~~~~p~~----r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~ 227 (306)
T 3ii7_A 176 PATE--TWTELCPMIEA----RKNHGLVFV---KDKIFAVGGQNGLGGLDNVEYYDIKLNE 227 (306)
T ss_dssp TTTT--EEEEECCCSSC----CBSCEEEEE---TTEEEEECCEETTEEBCCEEEEETTTTE
T ss_pred CCCC--eEEECCCccch----hhcceEEEE---CCEEEEEeCCCCCCCCceEEEeeCCCCc
Confidence 9873 22222222111 111122222 55677777654 358889987653
No 326
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=92.74 E-value=2.4 Score=31.89 Aligned_cols=106 Identities=12% Similarity=0.215 Sum_probs=55.0
Q ss_pred CCcEEEEecCC-----CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE-ecC-----CeEEEEEccCCC
Q 023672 137 TSCVFASTTRD-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN-----KSVRVFDVHRPG 205 (279)
Q Consensus 137 ~~~~l~s~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d-----~~i~~~d~~~~~ 205 (279)
++.+++.|+.+ ..+.+||+.+.+-...-...... .-.++... ++++++. |.+ ..+.+||+.+.
T Consensus 112 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~d~~~~- 185 (301)
T 2vpj_A 112 GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAR----EGAGLVVA-SGVIYCLGGYDGLNILNSVEKYDPHTG- 185 (301)
T ss_dssp TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCC----BSCEEEEE-TTEEEEECCBCSSCBCCCEEEEETTTT-
T ss_pred CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCc----ccceEEEE-CCEEEEECCCCCCcccceEEEEeCCCC-
Confidence 45566666543 35889999887644332222211 11122222 4555554 343 56889998863
Q ss_pred CceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC-----CcEEEEecCCCe
Q 023672 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNME 256 (279)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-----g~i~~wd~~~~~ 256 (279)
.......+... ......+.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 186 -~W~~~~~~p~~----r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 233 (301)
T 2vpj_A 186 -HWTNVTPMATK----RSGAGVALL---NDHIYVVGGFDGTAHLSSVEAYNIRTDS 233 (301)
T ss_dssp -EEEEECCCSSC----CBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred -cEEeCCCCCcc----cccceEEEE---CCEEEEEeCCCCCcccceEEEEeCCCCc
Confidence 22222222111 111222222 56788888764 358899987764
No 327
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=92.72 E-value=4.6 Score=35.12 Aligned_cols=182 Identities=6% Similarity=0.010 Sum_probs=94.0
Q ss_pred CCceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCc
Q 023672 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSC 139 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 139 (279)
...|.++....++ .|..|+.+| +..||..+...... . ......|..+.. .++
T Consensus 62 ~~~i~~i~~d~~g-~lWigT~~G-l~~yd~~~~~f~~~----~-------------~~~~~~i~~i~~--------~~g- 113 (758)
T 3ott_A 62 NTRIYCGVIIDNT-YLYMGTDNG-ILVYNYRADRYEQP----E-------------TDFPTDVRTMAL--------QGD- 113 (758)
T ss_dssp SSCEEEEEEETTT-EEEEEETTE-EEEEETTTTEECCC----S-------------CCCCSCEEEEEE--------ETT-
T ss_pred CceEEEEEEcCCC-cEEEEeCCC-eEEEeCCCCEEECc----c-------------cCCCceEEEEEe--------cCC-
Confidence 3568888877776 455666666 77899876533210 0 000123443321 134
Q ss_pred EEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccccC
Q 023672 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE 219 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~ 219 (279)
.|..++.+ -|..+|..+++.. .+...........|.++...+++.+.++.. +.+..+|..+. .+... .......
T Consensus 114 ~lWigt~~-Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~-~Gl~~~~~~~~--~~~~~-~~~~~~~ 187 (758)
T 3ott_A 114 TLWLGALN-GLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGTY-NGLCRYIPSNG--KFEGI-PLPVHSS 187 (758)
T ss_dssp EEEEEETT-EEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEET-TEEEEEETTTT--EEEEE-CCCCCTT
T ss_pred cEEEEcCC-cceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEeC-CCHhhCccCCC--ceEEe-cCCCccc
Confidence 34445555 5778898766543 221110000112578888888888777544 45777887652 11111 1110000
Q ss_pred CCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEccCC
Q 023672 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKLSSA 277 (279)
Q Consensus 220 ~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~spdg 277 (279)
.....|.++...+ ++..|..|+. +-+..+|..+++...........|.++...++|
T Consensus 188 ~~~~~i~~i~~d~-~~~~lWigt~-~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g 243 (758)
T 3ott_A 188 QSNLFVNSLLEDT-TRQCVWIGTE-GYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNG 243 (758)
T ss_dssp CSSCCEEEEEEET-TTTEEEEEEE-EEEEEEETTTTEEEEEEEEEEEEEEEEEECTTC
T ss_pred cccceeEEEEEEC-CCCEEEEEEC-CCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCC
Confidence 1123478888877 5554444544 347888887765322111112346666655554
No 328
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=92.42 E-value=6.6 Score=36.18 Aligned_cols=116 Identities=13% Similarity=0.192 Sum_probs=69.0
Q ss_pred ccCCCCcEEEEecCC---------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccC
Q 023672 133 ASDPTSCVFASTTRD---------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHR 203 (279)
Q Consensus 133 ~~~~~~~~l~s~~~d---------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~ 203 (279)
.|..+...|+++... ..|++.+...+..+..+..... ..|...+.+. ..++.+.++.+.++.+..
T Consensus 468 gf~~~~~TL~~~~l~~~~ivQVt~~~Irli~~~~~~~~~~w~~p~~----~~I~~As~n~--~~vvva~g~~l~~fel~~ 541 (1158)
T 3ei3_A 468 GFVDDQQTFFCGNVAHQQLIQITSASVRLVSQEPKALVSEWKEPQA----KNISVASCNS--SQVVVAVGRALYYLQIHP 541 (1158)
T ss_dssp TCCSSSCEEEEEEETTTEEEEEESSCEEEEESSSCCEEEEECCTTC----CCCCEEEECS--SEEEEEETTEEEEEEEET
T ss_pred cccCCCCcEEEEEcCCCeEEEEecCEEEEEECCCCeEEEEEECCCC----CEEEEEEeCC--CEEEEEECCEEEEEEeeC
Confidence 345555666666431 2466666655445555543321 1455555553 355533567888888875
Q ss_pred CCCceeeeeecccccCCCCCceEEEEEccCC-----CcEEEEEeC-CCcEEEEecCCCeEEEEE
Q 023672 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTH-----TGMLAIGSY-SQTSAIYREDNMELLYVL 261 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~-----~~~l~~~~~-dg~i~~wd~~~~~~~~~~ 261 (279)
+ .+...... .-...|.|+++.|.. +.+++.|.. |++|+|+++.+.+.+...
T Consensus 542 ~--~L~~~~~~-----~l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~ 598 (1158)
T 3ei3_A 542 Q--ELRQISHT-----EMEHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKE 598 (1158)
T ss_dssp T--EEEEEEEE-----ECSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred C--ceeeeccc-----CCCCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEE
Confidence 2 12222221 124579999998622 468999996 999999999887766443
No 329
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=92.39 E-value=6 Score=37.24 Aligned_cols=36 Identities=11% Similarity=0.137 Sum_probs=27.0
Q ss_pred ceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEE
Q 023672 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYV 260 (279)
Q Consensus 224 ~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~ 260 (279)
...++..++ .-.++..-+.-|.|++||+.|+.++..
T Consensus 260 fpv~~~vs~-k~g~iy~itk~G~~~~~d~~t~~~i~~ 295 (1630)
T 1xi4_A 260 FPVAMQISE-KHDVVFLITKYGYIHLYDLETGTCIYM 295 (1630)
T ss_pred cceEEEecc-ccCEEEEEecCceEEEEecccchhhhh
Confidence 344666777 556777778889999999999876543
No 330
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.98 E-value=2.9 Score=34.08 Aligned_cols=113 Identities=12% Similarity=0.123 Sum_probs=58.1
Q ss_pred CcccccCCCCc-EEEEecCCCcEEEEECCCCe---eeEEEeccCcc----ccccceeeEEECCC----CCEEEE-e--cC
Q 023672 129 PHMSASDPTSC-VFASTTRDHPIHLWDATTGL---LRCTYRAYDAV----DEITAAFSVAFNPT----GTKIFA-G--YN 193 (279)
Q Consensus 129 ~~~~~~~~~~~-~l~s~~~d~~i~i~d~~~~~---~~~~~~~~~~~----~~~~~v~~~~~~~~----~~~l~~-~--~d 193 (279)
|..+++.|++. .|+++...|.|++++..... .+..+...-.. ........|+|+|+ +.+.++ + .+
T Consensus 16 P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~~~ 95 (463)
T 2wg3_C 16 PVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTNQE 95 (463)
T ss_dssp EEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEECCC
T ss_pred ceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCCCC
Confidence 44456788885 45556678999999754321 12222110000 01235678999997 333332 2 12
Q ss_pred ----------CeEEEEEccCC--C----CceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC
Q 023672 194 ----------KSVRVFDVHRP--G----RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS 244 (279)
Q Consensus 194 ----------~~i~~~d~~~~--~----~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d 244 (279)
..|.-|.+... . ...+.+..+......| ....|+|.| ++.++++.+..
T Consensus 96 ~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H--~g~~l~fgp-DG~LYv~~Gd~ 159 (463)
T 2wg3_C 96 RWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKH--LGGQLLFGP-DGFLYIILGDG 159 (463)
T ss_dssp SSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSS--CEEEEEECT-TSCEEEEECCT
T ss_pred CcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcc--cCCcEeECC-CCcEEEEeCCC
Confidence 14444666431 1 0122222332222344 367899999 78777766543
No 331
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=91.96 E-value=4.3 Score=33.04 Aligned_cols=103 Identities=9% Similarity=0.071 Sum_probs=57.3
Q ss_pred ceeeEEECCCCC--EEEEecCCeEEEEEccCCCCceeeeeecccccC-----CCCCceEEEEEccC---CCcEEEEEeCC
Q 023672 175 AAFSVAFNPTGT--KIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKE-----GQAGIMSAIAFSPT---HTGMLAIGSYS 244 (279)
Q Consensus 175 ~v~~~~~~~~~~--~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~-----~~~~~v~~~~~sp~---~~~~l~~~~~d 244 (279)
..+.|+|.|++. ++++-..|.|++++... ......+..+..... ........|+|+|+ ++.+.++-+.+
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g-~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEG-EIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTS-CBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCC-CeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 557899999985 66666889999997542 111111111211111 12456789999993 25555543321
Q ss_pred ------------CcEEEEecCC----------CeEEEEEe--ecCCCEEEEEEccCCC
Q 023672 245 ------------QTSAIYREDN----------MELLYVLH--GQEGGVTHVSKLSSAY 278 (279)
Q Consensus 245 ------------g~i~~wd~~~----------~~~~~~~~--~~~~~v~~~~~spdg~ 278 (279)
..|.-|.+.. .+.+..+. .....-..|+|.|||+
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~ 151 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF 151 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc
Confidence 1343355432 23344443 1223568899999995
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=91.74 E-value=3.4 Score=31.37 Aligned_cols=107 Identities=15% Similarity=0.273 Sum_probs=53.6
Q ss_pred CCcEEEEecC-C-----CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-EecCC-----eEEEEEccCC
Q 023672 137 TSCVFASTTR-D-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNK-----SVRVFDVHRP 204 (279)
Q Consensus 137 ~~~~l~s~~~-d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~d~-----~i~~~d~~~~ 204 (279)
++.+++.|+. + ..+.+||+.+.+-...-...... .-.++... ++++++ .|.++ .+.+||+.+.
T Consensus 148 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 148 MDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTAR----SLFGATVH-DGRIIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp TTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCC----BSCEEEEE-TTEEEEEEEECSSSEEEEEEEEETTTT
T ss_pred CCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCch----hceEEEEE-CCEEEEEeccCCCCccceEEEEECCCC
Confidence 4556666665 2 36889999887543322111111 11122222 445555 44432 5888898763
Q ss_pred CCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC--------------cEEEEecCCCeE
Q 023672 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ--------------TSAIYREDNMEL 257 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg--------------~i~~wd~~~~~~ 257 (279)
....+...... ......+.+ ++.+++.|+.++ .+.+||+.+.+-
T Consensus 223 --~W~~~~~~p~~----r~~~~~~~~---~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W 280 (315)
T 4asc_A 223 --KWAPFEAFPQE----RSSLSLVSL---VGTLYAIGGFATLETESGELVPTELNDIWRYNEEEKKW 280 (315)
T ss_dssp --EEEEECCCSSC----CBSCEEEEE---TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTTTEE
T ss_pred --eEEECCCCCCc----ccceeEEEE---CCEEEEECCccccCcCCccccccccCcEEEecCCCChh
Confidence 22222222111 111222222 557777777542 377889877653
No 333
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=91.73 E-value=4.8 Score=36.19 Aligned_cols=69 Identities=13% Similarity=0.054 Sum_probs=41.7
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCC-CCEEEE--e--cCCeEEEEEccC
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-GTKIFA--G--YNKSVRVFDVHR 203 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~--~--~d~~i~~~d~~~ 203 (279)
.++..++++-+.|+++|+|++.+++++.+...................|. +.++.+ . .+|..++|.+..
T Consensus 244 ~~~~~~lftl~~D~~LRiWsl~t~~~v~t~dL~~~~~~~~~~~~~~~~~~~~~~i~v~~s~~~~g~F~~~~~~~ 317 (950)
T 4gq2_M 244 LSTYNVLVMLSLDYKLKVLDLSTNQCVETIELSQTILPLQSFPYLTSDHTTNSFIALYYPDNSHGSFSIYKLNA 317 (950)
T ss_dssp ETTTTEEEEEETTCEEEEEETTTTEEEEEEECCCCCCCSCCCCCEEECSSSTTEEEEEECCSSSCEEEEEEEEE
T ss_pred cCCCcEEEEEECCCEEEEEECCCCCeEeeecccccCCccccccccccCCCcccEEEEEEcCCCCcEEEEEEEec
Confidence 45667899999999999999999999888654332211111122233332 233321 2 456777776643
No 334
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.47 E-value=3.6 Score=31.13 Aligned_cols=106 Identities=10% Similarity=0.169 Sum_probs=53.7
Q ss_pred CCcEEEEecCC-----CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE-ecC-----CeEEEEEccCCC
Q 023672 137 TSCVFASTTRD-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN-----KSVRVFDVHRPG 205 (279)
Q Consensus 137 ~~~~l~s~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d-----~~i~~~d~~~~~ 205 (279)
++.+++.|+.+ ..+.+||+.+.+-...-....... .. +++.. ++++++. |.+ ..+.+||+.+.
T Consensus 121 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~---~~-~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~- 194 (308)
T 1zgk_A 121 DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRI---GV-GVAVL-NRLLYAVGGFDGTNRLNSAECYYPERN- 194 (308)
T ss_dssp TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCB---SC-EEEEE-TTEEEEECCBCSSCBCCCEEEEETTTT-
T ss_pred CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcccc---ce-EEEEE-CCEEEEEeCCCCCCcCceEEEEeCCCC-
Confidence 45566666543 358889998775433222111110 11 22222 4555554 333 46889998763
Q ss_pred CceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC-----CcEEEEecCCCe
Q 023672 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNME 256 (279)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-----g~i~~wd~~~~~ 256 (279)
.......+... ......+.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 195 -~W~~~~~~p~~----r~~~~~~~~---~~~iyv~GG~~~~~~~~~v~~yd~~~~~ 242 (308)
T 1zgk_A 195 -EWRMITAMNTI----RSGAGVCVL---HNCIYAAGGYDGQDQLNSVERYDVETET 242 (308)
T ss_dssp -EEEECCCCSSC----CBSCEEEEE---TTEEEEECCBCSSSBCCCEEEEETTTTE
T ss_pred -eEeeCCCCCCc----cccceEEEE---CCEEEEEeCCCCCCccceEEEEeCCCCc
Confidence 22222222111 111222232 56788888765 458899987654
No 335
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.39 E-value=3.7 Score=31.07 Aligned_cols=107 Identities=15% Similarity=0.204 Sum_probs=54.6
Q ss_pred CCcEEEEecCC-----CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC-----CeEEEEEccCCC
Q 023672 137 TSCVFASTTRD-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN-----KSVRVFDVHRPG 205 (279)
Q Consensus 137 ~~~~l~s~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d-----~~i~~~d~~~~~ 205 (279)
++.+++.|+.+ ..+.+||+.+.+-...-...... .-.++... ++++++.| .+ ..+.+||+.+.
T Consensus 168 ~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~-~~~iyv~GG~~~~~~~~~v~~yd~~~~- 241 (308)
T 1zgk_A 168 NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTIR----SGAGVCVL-HNCIYAAGGYDGQDQLNSVERYDVETE- 241 (308)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSCC----BSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT-
T ss_pred CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCcc----ccceEEEE-CCEEEEEeCCCCCCccceEEEEeCCCC-
Confidence 45566666544 45889999877543321111110 11122222 45555544 43 56899999863
Q ss_pred CceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC-----cEEEEecCCCeE
Q 023672 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-----TSAIYREDNMEL 257 (279)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg-----~i~~wd~~~~~~ 257 (279)
....+..+. ........+. - ++.+++.|+.++ .+.+||+.+.+-
T Consensus 242 -~W~~~~~~p----~~r~~~~~~~--~-~~~i~v~GG~~~~~~~~~v~~yd~~~~~W 290 (308)
T 1zgk_A 242 -TWTFVAPMK----HRRSALGITV--H-QGRIYVLGGYDGHTFLDSVECYDPDTDTW 290 (308)
T ss_dssp -EEEECCCCS----SCCBSCEEEE--E-TTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred -cEEECCCCC----CCccceEEEE--E-CCEEEEEcCcCCCcccceEEEEcCCCCEE
Confidence 222222221 1111122222 2 567888887543 478899877653
No 336
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=90.82 E-value=4.1 Score=30.60 Aligned_cols=106 Identities=13% Similarity=0.230 Sum_probs=55.2
Q ss_pred CCcEEEEecCC-----CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-cC-----CeEEEEEccCCC
Q 023672 137 TSCVFASTTRD-----HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YN-----KSVRVFDVHRPG 205 (279)
Q Consensus 137 ~~~~l~s~~~d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d-----~~i~~~d~~~~~ 205 (279)
++.+++.|+.+ ..+.+||+.+.+-...-...... .-.++... ++++++.| .+ ..+.+||+.+.
T Consensus 159 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~-~~~i~v~GG~~~~~~~~~v~~yd~~~~- 232 (301)
T 2vpj_A 159 SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATKR----SGAGVALL-NDHIYVVGGFDGTAHLSSVEAYNIRTD- 232 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSCC----BSCEEEEE-TTEEEEECCBCSSSBCCCEEEEETTTT-
T ss_pred CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCccc----ccceEEEE-CCEEEEEeCCCCCcccceEEEEeCCCC-
Confidence 45566666654 45889999887654332221111 11122222 44555544 43 56899999863
Q ss_pred CceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC-----CcEEEEecCCCe
Q 023672 206 RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNME 256 (279)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-----g~i~~wd~~~~~ 256 (279)
....+..+... ......+.+ ++.+++.|+.+ ..+.+||+.+.+
T Consensus 233 -~W~~~~~~p~~----r~~~~~~~~---~~~i~v~GG~~~~~~~~~v~~yd~~~~~ 280 (301)
T 2vpj_A 233 -SWTTVTSMTTP----RCYVGATVL---RGRLYAIAGYDGNSLLSSIECYDPIIDS 280 (301)
T ss_dssp -EEEEECCCSSC----CBSCEEEEE---TTEEEEECCBCSSSBEEEEEEEETTTTE
T ss_pred -cEEECCCCCCc----ccceeEEEE---CCEEEEEcCcCCCcccccEEEEcCCCCe
Confidence 22222222111 111222222 56788888765 357899987654
No 337
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=90.69 E-value=4.8 Score=31.17 Aligned_cols=117 Identities=9% Similarity=0.075 Sum_probs=75.2
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeec
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
+|..+.+|.-. ..++.++|+++.+.++...... .|.-=.|-.+ +.|+--.+..|+-|++.....+.+.. ..
T Consensus 75 nP~~~ViALra-g~~LQiFnletK~klks~~~~e------~VvfWkWis~-~~L~lVT~taVyHWs~~~~s~P~kvF-dR 145 (365)
T 2xzh_A 75 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD------DVTFWKWISL-NTVALVTDNAVYHWSMEGESQPVKMF-DR 145 (365)
T ss_dssp CSSSSEEEEEE-TTEEEEEETTTTEEEEEEECSS------CEEEEEECSS-SEEEEEESSEEEEEESSTTCCCEEEE-EC
T ss_pred CCCccEEEEec-CCeEEEechHHhhhhcceecCC------ccEEEEecCC-CeEEEEcCCcEEEEcccCCCCCceee-ec
Confidence 66777777665 6789999999999888888766 4544555443 34444467789999998644444333 22
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEe-------CCCcEEEEecCCCeEEEEEeec
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGS-------YSQTSAIYREDNMELLYVLHGQ 264 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~-------~dg~i~~wd~~~~~~~~~~~~~ 264 (279)
...+. ...|..-..++ +..+++..+ -.|.+.+|..+.+. .+.+.+|
T Consensus 146 ~~~L~--~~QIInY~~d~-~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGh 198 (365)
T 2xzh_A 146 HSSLA--GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGH 198 (365)
T ss_dssp CGGGT--TCEEEEEEECT-TSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCS
T ss_pred chhcc--cceEEEEEECC-CCCEEEEEeEeccCCccceeEEEEeecccc-cceeeee
Confidence 22222 35677888888 677665443 24678899876543 3344444
No 338
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=90.39 E-value=0.97 Score=35.06 Aligned_cols=110 Identities=10% Similarity=0.127 Sum_probs=58.6
Q ss_pred CeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcEEEEe-cCCCcEE
Q 023672 73 SSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCVFAST-TRDHPIH 151 (279)
Q Consensus 73 ~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~l~s~-~~d~~i~ 151 (279)
..++.++.||.|.-+|..+|+......... ..++.... .| +...++..++.. +.||.|.
T Consensus 11 ~~V~v~t~dG~l~Ald~~tG~~~W~~~~~~----------------~~p~~~~~-~~---~~~~~~~~~vv~p~~dG~l~ 70 (339)
T 2be1_A 11 DILIAADVEGGLHAVDRRNGHIIWSIEPEN----------------FQPLIEIQ-EP---SRLETYETLIIEPFGDGNIY 70 (339)
T ss_dssp EEEEEEETTSCEEEEETTTTEEEEEECGGG----------------SCCSEECC-CS---CTTTSSEEEEECCSTTTEEE
T ss_pred CEEEEEeCCCeEEEEECCCCcEEEEecCCc----------------cCCcEEec-CC---ccccCCcEEEEEECCCCEEE
Confidence 367889999999999998886644322110 00111110 00 001133344443 6899999
Q ss_pred EEECCCCeeeEEEeccCccccccceee---EEE------CCCCCEEEE-ecCCeEEEEEccCC
Q 023672 152 LWDATTGLLRCTYRAYDAVDEITAAFS---VAF------NPTGTKIFA-GYNKSVRVFDVHRP 204 (279)
Q Consensus 152 i~d~~~~~~~~~~~~~~~~~~~~~v~~---~~~------~~~~~~l~~-~~d~~i~~~d~~~~ 204 (279)
.++..+|.....+....... ..++.. ..+ +.+ ..+++ +.++.+...|++++
T Consensus 71 a~~~~~G~~~~~~~~~~lv~-~SP~~~~~~pvv~~~~~~~~~-g~Vy~Gs~~g~l~ald~~tG 131 (339)
T 2be1_A 71 YFNAHQGLQKLPLSIRQLVS-TSPLHLKTNIVVNDSGKIVED-EKVYTGSMRTIMYTINMLNG 131 (339)
T ss_dssp EEETTTEEEEEEEEHHHHHT-TCSEEEECC----------CC-EEEEECEEEEEEEEEETTTC
T ss_pred EEECCCCcEEeeecccccee-ccccccCCCceeecccccccC-CEEEEEecCCEEEEEECCCC
Confidence 99999886665554432110 001110 001 123 34444 48888888888874
No 339
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=89.92 E-value=6.1 Score=31.19 Aligned_cols=197 Identities=10% Similarity=0.077 Sum_probs=95.6
Q ss_pred eeeEecCCCC--cccceeeeeeccCCCCCceEEEEEc---cC----CCeEE-EeeCCCeEEEEeCCCCcccccccccccc
Q 023672 35 PLIRFDVPPH--RTYHFYNQFRTSSIPNNFLKGIKWS---PD----GSSFL-TSSEDKTLRIFSLPENGISYDVNACSLA 104 (279)
Q Consensus 35 ~~~~~d~~~~--~~~~~~~~~~~~~~h~~~v~~~~~~---~~----~~~l~-t~~~dg~i~iwd~~~~~~~~~~~~~~~~ 104 (279)
.+..||+.+. +.++.+............+..+++. |+ +.+.. +=+..+-|.|+|+.+++.-...... +.
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~-~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPT-FK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGG-GS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCC-Cc
Confidence 4678999998 8877665433333345678999988 22 22333 3334678999999988654332211 11
Q ss_pred CCCCcccceeeecCCCceEEEEeeCcccccCCC----CcEEEEecCCCcEEEEECC-----CCeeeEEEeccCccccccc
Q 023672 105 KDQDSYEASLVVTEGESVYDFCWFPHMSASDPT----SCVFASTTRDHPIHLWDAT-----TGLLRCTYRAYDAVDEITA 175 (279)
Q Consensus 105 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~----~~~l~s~~~d~~i~i~d~~-----~~~~~~~~~~~~~~~~~~~ 175 (279)
+. .. ....-.+..+ .+.-....++++|+ ++.|+.....+. ++|-+. +......++..+..+....
T Consensus 203 pd-~~---~~~~i~G~~~-~~~~Gi~gIaLsp~~~~~~~~LYf~plss~-~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~ 276 (381)
T 3q6k_A 203 AE-RP---TKFDYGGKEY-EFKAGIFGITLGDRDSEGNRPAYYLAGSAI-KVYSVNTKELKQKGGKLNPELLGNRGKYND 276 (381)
T ss_dssp CC-SC---EEEEETTEEE-EECCCEEEEEECCCCTTSCCEEEEEESSCS-EEEEEEHHHHSSTTCCCCCEEEEECCTTCC
T ss_pred cc-cC---cceEECCEEe-EeccCceEEEecCCcCCCCeEEEEEECCCC-cEEEEEHHHhhCcchhhceEEeeecCCCCC
Confidence 10 00 0111111111 11111122345665 666666654442 233332 2111111111111111112
Q ss_pred eeeEEEC-CCCCEEEEe-cCCeEEEEEccC-CCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEe
Q 023672 176 AFSVAFN-PTGTKIFAG-YNKSVRVFDVHR-PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGS 242 (279)
Q Consensus 176 v~~~~~~-~~~~~l~~~-~d~~i~~~d~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~ 242 (279)
...+++. .+|.++++- ....|..|+..+ +-.+ .....+.. ...-..+..+.+.+ ++.+.+..+
T Consensus 277 ~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~-~n~~~l~~--d~~l~~pd~~~i~~-~g~Lwv~sn 342 (381)
T 3q6k_A 277 AIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRM-KNTDVVYT--SSRFVFGTDISVDS-KGGLWFMSN 342 (381)
T ss_dssp EEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCG-GGEEEEEE--CTTCCSEEEEEECT-TSCEEEEEC
T ss_pred cceEEEeCCCCeEEEEeccCCeEEEEeCCCCcccc-CceEEEEE--CCCccccCeEEECC-CCeEEEEEC
Confidence 3356776 567666665 889999999875 2110 11111111 11233577788877 666666554
No 340
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=89.71 E-value=0.88 Score=37.83 Aligned_cols=74 Identities=11% Similarity=0.064 Sum_probs=49.9
Q ss_pred eCcccccCCCCcEEEEec-CCCcEEEEECCCC------ee---eEEEeccCccccccceeeEEECCCCCEEEEe-cCCeE
Q 023672 128 FPHMSASDPTSCVFASTT-RDHPIHLWDATTG------LL---RCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-YNKSV 196 (279)
Q Consensus 128 ~~~~~~~~~~~~~l~s~~-~d~~i~i~d~~~~------~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i 196 (279)
+|+.+.++|||++++.++ .+.++.++|++.- +. ...+..... ........+|.++|....+- -|..|
T Consensus 324 sPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e--~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 324 NPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE--LGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB--CCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeecc--CCCcccEEEECCCCceEeeeeecceE
Confidence 677888999999987765 4778999999742 11 001111111 11256789999999433355 89999
Q ss_pred EEEEccC
Q 023672 197 RVFDVHR 203 (279)
Q Consensus 197 ~~~d~~~ 203 (279)
..|++..
T Consensus 402 vkWni~~ 408 (638)
T 3sbq_A 402 VKWNMEE 408 (638)
T ss_dssp EEEEHHH
T ss_pred EEEeccH
Confidence 9999975
No 341
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=89.68 E-value=5.3 Score=30.09 Aligned_cols=113 Identities=10% Similarity=0.141 Sum_probs=57.7
Q ss_pred CCcEEEEecC---------CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE-ecC-----CeEEEEEc
Q 023672 137 TSCVFASTTR---------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYN-----KSVRVFDV 201 (279)
Q Consensus 137 ~~~~l~s~~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d-----~~i~~~d~ 201 (279)
++.+++.|+. -..+.+||+.+.+-...-...... .-.++... ++++++. |.+ ..+.+||+
T Consensus 149 ~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~-~~~i~v~GG~~~~~~~~~~~~yd~ 223 (306)
T 3ii7_A 149 NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEAR----KNHGLVFV-KDKIFAVGGQNGLGGLDNVEYYDI 223 (306)
T ss_dssp TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCC----BSCEEEEE-TTEEEEECCEETTEEBCCEEEEET
T ss_pred CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchh----hcceEEEE-CCEEEEEeCCCCCCCCceEEEeeC
Confidence 4555666643 345889999887644332222111 11122222 4555554 332 46889999
Q ss_pred cCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC-----CcEEEEecCCCe--EEEEEee
Q 023672 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS-----QTSAIYREDNME--LLYVLHG 263 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d-----g~i~~wd~~~~~--~~~~~~~ 263 (279)
.+. ....+..+. .......++.+ ++.+++.|+.+ ..+.+||+.+.+ .+..+..
T Consensus 224 ~~~--~W~~~~~~p----~~r~~~~~~~~---~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~ 283 (306)
T 3ii7_A 224 KLN--EWKMVSPMP----WKGVTVKCAAV---GSIVYVLAGFQGVGRLGHILEYNTETDKWVANSKVRA 283 (306)
T ss_dssp TTT--EEEECCCCS----CCBSCCEEEEE---TTEEEEEECBCSSSBCCEEEEEETTTTEEEEEEEEEC
T ss_pred CCC--cEEECCCCC----CCccceeEEEE---CCEEEEEeCcCCCeeeeeEEEEcCCCCeEEeCCCccc
Confidence 863 222222221 11112223333 56788888754 458899998754 4444443
No 342
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=88.97 E-value=14 Score=34.05 Aligned_cols=38 Identities=8% Similarity=0.091 Sum_probs=32.0
Q ss_pred ceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe
Q 023672 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (279)
Q Consensus 224 ~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 262 (279)
.+.+++..+ +..++++-+.|+++|+|++.+++++.+..
T Consensus 239 ~~vs~~~~~-~~~~lftL~~D~~LRiWsl~t~~~v~t~D 276 (1139)
T 4fhn_B 239 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 276 (1139)
T ss_dssp CBSCCEEET-TTTEEEEEBTTCEEEEEETTTTEEEEEEE
T ss_pred eeEEeeccC-CccEEEEEeCCCEEEEEECCCCCeEEeec
Confidence 455666777 77899999999999999999999988765
No 343
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=88.79 E-value=6.1 Score=29.66 Aligned_cols=106 Identities=10% Similarity=0.187 Sum_probs=53.9
Q ss_pred CCcEEEEecCCC-----cEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE-ec-------CCeEEEEEccC
Q 023672 137 TSCVFASTTRDH-----PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GY-------NKSVRVFDVHR 203 (279)
Q Consensus 137 ~~~~l~s~~~d~-----~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~-------d~~i~~~d~~~ 203 (279)
++.+++.|+.++ .+.+||+.+.+-...-...... .-.+++.. ++++++. |. -..+.+||+.+
T Consensus 108 ~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~~~yd~~~ 182 (302)
T 2xn4_A 108 NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRR----SSVGVGVV-GGLLYAVGGYDVASRQCLSTVECYNATT 182 (302)
T ss_dssp TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCC----BSCEEEEE-TTEEEEECCEETTTTEECCCEEEEETTT
T ss_pred CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcc----cCceEEEE-CCEEEEEeCCCCCCCccccEEEEEeCCC
Confidence 455666666543 4778998877644332222111 11122222 4455553 33 24588999886
Q ss_pred CCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC-----cEEEEecCCCe
Q 023672 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-----TSAIYREDNME 256 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg-----~i~~wd~~~~~ 256 (279)
. .......+...... ...+.+ ++.+++.|+.++ .+.+||+.+.+
T Consensus 183 ~--~W~~~~~~p~~r~~----~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 231 (302)
T 2xn4_A 183 N--EWTYIAEMSTRRSG----AGVGVL---NNLLYAVGGHDGPLVRKSVEVYDPTTNA 231 (302)
T ss_dssp T--EEEEECCCSSCCBS----CEEEEE---TTEEEEECCBSSSSBCCCEEEEETTTTE
T ss_pred C--cEEECCCCcccccc----ccEEEE---CCEEEEECCCCCCcccceEEEEeCCCCC
Confidence 3 22222222111111 122222 567888887653 58899987654
No 344
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=88.77 E-value=6.4 Score=29.86 Aligned_cols=108 Identities=16% Similarity=0.314 Sum_probs=54.4
Q ss_pred CCcEEEEecC------CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Eec-C----CeEEEEEccCC
Q 023672 137 TSCVFASTTR------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGY-N----KSVRVFDVHRP 204 (279)
Q Consensus 137 ~~~~l~s~~~------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~-d----~~i~~~d~~~~ 204 (279)
++.+++.|+. -..+.+||+.+.+-...-...... .-.+++.. ++++++ .|. + ..+.+||+.+.
T Consensus 158 ~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~~-~~~iyv~GG~~~~~~~~~~~~yd~~~~ 232 (318)
T 2woz_A 158 NGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPR----SMFGVAIH-KGKIVIAGGVTEDGLSASVEAFDLKTN 232 (318)
T ss_dssp TTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCC----BSCEEEEE-TTEEEEEEEEETTEEEEEEEEEETTTC
T ss_pred CCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCc----ccceEEEE-CCEEEEEcCcCCCCccceEEEEECCCC
Confidence 5556666653 235889999887644332221111 11122222 445555 443 2 35778898763
Q ss_pred CCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC--------------CcEEEEecCCCeEE
Q 023672 205 GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS--------------QTSAIYREDNMELL 258 (279)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d--------------g~i~~wd~~~~~~~ 258 (279)
....+..+... .... +++. - ++.+++.|+.+ ..+.+||+.+.+-.
T Consensus 233 --~W~~~~~~p~~----r~~~-~~~~-~-~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~~~W~ 291 (318)
T 2woz_A 233 --KWEVMTEFPQE----RSSI-SLVS-L-AGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDKKEWA 291 (318)
T ss_dssp --CEEECCCCSSC----CBSC-EEEE-E-TTEEEEECCBCCBC----CCBCCBCCCEEEEETTTTEEE
T ss_pred --eEEECCCCCCc----ccce-EEEE-E-CCEEEEECCeeccCCCCceeccceeeeEEEEeCCCCEeh
Confidence 22222222111 1111 2222 2 56788887754 35888998876543
No 345
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.99 E-value=12 Score=32.22 Aligned_cols=113 Identities=12% Similarity=0.185 Sum_probs=58.5
Q ss_pred CCcEEEEecCC------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE-ecCC--eEEEEEccCCCCc
Q 023672 137 TSCVFASTTRD------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GYNK--SVRVFDVHRPGRD 207 (279)
Q Consensus 137 ~~~~l~s~~~d------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~d~--~i~~~d~~~~~~~ 207 (279)
++.+++.|+.+ ..+.+||+.+.+-...-..... ..-.+++.-.++++++. |.++ .+.+||..+. .
T Consensus 451 ~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~~~~~p~~----R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~--~ 524 (695)
T 2zwa_A 451 NNQLLLIGGRKAPHQGLSDNWIFDMKTREWSMIKSLSHT----RFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEE--I 524 (695)
T ss_dssp TTEEEEECCBSSTTCBCCCCEEEETTTTEEEECCCCSBC----CBSCEEEECTTSCEEEECCBCSSCSEEEEETTTT--E
T ss_pred CCEEEEEcCCCCCCCccccEEEEeCCCCcEEECCCCCCC----cccceEEEEcCCEEEEECCCCCCCCEEEEECCCC--c
Confidence 56666776643 3578899988654332111111 11123333336666664 4332 7899999873 2
Q ss_pred eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeC--C-----CcEEEEecCCCe
Q 023672 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSY--S-----QTSAIYREDNME 256 (279)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~--d-----g~i~~wd~~~~~ 256 (279)
+...... ...........++.+...++.+++.|+. + ..+.+||+.+..
T Consensus 525 W~~~~~~-g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 525 FKDVTPK-DEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EEECCCS-SGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred eEEccCC-CCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 2222110 0001111222345666623778888876 2 348889987765
No 346
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=87.89 E-value=7.3 Score=29.48 Aligned_cols=106 Identities=8% Similarity=0.158 Sum_probs=53.3
Q ss_pred CCcEEEEecCC--------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe-c-C-----CeEEEEEc
Q 023672 137 TSCVFASTTRD--------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG-Y-N-----KSVRVFDV 201 (279)
Q Consensus 137 ~~~~l~s~~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~-d-----~~i~~~d~ 201 (279)
++.+++.|+.+ ..+.+||+.+.+-...-..+... .-.+++. -++++++.| . + ..+.+||+
T Consensus 98 ~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r----~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~ 172 (315)
T 4asc_A 98 LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVV----YGHTVLS-HMDLVYVIGGKGSDRKCLNKMCVYDP 172 (315)
T ss_dssp TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCC----BSCEEEE-ETTEEEEECCBCTTSCBCCCEEEEET
T ss_pred CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcc----cceeEEE-ECCEEEEEeCCCCCCcccceEEEEeC
Confidence 45566666632 35889999887543222211111 1112222 344555543 4 2 46899999
Q ss_pred cCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC-----cEEEEecCCCe
Q 023672 202 HRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-----TSAIYREDNME 256 (279)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg-----~i~~wd~~~~~ 256 (279)
.+. .......+... .....++.+ ++.+++.|+.++ .+.+||+.+.+
T Consensus 173 ~~~--~W~~~~~~p~~----r~~~~~~~~---~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 173 KKF--EWKELAPMQTA----RSLFGATVH---DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp TTT--EEEECCCCSSC----CBSCEEEEE---TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred CCC--eEEECCCCCCc----hhceEEEEE---CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 863 22222222111 111122222 567788777654 48889987653
No 347
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.32 E-value=16 Score=32.88 Aligned_cols=38 Identities=8% Similarity=0.091 Sum_probs=32.7
Q ss_pred ceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe
Q 023672 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (279)
Q Consensus 224 ~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 262 (279)
.+.+++..+ +..++++-+.|+++|+|++.+++++.+..
T Consensus 237 ~~~~~~~~~-~~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLS-TYNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEET-TTTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecC-CCcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 567777777 77899999999999999999999887754
No 348
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=87.26 E-value=2.2 Score=35.85 Aligned_cols=59 Identities=19% Similarity=0.222 Sum_probs=41.5
Q ss_pred eCcccccCCCCcEEEEecCC------------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE
Q 023672 128 FPHMSASDPTSCVFASTTRD------------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA 190 (279)
Q Consensus 128 ~~~~~~~~~~~~~l~s~~~d------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 190 (279)
+|+.++|++.|.+++.-..+ ..+.+.+..+++....+..+.. ..++.++|+||++.|++
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~g----aE~TG~~fspDg~tlfv 547 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG----CEVTGISFSPDQKTLFV 547 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTT----CEEEEEEECTTSSEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCC----ccCcCeeECCCCCEEEE
Confidence 46667889999876654432 2355667777877766665432 37899999999988874
No 349
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=86.99 E-value=2 Score=36.19 Aligned_cols=55 Identities=13% Similarity=0.030 Sum_probs=39.4
Q ss_pred ceEEEEEccCCCcEEEEEeCC------------CcEEEEecCCCeEEEEEeecC-CCEEEEEEccCCCC
Q 023672 224 IMSAIAFSPTHTGMLAIGSYS------------QTSAIYREDNMELLYVLHGQE-GGVTHVSKLSSAYT 279 (279)
Q Consensus 224 ~v~~~~~sp~~~~~l~~~~~d------------g~i~~wd~~~~~~~~~~~~~~-~~v~~~~~spdg~~ 279 (279)
..-.|+|+| .|.+++.-..+ ..+.+.+..+++....+.++. ..+++++|+|||++
T Consensus 477 ~PDNL~fd~-~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~rf~~~P~gaE~TG~~fspDg~t 544 (592)
T 3zwu_A 477 SPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKT 544 (592)
T ss_dssp CEEEEEECT-TCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSE
T ss_pred CCcceEECC-CCCEEEEecCCCcccccccccccceEEEEeCCCCeEEEEEeCCCCccCcCeeECCCCCE
Confidence 346789999 77766654322 236667777888777777654 57999999999974
No 350
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=82.05 E-value=6.4 Score=32.94 Aligned_cols=56 Identities=13% Similarity=0.045 Sum_probs=39.3
Q ss_pred CceEEEEEccCCCcEEEEEeC------------CCcEEEEecCCCeEEEEEeec-CCCEEEEEEccCCCC
Q 023672 223 GIMSAIAFSPTHTGMLAIGSY------------SQTSAIYREDNMELLYVLHGQ-EGGVTHVSKLSSAYT 279 (279)
Q Consensus 223 ~~v~~~~~sp~~~~~l~~~~~------------dg~i~~wd~~~~~~~~~~~~~-~~~v~~~~~spdg~~ 279 (279)
.....|+|++ +|.+.++... .+.|..++..++++...+... ...+++++|+||+++
T Consensus 476 nsPDnL~fd~-~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~aEpnGiafSPD~kt 544 (592)
T 4a9v_A 476 NSPDGLGFDK-AGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIGCEVTGISFSPDQKT 544 (592)
T ss_dssp CCEEEEEECT-TCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTTCEEEEEEECTTSSE
T ss_pred CCCCceEECC-CCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCCccccCCEECCCCCE
Confidence 3467899999 7777763321 125777777788876666544 346899999999974
No 351
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=81.29 E-value=6.2 Score=33.03 Aligned_cols=60 Identities=18% Similarity=0.241 Sum_probs=38.9
Q ss_pred eCcccccCCCCcEEEEecC------------CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEe
Q 023672 128 FPHMSASDPTSCVFASTTR------------DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAG 191 (279)
Q Consensus 128 ~~~~~~~~~~~~~l~s~~~------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~ 191 (279)
+|+-+.|+++|.+.+.... ...+..++..+++....+..... ..++.++|+||++.|++.
T Consensus 477 sPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~~fl~~P~~----aEpnGiafSPD~ktLfV~ 548 (592)
T 4a9v_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRRFMVGPIG----CEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEEEEEECCTT----CEEEEEEECTTSSEEEEE
T ss_pred CCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEEEEEeCCCC----ccccCCEECCCCCEEEEE
Confidence 3455667888877663321 12566677777876665543321 267899999999988843
No 352
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=81.13 E-value=26 Score=30.23 Aligned_cols=116 Identities=11% Similarity=0.064 Sum_probs=59.1
Q ss_pred CCcEEEEecCCC--cEEEEECCCCeeeEEEeccCccccccceeeEEECCC-CCEEEEe-c--C-----CeEEEEEccCCC
Q 023672 137 TSCVFASTTRDH--PIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPT-GTKIFAG-Y--N-----KSVRVFDVHRPG 205 (279)
Q Consensus 137 ~~~~l~s~~~d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~-~~~l~~~-~--d-----~~i~~~d~~~~~ 205 (279)
++.+++.|+.++ .+.+||+.+.+-...-.............++.+..+ +++++.| . + ..+.+||+.+..
T Consensus 500 ~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 500 DGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp TSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred CCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 666777776554 689999988764332210000000112223555655 4555544 3 2 468899998743
Q ss_pred C----ceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCC--------CcEEEEecCCCeE
Q 023672 206 R----DFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYS--------QTSAIYREDNMEL 257 (279)
Q Consensus 206 ~----~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~d--------g~i~~wd~~~~~~ 257 (279)
. .+..+.... ... .....++.+ . ++.+++.|+.+ ..|.+||+.+.+-
T Consensus 580 w~~~~~W~~~~~~p--~~~-R~~~~~~~~-~-~~~iyv~GG~~~~~~~~~~~~v~~yd~~t~~W 638 (695)
T 2zwa_A 580 ATEPITVIKKLQHP--LFQ-RYGSQIKYI-T-PRKLLIVGGTSPSGLFDRTNSIISLDPLSETL 638 (695)
T ss_dssp SSCCEEEEEEEECG--GGC-CBSCEEEEE-E-TTEEEEECCBCSSCCCCTTTSEEEEETTTTEE
T ss_pred cccceEEEEcCCCC--CCC-cccceEEEe-C-CCEEEEECCccCCCCCCCCCeEEEEECCCCeE
Confidence 1 022221110 011 111222233 2 36788888743 4589999987653
No 353
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=80.85 E-value=18 Score=31.23 Aligned_cols=65 Identities=12% Similarity=0.104 Sum_probs=41.9
Q ss_pred CCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccc--------cceeeEEECCCCCEEE--Ee-cCCeEEEEEccC
Q 023672 137 TSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEI--------TAAFSVAFNPTGTKIF--AG-YNKSVRVFDVHR 203 (279)
Q Consensus 137 ~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~--~~-~d~~i~~~d~~~ 203 (279)
+..++++-+.|+++|+|++.+++++............ .+-.-+... +.+++ .. .+|..++|.+..
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL~~~~~~~~s~L~~~~~~~~~Lrl~--~~~lv~y~P~~~G~Fk~~~l~~ 305 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDMVSQSDSDPSHFRKVEAVGEYLSLY--NNTLVTLLPLENGLFQMGTLLV 305 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEETTTTSCCCSSCCCCCCSCCCCEEES--SSEEEEEETTTTCEEEEEEEEC
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeeccccCccccccccCcccCcchhHhhe--eeEEEEEecCCCCeEEEEEEEE
Confidence 4669999999999999999999988887763221000 000111111 24444 23 678999999975
No 354
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=79.17 E-value=44 Score=31.86 Aligned_cols=109 Identities=8% Similarity=0.070 Sum_probs=67.8
Q ss_pred CCCCcEEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeec
Q 023672 135 DPTSCVFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTL 214 (279)
Q Consensus 135 ~~~~~~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~ 214 (279)
+|..+.+|.-. ..++.|+|+++...++...... .|.-=.|-.. +.|+--.+..|+-|++.....|.+.+ ..
T Consensus 74 nP~~~iiALra-g~~lQiFnl~~k~klks~~~~e------~VvfWkWis~-~~l~lVT~~aVyHW~~~~~s~P~k~f-dR 144 (1630)
T 1xi4_A 74 NPASKVIALKA-GKTLQIFNIEMKSKMKAHTMTD------DVTFWKWISL-NTVALVTDNAVYHWSMEGESQPVKMF-DR 144 (1630)
T ss_pred CCCcceEEEec-CCeEEEeehHHhhhhcccccCC------CceEEEecCC-CeeEEEcCCeEEEeccCCCCccHHHH-hc
Confidence 66776776654 7789999999988777777655 4444455433 34443467789999997533332222 11
Q ss_pred ccccCCCCCceEEEEEccCCCcEEEEEe-------CCCcEEEEecCCC
Q 023672 215 KGNKEGQAGIMSAIAFSPTHTGMLAIGS-------YSQTSAIYREDNM 255 (279)
Q Consensus 215 ~~~~~~~~~~v~~~~~sp~~~~~l~~~~-------~dg~i~~wd~~~~ 255 (279)
...+. ...|..-..++ +..+++..+ -.|.+.+|....+
T Consensus 145 ~~~L~--~~QIinY~~d~-~~kW~~l~gi~~~~~~v~G~mQLyS~er~ 189 (1630)
T 1xi4_A 145 HSSLA--GCQIINYRTDA-KQKWLLLTGISAQQNRVVGAMQLYSVDRK 189 (1630)
T ss_pred chhcc--cCeeEEeeeCC-CCCeEEEEeeccCCCcccceeeeeecccc
Confidence 11111 35677778888 667666433 3577889987543
No 355
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=79.09 E-value=20 Score=27.60 Aligned_cols=57 Identities=14% Similarity=0.166 Sum_probs=29.0
Q ss_pred eEEEEEccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC------cEEEEecCCCeEEEE
Q 023672 195 SVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ------TSAIYREDNMELLYV 260 (279)
Q Consensus 195 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg------~i~~wd~~~~~~~~~ 260 (279)
.+.+||+.+. ....+..+...... ..++ .. ++.+++.|+.++ .|.++++++++.+..
T Consensus 286 ~~~~yd~~~~--~W~~~~~~p~~r~~----~~~~--~~-~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~ 348 (357)
T 2uvk_A 286 STDIHLWHNG--KWDKSGELSQGRAY----GVSL--PW-NNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQ 348 (357)
T ss_dssp CCEEEECC-----CEEEEECSSCCBS----SEEE--EE-TTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEE
T ss_pred eEEEEecCCC--ceeeCCCCCCCccc----ceeE--Ee-CCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEee
Confidence 5778998863 22333333221111 1222 23 667888888653 356668887776543
No 356
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=77.88 E-value=3 Score=38.35 Aligned_cols=37 Identities=16% Similarity=0.170 Sum_probs=30.1
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccc
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYD 97 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~ 97 (279)
..+.+++..++..++++-+.|+++|||++.++.+...
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 3556667777888999999999999999999876443
No 357
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=76.41 E-value=24 Score=27.12 Aligned_cols=16 Identities=13% Similarity=0.102 Sum_probs=11.5
Q ss_pred CcEEEEECCCCeeeEE
Q 023672 148 HPIHLWDATTGLLRCT 163 (279)
Q Consensus 148 ~~i~i~d~~~~~~~~~ 163 (279)
..+.+||+.+.+-...
T Consensus 168 ~~v~~yd~~~~~W~~~ 183 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYA 183 (357)
T ss_dssp CEEEEEETTTTEEEEE
T ss_pred ccEEEEeCCCCcEEEC
Confidence 4688999988765443
No 358
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=75.17 E-value=41 Score=29.21 Aligned_cols=157 Identities=12% Similarity=0.057 Sum_probs=81.2
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCCcE
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTSCV 140 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 140 (279)
..|.++....++.+.+ |+.+| +..|+..++...... . ... .......|.++.. ..++..
T Consensus 146 ~~i~~i~~d~~g~lWi-gt~~G-l~~~~~~~~~~~~~~----~-~~~-------~~~~~~~i~~i~~-------d~~~~~ 204 (758)
T 3ott_A 146 NTIYSIIRTKDNQIYV-GTYNG-LCRYIPSNGKFEGIP----L-PVH-------SSQSNLFVNSLLE-------DTTRQC 204 (758)
T ss_dssp SCEEEEEECTTCCEEE-EETTE-EEEEETTTTEEEEEC----C-CCC-------TTCSSCCEEEEEE-------ETTTTE
T ss_pred CeEEEEEEcCCCCEEE-EeCCC-HhhCccCCCceEEec----C-CCc-------cccccceeEEEEE-------ECCCCE
Confidence 4688888887777554 45444 667777654321100 0 000 0001123555543 334444
Q ss_pred EEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeeccc-ccC
Q 023672 141 FASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKG-NKE 219 (279)
Q Consensus 141 l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~-~~~ 219 (279)
|..|+. +-|..+|..+++......... ..|.++...++|.+.++. ++-+.+++..+. .+........ ...
T Consensus 205 lWigt~-~Gl~~~~~~~~~~~~~~~l~~-----~~i~~i~~d~~g~lWigT-~~Gl~~~~~~~~--~~~~~~~~~~~~~~ 275 (758)
T 3ott_A 205 VWIGTE-GYLFQYFPSTGQIKQTEAFHN-----NSIKSLALDGNGDLLAGT-DNGLYVYHNDTT--PLQHIIHDSRNIQS 275 (758)
T ss_dssp EEEEEE-EEEEEEETTTTEEEEEEEEEE-----EEEEEEEECTTCCEEEEE-TTEEEEECCTTS--CCEEECCCTTCTTS
T ss_pred EEEEEC-CCCeEEcCCCCeEEeccCCCC-----CeEEEEEEcCCCCEEEEe-CCceeEEecCCC--cEEEEEcCCCCcCc
Confidence 444443 457888988765433221112 268888888888887765 456888887652 1221111100 001
Q ss_pred CCCCceEEEEEccCCCcEEEEEeCCCcEEEE
Q 023672 220 GQAGIMSAIAFSPTHTGMLAIGSYSQTSAIY 250 (279)
Q Consensus 220 ~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~w 250 (279)
-....|.++.... ++.+.+ |+..| +.++
T Consensus 276 l~~~~i~~i~~D~-~g~lWi-GT~~G-l~~~ 303 (758)
T 3ott_A 276 LTNNIIWNIFADQ-EHNIWL-GTDYG-ISLS 303 (758)
T ss_dssp CSCSCEEEEEECT-TCCEEE-EESSS-EEEE
T ss_pred CCcCeEEEEEEcC-CCCEEE-EeCCc-cccc
Confidence 1234688888877 555444 44556 5444
No 359
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=72.46 E-value=28 Score=26.18 Aligned_cols=106 Identities=9% Similarity=0.168 Sum_probs=52.5
Q ss_pred CCcEEEEecCC-------CcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEE-ec-C-----CeEEEEEcc
Q 023672 137 TSCVFASTTRD-------HPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFA-GY-N-----KSVRVFDVH 202 (279)
Q Consensus 137 ~~~~l~s~~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~-~~-d-----~~i~~~d~~ 202 (279)
++.+++.|+.+ ..+.+||+.+.+-...-...... .-.+++. .++++++. |. + ..+.+||+.
T Consensus 109 ~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r----~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~yd~~ 183 (318)
T 2woz_A 109 DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIKV----YGHNVIS-HNGMIYCLGGKTDDKKCTNRVFIYNPK 183 (318)
T ss_dssp TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSCE----ESCEEEE-ETTEEEEECCEESSSCBCCCEEEEETT
T ss_pred CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCcc----cccEEEE-ECCEEEEEcCCCCCCCccceEEEEcCC
Confidence 45566666643 24788899887644332222111 1112222 34555553 33 2 458999998
Q ss_pred CCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCC-----cEEEEecCCCe
Q 023672 203 RPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQ-----TSAIYREDNME 256 (279)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg-----~i~~wd~~~~~ 256 (279)
+. .............. ..++. - ++.+++.|+.++ .+.+||+.+.+
T Consensus 184 ~~--~W~~~~~~p~~r~~----~~~~~--~-~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 184 KG--DWKDLAPMKTPRSM----FGVAI--H-KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp TT--EEEEECCCSSCCBS----CEEEE--E-TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred CC--EEEECCCCCCCccc----ceEEE--E-CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 63 22222222111111 12222 2 567777776543 47788887653
No 360
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=71.79 E-value=30 Score=26.18 Aligned_cols=61 Identities=7% Similarity=0.106 Sum_probs=37.2
Q ss_pred cCCCCcEEEEecC-CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEE-Ee-cC-CeEEEEEccC
Q 023672 134 SDPTSCVFASTTR-DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AG-YN-KSVRVFDVHR 203 (279)
Q Consensus 134 ~~~~~~~l~s~~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~-~d-~~i~~~d~~~ 203 (279)
++++++.|+..+. ...|...++..+.....+. . .. ...++|++.+|+ +. .+ ..|..-++..
T Consensus 152 ~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~l~~--~------~~-~~~~~P~g~~iy~t~~~~~~~I~~~~ldG 216 (302)
T 3s25_A 152 CNTSDRYFYYNNPKNGQLYRYDTASQSEALFYD--C------NC-YKPVVLDDTNVYYMDVNRDNAIVHVNINN 216 (302)
T ss_dssp SEEETTEEEEECTTTCCEEEEETTTTEEEEEEC--S------CE-EEEEEEETTEEEEEEGGGTTEEEEECSSS
T ss_pred eeEECCEEEEEeCCCceEEEEECCCCCEEEEeC--C------Cc-cceeeecCCEEEEEEcCCCcEEEEEECCC
Confidence 3557777776654 6788888887766443332 1 11 123569988888 54 33 4566666654
No 361
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=69.79 E-value=36 Score=26.20 Aligned_cols=170 Identities=9% Similarity=0.025 Sum_probs=85.1
Q ss_pred CCceEEEEEccCCCeEEEeeCCCeEEE---EeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCC
Q 023672 60 NNFLKGIKWSPDGSSFLTSSEDKTLRI---FSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~dg~i~i---wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (279)
.+.+..+........|+.-+..|.+.- |++........ .......+....++.|..+..... -+
T Consensus 41 ~D~~~~~~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r~~~---------G~~i~~~l~l~~~e~i~~~~~~~~----~~ 107 (327)
T 3uc1_A 41 DDIVAHFFVCSTHDLILFFTTQGRVYRAKAYDLPEASRTAR---------GQHVANLLAFQPEERIAQVIQIRG----YT 107 (327)
T ss_dssp GGCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCSSSC---------CEEHHHHTTCCTTCCEEEEEEESS----TT
T ss_pred CCEEEEEEEeCCCCEEEEEeCCCeEEEEEHHHCcCCCccCC---------CEEHHHccCCCCCCEEEEEEEecc----CC
Confidence 344555555555556666666676543 34432211000 000001122334555655533211 13
Q ss_pred CCcEEEEecCCCcEEEEECCCCee-----e--EEEeccCccccccceeeEEE-CCCCCEEEEecCCeEEEEEcc--C---
Q 023672 137 TSCVFASTTRDHPIHLWDATTGLL-----R--CTYRAYDAVDEITAAFSVAF-NPTGTKIFAGYNKSVRVFDVH--R--- 203 (279)
Q Consensus 137 ~~~~l~s~~~d~~i~i~d~~~~~~-----~--~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~d~~i~~~d~~--~--- 203 (279)
+..+++..+.+|.++--.+..-.. + ..++... .+..+.. +.+..+++.+..|.+..+... .
T Consensus 108 ~e~~~v~~T~~G~iKr~~l~~~~~~~r~G~~~i~lke~D------~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~ 181 (327)
T 3uc1_A 108 DAPYLVLATRNGLVKKSKLTDFDSNRSGGIVAVNLRDND------ELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRP 181 (327)
T ss_dssp SSSEEEEEETTSEEEEEEGGGGCCCCSSCEESCBCCTTC------CEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCC
T ss_pred CCCEEEEEcCCCEEEEeEHHHhhccccCceEEEEECCCC------EEEEEEEecCCCEEEEEECCCeEEEEECcccccCc
Confidence 567899999999999887654211 1 1122111 3333333 344445556788888877766 2
Q ss_pred CCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 204 PGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
.++...-...+ .+ .....|.++...+ .+..|+..+..|.++.-.+
T Consensus 182 ~gr~a~Gv~~i--~L-~~~d~Vv~~~~~~-~~~~ll~~T~~G~~Krt~l 226 (327)
T 3uc1_A 182 MGRATSGVQGM--RF-NIDDRLLSLNVVR-EGTYLLVATSGGYAKRTAI 226 (327)
T ss_dssp CCTTSBCEESS--CC-CTTCCEEEEEECC-TTCEEEEEETTSEEEEEEG
T ss_pred CCcCCCCeeee--cC-CCCCEEEEEEEEC-CCCEEEEEeCCCcEEEEEH
Confidence 11111111111 11 2234577766665 5567888888998887765
No 362
>1suu_A DNA gyrase subunit A; topoisomerase,DNA gyrase, beta-propeller, beta-pinwheel, ISO; HET: DNA; 1.75A {Borrelia burgdorferi} SCOP: b.68.10.1
Probab=61.26 E-value=52 Score=25.04 Aligned_cols=172 Identities=10% Similarity=0.007 Sum_probs=85.1
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEeCC---CCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFSLP---ENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (279)
+.+..+........++..+..|.++-+... ....... .......+....++.|..+...+ .+ .+
T Consensus 47 D~l~~~~~~~~~~~ll~~T~~G~~~~~~~~~ip~~~r~~~---------G~~i~~~l~l~~~e~i~~~~~~~---~~-~~ 113 (312)
T 1suu_A 47 DEIVIALCVNTHDYLFMISNEGKLYLINAYEIKDSSRASK---------GQNISELINLGDQEEILTIKNSK---DL-TD 113 (312)
T ss_dssp CCEEEEEEEETTCEEEEEETTSEEEEEEGGGSCC----------------CBGGGTSCCCTTCCEEEEEEES---CC-CT
T ss_pred CEEEEEEEECCCCEEEEEECCCeEEEEEHHHCCCCCccCC---------CcChhhccCCCCCCEEEEEEEec---cC-CC
Confidence 445555555555667777888876655443 2111000 00011123334455555543211 11 13
Q ss_pred CcEEEEecCCCcEEEEECCCCe-----eeEEEeccCccccccceeeEEE-CCCCCEEEEecCCeEEEEEccCC---CCce
Q 023672 138 SCVFASTTRDHPIHLWDATTGL-----LRCTYRAYDAVDEITAAFSVAF-NPTGTKIFAGYNKSVRVFDVHRP---GRDF 208 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~-----~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~d~~i~~~d~~~~---~~~~ 208 (279)
..+++..+..|.++-..+..-. -+..+..... ..+..+.. .++..+++++.+|.+..+....- ++..
T Consensus 114 ~~~ll~~T~~G~~kr~~l~~~~~~r~~G~~~i~L~~~----d~lv~~~~~~~~~~i~l~T~~G~~~r~~~~ev~~~gR~~ 189 (312)
T 1suu_A 114 DAYLLLTTASGKIARFESTDFKAVKSRGVIVIKLNDK----DFVTSAEIVFKDEKVICLSKKGSAFIFNSRDVRLTNRGT 189 (312)
T ss_dssp TCEEEEEETTSEEEEEEGGGGCC----CEECBCCCTT----CCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTB
T ss_pred CCEEEEEeCCCeEEEEEHHHhhccCCCcEEEEecCCC----CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHccccCCCC
Confidence 4577888899999888774321 1111211111 13334433 44444555778999888887531 1111
Q ss_pred eeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC
Q 023672 209 EKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (279)
Q Consensus 209 ~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~ 253 (279)
.-...+. +. ....|.++..-. ++..+++.+..|..+...+.
T Consensus 190 ~Gv~~i~--L~-~~d~vv~~~~v~-~~~~l~~vt~~G~~kr~~~~ 230 (312)
T 1suu_A 190 QGVCGMK--LK-EGDLFVKVLSVK-ENPYLLIVSENGYGKRLNMS 230 (312)
T ss_dssp CCEECCC--CC-TTCCEEEEEECT-TCSEEEEEETTSEEEEEEGG
T ss_pred CCeEeEE--eC-CCCEEEEEEEEC-CCCeEEEEECCCceEEEEHH
Confidence 1111111 01 134566665554 45567778888888888763
No 363
>4h3o_A Lectin; cadmium, plant protein; 2.17A {Allium sativum} PDB: 1kj1_A* 1bwu_P* 1kj1_D* 1bwu_Q* 1bwu_A* 1bwu_D*
Probab=47.18 E-value=47 Score=20.35 Aligned_cols=25 Identities=12% Similarity=0.239 Sum_probs=15.8
Q ss_pred eEEECCCCCEEEEecCCeEEEEEccC
Q 023672 178 SVAFNPTGTKIFAGYNKSVRVFDVHR 203 (279)
Q Consensus 178 ~~~~~~~~~~l~~~~d~~i~~~d~~~ 203 (279)
.+.+..+|++++...++. .+|...+
T Consensus 54 ~L~l~~dGnLvL~d~~~~-~vWss~t 78 (105)
T 4h3o_A 54 SAVLQSDGNFVVYDSSGR-SLWASHS 78 (105)
T ss_dssp EEEECTTSCEEEECTTCC-EEEECCC
T ss_pred EEEEeCCccEEEECCCcE-EEEEecC
Confidence 577888888777554443 3576544
No 364
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=44.38 E-value=1.1e+02 Score=23.57 Aligned_cols=168 Identities=8% Similarity=-0.039 Sum_probs=81.1
Q ss_pred CCceEEEEEcc---CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCC
Q 023672 60 NNFLKGIKWSP---DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (279)
Q Consensus 60 ~~~v~~~~~~~---~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (279)
...|.++..-+ +..+++.++.+|.++.-.+........ .-...+....+..+..+... +
T Consensus 94 ~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~~l~~~~~~~r-----------~G~~~i~lke~D~lv~~~~~------~- 155 (327)
T 3uc1_A 94 EERIAQVIQIRGYTDAPYLVLATRNGLVKKSKLTDFDSNRS-----------GGIVAVNLRDNDELVGAVLC------S- 155 (327)
T ss_dssp TCCEEEEEEESSTTSSSEEEEEETTSEEEEEEGGGGCCCCS-----------SCEESCBCCTTCCEEEEEEE------C-
T ss_pred CCEEEEEEEeccCCCCCEEEEEcCCCEEEEeEHHHhhcccc-----------CceEEEEECCCCEEEEEEEe------c-
Confidence 34565554433 567899999999999988764321110 01111223334444444321 2
Q ss_pred CCcEEEEecCCCcEEEEECC--CC----e---eeEEEeccCccccccceeeEEECCCCCEEE-EecCCeEEEEEccCCC-
Q 023672 137 TSCVFASTTRDHPIHLWDAT--TG----L---LRCTYRAYDAVDEITAAFSVAFNPTGTKIF-AGYNKSVRVFDVHRPG- 205 (279)
Q Consensus 137 ~~~~l~s~~~d~~i~i~d~~--~~----~---~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~-~~~d~~i~~~d~~~~~- 205 (279)
....|+..+..|.+..+.+. .- + -+..+.... ...|.++...+.+..++ ++..|.++.-.+..-.
T Consensus 156 ~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~i~L~~----~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~ 231 (327)
T 3uc1_A 156 AGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQGMRFNI----DDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPV 231 (327)
T ss_dssp TTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEESSCCCT----TCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCB
T ss_pred CCCEEEEEECCCeEEEEECcccccCcCCcCCCCeeeecCCC----CCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccc
Confidence 23356666777877766665 21 1 111111111 11455555544444444 6688998888765310
Q ss_pred --CceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 206 --RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 206 --~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
+.-.-...+. +..-.+.+..+.... +...++..+.+|.+.-++.
T Consensus 232 ~~R~~~G~~~~~--l~~~~d~lv~~~~~~-~~~~i~l~T~~G~~ir~~~ 277 (327)
T 3uc1_A 232 QGRGGKGVLTVM--YDRRRGRLVGALIVD-DDSELYAVTSGGGVIRTAA 277 (327)
T ss_dssp CCTTSCCEESSC--CCTTTCSEEEEEEEC-TTCEEEEEEGGGCEEEEEG
T ss_pred cCcCCCcEEEEE--ecCCCCeEEEEEEeC-CCccEEEEcCCCeEEEEeh
Confidence 1001111111 111123355544444 3444555566676666654
No 365
>1zi0_A DNA gyrase subunit A; beta pinwheel, topoisomerase, spiralling beta pinwheel, DNA wrapping, isomerase, DNA bindng protein; HET: DNA; 2.60A {Escherichia coli}
Probab=42.18 E-value=1.1e+02 Score=23.15 Aligned_cols=125 Identities=8% Similarity=0.013 Sum_probs=63.6
Q ss_pred ecCCCceEEEEeeCcccccCCCCcEEEEecCCCcEEEEECCCCe-----eeEEEeccCccccccceeeEEE-CCCCCEEE
Q 023672 116 VTEGESVYDFCWFPHMSASDPTSCVFASTTRDHPIHLWDATTGL-----LRCTYRAYDAVDEITAAFSVAF-NPTGTKIF 189 (279)
Q Consensus 116 ~~~~~~v~~~~~~~~~~~~~~~~~~l~s~~~d~~i~i~d~~~~~-----~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~ 189 (279)
...++.|..+...+. + .++.+++..+..|.++--.+..-. -+..+..... ..+..+.. ..+..+++
T Consensus 91 l~~~e~i~~~~~~~~---~-~~~~~ll~~T~~G~~Krt~l~e~~~~~r~G~~~i~l~~~----d~lv~~~~~~~~~~i~l 162 (307)
T 1zi0_A 91 LEQDERITAILPVTE---F-EEGVKVFMATANGTVKKTVLTEFNRLRTAGKVAIKLVDG----DELIGVDLTSGEDEVML 162 (307)
T ss_dssp CCTTCCEEEEEEESC---C-CTTCEEEEEETTSEEEEEEGGGGTTCCTTCEESSCCCTT----CCEEEEEEECTTCEEEE
T ss_pred CCCCCEEEEEEEecc---C-CCCcEEEEEeCCCeEEEEEHHHhhccccCCeEEEEECCC----CEEEEEEEeCCCCEEEE
Confidence 344555655532111 1 245578888999999988764211 1111111111 13333333 44444555
Q ss_pred EecCCeEEEEEccCC---CCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEec
Q 023672 190 AGYNKSVRVFDVHRP---GRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRE 252 (279)
Q Consensus 190 ~~~d~~i~~~d~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~ 252 (279)
.+.+|.+..++...- ++...-...+ . -.....|.++...+ ++..+++.+..|.++-.++
T Consensus 163 ~T~~G~~irf~~~~v~~~gr~a~Gv~~i--~-L~~~d~Vv~~~~~~-~~~~ll~~T~~G~~Kr~~~ 224 (307)
T 1zi0_A 163 FSAEGKVVRFKESSVRAMGCNTTGVRGI--R-LGEGDKVVSLIVPR-GDGAILTATQNGYGKRTAV 224 (307)
T ss_dssp EETTSEEEEEEGGGSCBCCTTCCCEECC--C-CCTTCCEEEEECCC-SSCEEEEEETTSEEEEECG
T ss_pred ECCCCcEEEEEHHHcCccCCCCCCeEeE--E-eCCCCEEEEEEEec-CCCEEEEEEcCCceEEEEH
Confidence 778888888776431 1100001011 0 11234566665544 4556788888888887776
No 366
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=37.40 E-value=1.3e+02 Score=22.42 Aligned_cols=165 Identities=9% Similarity=0.009 Sum_probs=82.5
Q ss_pred CCceEEEEEcc-CCCeEEEeeCCCeEEEEeCCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCCC
Q 023672 60 NNFLKGIKWSP-DGSSFLTSSEDKTLRIFSLPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPTS 138 (279)
Q Consensus 60 ~~~v~~~~~~~-~~~~l~t~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 138 (279)
...|..+.... +..+++..+.+|.++...+.+-. ... .-...+....+..+..+.. ....
T Consensus 67 ~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~-~~~-----------~G~~~i~lkegD~l~~~~~-------~~~~ 127 (276)
T 3no0_A 67 EEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFE-YKA-----------QGMPIIKLTEGDEVVSIAS-------SVDE 127 (276)
T ss_dssp TCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTT-TCS-----------TTEECSCCCTTCCEEEEEE-------CCSS
T ss_pred CCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhh-hhc-----------CCeEEEecCCCCEEEEEEE-------eCCC
Confidence 45566664422 46789999999999999876432 110 0111123334444544432 1233
Q ss_pred cEEEEecCCCcEEEEECCCC-------eeeEEEeccCccccccceeeEEECCCCCEE-EEecCCeEEEEEccCC---CCc
Q 023672 139 CVFASTTRDHPIHLWDATTG-------LLRCTYRAYDAVDEITAAFSVAFNPTGTKI-FAGYNKSVRVFDVHRP---GRD 207 (279)
Q Consensus 139 ~~l~s~~~d~~i~i~d~~~~-------~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l-~~~~d~~i~~~d~~~~---~~~ 207 (279)
..++..+..|.+..++...- +-+..+..... ..|..+...+++..+ +++..|.++...+..- .+.
T Consensus 128 ~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~~i~L~~~----d~vv~~~~~~~~~~ll~~T~~G~~kr~~~~e~~~~~R~ 203 (276)
T 3no0_A 128 THILLFTKKGRVARFSVREVPPSTPGARGVQGIKLEKN----DETSGLRIWNGEPYLLVITAKGRVKKISHEEIPKTNRG 203 (276)
T ss_dssp CEEEEEETTSEEEEEEGGGSCBCCTTCCCEECCCCCTT----CCEEEEEEESSCSEEEEEETTSCEEEEEGGGSCCCCTT
T ss_pred CEEEEEECCCEEEEEEhhhCCCcCCCCCCEEEEccCCC----CEEEEEEEeCCCCEEEEEeCCCcEEEeEHHHcccCCCC
Confidence 46777777888777665321 11111111111 144444433444444 4668888888877531 111
Q ss_pred eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEE--EecC
Q 023672 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAI--YRED 253 (279)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~--wd~~ 253 (279)
.+-...+ ...+.+..+.... +...++..+.+|.+.. ++..
T Consensus 204 gkGv~~i-----~~~~~lv~~~~~~-~~~~i~~~t~~G~~ir~~~~~~ 245 (276)
T 3no0_A 204 VKGTEVS-----GTKDTLVDLIPIK-EEVELLITTKNGKAFYDKINQK 245 (276)
T ss_dssp CCCEECC-----CSSSCEEEEEEES-SEEEEEEEETTSCEEEEEEEGG
T ss_pred CcceEEE-----cCCCcEEEEEEeC-CCCEEEEEcCCCeEEEeeeCHH
Confidence 1111111 1123454444433 4445666677787766 7653
No 367
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=35.50 E-value=1.6e+02 Score=23.19 Aligned_cols=137 Identities=12% Similarity=0.057 Sum_probs=73.5
Q ss_pred cEEEEec-CCCcEEEEECCCCeeeEEEeccCccc-------------cccceeeEEECCC----CCEEE-Ee-cCCeEEE
Q 023672 139 CVFASTT-RDHPIHLWDATTGLLRCTYRAYDAVD-------------EITAAFSVAFNPT----GTKIF-AG-YNKSVRV 198 (279)
Q Consensus 139 ~~l~s~~-~d~~i~i~d~~~~~~~~~~~~~~~~~-------------~~~~v~~~~~~~~----~~~l~-~~-~d~~i~~ 198 (279)
.+++.+. ..+-|.++|+.+++..+.+...-... ....+..|+++|+ ++.|+ .. ....+.-
T Consensus 171 ~~aYItD~~~~gLIVydl~~~~swRv~~~~~~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~~ly~ 250 (381)
T 3q6k_A 171 TFVYITNFLRGALFIYDHKKQDSWNVTHPTFKAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAIKVYS 250 (381)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEECGGGSCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCSEEEE
T ss_pred cEEEEEcCCCCcEEEEECCCCcEEEEccCCCccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCCcEEE
Confidence 3444443 45678999999988766553111110 0126788999998 67777 33 3334443
Q ss_pred EE---ccCCCCceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecCC-C---eEEEEEeec--CCCEE
Q 023672 199 FD---VHRPGRDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDN-M---ELLYVLHGQ--EGGVT 269 (279)
Q Consensus 199 ~d---~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~-~---~~~~~~~~~--~~~v~ 269 (279)
.. ++... ....+..+ .. .+....-..+++.+.+|.++++--..+.|..|+..+ . +....+... -..+.
T Consensus 251 V~T~~L~~~~-~~~~v~~~-G~-kg~~s~~~~~~~D~~~G~ly~~~~~~~aI~~w~~~~~~~~~~n~~~l~~d~~l~~pd 327 (381)
T 3q6k_A 251 VNTKELKQKG-GKLNPELL-GN-RGKYNDAIALAYDPKTKVIFFAEANTKQVSCWNTQKMPLRMKNTDVVYTSSRFVFGT 327 (381)
T ss_dssp EEHHHHSSTT-CCCCCEEE-EE-CCTTCCEEEEEECTTTCEEEEEESSSSEEEEEETTSCSBCGGGEEEEEECTTCCSEE
T ss_pred EEHHHhhCcc-hhhceEEe-ee-cCCCCCcceEEEeCCCCeEEEEeccCCeEEEEeCCCCccccCceEEEEECCCccccC
Confidence 33 22211 11111111 00 111123345677532787888888888999999875 1 222333211 12577
Q ss_pred EEEEccCCC
Q 023672 270 HVSKLSSAY 278 (279)
Q Consensus 270 ~~~~spdg~ 278 (279)
++.+.++|.
T Consensus 328 ~~~i~~~g~ 336 (381)
T 3q6k_A 328 DISVDSKGG 336 (381)
T ss_dssp EEEECTTSC
T ss_pred eEEECCCCe
Confidence 787777663
No 368
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=34.95 E-value=50 Score=22.89 Aligned_cols=36 Identities=8% Similarity=0.122 Sum_probs=25.9
Q ss_pred CCceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeE
Q 023672 222 AGIMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMEL 257 (279)
Q Consensus 222 ~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~ 257 (279)
...+.++.|......-+++.+.++++.++|..-|+.
T Consensus 118 ~~hllsl~f~~g~aHaia~S~~g~~~tlFDPN~GEF 153 (188)
T 1ukf_A 118 RKHLLSLRFANVQGHAIACSCEGSQFKLFDPNLGEF 153 (188)
T ss_dssp CEEEEEEEETTTEEEEEEEEEETTEEEEEETTTEEE
T ss_pred CceEEEEEecCCCceeEEeccCCCeEEEeCCCCcee
Confidence 445667777763345566677889999999987764
No 369
>1wp5_A Topoisomerase IV; broken beta-propeller, hairpin-invaded beta-propeller, six- bladed beta-propeller; 1.79A {Geobacillus stearothermophilus} SCOP: b.68.10.1
Probab=33.53 E-value=1.6e+02 Score=22.50 Aligned_cols=173 Identities=8% Similarity=-0.015 Sum_probs=83.6
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEe---CCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFS---LPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (279)
+.+..+........|+..+..|.+.-+. +........ .......+....+..|..+...+ .+ .+
T Consensus 39 D~l~~~~~~~t~d~ll~fT~~Gr~~~~~~~elp~~~r~a~---------G~~i~~~i~L~~~e~Iv~~~~~~---~~-~~ 105 (323)
T 1wp5_A 39 DRLLAMLEMNTKDVLLLFTNKGNYLYCPVHELPDIRWKDL---------GQHIANIIPIDRDEEIIKAIPIN---DF-EL 105 (323)
T ss_dssp CCEEEEEEEETTSEEEEEETTSEEEEEEGGGSCBCCTTSC---------CEEGGGTSCCCTTCCEEEEEEES---CT-TS
T ss_pred CEEEEEEEECCCCEEEEEECCCEEEEEEHHHCcCCCCCCC---------CcChhhccCCCCCCEEEEEEEec---cc-CC
Confidence 4455555555556677777788755443 332211000 00011112334455555543211 11 13
Q ss_pred CcEEEEecCCCcEEEEECCCC------eeeEEEeccCccccccceeeEEE-CCCCCEEEEecCCeEEEEEccC---CCCc
Q 023672 138 SCVFASTTRDHPIHLWDATTG------LLRCTYRAYDAVDEITAAFSVAF-NPTGTKIFAGYNKSVRVFDVHR---PGRD 207 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~------~~~~~~~~~~~~~~~~~v~~~~~-~~~~~~l~~~~d~~i~~~d~~~---~~~~ 207 (279)
+.+++.++..|.++-..+..- +-+..+..... ..+..+.. ..+..+++.+.+|.+..+.... .++.
T Consensus 106 ~~~ll~~T~~G~iKrt~l~e~~~~~r~~G~~ai~l~e~----d~lv~~~~~~~~~~i~l~T~~G~~irf~~~ev~~~gR~ 181 (323)
T 1wp5_A 106 NGYFLFVTRNGMVKKTELKHYKAQRYSKPLTGINLKND----DQVVDVHLTDGMNELFLVTHNGYALWFDESEVSIVGVR 181 (323)
T ss_dssp SCEEEEEETTSEEEEEEGGGGCCSCCSSCEECSCCCTT----CCEEEEEEECSCSEEEEEETTSEEEEEEGGGSCBCCSS
T ss_pred CceEEEEeCCCeEEEeEHHHhhhccccCceEEEEeCCC----CEEEEEEEeCCCCEEEEEeCCCcEEEEEHHHCcccCCC
Confidence 557888999999998877421 11222222111 13333333 3344455577888888887753 1111
Q ss_pred eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC
Q 023672 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (279)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~ 253 (279)
..-...+. -.....|.++..-+.+...|++.+..|..+..++.
T Consensus 182 a~GV~~i~---L~~~d~Vv~~~~~~~~~~~ll~vt~~G~gKr~~~~ 224 (323)
T 1wp5_A 182 AAGVKGMN---LKEGDYIVSGQLITSKDESIVVATQRGAVKKMKLT 224 (323)
T ss_dssp CCCEECCC---CCTTCCEEEEEEECCTTCEEEEEETTSEEEEEEGG
T ss_pred CcCEEEEE---eCCCCEEEEEEEEcCCCcEEEEEECCCceEEEEHH
Confidence 11111110 11234566665544133267777888887777653
No 370
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=33.48 E-value=2.4e+02 Score=24.59 Aligned_cols=30 Identities=13% Similarity=0.098 Sum_probs=26.4
Q ss_pred CCcEEEEEeCCCcEEEEecCCCeEEEEEee
Q 023672 234 HTGMLAIGSYSQTSAIYREDNMELLYVLHG 263 (279)
Q Consensus 234 ~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~ 263 (279)
+..++++-+.|.++|+||+++++++.+..-
T Consensus 230 ~~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 230 HERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp TTTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred CCcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 457999999999999999999998877764
No 371
>2zux_A YESW protein; beta-propeller, lyase, rhamnose complex; HET: RAM; 1.32A {Bacillus subtilis} PDB: 2z8s_A* 2z8r_A*
Probab=32.29 E-value=2.3e+02 Score=23.93 Aligned_cols=44 Identities=7% Similarity=0.032 Sum_probs=30.7
Q ss_pred CCCCceEEEEEccCC-CcEEEEEeCCC----cEEEEecCCCeEEEEEee
Q 023672 220 GQAGIMSAIAFSPTH-TGMLAIGSYSQ----TSAIYREDNMELLYVLHG 263 (279)
Q Consensus 220 ~~~~~v~~~~~sp~~-~~~l~~~~~dg----~i~~wd~~~~~~~~~~~~ 263 (279)
+|...+....|.|+. +.-++.+.+++ -..+.|.++|+.+.....
T Consensus 361 gHGDa~hv~dldP~r~GlEv~~~~E~~~~~~G~~~~dA~tG~vlw~~~~ 409 (591)
T 2zux_A 361 GHGDALHTGDLDPGRPGLEVFQVHEDKNAKYGLSFRDAATGKILWGVYA 409 (591)
T ss_dssp CCCSCEEEECCCTTSSSCEEEEECCCTTSSCSEEEEETTTCCEEEEECC
T ss_pred CCCCeeEEeecCCCCCCcEEEEEecCCCCCCccEEEECCCCcEEEEcCC
Confidence 778888888888843 34555655542 255689999999877764
No 372
>3mez_A Mannose-specific lectin 3 chain 1; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=31.41 E-value=94 Score=19.19 Aligned_cols=24 Identities=17% Similarity=0.203 Sum_probs=13.9
Q ss_pred eEEECCCCCEEEEecCCeEEEEEc
Q 023672 178 SVAFNPTGTKIFAGYNKSVRVFDV 201 (279)
Q Consensus 178 ~~~~~~~~~~l~~~~d~~i~~~d~ 201 (279)
.+.+..+|++++...++...+|.-
T Consensus 53 ~l~l~~dGNLVl~~~~~~~~vW~S 76 (111)
T 3mez_A 53 TLRLNNRGQLEIHSANSNTPVWVY 76 (111)
T ss_dssp EEEECTTSCEEEECSSCSSCSEEE
T ss_pred EEEEcCCCcEEEEeCCCCEEEEEe
Confidence 567777777766544443345643
No 373
>3b7f_A Glycosyl hydrolase, BNR repeat; 7-bladed beta-propeller fold, structural genomics, joint CEN structural genomics, JCSG; 2.20A {Ralstonia eutropha}
Probab=31.20 E-value=1.9e+02 Score=22.52 Aligned_cols=96 Identities=9% Similarity=0.016 Sum_probs=48.2
Q ss_pred ceeeEEECCC--CCEEEEec-----------CCeEEEEEccCCCCceeeeeecccccCCCC----CceEEEEEccCCCcE
Q 023672 175 AAFSVAFNPT--GTKIFAGY-----------NKSVRVFDVHRPGRDFEKYSTLKGNKEGQA----GIMSAIAFSPTHTGM 237 (279)
Q Consensus 175 ~v~~~~~~~~--~~~l~~~~-----------d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~----~~v~~~~~sp~~~~~ 237 (279)
.+.++.++|. +.++++.. ++...+|....++..+..+..- +.... .....++++|.+...
T Consensus 279 ~~~~i~~~p~~~~~l~~~t~~~~~~w~~~~~~~~~~~~~S~DgG~tW~~~~~g---lp~~~~~~~~~~~~~~~~p~~~~~ 355 (394)
T 3b7f_A 279 IGFPIVVHQRDPRTVWVFPMDGSDVWPRVSPGGKPAVYVTRDAGESWQRQDRG---LPTDQAWLTVKRQAMTADAHAPVG 355 (394)
T ss_dssp CEEEEEECSSCTTCEEEEECBCCSSTTCCBCCSSCCEEEESSTTSCCEEECBT---SCCSSCCCCCCTBSEEECCSSSCC
T ss_pred ceEEEEECCCCCCEEEEEeccCCccceeecCCCceeEEEECCCCCCceECCCC---CCCccccceEEEEEEEECCCCCCE
Confidence 3467888763 33444321 3345677666655555544211 11100 012457888844455
Q ss_pred EEEEeCCCcEEEEecCCCeEEEEEeecCCCEEEEEEc
Q 023672 238 LAIGSYSQTSAIYREDNMELLYVLHGQEGGVTHVSKL 274 (279)
Q Consensus 238 l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~s 274 (279)
|+.++.++.|..-+ ..++.-..+..+-..+.+++|.
T Consensus 356 l~~g~~~g~l~~S~-D~G~tW~~~~~~lp~~~~v~~~ 391 (394)
T 3b7f_A 356 VYFGTTGGEIWASA-DEGEHWQCIASHLPHIYAVQSA 391 (394)
T ss_dssp EEEECTTSCEEEES-STTSBCEEEECSCSCEEEEEEE
T ss_pred EEEEeCCCeEEEEC-CCCCCceEcccCCCCeeEEEEe
Confidence 66676566554322 2333333444444467787774
No 374
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=29.17 E-value=1.8e+02 Score=21.60 Aligned_cols=89 Identities=10% Similarity=-0.066 Sum_probs=45.8
Q ss_pred CCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccCCCCceeeeeecccccCCCCCceE
Q 023672 147 DHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHRPGRDFEKYSTLKGNKEGQAGIMS 226 (279)
Q Consensus 147 d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~ 226 (279)
||.|..|-......+.. +.. ....|..++.-..... +. .||.|+.|=....++..... .....|.
T Consensus 158 ~G~v~~wG~n~~gqlg~---p~~--~~~~v~~i~~G~~hs~-al-~~G~v~~wG~n~~gqlg~p~--------~~~~~v~ 222 (282)
T 3qhy_B 158 NGGVIAWGDNYFGQTTV---PAE--AQSGVDDVAGGIFHSL-AL-KDGKVIAWGDNRYKQTTVPT--------EALSGVS 222 (282)
T ss_dssp TTEEEEEECCTTSTTSC---CGG--GGSSEEEEEECSSEEE-EE-ETTEEEEEECCTTSTTCCCG--------GGGSSCC
T ss_pred CCEEEEecCCCCCCCCC---cee--cCCCeEEEEecCCEEE-EE-ECCeEEEEECCCCCCCCCCc--------ccCCCce
Confidence 67787776543211110 000 0114556655444333 34 78999999776533221110 1123477
Q ss_pred EEEEccCCCcEEEEEeCCCcEEEEecCC
Q 023672 227 AIAFSPTHTGMLAIGSYSQTSAIYREDN 254 (279)
Q Consensus 227 ~~~~sp~~~~~l~~~~~dg~i~~wd~~~ 254 (279)
.++... ...++++ ||.|+.|=...
T Consensus 223 ~i~~G~-~h~~al~---~g~v~~wG~n~ 246 (282)
T 3qhy_B 223 AIASGE-WYSLALK---NGKVIAWGSSR 246 (282)
T ss_dssp EEEECS-SCEEEEE---TTEEEEESTTC
T ss_pred EEEcCC-CEEEEEE---CCEEEEecCCC
Confidence 777655 4333333 89999996543
No 375
>3l6v_A GYRA, DNA gyrase subunit A; gyrase A C-terminal domain, GYRA C-terminal domain, DNA wrapping, beta-strand-bearing proline, ATP-binding; HET: DNA; 2.19A {Xanthomonas campestris PV}
Probab=28.11 E-value=2.2e+02 Score=22.34 Aligned_cols=126 Identities=13% Similarity=0.083 Sum_probs=60.6
Q ss_pred CCceEEEEEccCCCeEEEeeCCCeEEEEe---CCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCC
Q 023672 60 NNFLKGIKWSPDGSSFLTSSEDKTLRIFS---LPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDP 136 (279)
Q Consensus 60 ~~~v~~~~~~~~~~~l~t~~~dg~i~iwd---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 136 (279)
.+.+..+........|+..+..|.+.-+. +....... ........+....+..|..+..... + .
T Consensus 45 ~D~l~~~~~~~t~d~ll~fT~~G~~~~~~~~eip~~~r~a---------~G~~i~~ll~L~~~e~Iv~~~~~~~---~-~ 111 (370)
T 3l6v_A 45 EDFIDQLWLVNTHDTLLTFTSSGKVFWLPVHQLPEAGSNA---------RGRPIINWIPLESGERVQAVLPVRE---Y-A 111 (370)
T ss_dssp CCCEEEEEEECTTCEEEEEETTSEEEEEEGGGSCBCCTTS---------CCEEGGGSCCCCTTCCEEEEEEESC---C-C
T ss_pred CCEEEEEEEecCCCEEEEEeCCCeEEEEEHHHCcCCCccc---------CCcCHhhccCCCCCCEEEEEEEecc---C-C
Confidence 34555555555555666666677655443 33221100 0001111223345556665543111 1 2
Q ss_pred CCcEEEEecCCCcEEEEECCCCe-----eeEEEeccCccccccceeeEE-ECCCCCEEEEecCCeEEEEEcc
Q 023672 137 TSCVFASTTRDHPIHLWDATTGL-----LRCTYRAYDAVDEITAAFSVA-FNPTGTKIFAGYNKSVRVFDVH 202 (279)
Q Consensus 137 ~~~~l~s~~~d~~i~i~d~~~~~-----~~~~~~~~~~~~~~~~v~~~~-~~~~~~~l~~~~d~~i~~~d~~ 202 (279)
++.+|+.++..|.++-..+..-. -+..+..... ..+..+. ...+...++.+.+|.+..++..
T Consensus 112 ~~~~ll~~T~~G~vKrt~l~e~~~~~~~G~~ai~L~~~----d~lv~v~~~~~~~~i~l~T~~G~~irf~~~ 179 (370)
T 3l6v_A 112 DNRYVFMATRNGTVKKTPLSEFAFRLARGKIAINLDEG----DALVGVALTDGDRDVLLFASNGKTVRFGES 179 (370)
T ss_dssp TTCEEEEEETTSEEEEEEGGGGCSCCTTCEESSCCCTT----CCEEEEEEECSCCEEEEEETTSEEEEEEGG
T ss_pred CCcEEEEEeCCCeEEEeEHHHhhcccCCceEEEEeCCC----CEEEEEEEeCCCceEEEEeCCCeEEEEEcc
Confidence 35588899999999987764321 1111111111 1222333 3334445556788887777654
No 376
>3enb_A PRE-mRNA-processing-splicing factor 8; PRP8 domain IV, beta finger, RNAse H, spliceosome, U5-220K, mutation, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: c.55.3.14 PDB: 3lru_A
Probab=26.50 E-value=1.3e+02 Score=21.29 Aligned_cols=39 Identities=13% Similarity=0.157 Sum_probs=30.4
Q ss_pred ceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe
Q 023672 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (279)
Q Consensus 224 ~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 262 (279)
.|+.+..++.-..-+.+-.-+|.|.+++.++|++.-.+-
T Consensus 16 nvYrvt~h~T~eGn~~tkpiNG~ifIfnP~TGqLflKii 54 (222)
T 3enb_A 16 NVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKII 54 (222)
T ss_dssp TSSEEEEEECTTSCEEEEEECEEEEEECTTTCEEEEEEE
T ss_pred cEEEEEEEeccCCCceeecccceEEEEeCCCCcEEEEEE
Confidence 466777776555668888889999999999999865543
No 377
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=24.17 E-value=3.5e+02 Score=23.47 Aligned_cols=78 Identities=8% Similarity=0.038 Sum_probs=44.1
Q ss_pred CCeEEEEEccCCC------CceeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCc--EEEEecCCCe-EEEE-Ee
Q 023672 193 NKSVRVFDVHRPG------RDFEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQT--SAIYREDNME-LLYV-LH 262 (279)
Q Consensus 193 d~~i~~~d~~~~~------~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~--i~~wd~~~~~-~~~~-~~ 262 (279)
.+.|.+.|+..+. ...+.+ +. ......+..+.|.. + .++++...++. |.++|+.+++ .... +.
T Consensus 319 ~~~l~~~~~~~~~~~~~~~~~~~~~--~~---~~~~~~l~~~~~~~-~-~l~~~~~~~~~~~l~~~~~~~g~~~~~~~i~ 391 (711)
T 4hvt_A 319 AGSLVALHFTDLLKTESDKTSLKIL--FT---PTANEVFNFISTTK-D-RVFLATYDNVVAKVVTFTLENEQWTKPVVLK 391 (711)
T ss_dssp TTCEEEEEGGGGGSCGGGCTTCEEE--EC---CCTTEEEEEEEECS-S-CEEEEEEETTEEEEEEECEETTEECCCEEEC
T ss_pred CCeEEEEECCcccccccccccceEE--EC---CCCCCeEEEEEEEC-C-EEEEEEEECCEEEEEEEECCCCceEEEeccC
Confidence 5678888987631 112211 11 12344677888887 4 57777777775 6778876664 2223 32
Q ss_pred ec-CCCEEEEEEccCC
Q 023672 263 GQ-EGGVTHVSKLSSA 277 (279)
Q Consensus 263 ~~-~~~v~~~~~spdg 277 (279)
.. .+.+....+++++
T Consensus 392 lp~~~~~~~~~~~~~~ 407 (711)
T 4hvt_A 392 LPYQNAIFGMSSYEEE 407 (711)
T ss_dssp CCSTTCEEEEECCTTC
T ss_pred CCCCeEEEEEeecCcC
Confidence 22 2456555565655
No 378
>1b2p_A Protein (lectin); mannose-binding lectin, monocot, aglutinin, bluebell bulbs, carbohydrate interactions, sugar binding protein; 1.70A {Hyacinthoides hispanica} SCOP: b.78.1.1
Probab=24.01 E-value=1.4e+02 Score=18.70 Aligned_cols=24 Identities=13% Similarity=0.293 Sum_probs=14.6
Q ss_pred eEEECCCCCEEEEecCCeEEEEEcc
Q 023672 178 SVAFNPTGTKIFAGYNKSVRVFDVH 202 (279)
Q Consensus 178 ~~~~~~~~~~l~~~~d~~i~~~d~~ 202 (279)
.+.+..+|++++...++. .+|.-.
T Consensus 64 ~l~l~~dGNLVl~d~~~~-~lW~S~ 87 (119)
T 1b2p_A 64 RAVLQPDGVLVVITNENV-TVWQSP 87 (119)
T ss_dssp EEEECTTSCEEEECTTCC-EEEECS
T ss_pred EEEEccCCEEEEEeCCCc-EEEcCC
Confidence 467777887776543333 467654
No 379
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=22.77 E-value=2.4e+02 Score=20.92 Aligned_cols=159 Identities=11% Similarity=-0.020 Sum_probs=83.4
Q ss_pred CceEEEEEccCCCeEEEeeCCCeEEEEe---CCCCccccccccccccCCCCcccceeeecCCCceEEEEeeCcccccCCC
Q 023672 61 NFLKGIKWSPDGSSFLTSSEDKTLRIFS---LPENGISYDVNACSLAKDQDSYEASLVVTEGESVYDFCWFPHMSASDPT 137 (279)
Q Consensus 61 ~~v~~~~~~~~~~~l~t~~~dg~i~iwd---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 137 (279)
+.+..+.-......|+.-+.+|.++--. +..... . . + ...++.|..+.. . .+ +
T Consensus 24 D~~~~~~~~~t~~~ll~fT~~G~v~~~~~~~lp~~~~------------~-~----l-l~~~e~i~~v~~-~---~~--~ 79 (276)
T 3no0_A 24 APVVNILRVPFTEGLFLVSNRGRVYWIAGSQALQGSK------------V-S----L-KSREEKIVGAFI-R---EK--F 79 (276)
T ss_dssp CCEEEEEEEETTSCEEEEETTSEEEEECSHHHHTSEE------------C-C----C-SSTTCCEEEEEE-G---GG--S
T ss_pred CeEEEEEEECCCCEEEEEcCCCeEEEEEhhhCccCcc------------c-c----c-CCCCCEEEEEEC-C---cC--C
Confidence 4566665555555676777788765433 221100 0 0 2 344556665532 1 22 4
Q ss_pred CcEEEEecCCCcEEEEECCCCe------eeEEEeccCccccccceeeEEECCCCC-EEEEecCCeEEEEEccC---CCCc
Q 023672 138 SCVFASTTRDHPIHLWDATTGL------LRCTYRAYDAVDEITAAFSVAFNPTGT-KIFAGYNKSVRVFDVHR---PGRD 207 (279)
Q Consensus 138 ~~~l~s~~~d~~i~i~d~~~~~------~~~~~~~~~~~~~~~~v~~~~~~~~~~-~l~~~~d~~i~~~d~~~---~~~~ 207 (279)
..+++..+.+|.++-..+..-. ....++... .+..+....... .++.+..|.+..+.... .++.
T Consensus 80 ~~~~v~~T~~G~iKr~~l~~~~~~~~G~~~i~lkegD------~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~ 153 (276)
T 3no0_A 80 GNRLLLATKKGYVKKIPLAEFEYKAQGMPIIKLTEGD------EVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPG 153 (276)
T ss_dssp CSEEEEEETTSEEEEEEGGGTTTCSTTEECSCCCTTC------CEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTT
T ss_pred CCEEEEEeCCCEEEEEEHHHhhhhcCCeEEEecCCCC------EEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCC
Confidence 4588889999999988765421 111122111 344444443443 44467888888887643 1111
Q ss_pred eeeeeecccccCCCCCceEEEEEccCCCcEEEEEeCCCcEEEEecC
Q 023672 208 FEKYSTLKGNKEGQAGIMSAIAFSPTHTGMLAIGSYSQTSAIYRED 253 (279)
Q Consensus 208 ~~~~~~~~~~~~~~~~~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~ 253 (279)
..-...+ .+.. ...|..+...+ ++..++..+..|.++...+.
T Consensus 154 a~Gv~~i--~L~~-~d~vv~~~~~~-~~~~ll~~T~~G~~kr~~~~ 195 (276)
T 3no0_A 154 ARGVQGI--KLEK-NDETSGLRIWN-GEPYLLVITAKGRVKKISHE 195 (276)
T ss_dssp CCCEECC--CCCT-TCCEEEEEEES-SCSEEEEEETTSCEEEEEGG
T ss_pred CCCEEEE--ccCC-CCEEEEEEEeC-CCCEEEEEeCCCcEEEeEHH
Confidence 0100111 1111 34566665555 45677788888988877653
No 380
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=21.35 E-value=1.5e+02 Score=18.23 Aligned_cols=59 Identities=8% Similarity=-0.023 Sum_probs=29.7
Q ss_pred EEEEecCCCcEEEEECCCCeeeEEEeccCccccccceeeEEECCCCCEEEEecCCeEEEEEccC
Q 023672 140 VFASTTRDHPIHLWDATTGLLRCTYRAYDAVDEITAAFSVAFNPTGTKIFAGYNKSVRVFDVHR 203 (279)
Q Consensus 140 ~l~s~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i~~~d~~~ 203 (279)
+.+.-..||.+.+|+...+..+..-..... . .-..+.+..+|++++...++.+ +|.-.+
T Consensus 26 ~~L~~q~dGNLvL~~~~~~~~vWssnt~~~-~---~~~~l~l~~dGNLVl~d~~~~~-iW~S~t 84 (113)
T 3mez_B 26 YSLVMRDDCNLVLTKGSKTNIVWESGTSGR-G---QHCFMRLGHSGELDITDDRLNT-VFVSNT 84 (113)
T ss_dssp EEEEECTTSCEEEEETTTTEEEEECCCTTS-C---SSCEEEECTTSCEEEECTTSCE-EEECSC
T ss_pred EEEEEcCCCEEEEEECCCCEEEEECCcccC-C---cCEEEEEeCCCcEEEECCCCCE-EEECCC
Confidence 444445566666665432333333221111 0 1235778888888775544443 676654
No 381
>3e9l_A PRE-mRNA-processing-splicing factor 8; nucleotidyl transfer, disease mutation, MRN splicing, nucleus, phosphoprotein, retinitis pigmentosa; 1.95A {Homo sapiens} SCOP: c.55.3.14
Probab=21.03 E-value=1.8e+02 Score=21.04 Aligned_cols=39 Identities=13% Similarity=0.157 Sum_probs=30.2
Q ss_pred ceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe
Q 023672 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (279)
Q Consensus 224 ~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 262 (279)
.|+.+..++.-..-+.+-.-+|.|.+++.++|++.-.+-
T Consensus 25 nvYrvt~h~T~eGn~~tkpiNG~ifIfnP~TGqLflKii 63 (257)
T 3e9l_A 25 NVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKII 63 (257)
T ss_dssp TSSEEEEEECSSSCEEEEEECEEEEEECTTTCEEEEEEE
T ss_pred cEEEEEEEeccCCCceeccccceEEEEeCCCCcEEEEEE
Confidence 466777776555568888889999999999999865543
No 382
>3sbt_A PRE-mRNA-splicing factor 8; rnaseh like domain, VHS like domain, U5 snRNP assembly; 1.80A {Saccharomyces cerevisiae} SCOP: c.55.3.14 PDB: 3e66_A 3e9o_A* 3e9p_A
Probab=20.88 E-value=1.7e+02 Score=21.14 Aligned_cols=39 Identities=10% Similarity=0.055 Sum_probs=30.3
Q ss_pred ceEEEEEccCCCcEEEEEeCCCcEEEEecCCCeEEEEEe
Q 023672 224 IMSAIAFSPTHTGMLAIGSYSQTSAIYREDNMELLYVLH 262 (279)
Q Consensus 224 ~v~~~~~sp~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~ 262 (279)
.|+.+..++.-..-+.+-.-+|.|.+++.++|++.-.+-
T Consensus 24 nvYrvt~hkT~eGn~~tkpiNG~ififnP~TGqLfLKii 62 (260)
T 3sbt_A 24 NVYRVTVHKTFEGNVATKAINGCIFTLNPKTGHLFLKII 62 (260)
T ss_dssp TTSEEEEEECTTSCEEEEEECEEEEEECTTTCEEEEEEE
T ss_pred cEEEEEEEeccCCCceeccccceEEEEeCCCCcEEEEEE
Confidence 466777776555568888889999999999999865543
No 383
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=20.74 E-value=3.6e+02 Score=23.24 Aligned_cols=27 Identities=15% Similarity=0.121 Sum_probs=20.4
Q ss_pred CCceEEEEEccCCC--cEEEEEeCCCcEEE
Q 023672 222 AGIMSAIAFSPTHT--GMLAIGSYSQTSAI 249 (279)
Q Consensus 222 ~~~v~~~~~sp~~~--~~l~~~~~dg~i~~ 249 (279)
..+|..+.+++ .. ..|+.++.++.++|
T Consensus 449 ~~pI~~l~l~~-~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 449 FEPVQTLLLSS-KKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp CCCCCEEEECC-SSSSCEEEEECSSCEEEE
T ss_pred CCcceeeEecc-CCCccEEEEEEcCeEEEE
Confidence 46788999998 66 78888887775544
No 384
>3dzw_A Agglutinin; lectin, mannobiose, mannose-alpha1, 3-mannose, D sugar binding protein; HET: MAN; 1.70A {Narcissus pseudonarcissus} SCOP: b.78.1.1 PDB: 1npl_A* 1jpc_A* 1msa_A* 1niv_A*
Probab=20.08 E-value=1.6e+02 Score=17.95 Aligned_cols=25 Identities=4% Similarity=0.218 Sum_probs=15.3
Q ss_pred eEEECCCCCEEEEecCCeEEEEEccC
Q 023672 178 SVAFNPTGTKIFAGYNKSVRVFDVHR 203 (279)
Q Consensus 178 ~~~~~~~~~~l~~~~d~~i~~~d~~~ 203 (279)
.+.+..+|++++...++. .+|.-.+
T Consensus 53 ~l~l~~dGNLvl~~~~~~-~~W~S~t 77 (109)
T 3dzw_A 53 HLSMQSDGNLVVYSPRNN-PIWASNT 77 (109)
T ss_dssp EEEECTTSCEEEECTTSC-EEEECCC
T ss_pred EEEEeCCCCEEEECCCCC-EEEECCC
Confidence 567788888777543443 3675543
Done!