BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023678
(279 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QZ9|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Ii From Vibrio Cholerae
pdb|2QZ9|B Chain B, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Ii From Vibrio Cholerae
pdb|2QZ9|C Chain C, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Ii From Vibrio Cholerae
pdb|2R00|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Ii Complexed With Asa From Vibrio Cholerae
pdb|2R00|B Chain B, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Ii Complexed With Asa From Vibrio Cholerae
Length = 336
Score = 177 bits (448), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 128/209 (61%), Gaps = 4/209 (1%)
Query: 56 LSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISK 115
L VL +R+FP + +LAS+RS GK F K V+ + E + V IALFSAGG +S
Sbjct: 20 LEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSA 79
Query: 116 KFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTII 175
K+ PIA E G +V+DN+S FR ++PLV+PEVNPEA++ + +IANPNCSTI
Sbjct: 80 KWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFR----NRNIIANPNCSTIQ 135
Query: 176 CLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTCKIFSQQYAF 235
L+A P++ + R+ V+TYQ ++EL QT ++L G P FSQQ AF
Sbjct: 136 MLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAF 195
Query: 236 NLFSHNAPVLENGYNEEEMKMVKETRKIW 264
N ++NGY +EEMKMV ET+KI+
Sbjct: 196 NCIPQIDQFMDNGYTKEEMKMVWETQKIF 224
>pdb|2R00|C Chain C, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Ii Complexed With Asa From Vibrio Cholerae
Length = 336
Score = 172 bits (437), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/209 (44%), Positives = 127/209 (60%), Gaps = 4/209 (1%)
Query: 56 LSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISK 115
L VL +R+FP + +LAS+RS GK F K V+ + E + V IALFSAGG +S
Sbjct: 20 LEVLQEREFPVDELFLLASERSEGKTYRFNGKTVRVQNVEEFDWSQVHIALFSAGGELSA 79
Query: 116 KFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTII 175
K+ PIA E G +V+DN+S FR ++PLV+PEVNPEA++ + +IANPN STI
Sbjct: 80 KWAPIAAEAGVVVIDNTSHFRYDYDIPLVVPEVNPEAIAEFR----NRNIIANPNXSTIQ 135
Query: 176 CLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTCKIFSQQYAF 235
L+A P++ + R+ V+TYQ ++EL QT ++L G P FSQQ AF
Sbjct: 136 MLVALKPIYDAVGIERINVTTYQSVSGAGKAGIDELAGQTAKLLNGYPAETNTFSQQIAF 195
Query: 236 NLFSHNAPVLENGYNEEEMKMVKETRKIW 264
N ++NGY +EEMKMV ET+KI+
Sbjct: 196 NCIPQIDQFMDNGYTKEEMKMVWETQKIF 224
>pdb|2YV3|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
pdb|2YV3|B Chain B, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Thermus Thermophilus Hb8
Length = 331
Score = 165 bits (418), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 123/211 (58%), Gaps = 7/211 (3%)
Query: 53 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGS 112
+E L VL R+FP +++ AS RSAG +L+F+ + VE L E VD+ L SAGG
Sbjct: 14 REILKVLEARNFPLSELRLYASPRSAGVRLAFRGEEIPVEPLPEGPLP-VDLVLASAGGG 72
Query: 113 ISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCS 172
IS+ + E G++VVDNSSA+R VPLV+PEVN E K+ +G +IANPNC+
Sbjct: 73 ISRAKALVWAEGGALVVDNSSAWRYEPWVPLVVPEVNRE-----KIFQHRG-IIANPNCT 126
Query: 173 TIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTCKIFSQQ 232
T I MA PLHR + R++V+TYQ MEEL +T L G+ P + F+
Sbjct: 127 TAILAMALWPLHRAFQAKRVIVATYQAASGAGAKAMEELLTETHRFLHGEAPKAEAFAHP 186
Query: 233 YAFNLFSHNAPVLENGYNEEEMKMVKETRKI 263
FN+ H ENGY EEMK+V ET KI
Sbjct: 187 LPFNVIPHIDAFQENGYTREEMKVVWETHKI 217
>pdb|2GYY|A Chain A, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae
pdb|2GYY|B Chain B, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae
pdb|2GYY|C Chain C, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae
pdb|2GYY|D Chain D, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae
pdb|2GZ1|A Chain A, Structure Of Aspartate Semialdehyde Dehydrogenase (asadh)
From Streptococcus Pneumoniae Complexed With Nadp
pdb|2GZ1|B Chain B, Structure Of Aspartate Semialdehyde Dehydrogenase (asadh)
From Streptococcus Pneumoniae Complexed With Nadp
pdb|2GZ2|A Chain A, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With 2',5'-Adp
pdb|2GZ2|B Chain B, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With 2',5'-Adp
pdb|2GZ3|A Chain A, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With Nadp And
Aspartate- Semialdehyde
pdb|2GZ3|B Chain B, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With Nadp And
Aspartate- Semialdehyde
pdb|2GZ3|C Chain C, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With Nadp And
Aspartate- Semialdehyde
pdb|2GZ3|D Chain D, Structure Of Aspartate Semialdehyde Dehydrogenase (Asadh)
From Streptococcus Pneumoniae Complexed With Nadp And
Aspartate- Semialdehyde
pdb|3PWK|A Chain A, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
2',5'-Adenosine Diphosphate And D-2- Aminoadipate
pdb|3PWK|B Chain B, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
2',5'-Adenosine Diphosphate And D-2- Aminoadipate
pdb|3PWS|A Chain A, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
2',5'-Adenosine Diphosphate And D-2- Aminoadipate
pdb|3PWS|B Chain B, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
2',5'-Adenosine Diphosphate And D-2- Aminoadipate
pdb|3PYL|A Chain A, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
D-2,3-Diaminopropionate
pdb|3PYL|B Chain B, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
D-2,3-Diaminopropionate
pdb|3PYL|C Chain C, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
D-2,3-Diaminopropionate
pdb|3PYL|D Chain D, Crystal Structure Of Aspartate Beta-Semialdehide
Dehydrogenase From Streptococcus Pneumoniae With
D-2,3-Diaminopropionate
pdb|3PYX|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase Complex With Nadp And 2-Aminoterephthalate
pdb|3PYX|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase Complex With Nadp And 2-Aminoterephthalate
pdb|3PZB|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase Complex With Nadp And
D-2,3-Diaminopropionate
pdb|3PZB|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase Complex With Nadp And
D-2,3-Diaminopropionate
pdb|3Q11|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With Nadp
And Aspartyl Beta- Difluorophosphonate
pdb|3Q11|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With Nadp
And Aspartyl Beta- Difluorophosphonate
pdb|3Q1L|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With
Cysteamine Bound Covalently To Cys 128
pdb|3Q1L|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With
Cysteamine Bound Covalently To Cys 128
pdb|3Q1L|C Chain C, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With
Cysteamine Bound Covalently To Cys 128
pdb|3Q1L|D Chain D, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Streptococcus Pneumoniae With
Cysteamine Bound Covalently To Cys 128
Length = 366
Score = 162 bits (409), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 91/221 (41%), Positives = 125/221 (56%), Gaps = 17/221 (7%)
Query: 54 EFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSI 113
+ + +L + P I+ LAS RSAGK L F+D+ T+EE TE +F+GVDIALFSAG S
Sbjct: 17 QMIKMLEESTLPIDKIRYLASARSAGKSLKFKDQDITIEETTETAFEGVDIALFSAGSST 76
Query: 114 SKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCST 173
S K+ P AV+ G +VVDN+S FR +VPLV+PEVN A+ +IA PNCST
Sbjct: 77 SAKYAPYAVKAGVVVVDNTSYFRQNPDVPLVVPEVNAHALD------AHNGIIACPNCST 130
Query: 174 IICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTCKIFSQ-- 231
I ++A P+ ++ + R++VSTYQ + E + + REVL C + ++
Sbjct: 131 IQMMVALEPVRQKWGLDRIIVSTYQAVSGAGMGAILETQRELREVLNDGVKPCDLHAEIL 190
Query: 232 -------QY--AFNLFSHNAPVLENGYNEEEMKMVKETRKI 263
Y AFN +N Y EEMKM KET+KI
Sbjct: 191 PSGGDKKHYPIAFNALPQIDVFTDNDYTYEEMKMTKETKKI 231
>pdb|3VOS|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Glycerol And Sulfate From Mycobacterium
Tuberculosis H37rv
Length = 362
Score = 121 bits (304), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 17/224 (7%)
Query: 53 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGS 112
Q ++L +RDFP +++ AS RS G++L+F+ + VE+ G+DIALFSAG +
Sbjct: 33 QVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSA 92
Query: 113 ISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCS 172
+SK P G V+DNSSA+R +VPLV+ EVN E + + KG +IANPNC+
Sbjct: 93 MSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRP---KG-IIANPNCT 148
Query: 173 TIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEGKP--------- 223
T+ + LH A++ R+VVS+YQ + EL Q R V+ G
Sbjct: 149 TMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGAL 208
Query: 224 --PTCKIFSQQYAFNLFSHNAPVLENGYNE--EEMKMVKETRKI 263
P + AFN+ ++++G E E+ K+ E+RKI
Sbjct: 209 EFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKI 252
>pdb|3TZ6|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
Complexed With Inhibitor Smcs (Cys) And Phosphate From
Mycobacterium Tuberculosis H37rv
Length = 344
Score = 121 bits (303), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 79/224 (35%), Positives = 119/224 (53%), Gaps = 17/224 (7%)
Query: 53 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGS 112
Q ++L +RDFP +++ AS RS G++L+F+ + VE+ G+DIALFSAG +
Sbjct: 15 QVMRTLLDERDFPASAVRFFASARSQGRKLAFRGQEIEVEDAETADPSGLDIALFSAGSA 74
Query: 113 ISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCS 172
+SK P G V+DNSSA+R +VPLV+ EVN E + + KG +IANPNC+
Sbjct: 75 MSKVQAPRFAAAGVTVIDNSSAWRKDPDVPLVVSEVNFERDAHRRP---KG-IIANPNCT 130
Query: 173 TIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEGKP--------- 223
T+ + LH A++ R+VVS+YQ + EL Q R V+ G
Sbjct: 131 TMAAMPVLKVLHDEARLVRLVVSSYQAVSGSGLAGVAELAEQARAVIGGAEQLVYDGGAL 190
Query: 224 --PTCKIFSQQYAFNLFSHNAPVLENGYNE--EEMKMVKETRKI 263
P + AFN+ ++++G E E+ K+ E+RKI
Sbjct: 191 EFPPPNTYVAPIAFNVVPLAGSLVDDGSGETDEDQKLRFESRKI 234
>pdb|1YS4|A Chain A, Structure Of Aspartate-Semialdehyde Dehydrogenase From
Methanococcus Jannaschii
pdb|1YS4|B Chain B, Structure Of Aspartate-Semialdehyde Dehydrogenase From
Methanococcus Jannaschii
Length = 354
Score = 81.3 bits (199), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/166 (32%), Positives = 88/166 (53%), Gaps = 23/166 (13%)
Query: 53 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLS-----FQDKAYTVEELTED---------- 97
Q F+ +L+D + + AS+RSAGK+ FQD+ + E +D
Sbjct: 22 QRFVQLLADHPX-FELTALAASERSAGKKYKDACYWFQDR--DIPENIKDXVVIPTDPKH 78
Query: 98 -SFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGI 156
F+ VDI + ++KKF P ++G ++ N+SA+R E+VPLVIPEVN + + I
Sbjct: 79 EEFEDVDIVFSALPSDLAKKFEPEFAKEGKLIFSNASAYRXEEDVPLVIPEVNADHLELI 138
Query: 157 KVGMGK----GALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQ 198
++ K GA+I NPNCSTI ++ P+ + + + ++T Q
Sbjct: 139 EIQREKRGWDGAIITNPNCSTICAVITLKPIXDKFGLEAVFIATXQ 184
>pdb|2HJS|A Chain A, The Structure Of A Probable Aspartate-Semialdehyde
Dehydrogenase From Pseudomonas Aeruginosa
Length = 340
Score = 67.4 bits (163), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 94/217 (43%), Gaps = 17/217 (7%)
Query: 53 QEFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGS 112
+ + +L +RDFP + +LAS SAG++ F + + V ++ F V +A F+A
Sbjct: 20 EALVGLLDERDFPLHRLHLLASAESAGQRXGFAESSLRVGDVDSFDFSSVGLAFFAAAAE 79
Query: 113 ISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCS 172
+S+ A G V+D S A P V P V + V + A A P
Sbjct: 80 VSRAHAERARAAGCSVIDLSGALE-----PSVAPPVX------VSVNAERLASQAAPFLL 128
Query: 173 TIICLMAA------TPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQTREVLEGKPPTC 226
+ C +AA PL ++ ++ ++EL QT E+L +P
Sbjct: 129 SSPCAVAAELCEVLAPLLATLDCRQLNLTACLSVSSLGREGVKELARQTAELLNARPLEP 188
Query: 227 KIFSQQYAFNLFSHNAPVLENGYNEEEMKMVKETRKI 263
++F +Q AFNL + V G++ E ++ E + +
Sbjct: 189 RLFDRQIAFNLLAQVGAVDAEGHSAIERRIFAEVQAL 225
>pdb|2EP5|A Chain A, Structural Study Of Project Id St1242 From Sulfolobus
Tokodaii Strain7
pdb|2EP5|B Chain B, Structural Study Of Project Id St1242 From Sulfolobus
Tokodaii Strain7
pdb|2EP5|C Chain C, Structural Study Of Project Id St1242 From Sulfolobus
Tokodaii Strain7
pdb|2EP5|D Chain D, Structural Study Of Project Id St1242 From Sulfolobus
Tokodaii Strain7
Length = 350
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 5/107 (4%)
Query: 96 EDSFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSG 155
ED D VD+ L + +++ V+ G IVV N+S FRM +VPL+ PE+N E +
Sbjct: 73 EDHKD-VDVVLSALPNELAESIELELVKNGKIVVSNASPFRMDPDVPLINPEINWEHLEL 131
Query: 156 IKVGM----GKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQ 198
+K KG L+ NPNC+ I M PL A ++++++T Q
Sbjct: 132 LKFQKERKGWKGILVKNPNCTAAIMSMPIKPLIEIATKSKIIITTLQ 178
>pdb|1NWC|A Chain A, Crystal Structure Of Aspartate-Semialdehyde Dehydrogenase
From Haemophilus Influenzae
pdb|1NWC|B Chain B, Crystal Structure Of Aspartate-Semialdehyde Dehydrogenase
From Haemophilus Influenzae
pdb|1TA4|A Chain A, Crystal Structure Of Aspartate-Semialdehyde Dehydrogenase
From Haemophilus Influenzae With A Bound Arsenate
pdb|1TB4|A Chain A, Crystal Structure Of Aspartate-Semialdehyde Dehydrogenase
From Haemophilus Influenzae With A Bound Periodate
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 78 AGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKG--SIVVDNSSAF 135
GK A+ +EEL + +DI + GG + + P G VD +SA
Sbjct: 48 GGKDAGDLKSAFDIEELKK-----LDIIVTCQGGDYTNEVYPKLKATGWDGYWVDAASAL 102
Query: 136 RMVENVPLVIPEVNPEAMS-GIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVV 194
RM ++ +V+ VN +S G+K G+ NC+ + LMA L + V + V
Sbjct: 103 RMKDDAIIVLDPVNQHVISEGLKKGI---KTFVGGNCTVSLMLMAIGGLFEKDLVEWISV 159
Query: 195 STYQXXXXXXXXXMEEL 211
+TYQ M EL
Sbjct: 160 ATYQAASGAGAKNMREL 176
>pdb|1PS8|A Chain A, Crystal Structure Of The R270k Mutant Of Aspartate
Semialdehyde Dehydrogenase From Haemophilus Influenzae
Length = 371
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 78 AGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKG--SIVVDNSSAF 135
GK A+ +EEL + +DI + GG + + P G VD +SA
Sbjct: 48 GGKDAGDLKSAFDIEELKK-----LDIIVTCQGGDYTNEVYPKLKATGWDGYWVDAASAL 102
Query: 136 RMVENVPLVIPEVNPEAMS-GIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVV 194
RM ++ +V+ VN +S G+K G+ NC+ + LMA L + V + V
Sbjct: 103 RMKDDAIIVLDPVNQHVISEGLKKGI---KTFVGGNCTVSLMLMAIGGLFEKDLVEWISV 159
Query: 195 STYQXXXXXXXXXMEEL 211
+TYQ M EL
Sbjct: 160 ATYQAASGAGAKNMREL 176
>pdb|1PQU|A Chain A, Crystal Structure Of The H277n Mutant Of Aspartate
Semialdehyde Dehydrogenase From Haemophilus Influenzae
Bound With Nadp, S-Methyl Cysteine Sulfoxide And
Cacodylate
pdb|1PQU|B Chain B, Crystal Structure Of The H277n Mutant Of Aspartate
Semialdehyde Dehydrogenase From Haemophilus Influenzae
Bound With Nadp, S-Methyl Cysteine Sulfoxide And
Cacodylate
pdb|1PQU|C Chain C, Crystal Structure Of The H277n Mutant Of Aspartate
Semialdehyde Dehydrogenase From Haemophilus Influenzae
Bound With Nadp, S-Methyl Cysteine Sulfoxide And
Cacodylate
pdb|1PQU|D Chain D, Crystal Structure Of The H277n Mutant Of Aspartate
Semialdehyde Dehydrogenase From Haemophilus Influenzae
Bound With Nadp, S-Methyl Cysteine Sulfoxide And
Cacodylate
Length = 371
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 78 AGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKG--SIVVDNSSAF 135
GK A+ +EEL + +DI + GG + + P G VD +SA
Sbjct: 48 GGKDAGDLKSAFDIEELKK-----LDIIVTCQGGDYTNEVYPKLKATGWDGYWVDAASAL 102
Query: 136 RMVENVPLVIPEVNPEAMS-GIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVV 194
RM ++ +V+ VN +S G+K G+ NC+ + LMA L + V + V
Sbjct: 103 RMKDDAIIVLDPVNQHVISEGLKKGI---KTFVGGNCTVSLMLMAIGGLFEKDLVEWISV 159
Query: 195 STYQXXXXXXXXXMEEL 211
+TYQ M EL
Sbjct: 160 ATYQAASGAGAKNMREL 176
>pdb|3HSK|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
With Nadp From Candida Albicans
pdb|3HSK|B Chain B, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
With Nadp From Candida Albicans
Length = 381
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 75/179 (41%), Gaps = 44/179 (24%)
Query: 53 QEFLSVLSDRDFPYRSIKML-ASKRSAGKQLSFQDKAY-----TVEELTED--------- 97
Q F+ +LS P I L AS RSAGK+ ++D A T+ E +D
Sbjct: 33 QRFILLLSKH--PEFEIHALGASSRSAGKK--YKDAASWKQTETLPETEQDIVVQECKPE 88
Query: 98 --------SFDGVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVN 149
F G+D G I K F VE G VV N+ +R ++VPLV+P VN
Sbjct: 89 GNFLECDVVFSGLDA---DVAGDIEKSF----VEAGLAVVSNAKNYRREKDVPLVVPIVN 141
Query: 150 PEAMSGI---------KVGMGKGALIANPNCSTIICLMAATPLHRR-AKVTRMVVSTYQ 198
PE + + K G G +I NCST + PL + + + +T Q
Sbjct: 142 PEHIDVVENKVKQAVSKGGKKPGFIICISNCSTAGLVAPLKPLVEKFGPIDALTTTTLQ 200
>pdb|1PR3|A Chain A, Crystal Structure Of The R103k Mutant Of Aspartate
Semialdehyde Dehydrogenase From Haemophilus Influenzae
Length = 371
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 59/137 (43%), Gaps = 11/137 (8%)
Query: 78 AGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKG--SIVVDNSSAF 135
GK A+ +EEL + +DI + GG + + P G VD +SA
Sbjct: 48 GGKDAGDLKSAFDIEELKK-----LDIIVTCQGGDYTNEVYPKLKATGWDGYWVDAASAL 102
Query: 136 RMVENVPLVIPEVNPEAMS-GIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVV 194
+M ++ +V+ VN +S G+K G+ NC+ + LMA L + V + V
Sbjct: 103 KMKDDAIIVLDPVNQHVISEGLKKGI---KTFVGGNCTVSLMLMAIGGLFEKDLVEWISV 159
Query: 195 STYQXXXXXXXXXMEEL 211
+TYQ M EL
Sbjct: 160 ATYQAASGAGAKNMREL 176
>pdb|1OZA|A Chain A, Crystal Structure Of The R103l Mutant Of Aspartate
Semialdehyde Dehydrogenase From Haemophilus Influenzae
Length = 371
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 58/137 (42%), Gaps = 11/137 (8%)
Query: 78 AGKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKG--SIVVDNSSAF 135
GK A+ +EEL + +DI + GG + + P G VD +SA
Sbjct: 48 GGKDAGDLKSAFDIEELKK-----LDIIVTCQGGDYTNEVYPKLKATGWDGYWVDAASAL 102
Query: 136 RMVENVPLVIPEVNPEAMS-GIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVV 194
M ++ +V+ VN +S G+K G+ NC+ + LMA L + V + V
Sbjct: 103 LMKDDAIIVLDPVNQHVISEGLKKGI---KTFVGGNCTVSLMLMAIGGLFEKDLVEWISV 159
Query: 195 STYQXXXXXXXXXMEEL 211
+TYQ M EL
Sbjct: 160 ATYQAASGAGAKNMREL 176
>pdb|4DPK|A Chain A, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota
pdb|4DPK|B Chain B, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota
pdb|4DPK|C Chain C, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota
pdb|4DPK|D Chain D, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota
pdb|4DPM|A Chain A, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|B Chain B, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|C Chain C, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|D Chain D, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|E Chain E, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPM|F Chain F, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Coa
pdb|4DPL|A Chain A, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Nadp
pdb|4DPL|B Chain B, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Nadp
pdb|4DPL|C Chain C, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Nadp
pdb|4DPL|D Chain D, Structure Of Malonyl-coenzyme A Reductase From
Crenarchaeota In Complex With Nadp
Length = 359
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 69/151 (45%), Gaps = 31/151 (20%)
Query: 54 EFLSVLSDRDFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTEDS------------FDG 101
E++ +LS+ PY LA K S GK + TV ++ ++ D
Sbjct: 22 EYVRMLSNH--PYIKPAYLAGKGSVGKPYGEVVRWQTVGQVPKEIADMEIKPTDPKLMDD 79
Query: 102 VDIALFS-----AGGSISKKFGPIAVEKGSIVVDNSSAFRMVENVPLVIPEVNPEAMSGI 156
VDI +FS A G + ++F ++G V+ NS R +VPL++PE+NP +S I
Sbjct: 80 VDI-IFSPLPQGAAGPVEEQFA----KEGFPVISNSPDHRFDPDVPLLVPELNPHTISLI 134
Query: 157 ----KVGMGKGALIANPNCSTIICLMAATPL 183
K KG ++ P C+ AA PL
Sbjct: 135 DEQRKRREWKGFIVTTPLCT---AQGAAIPL 162
>pdb|1MC4|A Chain A, Crystal Structure Of Aspartate-Semialdehyde Dehydrogenase
From Vibrio Cholerae El Tor
pdb|3PZR|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Vibrio Cholerae With Nadp And Product
Of S-Carbamoyl-L-Cysteine
pdb|3PZR|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Vibrio Cholerae With Nadp And Product
Of S-Carbamoyl-L-Cysteine
pdb|3Q0E|A Chain A, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Vibrio Cholerae With Product Of
S-Allyl-L-Cysteine Sulfoxide
pdb|3Q0E|B Chain B, Crystals Structure Of Aspartate Beta-Semialdehyde
Dehydrogenase From Vibrio Cholerae With Product Of
S-Allyl-L-Cysteine Sulfoxide
pdb|1MB4|A Chain A, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Vibrio Cholerae With Nadp And S-methyl-l-cysteine
Sulfoxide
pdb|1MB4|B Chain B, Crystal Structure Of Aspartate Semialdehyde Dehydrogenase
From Vibrio Cholerae With Nadp And S-methyl-l-cysteine
Sulfoxide
Length = 370
Score = 42.0 bits (97), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 54/136 (39%), Gaps = 11/136 (8%)
Query: 79 GKQLSFQDKAYTVEELTEDSFDGVDIALFSAGGSISKKFGPIAVEKG--SIVVDNSSAFR 136
GK A+ +E L + +D + GGS ++K P + G +D +S R
Sbjct: 47 GKDAGMLHDAFDIESLKQ-----LDAVITCQGGSYTEKVYPALRQAGWKGYWIDAASTLR 101
Query: 137 MVENVPLVIPEVN-PEAMSGIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVS 195
M + + + VN + + GI G NC+ + LMA L+ R V M
Sbjct: 102 MDKEAIITLDPVNLKQILHGIHHGT---KTFVGGNCTVSLMLMALGGLYERGLVEWMSAM 158
Query: 196 TYQXXXXXXXXXMEEL 211
TYQ M EL
Sbjct: 159 TYQAASGAGAQNMREL 174
>pdb|1BRM|A Chain A, Aspartate Beta-Semialdehyde Dehydrogenase From Escherichia
Coli
pdb|1BRM|B Chain B, Aspartate Beta-Semialdehyde Dehydrogenase From Escherichia
Coli
pdb|1BRM|C Chain C, Aspartate Beta-Semialdehyde Dehydrogenase From Escherichia
Coli
pdb|1GL3|B Chain B, Aspartate Beta-Semialdehyde Dehydrogenase In Complex With
Nadp And Substrate Analogue S-Methyl Cysteine Sulfoxide
pdb|1GL3|A Chain A, Aspartate Beta-Semialdehyde Dehydrogenase In Complex With
Nadp And Substrate Analogue S-Methyl Cysteine Sulfoxide
Length = 367
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 36/201 (17%)
Query: 96 EDSFD-----GVDIALFSAGGSISKKFGPIAVEKG--SIVVDNSSAFRMVENVPLVIPEV 148
+D+FD +DI + GG + + P E G +D +S+ RM ++ +++ V
Sbjct: 55 QDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPV 114
Query: 149 NPEAMS-GIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXX 207
N + ++ G+ G+ NC+ + LM+ L V + V+TYQ
Sbjct: 115 NQDVITDGLNNGI---RTFVGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARH 171
Query: 208 MEELELQTREVL-----EGKPPTCKIFSQQYAFNLFSHNA--PV---------------- 244
M EL Q + E P+ I + + + PV
Sbjct: 172 MRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNFGVPLAGSLIPWID 231
Query: 245 --LENGYNEEEMKMVKETRKI 263
L+NG + EE K ET KI
Sbjct: 232 KQLDNGQSREEWKGQAETNKI 252
>pdb|1T4B|A Chain A, 1.6 Angstrom Structure Of Esherichia Coli Aspartate-
Semialdehyde Dehydrogenase.
pdb|1T4B|B Chain B, 1.6 Angstrom Structure Of Esherichia Coli Aspartate-
Semialdehyde Dehydrogenase.
pdb|1T4D|A Chain A, Crystal Structure Of Escherichia Coli Aspartate
Beta-Semialdehyde Dehydrogenase (Ecasadh), At 1.95
Angstrom Resolution
pdb|1T4D|B Chain B, Crystal Structure Of Escherichia Coli Aspartate
Beta-Semialdehyde Dehydrogenase (Ecasadh), At 1.95
Angstrom Resolution
pdb|1T4D|C Chain C, Crystal Structure Of Escherichia Coli Aspartate
Beta-Semialdehyde Dehydrogenase (Ecasadh), At 1.95
Angstrom Resolution
Length = 367
Score = 41.2 bits (95), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 78/201 (38%), Gaps = 36/201 (17%)
Query: 96 EDSFD-----GVDIALFSAGGSISKKFGPIAVEKG--SIVVDNSSAFRMVENVPLVIPEV 148
+D+FD +DI + GG + + P E G +D +S+ RM ++ +++ V
Sbjct: 55 QDAFDLEALKALDIIVTCQGGDYTNEIYPKLRESGWQGYWIDAASSLRMKDDAIIILDPV 114
Query: 149 NPEAMS-GIKVGMGKGALIANPNCSTIICLMAATPLHRRAKVTRMVVSTYQXXXXXXXXX 207
N + ++ G+ G+ NC+ + LM+ L V + V+TYQ
Sbjct: 115 NQDVITDGLNNGI---RTFVGGNCTVSLMLMSLGGLFANDLVDWVSVATYQAASGGGARH 171
Query: 208 MEELELQTREVL-----EGKPPTCKIFSQQYAFNLFSHNA--PV---------------- 244
M EL Q + E P+ I + + + PV
Sbjct: 172 MRELLTQMGHLYGHVADELATPSSAILDIERKVTTLTRSGELPVDNFGVPLAGSLIPWID 231
Query: 245 --LENGYNEEEMKMVKETRKI 263
L+NG + EE K ET KI
Sbjct: 232 KQLDNGQSREEWKGQAETNKI 252
>pdb|3UW3|A Chain A, Crystal Structure Of An Aspartate-Semialdehyde
Dehydrogenase From Burkholderia Thailandensis
pdb|3UW3|B Chain B, Crystal Structure Of An Aspartate-Semialdehyde
Dehydrogenase From Burkholderia Thailandensis
Length = 377
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 78/229 (34%), Gaps = 30/229 (13%)
Query: 63 DFPYRSIKMLASKRSAGKQLSFQDKAYTVEELTE-DSFDGVDIALFSAGGSISKKFGPIA 121
DF ++ + GK SF T+++ T D D+ + GG + P
Sbjct: 29 DFDLIEPVFFSTSNAGGKAPSFAKNETTLKDATSIDDLKKCDVIITCQGGDYTNDVFPKL 88
Query: 122 VEKG--SIVVDNSSAFRMVENVPLVIPEVNPEAMSGIKVGMGKGALIANPNCSTIICLMA 179
G +D +S+ RM ++ +++ VN + V K + NC+ + LMA
Sbjct: 89 RAAGWNGYWIDAASSLRMKDDAVIILDPVNLNVIKDALVNGTKNFI--GGNCTVSLMLMA 146
Query: 180 ATPLHRRAKVTRMVVSTYQXXXXXXXXXMEELELQ----------------------TRE 217
L R V M TYQ M EL Q R
Sbjct: 147 LGGLFRENLVDWMTAMTYQAASGAGAQNMRELLAQMGTLNGAVAAQLADPASAILDIDRR 206
Query: 218 VL---EGKPPTCKIFSQQYAFNLFSHNAPVLENGYNEEEMKMVKETRKI 263
VL G F A +L L NG + EE K ET KI
Sbjct: 207 VLAAMNGDAMPTSQFGVPLAGSLIPWIDKDLGNGMSREEWKGGAETNKI 255
>pdb|3DR3|A Chain A, Structure Of Idp00107, A Potential N-Acetyl-Gamma-
Glutamylphosphate Reductase From Shigella Flexneri
Length = 337
Score = 33.1 bits (74), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 38/95 (40%), Gaps = 12/95 (12%)
Query: 101 GVDIALFSAGGSISKKFGPIAVEKGSIVVDNSSAFRMVE--------NVPLVIPEVNPEA 152
GVD+ + +S P +E G +V D S AFR+ + PE+ +A
Sbjct: 75 GVDVVFLATAHEVSHDLAPQFLEAGCVVFDLSGAFRVNDATFYEKYYGFTHQYPELLEQA 134
Query: 153 MSGIKVGMG----KGALIANPNCSTIICLMAATPL 183
G+ G + LIA P C +A PL
Sbjct: 135 AYGLAEWCGNKLKEANLIAVPGCYPTAAQLALKPL 169
>pdb|1YA4|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA4|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 In
Complex With Tamoxifen
pdb|1YA8|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YA8|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Cleavage Products Of Mevastatin
pdb|1YAH|A Chain A, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|B Chain B, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAH|C Chain C, Crystal Structure Of Human Liver Carboxylesterase
Complexed To Etyl Acetate; A Fatty Acid Ethyl Ester
Analogue
pdb|1YAJ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|1YAJ|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Benzil
pdb|2HRQ|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|D Chain D, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|E Chain E, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRQ|F Chain F, Crystal Structure Of Human Liver Carboxylesterase 1 (hce1)
In Covalent Complex With The Nerve Agent Soman (gd)
pdb|2HRR|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|2HRR|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Tabun (Ga)
pdb|4AB1|A Chain A, Recombinant Human Carboxylesterase 1 From Whole Cabbage
Loopers
Length = 532
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 237 LFS-HNAPVLENGYNEEEMKMVKETRKIWVSFKMN 270
LFS AP L+ G +EEE+++ K K W +F N
Sbjct: 451 LFSVFGAPFLKEGASEEEIRLSKMVMKFWANFARN 485
>pdb|2DQY|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQY|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Cholate And Palmitate
pdb|2DQZ|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DQZ|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Homatropine, Coenzyme A, And Palmitate
pdb|2DR0|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2DR0|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Taurocholate
pdb|2H7C|A Chain A, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|B Chain B, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|C Chain C, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|D Chain D, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|E Chain E, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
pdb|2H7C|F Chain F, Crystal Structure Of Human Carboxylesterase In Complex
With Coenzyme A
Length = 542
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 237 LFS-HNAPVLENGYNEEEMKMVKETRKIWVSFKMN 270
LFS AP L+ G +EEE+++ K K W +F N
Sbjct: 453 LFSVFGAPFLKEGASEEEIRLSKMVMKFWANFARN 487
>pdb|3K9B|A Chain A, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|B Chain B, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
pdb|3K9B|C Chain C, Crystal Structure Of Human Liver Carboxylesterase 1 (Hce1)
In Covalent Complex With The Nerve Agent Cyclosarin (Gf)
Length = 529
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 237 LFS-HNAPVLENGYNEEEMKMVKETRKIWVSFKMN 270
LFS AP L+ G +EEE+++ K K W +F N
Sbjct: 448 LFSVFGAPFLKEGASEEEIRLSKMVMKFWANFARN 482
>pdb|1MX1|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX1|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complex With Tacrine
pdb|1MX5|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX5|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Homatropine, A Cocaine Analogue
pdb|1MX9|A Chain A, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|B Chain B, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|C Chain C, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|D Chain D, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|E Chain E, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|F Chain F, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|G Chain G, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|H Chain H, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|I Chain I, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|J Chain J, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|K Chain K, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
pdb|1MX9|L Chain L, Crystal Structure Of Human Liver Carboxylesterase In
Complexed With Naloxone Methiodide, A Heroin Analogue
Length = 548
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 237 LFS-HNAPVLENGYNEEEMKMVKETRKIWVSFKMN 270
LFS AP L+ G +EEE+++ K K W +F N
Sbjct: 453 LFSVFGAPFLKEGASEEEIRLSKMVMKFWANFARN 487
>pdb|1K4Y|A Chain A, Crystal Structure Of Rabbit Liver Carboxylesterase In
Complex With 4- Piperidino-Piperidine
Length = 534
Score = 30.0 bits (66), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 17/30 (56%)
Query: 241 NAPVLENGYNEEEMKMVKETRKIWVSFKMN 270
AP L+ G EEE+K+ K K W +F N
Sbjct: 454 GAPFLKEGATEEEIKLSKMVMKYWANFARN 483
>pdb|2RDN|A Chain A, Crystal Structure Of Ptlh With Akg And Ent-1pl Bound
pdb|2RDQ|A Chain A, Crystal Structure Of Ptlh With FeALPHA KETOGLUTARATE BOUND
pdb|2RDR|A Chain A, Crystal Structure Of Ptlh With Fe/oxalylglycine Bound
pdb|2RDS|A Chain A, Crystal Structure Of Ptlh With FeOXALYLGLYCINE AND ENT-1-
Deoxypentalenic Acid Bound
Length = 288
Score = 28.1 bits (61), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 5/50 (10%)
Query: 55 FLSVLSDRDFPYRSIKMLASKRSAGK-QLSFQDKAYTVEELTEDSFDGVD 103
FL + DRD +K +A + G L D T+EELT DSF+ VD
Sbjct: 35 FLRNVLDRDL----VKTVAEQMREGLVALGAADPHATLEELTIDSFESVD 80
>pdb|2WOO|A Chain A, Nucleotide-Free Form Of S. Pombe Get3
pdb|2WOO|B Chain B, Nucleotide-Free Form Of S. Pombe Get3
pdb|2WOO|C Chain C, Nucleotide-Free Form Of S. Pombe Get3
pdb|2WOO|D Chain D, Nucleotide-Free Form Of S. Pombe Get3
pdb|2WOO|E Chain E, Nucleotide-Free Form Of S. Pombe Get3
pdb|2WOO|F Chain F, Nucleotide-Free Form Of S. Pombe Get3
Length = 329
Score = 27.7 bits (60), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 17/70 (24%)
Query: 111 GSISKKFGPIAVEKGSIVVDNSSA---FRMVENVPLVIPEVNPEAMSGIKVGMGKGALIA 167
G +S +FGP+ + GSI+ N++ F +E++ I EVN +
Sbjct: 172 GGLSSRFGPMINQMGSIMGVNANEQDLFGKMESMRANISEVNKQ--------------FK 217
Query: 168 NPNCSTIICL 177
NP+ +T +C+
Sbjct: 218 NPDLTTFVCV 227
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.130 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,068,071
Number of Sequences: 62578
Number of extensions: 249567
Number of successful extensions: 579
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 547
Number of HSP's gapped (non-prelim): 39
length of query: 279
length of database: 14,973,337
effective HSP length: 98
effective length of query: 181
effective length of database: 8,840,693
effective search space: 1600165433
effective search space used: 1600165433
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 51 (24.3 bits)