Query 023683
Match_columns 279
No_of_seqs 244 out of 1669
Neff 10.3
Searched_HMMs 46136
Date Fri Mar 29 05:52:19 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023683.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/023683hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02965 Probable pheophorbida 100.0 1.3E-28 2.7E-33 202.0 16.9 219 2-279 23-250 (255)
2 PRK03592 haloalkane dehalogena 100.0 1.3E-28 2.8E-33 206.2 16.7 220 2-279 47-286 (295)
3 PLN02824 hydrolase, alpha/beta 100.0 6.4E-28 1.4E-32 201.9 19.0 223 2-279 49-291 (294)
4 PRK00870 haloalkane dehalogena 100.0 4.3E-28 9.2E-33 203.7 17.5 221 2-279 66-298 (302)
5 KOG4178 Soluble epoxide hydrol 100.0 7E-28 1.5E-32 194.7 15.9 220 2-279 64-317 (322)
6 TIGR02240 PHA_depoly_arom poly 100.0 7.5E-28 1.6E-32 199.7 16.0 212 2-279 45-263 (276)
7 PRK03204 haloalkane dehalogena 100.0 4.4E-27 9.5E-32 195.8 17.2 221 2-279 54-285 (286)
8 PLN02578 hydrolase 99.9 3E-26 6.5E-31 196.3 19.9 220 2-279 106-352 (354)
9 TIGR03343 biphenyl_bphD 2-hydr 99.9 2.6E-26 5.7E-31 190.9 18.7 217 4-279 55-280 (282)
10 PRK10673 acyl-CoA esterase; Pr 99.9 4.4E-26 9.5E-31 186.8 18.4 207 3-279 37-252 (255)
11 PLN02679 hydrolase, alpha/beta 99.9 2.8E-26 6E-31 196.8 17.6 217 2-279 108-354 (360)
12 PRK10349 carboxylesterase BioH 99.9 5.9E-26 1.3E-30 186.3 17.5 210 2-278 33-252 (256)
13 PRK07581 hypothetical protein; 99.9 2.1E-25 4.5E-30 190.4 16.9 187 92-279 105-333 (339)
14 PLN03084 alpha/beta hydrolase 99.9 4.8E-25 1E-29 188.9 18.5 223 2-279 147-381 (383)
15 PLN03087 BODYGUARD 1 domain co 99.9 7.1E-25 1.5E-29 191.5 18.9 216 8-279 231-476 (481)
16 PRK11126 2-succinyl-6-hydroxy- 99.9 1.3E-24 2.9E-29 176.7 19.1 184 88-279 48-239 (242)
17 PF12697 Abhydrolase_6: Alpha/ 99.9 1.2E-25 2.7E-30 179.6 12.7 209 2-274 18-228 (228)
18 TIGR03056 bchO_mg_che_rel puta 99.9 1.7E-24 3.7E-29 179.4 19.5 216 2-279 48-277 (278)
19 PRK06489 hypothetical protein; 99.9 1.1E-24 2.3E-29 187.2 17.7 188 87-279 133-354 (360)
20 PRK08775 homoserine O-acetyltr 99.9 1.3E-24 2.7E-29 185.6 16.8 187 87-279 118-336 (343)
21 KOG4409 Predicted hydrolase/ac 99.9 2.1E-24 4.6E-29 175.2 16.7 219 3-279 111-361 (365)
22 TIGR03611 RutD pyrimidine util 99.9 1.6E-24 3.4E-29 177.1 15.6 215 3-279 34-255 (257)
23 PLN02385 hydrolase; alpha/beta 99.9 7.2E-25 1.6E-29 187.6 13.7 212 2-279 108-342 (349)
24 TIGR01738 bioH putative pimelo 99.9 4.3E-24 9.4E-29 172.9 16.7 211 2-279 24-245 (245)
25 PLN02211 methyl indole-3-aceta 99.9 1.8E-23 3.8E-28 172.8 18.6 217 2-278 38-266 (273)
26 TIGR03695 menH_SHCHC 2-succiny 99.9 3.1E-23 6.7E-28 168.1 18.6 219 2-279 21-250 (251)
27 TIGR01250 pro_imino_pep_2 prol 99.9 3.6E-23 7.7E-28 171.7 19.2 217 4-279 48-287 (288)
28 TIGR02427 protocat_pcaD 3-oxoa 99.9 1.2E-23 2.6E-28 170.8 15.3 211 3-279 34-250 (251)
29 TIGR01392 homoserO_Ac_trn homo 99.9 1.6E-23 3.4E-28 179.5 16.7 192 87-279 107-350 (351)
30 PHA02857 monoglyceride lipase; 99.9 1.2E-23 2.6E-28 174.4 14.7 212 2-279 45-270 (276)
31 KOG1454 Predicted hydrolase/ac 99.9 4.7E-23 1E-27 172.9 14.6 191 87-279 109-321 (326)
32 PRK10749 lysophospholipase L2; 99.9 4.8E-23 1E-27 175.0 13.7 223 2-279 74-326 (330)
33 PLN02298 hydrolase, alpha/beta 99.9 6.8E-23 1.5E-27 174.3 13.6 206 3-279 81-314 (330)
34 PRK00175 metX homoserine O-ace 99.9 2.4E-22 5.1E-27 173.6 16.2 192 87-279 127-371 (379)
35 PF00561 Abhydrolase_1: alpha/ 99.9 4.3E-23 9.3E-28 166.0 10.8 192 86-277 24-230 (230)
36 PLN02894 hydrolase, alpha/beta 99.9 1.3E-21 2.9E-26 169.8 19.6 188 90-279 160-382 (402)
37 PRK14875 acetoin dehydrogenase 99.9 5.3E-21 1.1E-25 165.2 16.6 186 87-279 178-368 (371)
38 PLN02980 2-oxoglutarate decarb 99.9 4E-21 8.8E-26 190.2 17.4 190 87-279 1426-1636(1655)
39 TIGR01249 pro_imino_pep_1 prol 99.9 1.4E-20 3.1E-25 158.3 17.3 191 87-279 76-306 (306)
40 COG2267 PldB Lysophospholipase 99.9 5.5E-21 1.2E-25 158.9 13.7 216 2-279 54-291 (298)
41 PRK06765 homoserine O-acetyltr 99.9 3.7E-20 8E-25 159.1 18.8 192 87-279 141-385 (389)
42 PLN02652 hydrolase; alpha/beta 99.8 1.8E-20 4E-25 161.6 14.6 205 2-279 156-384 (395)
43 PRK05855 short chain dehydroge 99.8 9.5E-20 2.1E-24 166.3 14.6 59 221-279 231-289 (582)
44 PLN02511 hydrolase 99.8 1.6E-20 3.5E-25 162.4 8.5 61 219-279 294-362 (388)
45 TIGR03100 hydr1_PEP hydrolase, 99.8 1.8E-19 3.9E-24 149.0 13.8 203 2-279 50-272 (274)
46 KOG2382 Predicted alpha/beta h 99.8 1.9E-18 4.2E-23 140.2 18.0 186 87-279 100-310 (315)
47 KOG2984 Predicted hydrolase [G 99.8 8.1E-20 1.8E-24 137.0 8.4 173 89-279 97-273 (277)
48 TIGR01607 PST-A Plasmodium sub 99.8 1.5E-18 3.2E-23 147.2 15.6 211 2-279 67-330 (332)
49 PRK05077 frsA fermentation/res 99.8 9.9E-18 2.1E-22 145.8 18.5 190 2-279 215-409 (414)
50 KOG1455 Lysophospholipase [Lip 99.8 2E-18 4.4E-23 138.0 12.2 211 2-279 75-309 (313)
51 TIGR01838 PHA_synth_I poly(R)- 99.8 2.5E-17 5.3E-22 145.7 19.6 212 2-269 213-462 (532)
52 TIGR01836 PHA_synth_III_C poly 99.8 1.7E-17 3.8E-22 142.1 17.4 222 2-279 87-347 (350)
53 COG1647 Esterase/lipase [Gener 99.8 2.4E-17 5.2E-22 125.8 13.9 198 2-279 35-241 (243)
54 PRK10985 putative hydrolase; P 99.8 9.1E-18 2E-22 142.3 12.5 206 2-267 80-300 (324)
55 COG0596 MhpC Predicted hydrola 99.7 5.9E-16 1.3E-20 125.8 15.1 190 89-278 71-278 (282)
56 KOG2931 Differentiation-relate 99.6 4.2E-14 9.1E-19 112.5 19.0 189 88-279 104-303 (326)
57 PF03096 Ndr: Ndr family; Int 99.6 1.2E-14 2.5E-19 117.2 14.5 186 88-279 81-276 (283)
58 PRK13604 luxD acyl transferase 99.6 1.1E-14 2.4E-19 119.6 14.2 44 221-264 200-246 (307)
59 PLN02872 triacylglycerol lipas 99.6 1.1E-14 2.5E-19 125.3 14.4 57 223-279 325-386 (395)
60 COG2021 MET2 Homoserine acetyl 99.6 6E-14 1.3E-18 115.9 16.4 193 87-279 127-365 (368)
61 PRK07868 acyl-CoA synthetase; 99.6 5.6E-14 1.2E-18 135.2 15.0 190 88-279 120-358 (994)
62 TIGR03101 hydr2_PEP hydrolase, 99.6 1.5E-14 3.3E-19 117.9 9.3 85 2-143 49-136 (266)
63 PRK11071 esterase YqiA; Provis 99.5 1.2E-13 2.7E-18 107.7 13.2 141 92-279 47-188 (190)
64 COG3208 GrsT Predicted thioest 99.5 1.9E-13 4.1E-18 106.9 14.0 171 88-278 55-232 (244)
65 KOG2564 Predicted acetyltransf 99.5 7.8E-15 1.7E-19 115.8 5.7 53 87-140 124-181 (343)
66 PRK10566 esterase; Provisional 99.5 6.8E-13 1.5E-17 108.3 15.3 50 89-138 88-139 (249)
67 PF00326 Peptidase_S9: Prolyl 99.5 5.5E-13 1.2E-17 106.3 13.8 55 88-142 44-100 (213)
68 PF06342 DUF1057: Alpha/beta h 99.5 9.7E-12 2.1E-16 99.3 18.2 83 1-141 54-137 (297)
69 PF12695 Abhydrolase_5: Alpha/ 99.4 7.7E-13 1.7E-17 98.6 10.2 125 2-262 19-145 (145)
70 KOG1552 Predicted alpha/beta h 99.4 3.9E-12 8.5E-17 100.2 11.2 121 101-277 124-247 (258)
71 TIGR01839 PHA_synth_II poly(R) 99.4 1.1E-11 2.5E-16 109.1 15.0 83 1-143 239-330 (560)
72 KOG4667 Predicted esterase [Li 99.3 2.2E-11 4.8E-16 92.9 10.3 186 2-267 55-244 (269)
73 TIGR03230 lipo_lipase lipoprot 99.3 1.3E-11 2.8E-16 106.7 9.0 53 90-142 97-155 (442)
74 PF00975 Thioesterase: Thioest 99.2 7.1E-10 1.5E-14 89.3 13.9 56 88-143 47-106 (229)
75 PLN02442 S-formylglutathione h 99.2 7.4E-10 1.6E-14 92.1 14.2 55 88-142 125-179 (283)
76 COG0429 Predicted hydrolase of 99.2 5.9E-10 1.3E-14 91.1 12.2 48 219-266 270-319 (345)
77 KOG1838 Alpha/beta hydrolase [ 99.1 5.8E-10 1.3E-14 94.2 12.0 205 3-267 148-368 (409)
78 cd00707 Pancreat_lipase_like P 99.1 1E-10 2.2E-15 96.6 7.4 39 104-142 110-148 (275)
79 KOG2565 Predicted hydrolases o 99.1 3.4E-10 7.4E-15 93.2 9.0 56 87-142 210-265 (469)
80 TIGR00976 /NonD putative hydro 99.1 2.1E-10 4.7E-15 104.0 8.6 37 106-142 97-133 (550)
81 TIGR01849 PHB_depoly_PhaZ poly 99.1 5.4E-09 1.2E-13 89.7 15.9 56 87-143 150-210 (406)
82 TIGR01840 esterase_phb esteras 99.1 3.5E-09 7.6E-14 84.3 13.8 52 91-142 78-131 (212)
83 TIGR02821 fghA_ester_D S-formy 99.1 5.3E-09 1.2E-13 86.6 15.2 53 90-142 119-174 (275)
84 PF06500 DUF1100: Alpha/beta h 99.1 5.9E-09 1.3E-13 88.8 15.0 168 3-258 212-387 (411)
85 COG1506 DAP2 Dipeptidyl aminop 99.0 4.3E-09 9.4E-14 96.6 14.2 151 88-278 453-612 (620)
86 COG3243 PhaC Poly(3-hydroxyalk 99.0 6.9E-09 1.5E-13 87.4 13.5 55 87-141 162-217 (445)
87 PRK05371 x-prolyl-dipeptidyl a 99.0 6.8E-09 1.5E-13 96.8 14.3 37 105-141 337-373 (767)
88 KOG4391 Predicted alpha/beta h 99.0 6.4E-10 1.4E-14 85.2 5.9 118 103-265 146-266 (300)
89 COG2945 Predicted hydrolase of 99.0 6.9E-09 1.5E-13 78.2 11.2 55 223-279 149-204 (210)
90 PLN02733 phosphatidylcholine-s 99.0 6.8E-10 1.5E-14 96.7 6.6 87 1-143 113-203 (440)
91 COG4757 Predicted alpha/beta h 99.0 3.2E-09 6.9E-14 82.2 8.1 214 3-279 51-280 (281)
92 PRK10252 entF enterobactin syn 99.0 1E-08 2.2E-13 102.4 13.7 55 87-141 1113-1171(1296)
93 PLN00021 chlorophyllase 98.9 5E-09 1.1E-13 87.9 7.8 39 103-141 123-166 (313)
94 PF06057 VirJ: Bacterial virul 98.9 1.1E-08 2.3E-13 77.9 8.7 84 2-143 22-109 (192)
95 PRK11460 putative hydrolase; P 98.9 4.4E-08 9.5E-13 79.0 11.6 115 92-278 87-208 (232)
96 PF08538 DUF1749: Protein of u 98.8 2.2E-08 4.7E-13 82.0 9.5 58 88-145 86-152 (303)
97 PF10230 DUF2305: Uncharacteri 98.8 3.6E-07 7.8E-12 75.1 16.3 166 87-257 59-257 (266)
98 PF09752 DUF2048: Uncharacteri 98.8 1.7E-07 3.7E-12 78.0 13.5 173 96-277 165-344 (348)
99 TIGR03502 lipase_Pla1_cef extr 98.8 2.5E-08 5.4E-13 91.9 8.5 39 88-126 521-575 (792)
100 smart00824 PKS_TE Thioesterase 98.7 5.8E-07 1.3E-11 70.9 14.5 55 88-142 45-103 (212)
101 PF01738 DLH: Dienelactone hyd 98.7 1.1E-07 2.5E-12 75.9 10.3 47 90-137 76-128 (218)
102 PF02129 Peptidase_S15: X-Pro 98.7 4E-07 8.7E-12 75.3 13.1 83 5-142 53-137 (272)
103 PF06821 Ser_hydrolase: Serine 98.7 1.4E-07 3.1E-12 72.0 9.1 118 88-266 38-157 (171)
104 COG3319 Thioesterase domains o 98.6 1.2E-06 2.5E-11 71.0 13.6 55 88-142 46-104 (257)
105 PF05728 UPF0227: Uncharacteri 98.6 1.5E-06 3.3E-11 67.2 13.2 54 87-143 40-93 (187)
106 PRK10162 acetyl esterase; Prov 98.6 3.8E-06 8.3E-11 71.1 15.6 54 89-142 135-196 (318)
107 PF08840 BAAT_C: BAAT / Acyl-C 98.5 4E-07 8.7E-12 72.4 7.4 47 94-141 7-56 (213)
108 PF02230 Abhydrolase_2: Phosph 98.5 1.6E-06 3.4E-11 69.2 10.9 107 104-277 103-214 (216)
109 PF05448 AXE1: Acetyl xylan es 98.5 2.7E-06 5.9E-11 71.6 12.5 140 105-275 174-317 (320)
110 COG0400 Predicted esterase [Ge 98.5 1.7E-06 3.6E-11 67.9 10.5 122 87-278 78-205 (207)
111 PF12146 Hydrolase_4: Putative 98.4 2.4E-07 5.2E-12 61.1 3.9 25 1-25 35-59 (79)
112 KOG2624 Triglyceride lipase-ch 98.3 1.1E-05 2.3E-10 69.5 12.7 98 4-143 101-201 (403)
113 COG3545 Predicted esterase of 98.3 1.1E-05 2.3E-10 60.4 10.9 116 88-264 42-158 (181)
114 KOG1553 Predicted alpha/beta h 98.3 2.7E-06 5.8E-11 70.0 7.4 44 96-140 299-344 (517)
115 PF06028 DUF915: Alpha/beta hy 98.3 8.7E-06 1.9E-10 66.1 10.2 56 88-143 81-145 (255)
116 PRK10115 protease 2; Provision 98.3 4.1E-05 9E-10 71.3 15.9 55 88-142 504-560 (686)
117 COG0412 Dienelactone hydrolase 98.2 4.2E-05 9E-10 61.8 13.1 47 90-137 90-142 (236)
118 PF07859 Abhydrolase_3: alpha/ 98.2 1.6E-05 3.5E-10 63.0 10.5 53 89-141 49-110 (211)
119 COG3458 Acetyl esterase (deace 98.2 1.8E-05 4E-10 63.2 9.8 128 103-264 173-302 (321)
120 PF07819 PGAP1: PGAP1-like pro 98.2 1.4E-05 2.9E-10 64.1 9.3 52 92-143 66-125 (225)
121 PF12740 Chlorophyllase2: Chlo 98.2 5.6E-06 1.2E-10 66.7 6.7 38 104-141 89-131 (259)
122 PF03583 LIP: Secretory lipase 98.1 3.4E-05 7.4E-10 64.3 10.5 43 222-264 218-266 (290)
123 COG3571 Predicted hydrolase of 98.0 0.00018 3.8E-09 53.1 11.3 52 89-140 72-123 (213)
124 PF03959 FSH1: Serine hydrolas 98.0 2.9E-05 6.3E-10 61.8 7.4 114 88-269 85-208 (212)
125 PF02273 Acyl_transf_2: Acyl t 97.9 0.00015 3.3E-09 57.3 10.0 82 2-142 50-135 (294)
126 PF01674 Lipase_2: Lipase (cla 97.8 3.4E-05 7.4E-10 61.1 5.6 49 89-139 59-107 (219)
127 PTZ00472 serine carboxypeptida 97.8 7.6E-05 1.7E-09 66.3 8.2 56 88-143 146-218 (462)
128 PF00450 Peptidase_S10: Serine 97.8 0.00054 1.2E-08 60.2 13.5 57 223-279 330-413 (415)
129 cd00741 Lipase Lipase. Lipase 97.8 3.8E-05 8.3E-10 57.7 4.9 51 92-142 14-68 (153)
130 KOG2100 Dipeptidyl aminopeptid 97.7 0.001 2.2E-08 62.6 13.2 56 87-142 587-645 (755)
131 KOG2281 Dipeptidyl aminopeptid 97.6 0.00013 2.9E-09 64.9 6.7 52 88-139 706-760 (867)
132 PF12715 Abhydrolase_7: Abhydr 97.6 0.00029 6.4E-09 59.7 8.1 33 106-139 226-258 (390)
133 COG2936 Predicted acyl esteras 97.6 0.00077 1.7E-08 60.2 10.6 86 4-142 75-160 (563)
134 KOG4627 Kynurenine formamidase 97.6 0.00014 3.1E-09 55.9 4.9 131 88-267 117-252 (270)
135 PF07224 Chlorophyllase: Chlor 97.6 0.00018 4E-09 57.4 5.6 53 89-141 96-157 (307)
136 COG1075 LipA Predicted acetylt 97.5 0.00024 5.1E-09 60.6 6.7 55 88-142 109-165 (336)
137 COG4188 Predicted dienelactone 97.5 0.00011 2.4E-09 61.7 4.5 52 219-270 247-302 (365)
138 PF05990 DUF900: Alpha/beta hy 97.5 0.0003 6.4E-09 56.7 6.5 55 88-142 75-138 (233)
139 KOG1551 Uncharacterized conser 97.5 0.0025 5.3E-08 51.1 11.4 51 227-277 310-361 (371)
140 PF10503 Esterase_phd: Esteras 97.5 0.00069 1.5E-08 53.9 7.9 54 89-142 78-133 (220)
141 KOG1515 Arylacetamide deacetyl 97.5 0.007 1.5E-07 51.3 14.2 41 103-143 163-209 (336)
142 PF00151 Lipase: Lipase; Inte 97.4 0.00037 7.9E-09 59.1 6.6 39 104-142 148-188 (331)
143 PF11339 DUF3141: Protein of u 97.4 0.0026 5.6E-08 55.9 11.7 56 86-141 115-175 (581)
144 PF02450 LCAT: Lecithin:choles 97.4 0.00037 8E-09 60.7 6.5 53 91-143 101-162 (389)
145 COG0657 Aes Esterase/lipase [L 97.4 0.0087 1.9E-07 50.5 14.5 38 105-142 151-192 (312)
146 PF05677 DUF818: Chlamydia CHL 97.4 0.00052 1.1E-08 57.1 6.4 24 105-128 214-237 (365)
147 PF05577 Peptidase_S28: Serine 97.4 0.00059 1.3E-08 60.5 7.3 55 87-141 87-148 (434)
148 PF10142 PhoPQ_related: PhoPQ- 97.3 0.0057 1.2E-07 52.3 12.2 153 96-278 159-316 (367)
149 KOG3975 Uncharacterized conser 97.3 0.0084 1.8E-07 47.7 12.0 190 86-278 88-299 (301)
150 PF00756 Esterase: Putative es 97.3 0.0004 8.6E-09 56.6 4.9 54 90-143 96-152 (251)
151 PF01764 Lipase_3: Lipase (cla 97.3 0.00061 1.3E-08 50.2 5.2 38 89-126 47-84 (140)
152 PF04301 DUF452: Protein of un 97.3 0.0065 1.4E-07 47.9 11.0 40 104-145 55-94 (213)
153 PF08386 Abhydrolase_4: TAP-li 97.1 0.0014 2.9E-08 45.7 5.7 57 223-279 34-91 (103)
154 cd00519 Lipase_3 Lipase (class 97.1 0.00044 9.6E-09 55.7 3.4 50 91-140 113-167 (229)
155 PRK04940 hypothetical protein; 97.1 0.0016 3.6E-08 49.7 6.2 52 89-143 39-94 (180)
156 PRK10439 enterobactin/ferric e 97.1 0.0013 2.9E-08 57.5 6.5 53 89-141 266-323 (411)
157 PF11187 DUF2974: Protein of u 96.9 0.0026 5.6E-08 50.8 6.1 49 92-141 71-123 (224)
158 PLN02517 phosphatidylcholine-s 96.9 0.0016 3.5E-08 58.3 4.8 41 101-141 208-263 (642)
159 PF05057 DUF676: Putative seri 96.8 0.0022 4.8E-08 51.1 5.1 37 89-125 59-97 (217)
160 PLN02162 triacylglycerol lipas 96.7 0.0046 9.9E-08 54.0 6.2 38 88-125 260-297 (475)
161 COG4782 Uncharacterized protei 96.6 0.0044 9.5E-08 52.1 5.4 56 87-142 172-235 (377)
162 COG4814 Uncharacterized protei 96.6 0.0046 9.9E-08 49.3 5.0 55 88-142 114-177 (288)
163 KOG2551 Phospholipase/carboxyh 96.6 0.005 1.1E-07 48.2 5.2 58 219-278 159-216 (230)
164 PF05277 DUF726: Protein of un 96.5 0.011 2.5E-07 50.0 7.6 47 103-149 217-268 (345)
165 COG2819 Predicted hydrolase of 96.5 0.0055 1.2E-07 49.5 5.4 52 91-142 119-173 (264)
166 KOG3043 Predicted hydrolase re 96.5 0.022 4.7E-07 44.8 8.3 37 100-137 113-150 (242)
167 PLN00413 triacylglycerol lipas 96.4 0.0084 1.8E-07 52.5 6.4 37 89-125 267-303 (479)
168 KOG2369 Lecithin:cholesterol a 96.4 0.0023 5E-08 55.5 2.9 52 89-140 165-224 (473)
169 PLN02454 triacylglycerol lipas 96.4 0.0065 1.4E-07 52.5 5.6 37 90-126 210-248 (414)
170 COG3509 LpqC Poly(3-hydroxybut 96.4 0.017 3.6E-07 47.3 7.6 54 88-141 124-179 (312)
171 PF03403 PAF-AH_p_II: Platelet 96.4 0.0015 3.2E-08 56.6 1.6 39 103-142 225-263 (379)
172 PF06259 Abhydrolase_8: Alpha/ 96.3 0.015 3.3E-07 44.5 6.4 52 90-141 88-144 (177)
173 PLN02571 triacylglycerol lipas 96.3 0.0065 1.4E-07 52.5 4.6 38 89-126 207-246 (413)
174 PLN02408 phospholipase A1 96.0 0.011 2.4E-07 50.4 4.7 37 90-126 182-220 (365)
175 COG0627 Predicted esterase [Ge 96.0 0.011 2.3E-07 49.8 4.6 38 107-144 153-190 (316)
176 KOG2183 Prolylcarboxypeptidase 96.0 0.011 2.4E-07 50.5 4.6 52 89-140 148-201 (492)
177 KOG3724 Negative regulator of 95.9 0.0078 1.7E-07 55.4 3.8 34 107-140 183-219 (973)
178 PF10340 DUF2424: Protein of u 95.9 0.08 1.7E-06 45.4 9.4 56 89-144 178-238 (374)
179 COG4099 Predicted peptidase [G 95.9 0.021 4.6E-07 46.8 5.6 53 90-142 250-305 (387)
180 KOG4840 Predicted hydrolases o 95.8 0.0083 1.8E-07 46.9 2.8 55 88-142 85-145 (299)
181 PLN02934 triacylglycerol lipas 95.8 0.016 3.5E-07 51.2 4.9 37 89-125 304-340 (515)
182 PF05705 DUF829: Eukaryotic pr 95.7 0.55 1.2E-05 37.9 13.6 58 222-279 177-240 (240)
183 KOG3253 Predicted alpha/beta h 95.7 0.046 1E-06 49.1 7.4 45 222-266 303-349 (784)
184 PLN02310 triacylglycerol lipas 95.7 0.03 6.4E-07 48.4 6.0 36 90-125 189-228 (405)
185 KOG3101 Esterase D [General fu 95.6 0.0013 2.8E-08 50.9 -2.1 57 92-148 123-183 (283)
186 PF01083 Cutinase: Cutinase; 95.6 0.02 4.2E-07 44.2 4.2 54 89-142 64-123 (179)
187 PLN02324 triacylglycerol lipas 95.6 0.02 4.2E-07 49.6 4.6 37 90-126 197-235 (415)
188 COG3946 VirJ Type IV secretory 95.5 0.023 5.1E-07 48.4 4.9 41 89-129 305-349 (456)
189 PLN02802 triacylglycerol lipas 95.3 0.027 5.9E-07 49.8 4.6 37 90-126 312-350 (509)
190 PF11288 DUF3089: Protein of u 95.3 0.041 9E-07 43.1 5.1 40 88-127 76-116 (207)
191 PLN02753 triacylglycerol lipas 95.2 0.028 6.2E-07 49.9 4.5 37 89-125 290-331 (531)
192 COG3150 Predicted esterase [Ge 95.1 0.061 1.3E-06 40.3 5.3 52 88-142 41-92 (191)
193 PF07082 DUF1350: Protein of u 95.1 0.099 2.1E-06 42.0 6.8 35 107-141 91-125 (250)
194 PLN02719 triacylglycerol lipas 95.1 0.032 7E-07 49.4 4.5 37 89-125 276-317 (518)
195 PLN02847 triacylglycerol lipas 95.1 0.027 5.9E-07 50.7 4.0 31 96-126 241-271 (633)
196 PLN03037 lipase class 3 family 94.8 0.04 8.7E-07 48.9 4.4 36 90-125 298-337 (525)
197 PLN02761 lipase class 3 family 94.7 0.046 9.9E-07 48.6 4.5 36 90-125 272-313 (527)
198 PF12048 DUF3530: Protein of u 94.7 0.15 3.2E-06 43.1 7.4 46 98-143 185-231 (310)
199 PLN02633 palmitoyl protein thi 94.7 0.099 2.2E-06 43.5 6.0 52 89-141 75-131 (314)
200 KOG3847 Phospholipase A2 (plat 94.6 0.021 4.6E-07 47.1 1.9 37 105-142 240-276 (399)
201 COG1770 PtrB Protease II [Amin 94.4 0.58 1.3E-05 42.8 10.6 56 87-142 506-563 (682)
202 PLN02606 palmitoyl-protein thi 94.2 0.13 2.8E-06 42.7 5.8 53 89-142 76-133 (306)
203 KOG2182 Hydrolytic enzymes of 93.9 0.17 3.7E-06 44.5 6.2 55 87-141 146-207 (514)
204 PLN02213 sinapoylglucose-malat 93.9 0.29 6.3E-06 41.5 7.6 54 90-143 32-98 (319)
205 COG2382 Fes Enterochelin ester 93.8 0.052 1.1E-06 44.7 2.7 36 107-142 178-213 (299)
206 KOG4569 Predicted lipase [Lipi 93.6 0.11 2.3E-06 44.4 4.4 36 90-125 155-190 (336)
207 PF11144 DUF2920: Protein of u 93.3 0.21 4.6E-06 43.1 5.8 36 107-142 185-220 (403)
208 KOG3967 Uncharacterized conser 92.9 0.22 4.7E-06 39.0 4.6 42 99-140 183-226 (297)
209 PTZ00472 serine carboxypeptida 92.4 0.22 4.9E-06 44.5 4.9 29 251-279 427-456 (462)
210 PF02089 Palm_thioest: Palmito 92.4 0.48 1E-05 39.0 6.4 53 89-142 61-117 (279)
211 KOG4540 Putative lipase essent 91.8 0.45 9.8E-06 39.0 5.4 50 89-140 259-308 (425)
212 COG5153 CVT17 Putative lipase 91.8 0.45 9.8E-06 39.0 5.4 50 89-140 259-308 (425)
213 KOG2029 Uncharacterized conser 91.6 0.56 1.2E-05 42.3 6.3 38 105-142 525-573 (697)
214 cd00312 Esterase_lipase Estera 91.1 0.19 4.1E-06 45.4 3.0 55 88-142 156-214 (493)
215 KOG2385 Uncharacterized conser 90.7 0.87 1.9E-05 40.5 6.4 59 92-150 431-496 (633)
216 PF08237 PE-PPE: PE-PPE domain 89.8 1.4 3.1E-05 35.3 6.7 56 88-143 28-91 (225)
217 PLN03016 sinapoylglucose-malat 89.3 1.3 2.8E-05 39.3 6.6 54 90-143 146-212 (433)
218 COG4287 PqaA PhoPQ-activated p 89.0 3.6 7.8E-05 35.2 8.5 141 97-264 225-372 (507)
219 PLN02209 serine carboxypeptida 88.9 1.5 3.1E-05 39.0 6.6 56 223-279 351-432 (437)
220 COG4947 Uncharacterized protei 88.3 0.45 9.7E-06 36.0 2.6 36 106-141 101-136 (227)
221 KOG2112 Lysophospholipase [Lip 88.2 1.9 4E-05 33.8 6.0 53 88-140 70-127 (206)
222 COG2939 Carboxypeptidase C (ca 87.4 1.5 3.2E-05 39.0 5.6 53 88-140 178-235 (498)
223 PLN02213 sinapoylglucose-malat 86.4 2 4.3E-05 36.5 5.9 56 223-279 233-314 (319)
224 KOG2541 Palmitoyl protein thio 86.0 3.1 6.7E-05 34.0 6.3 53 89-141 73-128 (296)
225 PF00135 COesterase: Carboxyle 85.2 1.4 3.1E-05 40.0 4.7 54 89-142 189-246 (535)
226 PLN02209 serine carboxypeptida 85.1 2.5 5.3E-05 37.6 5.9 54 90-143 148-214 (437)
227 PLN03016 sinapoylglucose-malat 84.3 2.9 6.3E-05 37.1 6.0 56 223-279 347-428 (433)
228 PF07519 Tannase: Tannase and 82.8 2.9 6.3E-05 37.6 5.5 53 89-141 95-150 (474)
229 COG1073 Hydrolases of the alph 81.9 3 6.4E-05 34.2 5.0 55 224-278 233-293 (299)
230 KOG1282 Serine carboxypeptidas 81.2 3.3 7.3E-05 36.8 5.2 54 89-142 148-214 (454)
231 KOG1202 Animal-type fatty acid 79.8 5.6 0.00012 39.6 6.3 54 88-141 2163-2219(2376)
232 KOG2237 Predicted serine prote 79.5 3.2 6.9E-05 38.1 4.5 53 88-140 529-583 (712)
233 PF05576 Peptidase_S37: PS-10 79.1 1.5 3.1E-05 38.2 2.2 54 87-140 112-168 (448)
234 PF00698 Acyl_transf_1: Acyl t 76.7 1.9 4.1E-05 36.5 2.3 30 96-125 74-103 (318)
235 KOG1283 Serine carboxypeptidas 76.6 5.2 0.00011 33.7 4.6 56 88-143 97-168 (414)
236 TIGR03712 acc_sec_asp2 accesso 75.2 63 0.0014 29.1 12.2 52 89-142 338-391 (511)
237 COG2272 PnbA Carboxylesterase 75.0 1.7 3.7E-05 38.6 1.5 53 89-142 161-218 (491)
238 smart00827 PKS_AT Acyl transfe 74.9 3.4 7.4E-05 34.5 3.4 28 98-125 74-101 (298)
239 COG1505 Serine proteases of th 74.6 7.4 0.00016 35.6 5.3 51 88-139 480-533 (648)
240 TIGR03131 malonate_mdcH malona 73.0 4 8.7E-05 34.1 3.3 29 97-125 67-95 (295)
241 KOG4372 Predicted alpha/beta h 73.0 1.8 3.9E-05 37.4 1.2 36 90-125 134-169 (405)
242 COG2830 Uncharacterized protei 72.7 13 0.00028 28.0 5.4 34 106-141 57-90 (214)
243 TIGR00128 fabD malonyl CoA-acy 71.3 4.4 9.5E-05 33.6 3.2 29 98-126 74-103 (290)
244 cd07225 Pat_PNPLA6_PNPLA7 Pata 69.9 6 0.00013 33.4 3.7 32 96-127 33-64 (306)
245 PF09949 DUF2183: Uncharacteri 69.4 22 0.00048 24.4 5.7 44 93-136 52-97 (100)
246 PRK10279 hypothetical protein; 69.2 5.8 0.00013 33.4 3.4 33 97-129 24-56 (300)
247 COG1752 RssA Predicted esteras 68.7 6.2 0.00013 33.3 3.5 33 97-129 30-62 (306)
248 cd01714 ETF_beta The electron 68.1 12 0.00026 29.4 4.9 51 86-137 90-145 (202)
249 PF11713 Peptidase_C80: Peptid 67.8 6.1 0.00013 29.7 2.9 33 86-118 76-116 (157)
250 cd07198 Patatin Patatin-like p 65.2 8.8 0.00019 29.1 3.5 30 99-128 19-48 (172)
251 cd07227 Pat_Fungal_NTE1 Fungal 64.5 8.9 0.00019 31.7 3.6 31 97-127 29-59 (269)
252 cd07207 Pat_ExoU_VipD_like Exo 63.6 9.5 0.00021 29.5 3.5 29 99-127 20-48 (194)
253 TIGR02816 pfaB_fam PfaB family 60.6 8.9 0.00019 35.1 3.1 32 96-127 254-286 (538)
254 cd07210 Pat_hypo_W_succinogene 60.5 13 0.00028 29.7 3.7 29 100-128 22-50 (221)
255 COG2939 Carboxypeptidase C (ca 59.6 7.7 0.00017 34.7 2.5 26 254-279 463-488 (498)
256 COG0218 Predicted GTPase [Gene 57.2 19 0.00041 28.2 4.0 14 12-25 72-85 (200)
257 cd07209 Pat_hypo_Ecoli_Z1214_l 56.5 15 0.00032 29.1 3.5 31 98-128 18-48 (215)
258 KOG1282 Serine carboxypeptidas 55.5 25 0.00054 31.5 4.9 56 224-279 364-445 (454)
259 PF00448 SRP54: SRP54-type pro 54.1 29 0.00062 27.1 4.7 46 92-137 101-148 (196)
260 COG4553 DepA Poly-beta-hydroxy 52.7 56 0.0012 27.4 6.1 56 86-142 150-210 (415)
261 cd07228 Pat_NTE_like_bacteria 51.9 22 0.00048 27.0 3.7 29 100-128 22-50 (175)
262 KOG2551 Phospholipase/carboxyh 51.0 35 0.00077 27.2 4.6 52 89-142 88-148 (230)
263 TIGR01425 SRP54_euk signal rec 50.2 85 0.0018 28.0 7.3 16 6-21 179-194 (429)
264 KOG1516 Carboxylesterase and r 50.0 24 0.00052 32.4 4.2 54 89-142 176-233 (545)
265 cd07212 Pat_PNPLA9 Patatin-lik 49.1 29 0.00064 29.4 4.3 19 109-127 35-53 (312)
266 cd07205 Pat_PNPLA6_PNPLA7_NTE1 48.5 27 0.00059 26.5 3.7 28 100-127 22-49 (175)
267 PRK14974 cell division protein 46.5 86 0.0019 26.9 6.7 45 93-137 241-287 (336)
268 cd07230 Pat_TGL4-5_like Triacy 46.4 11 0.00023 33.5 1.3 33 99-131 94-126 (421)
269 cd07208 Pat_hypo_Ecoli_yjju_li 45.9 29 0.00063 28.4 3.8 32 99-130 19-51 (266)
270 cd07229 Pat_TGL3_like Triacylg 42.4 12 0.00027 32.6 1.0 38 98-135 103-140 (391)
271 KOG0781 Signal recognition par 41.8 86 0.0019 28.3 5.9 46 92-137 484-538 (587)
272 COG3887 Predicted signaling pr 40.4 74 0.0016 29.5 5.5 49 89-140 323-377 (655)
273 cd07232 Pat_PLPL Patain-like p 40.3 12 0.00027 32.9 0.7 35 100-134 89-123 (407)
274 cd07231 Pat_SDP1-like Sugar-De 39.9 15 0.00033 31.1 1.1 31 99-129 89-119 (323)
275 PF14253 AbiH: Bacteriophage a 38.9 35 0.00076 27.9 3.2 20 104-123 233-252 (270)
276 cd07224 Pat_like Patatin-like 38.9 42 0.00091 27.0 3.6 35 93-128 15-51 (233)
277 PF09419 PGP_phosphatase: Mito 38.6 1.5E+02 0.0032 22.6 6.2 28 89-116 61-88 (168)
278 PF10081 Abhydrolase_9: Alpha/ 36.4 67 0.0015 26.7 4.3 53 90-142 90-148 (289)
279 PF06850 PHB_depo_C: PHB de-po 36.2 37 0.0008 26.5 2.6 58 222-279 133-199 (202)
280 TIGR00064 ftsY signal recognit 34.9 1.9E+02 0.004 24.0 6.8 19 7-25 152-170 (272)
281 COG4813 ThuA Trehalose utiliza 34.1 66 0.0014 24.9 3.6 42 222-263 62-105 (261)
282 cd07204 Pat_PNPLA_like Patatin 33.7 60 0.0013 26.3 3.7 20 109-128 34-53 (243)
283 cd08769 DAP_dppA_2 Peptidase M 31.6 1.6E+02 0.0034 24.5 5.7 51 221-277 145-198 (270)
284 PF03681 UPF0150: Uncharacteri 31.6 58 0.0013 18.5 2.5 15 7-21 11-25 (48)
285 COG2230 Cfa Cyclopropane fatty 31.6 1.2E+02 0.0027 25.3 5.1 47 90-137 55-104 (283)
286 TIGR00959 ffh signal recogniti 31.4 2E+02 0.0044 25.6 6.8 18 7-24 180-197 (428)
287 cd07206 Pat_TGL3-4-5_SDP1 Tria 31.3 49 0.0011 27.8 2.8 31 101-131 92-122 (298)
288 PF00091 Tubulin: Tubulin/FtsZ 31.2 1.9E+02 0.0041 22.8 6.1 33 89-121 107-139 (216)
289 COG0331 FabD (acyl-carrier-pro 31.0 58 0.0013 27.6 3.3 22 104-125 83-104 (310)
290 PF10561 UPF0565: Uncharacteri 30.6 95 0.0021 26.2 4.4 43 106-148 193-251 (303)
291 COG4667 Predicted esterase of 30.6 43 0.00094 27.6 2.3 43 93-136 27-70 (292)
292 cd00382 beta_CA Carbonic anhyd 30.5 83 0.0018 22.3 3.6 31 91-121 44-74 (119)
293 PF03283 PAE: Pectinacetyleste 30.2 1.2E+02 0.0027 26.2 5.2 48 95-142 143-196 (361)
294 cd08770 DAP_dppA_3 Peptidase M 30.1 1.6E+02 0.0034 24.3 5.5 51 221-277 145-197 (263)
295 PF09994 DUF2235: Uncharacteri 30.1 1.1E+02 0.0023 25.5 4.7 38 89-126 73-112 (277)
296 cd06533 Glyco_transf_WecG_TagA 28.6 1.2E+02 0.0025 23.1 4.3 51 223-276 46-96 (171)
297 COG0541 Ffh Signal recognition 28.4 2.7E+02 0.0058 25.0 6.8 48 90-137 198-247 (451)
298 cd07218 Pat_iPLA2 Calcium-inde 28.3 74 0.0016 25.9 3.4 20 109-128 33-52 (245)
299 PLN00021 chlorophyllase 27.8 1.1E+02 0.0023 26.0 4.4 47 222-268 188-246 (313)
300 TIGR00090 iojap_ybeB iojap-lik 27.2 57 0.0012 22.3 2.2 25 89-113 43-67 (99)
301 PRK04148 hypothetical protein; 27.2 1.4E+02 0.003 21.8 4.3 46 91-140 3-48 (134)
302 cd08663 DAP_dppA_1 Peptidase M 27.1 2.1E+02 0.0044 23.7 5.7 51 221-277 145-198 (266)
303 TIGR02813 omega_3_PfaA polyket 26.9 56 0.0012 36.3 3.0 29 96-124 664-692 (2582)
304 cd01819 Patatin_and_cPLA2 Pata 26.6 86 0.0019 23.3 3.3 30 94-124 15-46 (155)
305 PRK06731 flhF flagellar biosyn 26.6 3.7E+02 0.0081 22.3 7.6 42 96-137 176-219 (270)
306 cd00281 DAP_dppA Peptidase M55 26.6 2.2E+02 0.0047 23.6 5.7 51 221-277 144-197 (265)
307 PRK08671 methionine aminopepti 26.2 57 0.0012 27.3 2.4 32 86-117 124-156 (291)
308 cd07221 Pat_PNPLA3 Patatin-lik 26.1 91 0.002 25.5 3.5 35 93-128 16-54 (252)
309 PF06858 NOG1: Nucleolar GTP-b 25.8 1.7E+02 0.0036 17.9 3.8 26 86-111 28-53 (58)
310 KOG1200 Mitochondrial/plastidi 25.5 2E+02 0.0044 22.8 5.0 19 2-20 31-49 (256)
311 cd07220 Pat_PNPLA2 Patatin-lik 25.5 95 0.0021 25.3 3.5 22 107-128 37-58 (249)
312 cd03379 beta_CA_cladeD Carboni 25.2 98 0.0021 22.7 3.3 30 91-120 41-70 (142)
313 PF15566 Imm18: Immunity prote 25.2 1.1E+02 0.0025 18.1 2.8 31 89-119 4-34 (52)
314 cd01088 MetAP2 Methionine Amin 25.1 62 0.0014 27.0 2.5 32 86-117 123-155 (291)
315 PRK12724 flagellar biosynthesi 24.7 4.2E+02 0.0091 23.8 7.4 18 5-22 295-312 (432)
316 PF04951 Peptidase_M55: D-amin 24.4 94 0.002 25.7 3.3 50 222-277 146-198 (265)
317 cd07222 Pat_PNPLA4 Patatin-lik 24.0 96 0.0021 25.2 3.3 21 109-130 34-54 (246)
318 PLN02752 [acyl-carrier protein 23.7 67 0.0015 27.5 2.5 18 108-125 126-143 (343)
319 PF03490 Varsurf_PPLC: Variant 23.5 1E+02 0.0022 18.1 2.3 27 86-112 5-31 (51)
320 PF03808 Glyco_tran_WecB: Glyc 23.2 2E+02 0.0042 21.8 4.7 38 223-262 48-85 (172)
321 PF00484 Pro_CA: Carbonic anhy 23.0 2.4E+02 0.0051 20.7 5.1 35 90-124 39-73 (153)
322 PF05576 Peptidase_S37: PS-10 23.0 80 0.0017 27.9 2.7 55 222-278 350-410 (448)
323 PF06289 FlbD: Flagellar prote 22.4 73 0.0016 19.6 1.7 32 247-278 23-54 (60)
324 PRK10867 signal recognition pa 22.3 4.1E+02 0.0089 23.8 7.1 17 7-23 181-197 (433)
325 COG4850 Uncharacterized conser 22.3 2.2E+02 0.0048 24.3 5.0 47 94-140 266-314 (373)
326 PLN03006 carbonate dehydratase 22.1 1.2E+02 0.0027 25.5 3.6 31 92-122 158-188 (301)
327 PF12242 Eno-Rase_NADH_b: NAD( 21.9 1.8E+02 0.004 18.9 3.5 24 104-127 38-61 (78)
328 PLN00179 acyl- [acyl-carrier p 21.7 53 0.0011 28.5 1.4 47 86-134 316-362 (390)
329 PRK10319 N-acetylmuramoyl-l-al 21.6 2.5E+02 0.0054 23.5 5.3 15 10-25 56-70 (287)
330 PF01734 Patatin: Patatin-like 21.1 1.2E+02 0.0025 22.7 3.2 24 103-126 24-47 (204)
331 PF00862 Sucrose_synth: Sucros 21.1 1.5E+02 0.0032 27.1 4.0 38 89-126 383-422 (550)
332 cd00883 beta_CA_cladeA Carboni 20.8 1.5E+02 0.0032 22.9 3.6 33 92-124 67-99 (182)
333 PF08484 Methyltransf_14: C-me 20.5 2.3E+02 0.005 21.3 4.5 51 90-140 51-103 (160)
334 PF08197 TT_ORF2a: pORF2a trun 20.3 76 0.0017 17.9 1.4 13 11-23 36-48 (49)
335 PRK07281 methionine aminopepti 20.2 1.2E+02 0.0026 25.3 3.3 32 85-116 170-202 (286)
336 PF01221 Dynein_light: Dynein 20.2 1E+02 0.0023 20.4 2.4 32 88-119 34-66 (89)
337 cd07217 Pat17_PNPLA8_PNPLA9_li 20.1 77 0.0017 27.3 2.1 18 109-126 44-61 (344)
338 COG1255 Uncharacterized protei 20.1 55 0.0012 23.2 1.0 19 1-19 28-46 (129)
No 1
>PLN02965 Probable pheophorbidase
Probab=99.96 E-value=1.3e-28 Score=202.00 Aligned_cols=219 Identities=11% Similarity=0.037 Sum_probs=133.8
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.+.||+|+++|+||||.|+. +...
T Consensus 23 ~~~L~~~~~~via~Dl~G~G~S~~---------------~~~~------------------------------------- 50 (255)
T PLN02965 23 ATLLDAAGFKSTCVDLTGAGISLT---------------DSNT------------------------------------- 50 (255)
T ss_pred HHHHhhCCceEEEecCCcCCCCCC---------------Cccc-------------------------------------
Confidence 467867789999999999999986 2210
Q ss_pred ccccccChHHHHHHHHHHHHhcCC-ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhh
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNL-APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL 160 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~ 160 (279)
.|+++++++++.++++.++. ++++||||||||.+++.+|.++|++|+++|++++........+.. .......
T Consensus 51 ----~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~---~~~~~~~ 123 (255)
T PLN02965 51 ----VSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGSVTEALCKFTDKISMAIYVAAAMVKPGSIISP---RLKNVME 123 (255)
T ss_pred ----cCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHHHHHHHHhCchheeEEEEEccccCCCCCCccH---HHHhhhh
Confidence 25799999999999999987 499999999999999999999999999999999864311100000 0000000
Q ss_pred cChhHHHHHHHHhhccCCCchhH-HhHH-HhhcCcchhhhHHHHHhhcccc-----cccccccccccccCCCEEEEeeCC
Q 023683 161 GSSFGYQWLIRFCCMKKVGSFDV-EDNR-VLLKGRDRCRAVSEMGRKLNNS-----FDMAEWGSSEGIKGIPMQILWSSV 233 (279)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~Pvlii~G~~ 233 (279)
.........+............. .... ..+...............+... ............+++|+++|+|++
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~vP~lvi~g~~ 203 (255)
T PLN02965 124 GTEKIWDYTFGEGPDKPPTGIMMKPEFVRHYYYNQSPLEDYTLSSKLLRPAPVRAFQDLDKLPPNPEAEKVPRVYIKTAK 203 (255)
T ss_pred ccccceeeeeccCCCCCcchhhcCHHHHHHHHhcCCCHHHHHHHHHhcCCCCCcchhhhhhccchhhcCCCCEEEEEcCC
Confidence 00000000000000000000000 0000 0000000000000000000000 000011112335789999999998
Q ss_pred CCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 234 WSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 234 d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
|...+.+..+.+++.+|+++++++ +|||++++|+|++|++.|.+|+
T Consensus 204 D~~~~~~~~~~~~~~~~~a~~~~i~~~GH~~~~e~p~~v~~~l~~~~ 250 (255)
T PLN02965 204 DNLFDPVRQDVMVENWPPAQTYVLEDSDHSAFFSVPTTLFQYLLQAV 250 (255)
T ss_pred CCCCCHHHHHHHHHhCCcceEEEecCCCCchhhcCHHHHHHHHHHHH
Confidence 777777899999999999999988 7999999999999999999874
No 2
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=1.3e-28 Score=206.21 Aligned_cols=220 Identities=15% Similarity=0.145 Sum_probs=141.0
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.++ |+||++|+||||.|+. |..
T Consensus 47 ~~~L~~~-~~via~D~~G~G~S~~---------------~~~-------------------------------------- 72 (295)
T PRK03592 47 IPHLAGL-GRCLAPDLIGMGASDK---------------PDI-------------------------------------- 72 (295)
T ss_pred HHHHhhC-CEEEEEcCCCCCCCCC---------------CCC--------------------------------------
Confidence 4678888 6999999999999988 322
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCc-chhhhhhhhHHHHhhh
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPA-LPLFALNLPLIRDFVL 160 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~-~~~~~~~~~~~~~~~~ 160 (279)
+|+.+++++++.+++++++++++++|||||||.+++.+|.++|++|+++|++++...+. ...+..........+.
T Consensus 73 ----~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (295)
T PRK03592 73 ----DYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFDWAARHPDRVRGIAFMEAIVRPMTWDDFPPAVRELFQALR 148 (295)
T ss_pred ----CCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHhChhheeEEEEECCCCCCcchhhcchhHHHHHHHHh
Confidence 25799999999999999999999999999999999999999999999999999854321 1111000000011111
Q ss_pred c----C------hhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccc-------cccccccccccC
Q 023683 161 G----S------SFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFD-------MAEWGSSEGIKG 223 (279)
Q Consensus 161 ~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~ 223 (279)
. . ..++..++.......++++....+...+..+........+.+....... ...+......++
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~ 228 (295)
T PRK03592 149 SPGEGEEMVLEENVFIERVLPGSILRPLSDEEMAVYRRPFPTPESRRPTLSWPRELPIDGEPADVVALVEEYAQWLATSD 228 (295)
T ss_pred CcccccccccchhhHHhhcccCcccccCCHHHHHHHHhhcCCchhhhhhhhhhhhcCCCCcchhhHhhhhHhHHHhccCC
Confidence 0 0 0111111111111123344444444433333333333333332221100 011122245579
Q ss_pred CCEEEEeeCCCCcccchhH-HHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 224 IPMQILWSSVWSKEWSEEG-SRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 224 ~Pvlii~G~~d~~~~~~~~-~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+|+|+|+|++|...+.... +.+.+..++++++++ ++||++++|+|+++++.|.+|+
T Consensus 229 ~P~lii~G~~D~~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~v~~~i~~fl 286 (295)
T PRK03592 229 VPKLLINAEPGAILTTGAIRDWCRSWPNQLEITVFGAGLHFAQEDSPEEIGAAIAAWL 286 (295)
T ss_pred CCeEEEeccCCcccCcHHHHHHHHHhhhhcceeeccCcchhhhhcCHHHHHHHHHHHH
Confidence 9999999997665534334 444556788999999 7999999999999999999985
No 3
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.96 E-value=6.4e-28 Score=201.91 Aligned_cols=223 Identities=15% Similarity=0.096 Sum_probs=139.4
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|+++ |+|+++|+||||.|+. +..... +
T Consensus 49 ~~~L~~~-~~vi~~DlpG~G~S~~---------------~~~~~~--------------------~-------------- 78 (294)
T PLN02824 49 TPVLAKS-HRVYAIDLLGYGYSDK---------------PNPRSA--------------------P-------------- 78 (294)
T ss_pred HHHHHhC-CeEEEEcCCCCCCCCC---------------Cccccc--------------------c--------------
Confidence 5678887 8999999999999987 211000 0
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCc----chhhhh-hhhHHH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPA----LPLFAL-NLPLIR 156 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~----~~~~~~-~~~~~~ 156 (279)
....|+++++++++.+++++++.++++||||||||.+++.+|.++|++|+++|++++..... .+.+.. ....+.
T Consensus 79 -~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 157 (294)
T PLN02824 79 -PNSFYTFETWGEQLNDFCSDVVGDPAFVICNSVGGVVGLQAAVDAPELVRGVMLINISLRGLHIKKQPWLGRPFIKAFQ 157 (294)
T ss_pred -ccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCHHHHHHHHHHHhChhheeEEEEECCCcccccccccchhhhHHHHHHH
Confidence 00026899999999999999999999999999999999999999999999999999864321 100000 000011
Q ss_pred Hhhhc------------ChhHHHHHHHHhhc--cCCCchhHHhHHHhhcCcchhhhHHHHHhhccccccccccccccccc
Q 023683 157 DFVLG------------SSFGYQWLIRFCCM--KKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIK 222 (279)
Q Consensus 157 ~~~~~------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (279)
..+.. ....+..++..... ...+.+..+.+...............+.. .. ...........+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~~~~~~~l~~i 233 (294)
T PLN02824 158 NLLRETAVGKAFFKSVATPETVKNILCQCYHDDSAVTDELVEAILRPGLEPGAVDVFLDFIS---YS-GGPLPEELLPAV 233 (294)
T ss_pred HHHhchhHHHHHHHhhcCHHHHHHHHHHhccChhhccHHHHHHHHhccCCchHHHHHHHHhc---cc-cccchHHHHhhc
Confidence 11100 00011111111111 11222222222111111111111111110 00 011112224568
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
++|+++|+|++|...+.+..+.+.+..++++++++ ++||++++|+|++|++.|.+|+
T Consensus 234 ~~P~lvi~G~~D~~~~~~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 291 (294)
T PLN02824 234 KCPVLIAWGEKDPWEPVELGRAYANFDAVEDFIVLPGVGHCPQDEAPELVNPLIESFV 291 (294)
T ss_pred CCCeEEEEecCCCCCChHHHHHHHhcCCccceEEeCCCCCChhhhCHHHHHHHHHHHH
Confidence 99999999998776667788888888888999999 7999999999999999999986
No 4
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.96 E-value=4.3e-28 Score=203.71 Aligned_cols=221 Identities=17% Similarity=0.084 Sum_probs=134.7
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.++||+|+++|+||||.|+. +...
T Consensus 66 ~~~L~~~gy~vi~~Dl~G~G~S~~---------------~~~~------------------------------------- 93 (302)
T PRK00870 66 IPILAAAGHRVIAPDLIGFGRSDK---------------PTRR------------------------------------- 93 (302)
T ss_pred HHHHHhCCCEEEEECCCCCCCCCC---------------CCCc-------------------------------------
Confidence 467877789999999999999987 3210
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhc
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLG 161 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (279)
.+|+++++++++.++++++++++++++||||||.+++.+|.++|++|+++|++++..+...................
T Consensus 94 ---~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (302)
T PRK00870 94 ---EDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLIGLRLAAEHPDRFARLVVANTGLPTGDGPMPDAFWAWRAFSQY 170 (302)
T ss_pred ---ccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHHHHHHHHhChhheeEEEEeCCCCCCccccchHHHhhhhccccc
Confidence 02679999999999999999999999999999999999999999999999999976432111000000000000000
Q ss_pred -ChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcc-ccc---c---cccccccccccCCCEEEEeeCC
Q 023683 162 -SSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLN-NSF---D---MAEWGSSEGIKGIPMQILWSSV 233 (279)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---~---~~~~~~~~~~~~~Pvlii~G~~ 233 (279)
....+...+........+.+....+........ ..........+. ... . ..........+++|+++|+|++
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~P~lii~G~~ 249 (302)
T PRK00870 171 SPVLPVGRLVNGGTVRDLSDAVRAAYDAPFPDES-YKAGARAFPLLVPTSPDDPAVAANRAAWAVLERWDKPFLTAFSDS 249 (302)
T ss_pred CchhhHHHHhhccccccCCHHHHHHhhcccCChh-hhcchhhhhhcCCCCCCCcchHHHHHHHHhhhcCCCceEEEecCC
Confidence 001111111111111122222222211111100 000000000000 000 0 0000112345889999999998
Q ss_pred CCcccchhHHHHHhhCCCCc---EEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 234 WSKEWSEEGSRVADALPQAK---FVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 234 d~~~~~~~~~~~~~~~~~~~---~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
|...+... +.+.+.+++++ ++++ ++||++++|+|++|++.|.+|+
T Consensus 250 D~~~~~~~-~~~~~~~~~~~~~~~~~i~~~gH~~~~e~p~~~~~~l~~fl 298 (302)
T PRK00870 250 DPITGGGD-AILQKRIPGAAGQPHPTIKGAGHFLQEDSGEELAEAVLEFI 298 (302)
T ss_pred CCcccCch-HHHHhhcccccccceeeecCCCccchhhChHHHHHHHHHHH
Confidence 76555544 78889899876 7778 6899999999999999999985
No 5
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=99.96 E-value=7e-28 Score=194.72 Aligned_cols=220 Identities=18% Similarity=0.133 Sum_probs=153.9
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|+.+||+|+|+|+||+|.|+. |+..
T Consensus 64 ~~~la~~~~rviA~DlrGyG~Sd~---------------P~~~------------------------------------- 91 (322)
T KOG4178|consen 64 IPGLASRGYRVIAPDLRGYGFSDA---------------PPHI------------------------------------- 91 (322)
T ss_pred hhhhhhcceEEEecCCCCCCCCCC---------------CCCc-------------------------------------
Confidence 467889999999999999999999 4431
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch------------hh-
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP------------LF- 148 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~------------~~- 148 (279)
..||+..++.|+..++++++.++++++||+||+++|..+|..+|++|+++|.++.+...... .+
T Consensus 92 ---~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaivaw~la~~~Perv~~lv~~nv~~~~p~~~~~~~~~~~f~~~~y 168 (322)
T KOG4178|consen 92 ---SEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIVAWRLALFYPERVDGLVTLNVPFPNPKLKPLDSSKAIFGKSYY 168 (322)
T ss_pred ---ceeeHHHHHHHHHHHHHHhccceeEEEeccchhHHHHHHHHhChhhcceEEEecCCCCCcccchhhhhccccCccce
Confidence 14789999999999999999999999999999999999999999999999999988541110 00
Q ss_pred --hhhhhHHHHhhhc---ChhHHHHHHHHhhc-------------cCCCchhHHhHHHhhcCcchhhhHHHHHhhccccc
Q 023683 149 --ALNLPLIRDFVLG---SSFGYQWLIRFCCM-------------KKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSF 210 (279)
Q Consensus 149 --~~~~~~~~~~~~~---~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (279)
.+..+...+.... .+.....+.....+ ...+.++++.+...+.. +.....+.+++.+....
T Consensus 169 ~~~fQ~~~~~E~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~t~edi~~~~~~f~~-~g~~gplNyyrn~~r~w 247 (322)
T KOG4178|consen 169 ICLFQEPGKPETELSKDDTEMLVKTFRTRKTPGPLIVPKQPNENPLWLTEEDIAFYVSKFQI-DGFTGPLNYYRNFRRNW 247 (322)
T ss_pred eEeccccCcchhhhccchhHHhHHhhhccccCCccccCCCCCCccchhhHHHHHHHHhcccc-ccccccchhhHHHhhCc
Confidence 0111111111110 11112222221111 01334555555555533 34677777777776653
Q ss_pred ccccccccccccCCCEEEEeeCCCCcccc-hhHHHHHhhCCCC-cEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 211 DMAEWGSSEGIKGIPMQILWSSVWSKEWS-EEGSRVADALPQA-KFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 211 ~~~~~~~~~~~~~~Pvlii~G~~d~~~~~-~~~~~~~~~~~~~-~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
. ........+++|+++|+|++|...+. .....+++..|+. +.+++ ++|||++.|+|+++++.|.+|+
T Consensus 248 ~--a~~~~~~~i~iPv~fi~G~~D~v~~~p~~~~~~rk~vp~l~~~vv~~~~gH~vqqe~p~~v~~~i~~f~ 317 (322)
T KOG4178|consen 248 E--AAPWALAKITIPVLFIWGDLDPVLPYPIFGELYRKDVPRLTERVVIEGIGHFVQQEKPQEVNQAILGFI 317 (322)
T ss_pred h--hccccccccccceEEEEecCcccccchhHHHHHHHhhccccceEEecCCcccccccCHHHHHHHHHHHH
Confidence 2 22233566899999999998765555 4566777778877 44555 7999999999999999999885
No 6
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.96 E-value=7.5e-28 Score=199.69 Aligned_cols=212 Identities=13% Similarity=0.034 Sum_probs=136.7
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.+. |+|+++|+||||.|+. +..
T Consensus 45 ~~~L~~~-~~vi~~Dl~G~G~S~~---------------~~~-------------------------------------- 70 (276)
T TIGR02240 45 IEALDPD-LEVIAFDVPGVGGSST---------------PRH-------------------------------------- 70 (276)
T ss_pred HHHhccC-ceEEEECCCCCCCCCC---------------CCC--------------------------------------
Confidence 4567665 9999999999999987 322
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhc
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLG 161 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (279)
+|+++++++++.++++.+++++++||||||||.+++.+|.++|++|+++|++++.......... +........
T Consensus 71 ----~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~---~~~~~~~~~ 143 (276)
T TIGR02240 71 ----PYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQFAHDYPERCKKLILAATAAGAVMVPGK---PKVLMMMAS 143 (276)
T ss_pred ----cCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHHHHHHCHHHhhheEEeccCCccccCCCc---hhHHHHhcC
Confidence 2579999999999999999999999999999999999999999999999999987542110000 000000000
Q ss_pred ChhHHH-----HHHHHhhcc--CCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCC
Q 023683 162 SSFGYQ-----WLIRFCCMK--KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVW 234 (279)
Q Consensus 162 ~~~~~~-----~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d 234 (279)
...+.. ......... ...+.....+..................... . ........+++|+++|+|++|
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~l~~i~~P~lii~G~~D 218 (276)
T TIGR02240 144 PRRYIQPSHGIHIAPDIYGGAFRRDPELAMAHASKVRSGGKLGYYWQLFAGLG----W-TSIHWLHKIQQPTLVLAGDDD 218 (276)
T ss_pred chhhhccccccchhhhhccceeeccchhhhhhhhhcccCCCchHHHHHHHHcC----C-chhhHhhcCCCCEEEEEeCCC
Confidence 000000 000000000 0111111111111111111111111111110 0 011224568899999999987
Q ss_pred CcccchhHHHHHhhCCCCcEEEecCCCCCCCcchHHHHHHHhhcC
Q 023683 235 SKEWSEEGSRVADALPQAKFVGHSGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl 279 (279)
...+.+..+.+.+.+|+++++++++||++++|+|+++++.|.+|+
T Consensus 219 ~~v~~~~~~~l~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl 263 (276)
T TIGR02240 219 PIIPLINMRLLAWRIPNAELHIIDDGHLFLITRAEAVAPIIMKFL 263 (276)
T ss_pred CcCCHHHHHHHHHhCCCCEEEEEcCCCchhhccHHHHHHHHHHHH
Confidence 666668889999999999999888899999999999999999985
No 7
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.95 E-value=4.4e-27 Score=195.85 Aligned_cols=221 Identities=21% Similarity=0.228 Sum_probs=135.2
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.+. |+|+++|+||||.|+. |.+ .
T Consensus 54 ~~~l~~~-~~vi~~D~~G~G~S~~---------------~~~-~------------------------------------ 80 (286)
T PRK03204 54 IVALRDR-FRCVAPDYLGFGLSER---------------PSG-F------------------------------------ 80 (286)
T ss_pred HHHHhCC-cEEEEECCCCCCCCCC---------------CCc-c------------------------------------
Confidence 4567665 9999999999999987 322 0
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch--hhhhhhh----HH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP--LFALNLP----LI 155 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~----~~ 155 (279)
.|+.+++++++.+++++++.++++++||||||.+++.++..+|++|+++|++++....... ...+... ..
T Consensus 81 ----~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (286)
T PRK03204 81 ----GYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISMAVAVERADRVRGVVLGNTWFWPADTLAMKAFSRVMSSPPV 156 (286)
T ss_pred ----ccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHHHHHHhChhheeEEEEECccccCCCchhHHHHHHHhccccc
Confidence 2578999999999999999999999999999999999999999999999998876422110 0000000 00
Q ss_pred HHhhhcChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhccccc-cccccc-cccc-ccCCCEEEEeeC
Q 023683 156 RDFVLGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSF-DMAEWG-SSEG-IKGIPMQILWSS 232 (279)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~-~~~~-~~~~Pvlii~G~ 232 (279)
...+.....+...++........+......+......+............+.... ...... .... .+++|+++|+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~PtliI~G~ 236 (286)
T PRK03204 157 QYAILRRNFFVERLIPAGTEHRPSSAVMAHYRAVQPNAAARRGVAEMPKQILAARPLLARLAREVPATLGTKPTLLVWGM 236 (286)
T ss_pred hhhhhhhhHHHHHhccccccCCCCHHHHHHhcCCCCCHHHHHHHHHHHHhcchhhHHHHHhhhhhhhhcCCCCeEEEecC
Confidence 0000000111111111111112233333333222222111111111111110000 000000 0011 138999999999
Q ss_pred CCCcccc-hhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 233 VWSKEWS-EEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 233 ~d~~~~~-~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+|...+. ...+.+.+.+|+++++++ ++||++++|+|+++++.|.+|+
T Consensus 237 ~D~~~~~~~~~~~~~~~ip~~~~~~i~~aGH~~~~e~Pe~~~~~i~~~~ 285 (286)
T PRK03204 237 KDVAFRPKTILPRLRATFPDHVLVELPNAKHFIQEDAPDRIAAAIIERF 285 (286)
T ss_pred CCcccCcHHHHHHHHHhcCCCeEEEcCCCcccccccCHHHHHHHHHHhc
Confidence 7654433 457889999999999999 7999999999999999999996
No 8
>PLN02578 hydrolase
Probab=99.95 E-value=3e-26 Score=196.33 Aligned_cols=220 Identities=15% Similarity=0.138 Sum_probs=138.2
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.++ |+|+++|+||||.|+. +..
T Consensus 106 ~~~l~~~-~~v~~~D~~G~G~S~~---------------~~~-------------------------------------- 131 (354)
T PLN02578 106 IPELAKK-YKVYALDLLGFGWSDK---------------ALI-------------------------------------- 131 (354)
T ss_pred HHHHhcC-CEEEEECCCCCCCCCC---------------ccc--------------------------------------
Confidence 4567665 9999999999999988 322
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchh------------hh
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPL------------FA 149 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~------------~~ 149 (279)
.|+.+.+++++.++++.+..++++++||||||.+++.+|.++|++|+++|++++........ +.
T Consensus 132 ----~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~~A~~~p~~v~~lvLv~~~~~~~~~~~~~~~~~~~~~~~~ 207 (354)
T PLN02578 132 ----EYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALSTAVGYPELVAGVALLNSAGQFGSESREKEEAIVVEETVL 207 (354)
T ss_pred ----ccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHHHHHhChHhcceEEEECCCccccccccccccccccccchh
Confidence 26789999999999999988999999999999999999999999999999998864211100 00
Q ss_pred hh--hhHHHHhhh-----------cChhHHHHHHHHhhcc--CCCchhHHhHHHhhcCcchhhhHHHHHhhccccccccc
Q 023683 150 LN--LPLIRDFVL-----------GSSFGYQWLIRFCCMK--KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAE 214 (279)
Q Consensus 150 ~~--~~~~~~~~~-----------~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (279)
.. .......+. .....+.......... ..++...+........+.......+.............
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (354)
T PLN02578 208 TRFVVKPLKEWFQRVVLGFLFWQAKQPSRIESVLKSVYKDKSNVDDYLVESITEPAADPNAGEVYYRLMSRFLFNQSRYT 287 (354)
T ss_pred hHHHhHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHhcCCcccCCHHHHHHHHhcccCCchHHHHHHHHHHHhcCCCCCC
Confidence 00 000000000 0000011111110000 01111111111111122222222222221111101111
Q ss_pred ccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEecCCCCCCCcchHHHHHHHhhcC
Q 023683 215 WGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 215 ~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.......+++|+++|+|++|...+.+..+.+++.+|+++++++++||++++|+|+++++.|.+|+
T Consensus 288 ~~~~l~~i~~PvLiI~G~~D~~v~~~~~~~l~~~~p~a~l~~i~~GH~~~~e~p~~~~~~I~~fl 352 (354)
T PLN02578 288 LDSLLSKLSCPLLLLWGDLDPWVGPAKAEKIKAFYPDTTLVNLQAGHCPHDEVPEQVNKALLEWL 352 (354)
T ss_pred HHHHhhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCccccCHHHHHHHHHHHH
Confidence 22234568999999999987555567888999999999998889999999999999999999986
No 9
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.95 E-value=2.6e-26 Score=190.90 Aligned_cols=217 Identities=14% Similarity=0.122 Sum_probs=132.9
Q ss_pred hhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhcc
Q 023683 4 SLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVK 83 (279)
Q Consensus 4 ~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
.|.+.||+|+++|+||||.|+. +.....
T Consensus 55 ~l~~~~~~vi~~D~~G~G~S~~---------------~~~~~~------------------------------------- 82 (282)
T TIGR03343 55 PFVDAGYRVILKDSPGFNKSDA---------------VVMDEQ------------------------------------- 82 (282)
T ss_pred HHHhCCCEEEEECCCCCCCCCC---------------CcCccc-------------------------------------
Confidence 4556689999999999999987 211100
Q ss_pred ccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcc--hhhh-hhhhHHHHhhh
Q 023683 84 VIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL--PLFA-LNLPLIRDFVL 160 (279)
Q Consensus 84 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~--~~~~-~~~~~~~~~~~ 160 (279)
....+++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++...... ..+. ...........
T Consensus 83 ----~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (282)
T TIGR03343 83 ----RGLVNARAVKGLMDALDIEKAHLVGNSMGGATALNFALEYPDRIGKLILMGPGGLGPSLFAPMPMEGIKLLFKLYA 158 (282)
T ss_pred ----ccchhHHHHHHHHHHcCCCCeeEEEECchHHHHHHHHHhChHhhceEEEECCCCCCccccccCchHHHHHHHHHhc
Confidence 1124688999999999999999999999999999999999999999999998632111 0000 00000001000
Q ss_pred -cChhHHHHHHHHhh--ccCCCchhHHhHHH-hhcCcchhhhHHHHHhhccc-ccccccccccccccCCCEEEEeeCCCC
Q 023683 161 -GSSFGYQWLIRFCC--MKKVGSFDVEDNRV-LLKGRDRCRAVSEMGRKLNN-SFDMAEWGSSEGIKGIPMQILWSSVWS 235 (279)
Q Consensus 161 -~~~~~~~~~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Pvlii~G~~d~ 235 (279)
.....+..++.... ....+....+.... ....+... ..+...... .....+.......+++|+|+++|++|.
T Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlli~G~~D~ 235 (282)
T TIGR03343 159 EPSYETLKQMLNVFLFDQSLITEELLQGRWENIQRQPEHL---KNFLISSQKAPLSTWDVTARLGEIKAKTLVTWGRDDR 235 (282)
T ss_pred CCCHHHHHHHHhhCccCcccCcHHHHHhHHHHhhcCHHHH---HHHHHhccccccccchHHHHHhhCCCCEEEEEccCCC
Confidence 00011111111110 11112222211111 11111111 111111000 000111122245689999999999876
Q ss_pred cccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 236 KEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
..+.+..+.+++.+|+++++++ ++||++++|+|++|++.|.+||
T Consensus 236 ~v~~~~~~~~~~~~~~~~~~~i~~agH~~~~e~p~~~~~~i~~fl 280 (282)
T TIGR03343 236 FVPLDHGLKLLWNMPDAQLHVFSRCGHWAQWEHADAFNRLVIDFL 280 (282)
T ss_pred cCCchhHHHHHHhCCCCEEEEeCCCCcCCcccCHHHHHHHHHHHh
Confidence 6667888999999999999999 7999999999999999999986
No 10
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.95 E-value=4.4e-26 Score=186.79 Aligned_cols=207 Identities=14% Similarity=0.116 Sum_probs=132.8
Q ss_pred hhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhc
Q 023683 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (279)
Q Consensus 3 ~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
..|.+. |+|+++|+||||.|.. +.
T Consensus 37 ~~l~~~-~~vi~~D~~G~G~s~~---------------~~---------------------------------------- 60 (255)
T PRK10673 37 RDLVND-HDIIQVDMRNHGLSPR---------------DP---------------------------------------- 60 (255)
T ss_pred HHHhhC-CeEEEECCCCCCCCCC---------------CC----------------------------------------
Confidence 456555 9999999999999987 32
Q ss_pred cccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhh-hHHHHhhh-
Q 023683 83 KVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNL-PLIRDFVL- 160 (279)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~~~~- 160 (279)
.++++++++++.+++++++.++++|+||||||.+++.+|.++|++|+++|++++.+......+.... ..+.....
T Consensus 61 ---~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~~~~v~~lvli~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (255)
T PRK10673 61 ---VMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSEA 137 (255)
T ss_pred ---CCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHHHHhCHhhcceEEEEecCCCCccchhhHHHHHHHHHhhhc
Confidence 2578999999999999999999999999999999999999999999999999875432211111000 00000000
Q ss_pred c--ChhHHHHHHHHhhccCCCchhHHhHH-HhhcCcch---hhhHHHHHhhcccccccccccccccccCCCEEEEeeCCC
Q 023683 161 G--SSFGYQWLIRFCCMKKVGSFDVEDNR-VLLKGRDR---CRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVW 234 (279)
Q Consensus 161 ~--~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d 234 (279)
. ........+.. .+.......+. ..+..... .......+.... .+ .....+++|+|+|+|++|
T Consensus 138 ~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~-~~~~~~~~P~l~i~G~~D 206 (255)
T PRK10673 138 GATTRQQAAAIMRQ----HLNEEGVIQFLLKSFVDGEWRFNVPVLWDQYPHIV------GW-EKIPAWPHPALFIRGGNS 206 (255)
T ss_pred ccccHHHHHHHHHH----hcCCHHHHHHHHhcCCcceeEeeHHHHHHhHHHHh------CC-cccCCCCCCeEEEECCCC
Confidence 0 00000000000 01111111111 11111000 000111111110 01 123346899999999987
Q ss_pred CcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 235 SKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.....+..+.+++.+|+++++++ ++||++++|+|+++++.|.+||
T Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~l~~fl 252 (255)
T PRK10673 207 PYVTEAYRDDLLAQFPQARAHVIAGAGHWVHAEKPDAVLRAIRRYL 252 (255)
T ss_pred CCCCHHHHHHHHHhCCCcEEEEeCCCCCeeeccCHHHHHHHHHHHH
Confidence 65666888899999999999989 7999999999999999999986
No 11
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.94 E-value=2.8e-26 Score=196.82 Aligned_cols=217 Identities=17% Similarity=0.114 Sum_probs=134.7
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.+ +|+|+++|+||||.|+. +.+.
T Consensus 108 ~~~L~~-~~~via~Dl~G~G~S~~---------------~~~~------------------------------------- 134 (360)
T PLN02679 108 IGVLAK-NYTVYAIDLLGFGASDK---------------PPGF------------------------------------- 134 (360)
T ss_pred HHHHhc-CCEEEEECCCCCCCCCC---------------CCCc-------------------------------------
Confidence 456766 59999999999999987 3210
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHH-hCCCccceEEEeeCCCCCcc----hhhhhh--hhH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVA-ENPGSVKSLTLLDTGIKPAL----PLFALN--LPL 154 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~-~~p~~v~~lvl~~~~~~~~~----~~~~~~--~~~ 154 (279)
.|+++++++++.++++++++++++||||||||.+++.++. .+|++|+++|++++...... ..+... .+.
T Consensus 135 ----~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~P~rV~~LVLi~~~~~~~~~~~~~~~~~~~~~~~ 210 (360)
T PLN02679 135 ----SYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACVIAASESTRDLVRGLVLLNCAGGMNNKAVVDDWRIKLLLPL 210 (360)
T ss_pred ----cccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHHHHHHhcChhhcCEEEEECCccccccccccchHHHhhhcch
Confidence 2579999999999999999999999999999999999887 47999999999998642111 111100 000
Q ss_pred --HHHhhhc-------------ChhHHHHHHHHhhc--cCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccc
Q 023683 155 --IRDFVLG-------------SSFGYQWLIRFCCM--KKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGS 217 (279)
Q Consensus 155 --~~~~~~~-------------~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (279)
....+.. ....+..++..... ..++++..+.+.................... ...+...
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~ 286 (360)
T PLN02679 211 LWLIDFLLKQRGIASALFNRVKQRDNLKNILLSVYGNKEAVDDELVEIIRGPADDEGALDAFVSIVTGP----PGPNPIK 286 (360)
T ss_pred HHHHHHHhhchhhHHHHHHHhcCHHHHHHHHHHhccCcccCCHHHHHHHHhhccCCChHHHHHHHHhcC----CCCCHHH
Confidence 0000000 00111111111111 1122222222222222222222222211110 0111122
Q ss_pred cccccCCCEEEEeeCCCCcccch-----hHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 218 SEGIKGIPMQILWSSVWSKEWSE-----EGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 218 ~~~~~~~Pvlii~G~~d~~~~~~-----~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
....+++|+|+|+|++|...+.+ ..+.+.+.+|+++++++ ++||++++|+|++|++.|.+||
T Consensus 287 ~l~~i~~PtLii~G~~D~~~p~~~~~~~~~~~l~~~ip~~~l~~i~~aGH~~~~E~Pe~~~~~I~~FL 354 (360)
T PLN02679 287 LIPRISLPILVLWGDQDPFTPLDGPVGKYFSSLPSQLPNVTLYVLEGVGHCPHDDRPDLVHEKLLPWL 354 (360)
T ss_pred HhhhcCCCEEEEEeCCCCCcCchhhHHHHHHhhhccCCceEEEEcCCCCCCccccCHHHHHHHHHHHH
Confidence 34568899999999987555443 23457777899999999 6999999999999999999985
No 12
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.94 E-value=5.9e-26 Score=186.28 Aligned_cols=210 Identities=11% Similarity=0.018 Sum_probs=128.7
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.++ |+|+++|+||||.|+. +..
T Consensus 33 ~~~L~~~-~~vi~~Dl~G~G~S~~---------------~~~-------------------------------------- 58 (256)
T PRK10349 33 DEELSSH-FTLHLVDLPGFGRSRG---------------FGA-------------------------------------- 58 (256)
T ss_pred HHHHhcC-CEEEEecCCCCCCCCC---------------CCC--------------------------------------
Confidence 4567776 9999999999999977 321
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch-hhhh----hhhHHH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LFAL----NLPLIR 156 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~----~~~~~~ 156 (279)
++.+++++++.+ +..+++++|||||||.+++.+|.++|++|+++|++++.+..... .+.. ......
T Consensus 59 -----~~~~~~~~~l~~----~~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lili~~~~~~~~~~~~~~~~~~~~~~~~ 129 (256)
T PRK10349 59 -----LSLADMAEAVLQ----QAPDKAIWLGWSLGGLVASQIALTHPERVQALVTVASSPCFSARDEWPGIKPDVLAGFQ 129 (256)
T ss_pred -----CCHHHHHHHHHh----cCCCCeEEEEECHHHHHHHHHHHhChHhhheEEEecCccceecCCCCCcccHHHHHHHH
Confidence 357777776653 45789999999999999999999999999999999886432110 0000 000111
Q ss_pred Hhhh-cChhHHHHHHHHhh-ccCCCchhHHhHHHhh-cCcc-hhhhHHHHHhhcccccccccccccccccCCCEEEEeeC
Q 023683 157 DFVL-GSSFGYQWLIRFCC-MKKVGSFDVEDNRVLL-KGRD-RCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSS 232 (279)
Q Consensus 157 ~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~ 232 (279)
..+. .....+..++.... ...........+.... .... ............. ..+.......+++|+|+|+|+
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~P~lii~G~ 205 (256)
T PRK10349 130 QQLSDDFQRTVERFLALQTMGTETARQDARALKKTVLALPMPEVDVLNGGLEILK----TVDLRQPLQNVSMPFLRLYGY 205 (256)
T ss_pred HHHHhchHHHHHHHHHHHHccCchHHHHHHHHHHHhhccCCCcHHHHHHHHHHHH----hCccHHHHhhcCCCeEEEecC
Confidence 1111 11112222221111 1100111111111111 1110 0000000001000 111222345689999999999
Q ss_pred CCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhc
Q 023683 233 VWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 233 ~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~f 278 (279)
+|...+.+..+.+.+.+++++++++ ++||++++|+|++|++.|.+|
T Consensus 206 ~D~~~~~~~~~~~~~~i~~~~~~~i~~~gH~~~~e~p~~f~~~l~~~ 252 (256)
T PRK10349 206 LDGLVPRKVVPMLDKLWPHSESYIFAKAAHAPFISHPAEFCHLLVAL 252 (256)
T ss_pred CCccCCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHHH
Confidence 8766667888899999999999999 799999999999999999887
No 13
>PRK07581 hypothetical protein; Validated
Probab=99.94 E-value=2.1e-25 Score=190.35 Aligned_cols=187 Identities=11% Similarity=-0.013 Sum_probs=108.4
Q ss_pred HHHHHHH----HHHhcCCcc-EEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhh------
Q 023683 92 VGRVLGQ----VIDTFNLAP-VHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL------ 160 (279)
Q Consensus 92 ~~~~l~~----~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~------ 160 (279)
+++++.. +++++++++ ++||||||||++|+.+|.+||++|+++|++++............. .....+.
T Consensus 105 ~~~~~~~~~~~l~~~lgi~~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~~~~~~~~~~~-~~~~~l~~~~~~~ 183 (339)
T PRK07581 105 IYDNVRAQHRLLTEKFGIERLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAKTTPHNFVFLE-GLKAALTADPAFN 183 (339)
T ss_pred HHHHHHHHHHHHHHHhCCCceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCCCCHHHHHHHH-HHHHHHHhCCCCC
Confidence 4444443 778899999 589999999999999999999999999999887542211110000 0000000
Q ss_pred -------------cC-hhHH-----HHHHHHhhccCCC----chhHHhHHHhh-c--CcchhhhHHHHHhhcccccc---
Q 023683 161 -------------GS-SFGY-----QWLIRFCCMKKVG----SFDVEDNRVLL-K--GRDRCRAVSEMGRKLNNSFD--- 211 (279)
Q Consensus 161 -------------~~-~~~~-----~~~~~~~~~~~~~----~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~--- 211 (279)
.. ..+. ..++......... .+....+.... . .+......+...........
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 263 (339)
T PRK07581 184 GGWYAEPPERGLRAHARVYAGWGFSQAFYRQELWRAMGYASLEDFLVGFWEGNFLPRDPNNLLAMLWTWQRGDISRNPAY 263 (339)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHhHHHHHHhhhccccChhhHHHHHHHHHHHhhcccCcccHHHHHHHhhhcccccCccc
Confidence 00 0000 0001100000000 11111122111 1 11111111111111111100
Q ss_pred cccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-c-CCCCCCCcchHHHHHHHhhcC
Q 023683 212 MAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-S-GGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 212 ~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~-~gH~~~~e~p~~~~~~i~~fl 279 (279)
..+.......+++|+|+|+|++|...+.+..+.+.+.+|+++++++ + +||++++|+|+.++..|.+||
T Consensus 264 ~~d~~~~L~~I~~PtLvI~G~~D~~~p~~~~~~l~~~ip~a~l~~i~~~~GH~~~~~~~~~~~~~~~~~~ 333 (339)
T PRK07581 264 GGDLAAALGSITAKTFVMPISTDLYFPPEDCEAEAALIPNAELRPIESIWGHLAGFGQNPADIAFIDAAL 333 (339)
T ss_pred CCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEeCCCCCccccccCcHHHHHHHHHHH
Confidence 0122333556899999999998777777888899999999999999 5 899999999999999999885
No 14
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.93 E-value=4.8e-25 Score=188.86 Aligned_cols=223 Identities=18% Similarity=0.211 Sum_probs=136.6
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|++ +|+|+++|+||||.|+. |....
T Consensus 147 ~~~L~~-~~~Via~DlpG~G~S~~---------------p~~~~------------------------------------ 174 (383)
T PLN03084 147 LPVLSK-NYHAIAFDWLGFGFSDK---------------PQPGY------------------------------------ 174 (383)
T ss_pred HHHHhc-CCEEEEECCCCCCCCCC---------------Ccccc------------------------------------
Confidence 466766 49999999999999988 32110
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhc
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLG 161 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (279)
...|+++++++++.++++++++++++|||||+||.+++.+|.++|++|+++|+++++..............+...+..
T Consensus 175 --~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ia~~~a~~~P~~v~~lILi~~~~~~~~~~~p~~l~~~~~~l~~ 252 (383)
T PLN03084 175 --GFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSPPVVKYASAHPDKIKKLILLNPPLTKEHAKLPSTLSEFSNFLLG 252 (383)
T ss_pred --cccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHHHHHHHHHhChHhhcEEEEECCCCccccccchHHHHHHHHHHhh
Confidence 013689999999999999999999999999999999999999999999999999987532110000000000000000
Q ss_pred -----Ch-hHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHH-HHHhhccccc--cccccccc--ccccCCCEEEEe
Q 023683 162 -----SS-FGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVS-EMGRKLNNSF--DMAEWGSS--EGIKGIPMQILW 230 (279)
Q Consensus 162 -----~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~--~~~~~~Pvlii~ 230 (279)
.. ......+.......+..+....+...+..+....... ...+.+.... ........ ...+++|+++|+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~l~~~~r~~~~~l~~~~~~l~~~l~~~~i~vPvLiI~ 332 (383)
T PLN03084 253 EIFSQDPLRASDKALTSCGPYAMKEDDAMVYRRPYLTSGSSGFALNAISRSMKKELKKYIEEMRSILTDKNWKTPITVCW 332 (383)
T ss_pred hhhhcchHHHHhhhhcccCccCCCHHHHHHHhccccCCcchHHHHHHHHHHhhcccchhhHHHHhhhccccCCCCEEEEe
Confidence 00 0000001000011122333333333332222111111 1122211100 00011111 124689999999
Q ss_pred eCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 231 SSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 231 G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
|++|.....+..+.+++. ++++++++ +|||++++|+|+++++.|.+||
T Consensus 333 G~~D~~v~~~~~~~~a~~-~~a~l~vIp~aGH~~~~E~Pe~v~~~I~~Fl 381 (383)
T PLN03084 333 GLRDRWLNYDGVEDFCKS-SQHKLIELPMAGHHVQEDCGEELGGIISGIL 381 (383)
T ss_pred eCCCCCcCHHHHHHHHHh-cCCeEEEECCCCCCcchhCHHHHHHHHHHHh
Confidence 997655555667777776 57899999 7999999999999999999986
No 15
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.93 E-value=7.1e-25 Score=191.47 Aligned_cols=216 Identities=17% Similarity=0.084 Sum_probs=130.5
Q ss_pred cCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhcccccc
Q 023683 8 KKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVKVIEL 87 (279)
Q Consensus 8 ~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (279)
++|+|+++|+||||.|+. |.+. .|
T Consensus 231 ~~yrVia~Dl~G~G~S~~---------------p~~~-----------------------------------------~y 254 (481)
T PLN03087 231 STYRLFAVDLLGFGRSPK---------------PADS-----------------------------------------LY 254 (481)
T ss_pred CCCEEEEECCCCCCCCcC---------------CCCC-----------------------------------------cC
Confidence 579999999999999987 3220 25
Q ss_pred ChHHHHHHHH-HHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHH----hh-h-
Q 023683 88 GSDEVGRVLG-QVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRD----FV-L- 160 (279)
Q Consensus 88 ~~~~~~~~l~-~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~----~~-~- 160 (279)
+++++++++. .+++++++++++++||||||.+++.+|.+||++|+++|+++++................. .. .
T Consensus 255 tl~~~a~~l~~~ll~~lg~~k~~LVGhSmGG~iAl~~A~~~Pe~V~~LVLi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (481)
T PLN03087 255 TLREHLEMIERSVLERYKVKSFHIVAHSLGCILALALAVKHPGAVKSLTLLAPPYYPVPKGVQATQYVMRKVAPRRVWPP 334 (481)
T ss_pred CHHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHhChHhccEEEEECCCccccccchhHHHHHHHHhcccccCCc
Confidence 7999999995 899999999999999999999999999999999999999998643211100000000000 00 0
Q ss_pred -cChhHHHHHHHHhhcc-----CCCchhHHhHHHhhcCcchhhh------------HHHHHhhcccccc--ccc-ccccc
Q 023683 161 -GSSFGYQWLIRFCCMK-----KVGSFDVEDNRVLLKGRDRCRA------------VSEMGRKLNNSFD--MAE-WGSSE 219 (279)
Q Consensus 161 -~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~--~~~-~~~~~ 219 (279)
........++...... ...................... .......+..... ... .....
T Consensus 335 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~l~~~i~~~~~~l~~~l~~l~ 414 (481)
T PLN03087 335 IAFGASVACWYEHISRTICLVICKNHRLWEFLTRLLTRNRMRTFLIEGFFCHTHNAAWHTLHNIICGSGSKLDGYLDHVR 414 (481)
T ss_pred cccchhHHHHHHHHHhhhhcccccchHHHHHHHHHhhhhhhhHHHHHHHHhccchhhHHHHHHHHhchhhhhhhHHHHHH
Confidence 0000011111100000 0000001110000000000000 0000000000000 000 11112
Q ss_pred cccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCC-cchHHHHHHHhhcC
Q 023683 220 GIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQT-SRGRAHTRAYTEDV 279 (279)
Q Consensus 220 ~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~-e~p~~~~~~i~~fl 279 (279)
..+++|+|+|+|++|...+.+..+.+++.+|+++++++ ++||++++ |+|+++++.|.+|.
T Consensus 415 ~~I~vPtLII~Ge~D~ivP~~~~~~la~~iP~a~l~vI~~aGH~~~v~e~p~~fa~~L~~F~ 476 (481)
T PLN03087 415 DQLKCDVAIFHGGDDELIPVECSYAVKAKVPRARVKVIDDKDHITIVVGRQKEFARELEEIW 476 (481)
T ss_pred HhCCCCEEEEEECCCCCCCHHHHHHHHHhCCCCEEEEeCCCCCcchhhcCHHHHHHHHHHHh
Confidence 34789999999998877777899999999999999999 79999985 99999999999884
No 16
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.93 E-value=1.3e-24 Score=176.69 Aligned_cols=184 Identities=10% Similarity=0.002 Sum_probs=105.1
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCc-cceEEEeeCCCCCcchh-hhhhh---hHHHHhhhc-
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS-VKSLTLLDTGIKPALPL-FALNL---PLIRDFVLG- 161 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~~~~~~~-~~~~~---~~~~~~~~~- 161 (279)
+++++++++.+++++++++++++|||||||.+++.+|.++|+. |++++++++........ ..... ......+..
T Consensus 48 ~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~a~~~~~~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (242)
T PRK11126 48 GFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYYACQGLAGGLCGLIVEGGNPGLQNAEERQARWQNDRQWAQRFRQE 127 (242)
T ss_pred CHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCCcccccEEEEeCCCCCCCCHHHHHHHHhhhHHHHHHhccC
Confidence 5889999999999999999999999999999999999999765 99999998764221111 00000 000000000
Q ss_pred -ChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccch
Q 023683 162 -SSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSE 240 (279)
Q Consensus 162 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~ 240 (279)
....+..++...............+......... ......+...... ...........+++|+++|+|++|. ...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~l~~i~~P~lii~G~~D~--~~~ 203 (242)
T PRK11126 128 PLEQVLADWYQQPVFASLNAEQRQQLVAKRSNNNG-AAVAAMLEATSLA-KQPDLRPALQALTFPFYYLCGERDS--KFQ 203 (242)
T ss_pred cHHHHHHHHHhcchhhccCccHHHHHHHhcccCCH-HHHHHHHHhcCcc-cCCcHHHHhhccCCCeEEEEeCCcc--hHH
Confidence 0111111111111111222222222221111111 1111122111110 1112222345689999999999654 221
Q ss_pred hHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 241 EGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 241 ~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.+++. ++++++++ +|||++++|+|+++++.|.+|+
T Consensus 204 ---~~~~~-~~~~~~~i~~~gH~~~~e~p~~~~~~i~~fl 239 (242)
T PRK11126 204 ---ALAQQ-LALPLHVIPNAGHNAHRENPAAFAASLAQIL 239 (242)
T ss_pred ---HHHHH-hcCeEEEeCCCCCchhhhChHHHHHHHHHHH
Confidence 22333 37899999 6999999999999999999885
No 17
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.93 E-value=1.2e-25 Score=179.61 Aligned_cols=209 Identities=22% Similarity=0.227 Sum_probs=132.4
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|+ +||+|+++|+||||.|+. +.. ++
T Consensus 18 ~~~l~-~~~~v~~~d~~G~G~s~~---------------~~~-~~----------------------------------- 45 (228)
T PF12697_consen 18 AEALA-RGYRVIAFDLPGHGRSDP---------------PPD-YS----------------------------------- 45 (228)
T ss_dssp HHHHH-TTSEEEEEECTTSTTSSS---------------HSS-GS-----------------------------------
T ss_pred HHHHh-CCCEEEEEecCCcccccc---------------ccc-cC-----------------------------------
Confidence 45674 679999999999999998 321 10
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhh-hhhhhHHHHhhh
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLF-ALNLPLIRDFVL 160 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~ 160 (279)
.++++++++++.+++++++.++++++|||+||.+++.++.++|++|+++|++++......... ......+...+.
T Consensus 46 ----~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (228)
T PF12697_consen 46 ----PYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIALRLAARYPDRVKGLVLLSPPPPLPDSPSRSFGPSFIRRLLA 121 (228)
T ss_dssp ----GGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSSHHHHHCHHHHHHHHHHHHH
T ss_pred ----Ccchhhhhhhhhhcccccccccccccccccccccccccccccccccccceeecccccccccccccccchhhhhhhh
Confidence 257999999999999999999999999999999999999999999999999999875322110 000001111110
Q ss_pred cChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccch
Q 023683 161 GSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSE 240 (279)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~ 240 (279)
........+.................... .........+.. ............+++|+++++|++|.....+
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~~~~~~~~pvl~i~g~~D~~~~~~ 193 (228)
T PF12697_consen 122 WRSRSLRRLASRFFYRWFDGDEPEDLIRS-----SRRALAEYLRSN---LWQADLSEALPRIKVPVLVIHGEDDPIVPPE 193 (228)
T ss_dssp HHHHHHHHHHHHHHHHHHTHHHHHHHHHH-----HHHHHHHHHHHH---HHHHHHHHHHHGSSSEEEEEEETTSSSSHHH
T ss_pred ccccccccccccccccccccccccccccc-----cccccccccccc---cccccccccccccCCCeEEeecCCCCCCCHH
Confidence 00000000000000000111111111111 111111111110 0011111123446899999999987666668
Q ss_pred hHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHH
Q 023683 241 EGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRA 274 (279)
Q Consensus 241 ~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~ 274 (279)
..+.+.+..++++++++ ++||++++|+|++|+++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~a 228 (228)
T PF12697_consen 194 SAEELADKLPNAELVVIPGAGHFLFLEQPDEVAEA 228 (228)
T ss_dssp HHHHHHHHSTTEEEEEETTSSSTHHHHSHHHHHHH
T ss_pred HHHHHHHHCCCCEEEEECCCCCccHHHCHHHHhcC
Confidence 88999999999999999 59999999999999874
No 18
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.93 E-value=1.7e-24 Score=179.39 Aligned_cols=216 Identities=15% Similarity=0.189 Sum_probs=135.2
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|++. |+|+++|+||||.|+. +...
T Consensus 48 ~~~l~~~-~~vi~~D~~G~G~S~~---------------~~~~------------------------------------- 74 (278)
T TIGR03056 48 MPPLARS-FRVVAPDLPGHGFTRA---------------PFRF------------------------------------- 74 (278)
T ss_pred HHHHhhC-cEEEeecCCCCCCCCC---------------cccc-------------------------------------
Confidence 4567665 9999999999999987 3210
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhc
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLG 161 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (279)
.|+++++++++.++++++++++++|+||||||.+++.+|.++|++++++|++++.............+........
T Consensus 75 ----~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (278)
T TIGR03056 75 ----RFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIALRLALDGPVTPRMVVGINAALMPFEGMAGTLFPYMARVLAC 150 (278)
T ss_pred ----CCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHHHHHHhCCcccceEEEEcCcccccccccccccchhhHhhhh
Confidence 2579999999999999999999999999999999999999999999999999886432110000000000000000
Q ss_pred -------------ChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEE
Q 023683 162 -------------SSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQI 228 (279)
Q Consensus 162 -------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvli 228 (279)
....+..++.. .....+......+..................... ..........+++|+++
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~P~li 225 (278)
T TIGR03056 151 NPFTPPMMSRGAADQQRVERLIRD-TGSLLDKAGMTYYGRLIRSPAHVDGALSMMAQWD----LAPLNRDLPRITIPLHL 225 (278)
T ss_pred cccchHHHHhhcccCcchhHHhhc-cccccccchhhHHHHhhcCchhhhHHHHHhhccc----ccchhhhcccCCCCEEE
Confidence 00000000000 0000111111111111111111111111111100 11111124457899999
Q ss_pred EeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 229 LWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 229 i~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
|+|++|...+.+..+.+.+.+++++++.+ ++||++++|+|+++++.|.+|+
T Consensus 226 i~g~~D~~vp~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~f~ 277 (278)
T TIGR03056 226 IAGEEDKAVPPDESKRAATRVPTATLHVVPGGGHLVHEEQADGVVGLILQAA 277 (278)
T ss_pred EEeCCCcccCHHHHHHHHHhccCCeEEEECCCCCcccccCHHHHHHHHHHHh
Confidence 99998766666888999999999999999 6899999999999999999986
No 19
>PRK06489 hypothetical protein; Provisional
Probab=99.93 E-value=1.1e-24 Score=187.20 Aligned_cols=188 Identities=7% Similarity=-0.041 Sum_probs=110.1
Q ss_pred cChHHHHHHHHHH-HHhcCCccEE-EEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcc-hhhhhhh---hHHHHhh-
Q 023683 87 LGSDEVGRVLGQV-IDTFNLAPVH-LVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL-PLFALNL---PLIRDFV- 159 (279)
Q Consensus 87 ~~~~~~~~~l~~~-l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~---~~~~~~~- 159 (279)
|+++++++++..+ ++++++++++ |+||||||.+++.+|.++|++|+++|++++...... ..+.... .......
T Consensus 133 ~~~~~~a~~~~~~l~~~lgi~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~~~~~~~~~~~~~~~~~~~~~~~~ 212 (360)
T PRK06489 133 YDYDDMVEAQYRLVTEGLGVKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQPTEMSGRNWMWRRMLIESIRNDPA 212 (360)
T ss_pred ccHHHHHHHHHHHHHHhcCCCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCcccccHHHHHHHHHHHHHHHhCCC
Confidence 6799999998875 4889999986 899999999999999999999999999988642211 1111100 0000000
Q ss_pred ----h--cChhHHHHHHHH-----------hhccCCCchhHHhHHHh-hcCc--chhhhHHHHHhhcccccccccccccc
Q 023683 160 ----L--GSSFGYQWLIRF-----------CCMKKVGSFDVEDNRVL-LKGR--DRCRAVSEMGRKLNNSFDMAEWGSSE 219 (279)
Q Consensus 160 ----~--~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (279)
. .....+...... .............+... .... .............. ..+.....
T Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~d~~~~L 288 (360)
T PRK06489 213 WNNGNYTTQPPSLKRANPMFAIATSGGTLAYQAQAPTRAAADKLVDERLAAPVTADANDFLYQWDSSR----DYNPSPDL 288 (360)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHhCCHHHHHHhcCChHHHHHHHHHHHHhhhhcCHHHHHHHHHHhh----ccChHHHH
Confidence 0 000011111000 00000111111111111 1000 00111111111100 11112235
Q ss_pred cccCCCEEEEeeCCCCcccchhH--HHHHhhCCCCcEEEe-cC----CCCCCCcchHHHHHHHhhcC
Q 023683 220 GIKGIPMQILWSSVWSKEWSEEG--SRVADALPQAKFVGH-SG----GRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 220 ~~~~~Pvlii~G~~d~~~~~~~~--~~~~~~~~~~~~~~i-~~----gH~~~~e~p~~~~~~i~~fl 279 (279)
..+++|+|+|+|++|...+.+.. +.+++.+|+++++++ +| ||+++ |+|++|++.|.+||
T Consensus 289 ~~I~~PvLvI~G~~D~~~p~~~~~~~~la~~ip~a~l~~i~~a~~~~GH~~~-e~P~~~~~~i~~FL 354 (360)
T PRK06489 289 EKIKAPVLAINSADDERNPPETGVMEAALKRVKHGRLVLIPASPETRGHGTT-GSAKFWKAYLAEFL 354 (360)
T ss_pred HhCCCCEEEEecCCCcccChhhHHHHHHHHhCcCCeEEEECCCCCCCCcccc-cCHHHHHHHHHHHH
Confidence 56899999999998766666544 789999999999999 55 99997 89999999999985
No 20
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.93 E-value=1.3e-24 Score=185.64 Aligned_cols=187 Identities=10% Similarity=0.023 Sum_probs=111.0
Q ss_pred cChHHHHHHHHHHHHhcCCccE-EEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch--hhhhhhhHHHHhhhc--
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPV-HLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP--LFALNLPLIRDFVLG-- 161 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~-~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~~~~~~-- 161 (279)
|+.+++++++.+++++++++++ +||||||||++++.+|.+||++|+++|++++....... .+.............
T Consensus 118 ~~~~~~a~dl~~ll~~l~l~~~~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (343)
T PRK08775 118 IDTADQADAIALLLDALGIARLHAFVGYSYGALVGLQFASRHPARVRTLVVVSGAHRAHPYAAAWRALQRRAVALGQLQC 197 (343)
T ss_pred CCHHHHHHHHHHHHHHcCCCcceEEEEECHHHHHHHHHHHHChHhhheEEEECccccCCHHHHHHHHHHHHHHHcCCCCC
Confidence 4688899999999999999775 79999999999999999999999999999987543211 111000000000000
Q ss_pred -Ch---hHHHH-----------HHHHhhccC-C-C---chhHHhHHHh----hcCcchhhhHHHHHhhcccccccccccc
Q 023683 162 -SS---FGYQW-----------LIRFCCMKK-V-G---SFDVEDNRVL----LKGRDRCRAVSEMGRKLNNSFDMAEWGS 217 (279)
Q Consensus 162 -~~---~~~~~-----------~~~~~~~~~-~-~---~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (279)
.. ..... +........ . . ......+... .................. ....
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~------~~~~ 271 (343)
T PRK08775 198 AEKHGLALARQLAMLSYRTPEEFEERFDAPPEVINGRVRVAAEDYLDAAGAQYVARTPVNAYLRLSESID------LHRV 271 (343)
T ss_pred CchhHHHHHHHHHHHHcCCHHHHHHHhCCCccccCCCccchHHHHHHHHHHHHHHhcChhHHHHHHHHHh------hcCC
Confidence 00 00000 000000000 0 0 0000111100 000000001111111110 0111
Q ss_pred cccccCCCEEEEeeCCCCcccchhHHHHHhhC-CCCcEEEe-c-CCCCCCCcchHHHHHHHhhcC
Q 023683 218 SEGIKGIPMQILWSSVWSKEWSEEGSRVADAL-PQAKFVGH-S-GGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 218 ~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~-~~~~~~~i-~-~gH~~~~e~p~~~~~~i~~fl 279 (279)
....+++|+|+|+|++|...+.+..+.+.+.+ |+++++++ + +||++++|+|++|++.|.+||
T Consensus 272 ~l~~I~~PtLvi~G~~D~~~p~~~~~~~~~~i~p~a~l~~i~~~aGH~~~lE~Pe~~~~~l~~FL 336 (343)
T PRK08775 272 DPEAIRVPTVVVAVEGDRLVPLADLVELAEGLGPRGSLRVLRSPYGHDAFLKETDRIDAILTTAL 336 (343)
T ss_pred ChhcCCCCeEEEEeCCCEeeCHHHHHHHHHHcCCCCeEEEEeCCccHHHHhcCHHHHHHHHHHHH
Confidence 24568999999999977666667788888877 79999999 5 899999999999999999986
No 21
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.93 E-value=2.1e-24 Score=175.17 Aligned_cols=219 Identities=16% Similarity=0.052 Sum_probs=126.5
Q ss_pred hhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhc
Q 023683 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (279)
Q Consensus 3 ~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.|++. ++|+++|+||+|+|++|. .....+
T Consensus 111 ~~La~~-~~vyaiDllG~G~SSRP~-------------F~~d~~------------------------------------ 140 (365)
T KOG4409|consen 111 DDLAKI-RNVYAIDLLGFGRSSRPK-------------FSIDPT------------------------------------ 140 (365)
T ss_pred hhhhhc-CceEEecccCCCCCCCCC-------------CCCCcc------------------------------------
Confidence 567775 999999999999999941 000110
Q ss_pred cccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch-----------hhhhh
Q 023683 83 KVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-----------LFALN 151 (279)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-----------~~~~~ 151 (279)
-....+++.|++++.+.++++.+|||||+||+++..||.+||++|+.|||++|...+..+ .|...
T Consensus 141 ----~~e~~fvesiE~WR~~~~L~KmilvGHSfGGYLaa~YAlKyPerV~kLiLvsP~Gf~~~~~~~~~~~~~~~~w~~~ 216 (365)
T KOG4409|consen 141 ----TAEKEFVESIEQWRKKMGLEKMILVGHSFGGYLAAKYALKYPERVEKLILVSPWGFPEKPDSEPEFTKPPPEWYKA 216 (365)
T ss_pred ----cchHHHHHHHHHHHHHcCCcceeEeeccchHHHHHHHHHhChHhhceEEEecccccccCCCcchhhcCCChHHHhh
Confidence 135689999999999999999999999999999999999999999999999998543321 22100
Q ss_pred hhHH-----HHhhh-cC----hhHHHHHHHHh---hccCCCchhHHhHHHhhc--CcchhhhHHHHHhhccccccccccc
Q 023683 152 LPLI-----RDFVL-GS----SFGYQWLIRFC---CMKKVGSFDVEDNRVLLK--GRDRCRAVSEMGRKLNNSFDMAEWG 216 (279)
Q Consensus 152 ~~~~-----~~~~~-~~----~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (279)
.... +..+. .. ...+..+.... .+.....+.+-.|..... ++........++..... ......
T Consensus 217 ~~~~~~~~nPl~~LR~~Gp~Gp~Lv~~~~~d~~~k~~~~~~ed~l~~YiY~~n~~~psgE~~fk~l~~~~g~--Ar~Pm~ 294 (365)
T KOG4409|consen 217 LFLVATNFNPLALLRLMGPLGPKLVSRLRPDRFRKFPSLIEEDFLHEYIYHCNAQNPSGETAFKNLFEPGGW--ARRPMI 294 (365)
T ss_pred hhhhhhcCCHHHHHHhccccchHHHhhhhHHHHHhccccchhHHHHHHHHHhcCCCCcHHHHHHHHHhccch--hhhhHH
Confidence 0000 00000 00 01111111111 111122233233333221 12221111111111111 111111
Q ss_pred cccc--ccCCCEEEEeeCCC-CcccchhHHHHHh--hCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 217 SSEG--IKGIPMQILWSSVW-SKEWSEEGSRVAD--ALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 217 ~~~~--~~~~Pvlii~G~~d-~~~~~~~~~~~~~--~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+... ..++|+++|+|++| .|.. ...++.+ ....++.+++ ++||++.+|+|+.|++.+.+++
T Consensus 295 ~r~~~l~~~~pv~fiyG~~dWmD~~--~g~~~~~~~~~~~~~~~~v~~aGHhvylDnp~~Fn~~v~~~~ 361 (365)
T KOG4409|consen 295 QRLRELKKDVPVTFIYGDRDWMDKN--AGLEVTKSLMKEYVEIIIVPGAGHHVYLDNPEFFNQIVLEEC 361 (365)
T ss_pred HHHHhhccCCCEEEEecCcccccch--hHHHHHHHhhcccceEEEecCCCceeecCCHHHHHHHHHHHH
Confidence 1111 23699999999964 2222 2222222 2334788888 7999999999999999998764
No 22
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.92 E-value=1.6e-24 Score=177.10 Aligned_cols=215 Identities=16% Similarity=0.114 Sum_probs=133.4
Q ss_pred hhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhc
Q 023683 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (279)
Q Consensus 3 ~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.|.+ ||+|+++|+||||.|..+ +..
T Consensus 34 ~~l~~-~~~vi~~D~~G~G~S~~~--------------~~~--------------------------------------- 59 (257)
T TIGR03611 34 DVLTQ-RFHVVTYDHRGTGRSPGE--------------LPP--------------------------------------- 59 (257)
T ss_pred HHHHh-ccEEEEEcCCCCCCCCCC--------------Ccc---------------------------------------
Confidence 45554 599999999999999872 111
Q ss_pred cccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhh--
Q 023683 83 KVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL-- 160 (279)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-- 160 (279)
.|+++++++++.++++.++.++++++||||||.+++.++.++|++|+++|++++.......... ........+.
T Consensus 60 ---~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~~~a~~~~~~v~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~ 135 (257)
T TIGR03611 60 ---GYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGLQLALRYPERLLSLVLINAWSRPDPHTRR-CFDVRIALLQHA 135 (257)
T ss_pred ---cCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHHHHHHHChHHhHHheeecCCCCCChhHHH-HHHHHHHHHhcc
Confidence 2579999999999999999999999999999999999999999999999999986543211100 0000000000
Q ss_pred cChhHHHHHHHHhhc-cCCC---chhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCc
Q 023683 161 GSSFGYQWLIRFCCM-KKVG---SFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSK 236 (279)
Q Consensus 161 ~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~ 236 (279)
....+.......... ..+. ....+........................ .+.......+++|+++++|++|..
T Consensus 136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~i~~P~l~i~g~~D~~ 211 (257)
T TIGR03611 136 GPEAYVHAQALFLYPADWISENAARLAADEAHALAHFPGKANVLRRINALEA----FDVSARLDRIQHPVLLIANRDDML 211 (257)
T ss_pred CcchhhhhhhhhhccccHhhccchhhhhhhhhcccccCccHHHHHHHHHHHc----CCcHHHhcccCccEEEEecCcCcc
Confidence 000110000000000 0000 00000000000000011111111111111 011122445789999999998777
Q ss_pred ccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 237 EWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.+.+..+.+.+.+++++++.+ ++||++++++|+++++.|.+||
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~~i~~fl 255 (257)
T TIGR03611 212 VPYTQSLRLAAALPNAQLKLLPYGGHASNVTDPETFNRALLDFL 255 (257)
T ss_pred cCHHHHHHHHHhcCCceEEEECCCCCCccccCHHHHHHHHHHHh
Confidence 777888889999999999989 6999999999999999999986
No 23
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.92 E-value=7.2e-25 Score=187.62 Aligned_cols=212 Identities=14% Similarity=0.054 Sum_probs=128.6
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|++.||+|+++|+||||.|+. +.. +
T Consensus 108 ~~~l~~~g~~v~~~D~~G~G~S~~---------------~~~-~------------------------------------ 135 (349)
T PLN02385 108 ARKIASSGYGVFAMDYPGFGLSEG---------------LHG-Y------------------------------------ 135 (349)
T ss_pred HHHHHhCCCEEEEecCCCCCCCCC---------------CCC-C------------------------------------
Confidence 356777899999999999999987 321 0
Q ss_pred ccccccChHHHHHHHHHHHHhcCC------ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcc---hhhhhh-
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNL------APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL---PLFALN- 151 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~- 151 (279)
.++++++++++.++++.+.. .+++|+||||||.+++.++.++|++|+++|+++|...... +.+...
T Consensus 136 ----~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGhSmGG~val~~a~~~p~~v~glVLi~p~~~~~~~~~~~~~~~~ 211 (349)
T PLN02385 136 ----IPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQSMGGAVALKVHLKQPNAWDGAILVAPMCKIADDVVPPPLVLQ 211 (349)
T ss_pred ----cCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEeccchHHHHHHHHhCcchhhheeEecccccccccccCchHHHH
Confidence 12688899999988877653 2799999999999999999999999999999998743211 111000
Q ss_pred -hhHHHHhhhcChhHHHHHHHHhhccC-CCchhHHhHHH----hhcCcchhhhHHHHHhhcccccccccccccccccCCC
Q 023683 152 -LPLIRDFVLGSSFGYQWLIRFCCMKK-VGSFDVEDNRV----LLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIP 225 (279)
Q Consensus 152 -~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P 225 (279)
...+...+... .... ....... ........... .+............++.. .........+++|
T Consensus 212 ~~~~~~~~~p~~-~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~------~~~~~~l~~i~~P 281 (349)
T PLN02385 212 ILILLANLLPKA-KLVP---QKDLAELAFRDLKKRKMAEYNVIAYKDKPRLRTAVELLRTT------QEIEMQLEEVSLP 281 (349)
T ss_pred HHHHHHHHCCCc-eecC---CCccccccccCHHHHHHhhcCcceeCCCcchHHHHHHHHHH------HHHHHhcccCCCC
Confidence 00000000000 0000 0000000 00000000000 011111112222222211 1112224457899
Q ss_pred EEEEeeCCCCcccchhHHHHHhhC--CCCcEEEe-cCCCCCCCcchHH----HHHHHhhcC
Q 023683 226 MQILWSSVWSKEWSEEGSRVADAL--PQAKFVGH-SGGRWPQTSRGRA----HTRAYTEDV 279 (279)
Q Consensus 226 vlii~G~~d~~~~~~~~~~~~~~~--~~~~~~~i-~~gH~~~~e~p~~----~~~~i~~fl 279 (279)
+|+|+|++|...+.+..+.+.+.+ ++.+++++ ++||++++|+|++ +.+.|.+||
T Consensus 282 ~Lii~G~~D~vv~~~~~~~l~~~~~~~~~~l~~i~~~gH~l~~e~p~~~~~~v~~~i~~wL 342 (349)
T PLN02385 282 LLILHGEADKVTDPSVSKFLYEKASSSDKKLKLYEDAYHSILEGEPDEMIFQVLDDIISWL 342 (349)
T ss_pred EEEEEeCCCCccChHHHHHHHHHcCCCCceEEEeCCCeeecccCCChhhHHHHHHHHHHHH
Confidence 999999987777777888888877 56888889 6999999999987 777787775
No 24
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.92 E-value=4.3e-24 Score=172.91 Aligned_cols=211 Identities=13% Similarity=0.093 Sum_probs=128.7
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.+. |+|+++|+||||.|+. ..
T Consensus 24 ~~~l~~~-~~vi~~d~~G~G~s~~---------------~~--------------------------------------- 48 (245)
T TIGR01738 24 DEELSAH-FTLHLVDLPGHGRSRG---------------FG--------------------------------------- 48 (245)
T ss_pred HHhhccC-eEEEEecCCcCccCCC---------------CC---------------------------------------
Confidence 4566654 9999999999999976 21
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcc-hhhh--hh---hhHH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL-PLFA--LN---LPLI 155 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~--~~---~~~~ 155 (279)
.++++++++++.++++ ++++++||||||.+++.+|.++|++|+++|++++.+.... ..|. .. ...+
T Consensus 49 ----~~~~~~~~~~~~~~~~----~~~~lvG~S~Gg~~a~~~a~~~p~~v~~~il~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (245)
T TIGR01738 49 ----PLSLADAAEAIAAQAP----DPAIWLGWSLGGLVALHIAATHPDRVRALVTVASSPCFSAREDWPEGIKPDVLTGF 120 (245)
T ss_pred ----CcCHHHHHHHHHHhCC----CCeEEEEEcHHHHHHHHHHHHCHHhhheeeEecCCcccccCCcccccCCHHHHHHH
Confidence 1367788887765532 6999999999999999999999999999999988753211 1111 00 0000
Q ss_pred HHhhh-cChhHHHHHHHHh-hccCCCchhHHhHHHhhcCc--chhhhHHHHHhhcccccccccccccccccCCCEEEEee
Q 023683 156 RDFVL-GSSFGYQWLIRFC-CMKKVGSFDVEDNRVLLKGR--DRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWS 231 (279)
Q Consensus 156 ~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G 231 (279)
...+. .....+..+.... ................+... .........+..+. ..+.......+++|+++|+|
T Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~l~~i~~Pvlii~g 196 (245)
T TIGR01738 121 QQQLSDDYQRTIERFLALQTLGTPTARQDARALKQTLLARPTPNVQVLQAGLEILA----TVDLRQPLQNISVPFLRLYG 196 (245)
T ss_pred HHHhhhhHHHHHHHHHHHHHhcCCccchHHHHHHHHhhccCCCCHHHHHHHHHHhh----cccHHHHHhcCCCCEEEEee
Confidence 00010 0011111111111 11111111111111111110 10111111111111 11112224467899999999
Q ss_pred CCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 232 SVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 232 ~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
++|...+.+..+.+.+.+|+++++++ ++||++++|+|+++++.|.+|+
T Consensus 197 ~~D~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fi 245 (245)
T TIGR01738 197 YLDGLVPAKVVPYLDKLAPHSELYIFAKAAHAPFLSHAEAFCALLVAFK 245 (245)
T ss_pred cCCcccCHHHHHHHHHhCCCCeEEEeCCCCCCccccCHHHHHHHHHhhC
Confidence 98766666788888999999999999 6999999999999999999996
No 25
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.92 E-value=1.8e-23 Score=172.79 Aligned_cols=217 Identities=11% Similarity=0.037 Sum_probs=130.0
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.++||+|+++|+||||.|... +..
T Consensus 38 ~~~L~~~g~~vi~~dl~g~G~s~~~--------------~~~-------------------------------------- 65 (273)
T PLN02211 38 RCLMENSGYKVTCIDLKSAGIDQSD--------------ADS-------------------------------------- 65 (273)
T ss_pred HHHHHhCCCEEEEecccCCCCCCCC--------------ccc--------------------------------------
Confidence 4567777899999999999998651 111
Q ss_pred ccccccChHHHHHHHHHHHHhcC-CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcc-h---hhhhhhhHHH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFN-LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL-P---LFALNLPLIR 156 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~---~~~~~~~~~~ 156 (279)
.++++++++++.++++.++ .++++||||||||.++..++.++|++|+++|++++...... . .+....+.+.
T Consensus 66 ----~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v~~~~a~~~p~~v~~lv~~~~~~~~~g~~~~~~~~~~~~~~~ 141 (273)
T PLN02211 66 ----VTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLSVTQAIHRFPKKICLAVYVAATMLKLGFQTDEDMKDGVPDLS 141 (273)
T ss_pred ----CCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHHHHHHHHhChhheeEEEEeccccCCCCCCHHHHHhccccchh
Confidence 1478999999999999985 58999999999999999999999999999999988643211 0 0100000000
Q ss_pred HhhhcChhHHHHHHHHhhc-cCCCchhHHhHHH-h-hcC-cchhhh-HHHHHhhccc-ccccccccc-cccccCCCEEEE
Q 023683 157 DFVLGSSFGYQWLIRFCCM-KKVGSFDVEDNRV-L-LKG-RDRCRA-VSEMGRKLNN-SFDMAEWGS-SEGIKGIPMQIL 229 (279)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~-~~~-~~~~~~-~~~~~~~~~~-~~~~~~~~~-~~~~~~~Pvlii 229 (279)
... ..+......... ............. . +.. +..... .....+.-.. ......... .....++|+++|
T Consensus 142 ~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vP~l~I 217 (273)
T PLN02211 142 EFG----DVYELGFGLGPDQPPTSAIIKKEFRRKILYQMSPQEDSTLAAMLLRPGPILALRSARFEEETGDIDKVPRVYI 217 (273)
T ss_pred hhc----cceeeeeccCCCCCCceeeeCHHHHHHHHhcCCCHHHHHHHHHhcCCcCccccccccccccccccCccceEEE
Confidence 000 000000000000 0000000000000 0 111 000000 0000000000 000001111 112237999999
Q ss_pred eeCCCCcccchhHHHHHhhCCCCcEEEecCCCCCCCcchHHHHHHHhhc
Q 023683 230 WSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 230 ~G~~d~~~~~~~~~~~~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~f 278 (279)
.|++|...+.+..+.+.+.+++++++.+++||.+++++|+++++.|.++
T Consensus 218 ~g~~D~~ip~~~~~~m~~~~~~~~~~~l~~gH~p~ls~P~~~~~~i~~~ 266 (273)
T PLN02211 218 KTLHDHVVKPEQQEAMIKRWPPSQVYELESDHSPFFSTPFLLFGLLIKA 266 (273)
T ss_pred EeCCCCCCCHHHHHHHHHhCCccEEEEECCCCCccccCHHHHHHHHHHH
Confidence 9998888888999999999999998888999999999999999998764
No 26
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.91 E-value=3.1e-23 Score=168.12 Aligned_cols=219 Identities=16% Similarity=0.116 Sum_probs=132.6
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|+ +||+|+++|+||||.|+. +....
T Consensus 21 ~~~L~-~~~~v~~~d~~g~G~s~~---------------~~~~~------------------------------------ 48 (251)
T TIGR03695 21 IELLG-PHFRCLAIDLPGHGSSQS---------------PDEIE------------------------------------ 48 (251)
T ss_pred HHHhc-ccCeEEEEcCCCCCCCCC---------------CCccC------------------------------------
Confidence 45666 679999999999999987 32100
Q ss_pred ccccccChHHHHHH-HHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch-hhhh---hhhHHH
Q 023683 82 VKVIELGSDEVGRV-LGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LFAL---NLPLIR 156 (279)
Q Consensus 82 ~~~~~~~~~~~~~~-l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~---~~~~~~ 156 (279)
.+++++++++ +..+++.++.++++++||||||.+++.+|.++|++|++++++++....... .+.. ......
T Consensus 49 ----~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~ia~~~a~~~~~~v~~lil~~~~~~~~~~~~~~~~~~~~~~~~ 124 (251)
T TIGR03695 49 ----RYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRIALYYALQYPERVQGLILESGSPGLATEEERAARRQNDEQLA 124 (251)
T ss_pred ----hhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHHHHHHHHhCchheeeeEEecCCCCcCchHhhhhhhhcchhhh
Confidence 2468889998 788888888899999999999999999999999999999999886432211 0000 000001
Q ss_pred Hhhh--cChhHHHHHHHHhhcc---CCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEee
Q 023683 157 DFVL--GSSFGYQWLIRFCCMK---KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWS 231 (279)
Q Consensus 157 ~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G 231 (279)
..+. ....+...+....... ..+......+........ .............. ...........+++|+++|+|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~l~i~g 202 (251)
T TIGR03695 125 QRFEQEGLEAFLDDWYQQPLFASQKNLPPEQRQALRAKRLANN-PEGLAKMLRATGLG-KQPSLWPKLQALTIPVLYLCG 202 (251)
T ss_pred hHHHhcCccHHHHHHhcCceeeecccCChHHhHHHHHhccccc-chHHHHHHHHhhhh-cccchHHHhhCCCCceEEEee
Confidence 1111 0111111111110000 022222222222111111 11111111111110 011111123457899999999
Q ss_pred CCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 232 SVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 232 ~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
++|... .+..+.+.+..++++++++ ++||++++|+|+++++.|.+||
T Consensus 203 ~~D~~~-~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~i~~~l 250 (251)
T TIGR03695 203 EKDEKF-VQIAKEMQKLLPNLTLVIIANAGHNIHLENPEAFAKILLAFL 250 (251)
T ss_pred CcchHH-HHHHHHHHhcCCCCcEEEEcCCCCCcCccChHHHHHHHHHHh
Confidence 975432 3566778888899999999 5899999999999999999986
No 27
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.91 E-value=3.6e-23 Score=171.66 Aligned_cols=217 Identities=12% Similarity=0.057 Sum_probs=129.5
Q ss_pred hhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhcc
Q 023683 4 SLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVK 83 (279)
Q Consensus 4 ~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
.|.+.||+|+++|+||||.|.. +....
T Consensus 48 ~l~~~g~~vi~~d~~G~G~s~~---------------~~~~~-------------------------------------- 74 (288)
T TIGR01250 48 LLKEEGREVIMYDQLGCGYSDQ---------------PDDSD-------------------------------------- 74 (288)
T ss_pred HHHhcCCEEEEEcCCCCCCCCC---------------CCccc--------------------------------------
Confidence 3445589999999999999987 32100
Q ss_pred ccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcCh
Q 023683 84 VIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSS 163 (279)
Q Consensus 84 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (279)
..++++++++++..++++++.++++++||||||.+++.+|.++|++|+++|++++.......... .......+. .
T Consensus 75 -~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~--~~~~~~~~~--~ 149 (288)
T TIGR01250 75 -ELWTIDYFVDELEEVREKLGLDKFYLLGHSWGGMLAQEYALKYGQHLKGLIISSMLDSAPEYVKE--LNRLRKELP--P 149 (288)
T ss_pred -ccccHHHHHHHHHHHHHHcCCCcEEEEEeehHHHHHHHHHHhCccccceeeEecccccchHHHHH--HHHHHhhcC--h
Confidence 01578999999999999999999999999999999999999999999999999886532211000 000000000 0
Q ss_pred hHHHHHHHHhhccCCCchhHHhHHHh-h-----cCcchhhhHH--------HHHhhcccc--------cccccccccccc
Q 023683 164 FGYQWLIRFCCMKKVGSFDVEDNRVL-L-----KGRDRCRAVS--------EMGRKLNNS--------FDMAEWGSSEGI 221 (279)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~~~~~--------~~~~~~~~~--------~~~~~~~~~~~~ 221 (279)
.......................... . .......... ..+..+... ....+.......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 229 (288)
T TIGR01250 150 EVRAAIKRCEASGDYDNPEYQEAVEVFYHHLLCRTRKWPEALKHLKSGMNTNVYNIMQGPNEFTITGNLKDWDITDKLSE 229 (288)
T ss_pred hHHHHHHHHHhccCcchHHHHHHHHHHHHHhhcccccchHHHHHHhhccCHHHHhcccCCccccccccccccCHHHHhhc
Confidence 00000000000000000000000000 0 0000000000 000000000 000011122345
Q ss_pred cCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 222 KGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+++|+++++|++|.. +.+..+.+.+.+++.+++++ ++||++++|+|+++++.|.+||
T Consensus 230 i~~P~lii~G~~D~~-~~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 287 (288)
T TIGR01250 230 IKVPTLLTVGEFDTM-TPEAAREMQELIAGSRLVVFPDGSHMTMIEDPEVYFKLLSDFI 287 (288)
T ss_pred cCCCEEEEecCCCcc-CHHHHHHHHHhccCCeEEEeCCCCCCcccCCHHHHHHHHHHHh
Confidence 789999999998753 34677888888999999988 6999999999999999999986
No 28
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.91 E-value=1.2e-23 Score=170.82 Aligned_cols=211 Identities=15% Similarity=0.160 Sum_probs=134.8
Q ss_pred hhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhc
Q 023683 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (279)
Q Consensus 3 ~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.|. +||+|+++|+||||.|+. +..
T Consensus 34 ~~l~-~~~~v~~~d~~G~G~s~~---------------~~~--------------------------------------- 58 (251)
T TIGR02427 34 PALT-PDFRVLRYDKRGHGLSDA---------------PEG--------------------------------------- 58 (251)
T ss_pred HHhh-cccEEEEecCCCCCCCCC---------------CCC---------------------------------------
Confidence 4554 469999999999999976 322
Q ss_pred cccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcc-hhhhhhhhHHHHhhh-
Q 023683 83 KVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL-PLFALNLPLIRDFVL- 160 (279)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~-~~~~~~~~~~~~~~~- 160 (279)
.++++++++++.++++.++.++++++||||||.+++.+|.++|++|+++|++++...... ..|.... .....
T Consensus 59 ---~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~~a~~~p~~v~~li~~~~~~~~~~~~~~~~~~---~~~~~~ 132 (251)
T TIGR02427 59 ---PYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQGLAARRPDRVRALVLSNTAAKIGTPESWNARI---AAVRAE 132 (251)
T ss_pred ---CCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHHHHHHCHHHhHHHhhccCccccCchhhHHHHH---hhhhhc
Confidence 257999999999999999999999999999999999999999999999999987643221 1111100 00000
Q ss_pred cChhHHHHHHHHhhccC---CCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcc
Q 023683 161 GSSFGYQWLIRFCCMKK---VGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKE 237 (279)
Q Consensus 161 ~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~ 237 (279)
.........+....... ........+...+.... ..........+. ..........+++|+++++|++|...
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~Pvlii~g~~D~~~ 207 (251)
T TIGR02427 133 GLAALADAVLERWFTPGFREAHPARLDLYRNMLVRQP-PDGYAGCCAAIR----DADFRDRLGAIAVPTLCIAGDQDGST 207 (251)
T ss_pred cHHHHHHHHHHHHcccccccCChHHHHHHHHHHHhcC-HHHHHHHHHHHh----cccHHHHhhhcCCCeEEEEeccCCcC
Confidence 00011111111111000 01111112222111111 001111111111 11111224457899999999987777
Q ss_pred cchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 238 WSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+.+..+.+.+.+++.+++++ ++||++++++|+++++.|.+|+
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~fl 250 (251)
T TIGR02427 208 PPELVREIADLVPGARFAEIRGAGHIPCVEQPEAFNAALRDFL 250 (251)
T ss_pred ChHHHHHHHHhCCCceEEEECCCCCcccccChHHHHHHHHHHh
Confidence 77888889999999999999 6999999999999999999986
No 29
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.91 E-value=1.6e-23 Score=179.47 Aligned_cols=192 Identities=13% Similarity=0.068 Sum_probs=116.0
Q ss_pred cChHHHHHHHHHHHHhcCCcc-EEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhh-c---
Q 023683 87 LGSDEVGRVLGQVIDTFNLAP-VHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL-G--- 161 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~--- 161 (279)
|+++++++++.++++++++++ ++|+||||||++++.+|.++|++|+++|++++..........+. ......+. .
T Consensus 107 ~~~~~~~~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 185 (351)
T TIGR01392 107 ITIRDDVKAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSARHSAWCIAFN-EVQRQAILADPNW 185 (351)
T ss_pred CcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCcCCHHHHHHH-HHHHHHHHhCCCC
Confidence 689999999999999999999 99999999999999999999999999999999764332110000 00000000 0
Q ss_pred -------C--h-hHH--HHHH-----------HHhhccCCCc-----------hhHHhHHH-----hhcC--cchhhhHH
Q 023683 162 -------S--S-FGY--QWLI-----------RFCCMKKVGS-----------FDVEDNRV-----LLKG--RDRCRAVS 200 (279)
Q Consensus 162 -------~--~-~~~--~~~~-----------~~~~~~~~~~-----------~~~~~~~~-----~~~~--~~~~~~~~ 200 (279)
. . ..+ ...+ .......... ...+.+.. .... ........
T Consensus 186 ~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 265 (351)
T TIGR01392 186 NDGDYYEDGQPDRGLALARMLAHLTYRSEESMAERFGRAPQSGESPASGFDTRFQVESYLRYQGDKFVDRFDANSYLYLT 265 (351)
T ss_pred CCCCCCCCCChhhHHHHHHHHHHHhcCCHHHHHHHhCcCcccccccccccCccchHHHHHHHHHHHHHhhcCcchHHHHH
Confidence 0 0 000 0000 0000000000 00111110 0000 11111111
Q ss_pred HHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEE-----Ee-cCCCCCCCcchHHHHHH
Q 023683 201 EMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFV-----GH-SGGRWPQTSRGRAHTRA 274 (279)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~-----~i-~~gH~~~~e~p~~~~~~ 274 (279)
..+..........+.......+++|+|+|+|++|...+.+..+.+++.+|+++++ ++ ++||++++|+|++|++.
T Consensus 266 ~~l~~~d~~~~~~~~~~~l~~I~~P~Lvi~G~~D~~~p~~~~~~~a~~i~~~~~~v~~~~i~~~~GH~~~le~p~~~~~~ 345 (351)
T TIGR01392 266 RALDTHDLGRGRGSLTEALSRIKAPFLVVSITSDWLFPPAESRELAKALPAAGLRVTYVEIESPYGHDAFLVETDQVEEL 345 (351)
T ss_pred HHHHhcCCcCCCCCHHHHHhhCCCCEEEEEeCCccccCHHHHHHHHHHHhhcCCceEEEEeCCCCCcchhhcCHHHHHHH
Confidence 1111111110011222345568999999999987777778899999999998865 45 59999999999999999
Q ss_pred HhhcC
Q 023683 275 YTEDV 279 (279)
Q Consensus 275 i~~fl 279 (279)
|.+||
T Consensus 346 l~~FL 350 (351)
T TIGR01392 346 IRGFL 350 (351)
T ss_pred HHHHh
Confidence 99996
No 30
>PHA02857 monoglyceride lipase; Provisional
Probab=99.91 E-value=1.2e-23 Score=174.43 Aligned_cols=212 Identities=12% Similarity=-0.014 Sum_probs=122.2
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.++||+|+++|+||||.|+.. ....
T Consensus 45 ~~~l~~~g~~via~D~~G~G~S~~~---------------~~~~------------------------------------ 73 (276)
T PHA02857 45 AENISSLGILVFSHDHIGHGRSNGE---------------KMMI------------------------------------ 73 (276)
T ss_pred HHHHHhCCCEEEEccCCCCCCCCCc---------------cCCc------------------------------------
Confidence 4678888999999999999999761 1100
Q ss_pred ccccccChHHHHHHHHHHHHh----cCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHH
Q 023683 82 VKVIELGSDEVGRVLGQVIDT----FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRD 157 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 157 (279)
.++.++++|+.+.++. ....+++|+||||||.+++.+|.++|++|+++|+++|........+. ..+..
T Consensus 74 -----~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~GG~ia~~~a~~~p~~i~~lil~~p~~~~~~~~~~---~~~~~ 145 (276)
T PHA02857 74 -----DDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMGATISILAAYKNPNLFTAMILMSPLVNAEAVPRL---NLLAA 145 (276)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCchHHHHHHHHHhCccccceEEEeccccccccccHH---HHHHH
Confidence 1344555555555543 34568999999999999999999999999999999987542211100 00000
Q ss_pred hhh---cChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchh--hhHHHHHhhcccccccccccccccccCCCEEEEeeC
Q 023683 158 FVL---GSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRC--RAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSS 232 (279)
Q Consensus 158 ~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~ 232 (279)
.+. ....... ............. .......+... .....+....... ..........+++|+|+|+|+
T Consensus 146 ~~~~~~~~~~~~~----~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~i~~Pvliv~G~ 218 (276)
T PHA02857 146 KLMGIFYPNKIVG----KLCPESVSRDMDE-VYKYQYDPLVNHEKIKAGFASQVLKA--TNKVRKIIPKIKTPILILQGT 218 (276)
T ss_pred HHHHHhCCCCccC----CCCHhhccCCHHH-HHHHhcCCCccCCCccHHHHHHHHHH--HHHHHHhcccCCCCEEEEecC
Confidence 000 0000000 0000000111001 00100010000 0000000000000 011122245688999999999
Q ss_pred CCCcccchhHHHHHhhC-CCCcEEEe-cCCCCCCCcch---HHHHHHHhhcC
Q 023683 233 VWSKEWSEEGSRVADAL-PQAKFVGH-SGGRWPQTSRG---RAHTRAYTEDV 279 (279)
Q Consensus 233 ~d~~~~~~~~~~~~~~~-~~~~~~~i-~~gH~~~~e~p---~~~~~~i~~fl 279 (279)
+|...+.+....+.+.+ ++.+++++ ++||.++.|++ +++.+.+.+||
T Consensus 219 ~D~i~~~~~~~~l~~~~~~~~~~~~~~~~gH~~~~e~~~~~~~~~~~~~~~l 270 (276)
T PHA02857 219 NNEISDVSGAYYFMQHANCNREIKIYEGAKHHLHKETDEVKKSVMKEIETWI 270 (276)
T ss_pred CCCcCChHHHHHHHHHccCCceEEEeCCCcccccCCchhHHHHHHHHHHHHH
Confidence 88777778888888876 46788888 69999999987 45777777775
No 31
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.90 E-value=4.7e-23 Score=172.92 Aligned_cols=191 Identities=18% Similarity=0.072 Sum_probs=111.5
Q ss_pred cChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEee---CCCCCcchhhhhhhhHHHHhhh---
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLD---TGIKPALPLFALNLPLIRDFVL--- 160 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~---~~~~~~~~~~~~~~~~~~~~~~--- 160 (279)
|+..++++.+..++......++++||||+||.+|+.+|+.+|+.|+++|+++ +........-......+.....
T Consensus 109 y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~va~~~Aa~~P~~V~~lv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (326)
T KOG1454|consen 109 YTLRELVELIRRFVKEVFVEPVSLVGHSLGGIVALKAAAYYPETVDSLVLLDLLGPPVYSTPKGIKGLRRLLDKFLSALE 188 (326)
T ss_pred eehhHHHHHHHHHHHhhcCcceEEEEeCcHHHHHHHHHHhCcccccceeeecccccccccCCcchhHHHHhhhhhccHhh
Confidence 6899999999999999999999999999999999999999999999999444 4432211110000000110000
Q ss_pred --c------ChhHHHHHHHHh-hcc-CCCchhHHhHHHhhcCcc----hhhhHHHHHhhcccccccccccccccc-cCCC
Q 023683 161 --G------SSFGYQWLIRFC-CMK-KVGSFDVEDNRVLLKGRD----RCRAVSEMGRKLNNSFDMAEWGSSEGI-KGIP 225 (279)
Q Consensus 161 --~------~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~P 225 (279)
. ....+...+... ... .......+........+. .......++...... .......... .++|
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i~~~p 266 (326)
T KOG1454|consen 189 LLIPLSLTEPVRLVSEGLLRCLKVVYTDPSRLLEKLLHLLSRPVKEHFHRDARLSLFLELLGF--DENLLSLIKKIWKCP 266 (326)
T ss_pred hcCccccccchhheeHhhhcceeeeccccccchhhhhhheecccccchhhhheeeEEEeccCc--cchHHHhhccccCCc
Confidence 0 000000000000 000 000111111111111110 000000010000000 0011112233 4599
Q ss_pred EEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 226 MQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 226 vlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+|+++|++|.-.+.+.+..+.+..|+++++++ +|||.+|+|+|+++++.|.+|+
T Consensus 267 vlii~G~~D~~~p~~~~~~~~~~~pn~~~~~I~~~gH~~h~e~Pe~~~~~i~~Fi 321 (326)
T KOG1454|consen 267 VLIIWGDKDQIVPLELAEELKKKLPNAELVEIPGAGHLPHLERPEEVAALLRSFI 321 (326)
T ss_pred eEEEEcCcCCccCHHHHHHHHhhCCCceEEEeCCCCcccccCCHHHHHHHHHHHH
Confidence 99999998777777889999999999999999 6999999999999999999985
No 32
>PRK10749 lysophospholipase L2; Provisional
Probab=99.90 E-value=4.8e-23 Score=174.97 Aligned_cols=223 Identities=13% Similarity=0.029 Sum_probs=126.1
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|.+.||+|+++|+||||.|+.+ ..... .|
T Consensus 74 ~~~l~~~g~~v~~~D~~G~G~S~~~---------------~~~~~----~~----------------------------- 105 (330)
T PRK10749 74 AYDLFHLGYDVLIIDHRGQGRSGRL---------------LDDPH----RG----------------------------- 105 (330)
T ss_pred HHHHHHCCCeEEEEcCCCCCCCCCC---------------CCCCC----cC-----------------------------
Confidence 3457788999999999999999872 11000 00
Q ss_pred ccccccChHHHHHHHHHHHHhc----CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCc--chhhhhhhhHH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTF----NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPA--LPLFALNLPLI 155 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~--~~~~~~~~~~~ 155 (279)
..++++++++++..+++.+ +..+++++||||||.+++.++.++|++|+++|+++|..... .+.+.. . .+
T Consensus 106 ---~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~-~-~~ 180 (330)
T PRK10749 106 ---HVERFNDYVDDLAAFWQQEIQPGPYRKRYALAHSMGGAILTLFLQRHPGVFDAIALCAPMFGIVLPLPSWMA-R-RI 180 (330)
T ss_pred ---ccccHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcHHHHHHHHHHHhCCCCcceEEEECchhccCCCCCcHHH-H-HH
Confidence 0136889999999988876 66899999999999999999999999999999999874321 111100 0 00
Q ss_pred HHhhhcC-------hhHHHHHHHHh-hccC--CCchhHHhHHHhhcCcchh---hhHHHHHhhccccccccccccccccc
Q 023683 156 RDFVLGS-------SFGYQWLIRFC-CMKK--VGSFDVEDNRVLLKGRDRC---RAVSEMGRKLNNSFDMAEWGSSEGIK 222 (279)
Q Consensus 156 ~~~~~~~-------~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (279)
...+... ........... .... ........+.+.+...... .....+....... ..........+
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~i 258 (330)
T PRK10749 181 LNWAEGHPRIRDGYAIGTGRWRPLPFAINVLTHSRERYRRNLRFYADDPELRVGGPTYHWVRESILA--GEQVLAGAGDI 258 (330)
T ss_pred HHHHHHhcCCCCcCCCCCCCCCCCCcCCCCCCCCHHHHHHHHHHHHhCCCcccCCCcHHHHHHHHHH--HHHHHhhccCC
Confidence 0000000 00000000000 0000 0111111122211111100 0011111110000 00011124457
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhC-------CCCcEEEe-cCCCCCCCcch---HHHHHHHhhcC
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADAL-------PQAKFVGH-SGGRWPQTSRG---RAHTRAYTEDV 279 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~-------~~~~~~~i-~~gH~~~~e~p---~~~~~~i~~fl 279 (279)
++|+|+|+|++|.....+..+.+.+.+ ++++++++ ++||.++.|.+ +.+.+.|.+||
T Consensus 259 ~~P~Lii~G~~D~vv~~~~~~~~~~~l~~~~~~~~~~~l~~~~gagH~~~~E~~~~r~~v~~~i~~fl 326 (330)
T PRK10749 259 TTPLLLLQAEEERVVDNRMHDRFCEARTAAGHPCEGGKPLVIKGAYHEILFEKDAMRSVALNAIVDFF 326 (330)
T ss_pred CCCEEEEEeCCCeeeCHHHHHHHHHHHhhcCCCCCCceEEEeCCCcchhhhCCcHHHHHHHHHHHHHH
Confidence 899999999987666667777777655 44578888 79999999987 45667777774
No 33
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.90 E-value=6.8e-23 Score=174.27 Aligned_cols=206 Identities=14% Similarity=0.016 Sum_probs=123.6
Q ss_pred hhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhc
Q 023683 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (279)
Q Consensus 3 ~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
..|.++||+|+++|+||||.|+. +...
T Consensus 81 ~~L~~~Gy~V~~~D~rGhG~S~~---------------~~~~-------------------------------------- 107 (330)
T PLN02298 81 IFLAQMGFACFALDLEGHGRSEG---------------LRAY-------------------------------------- 107 (330)
T ss_pred HHHHhCCCEEEEecCCCCCCCCC---------------cccc--------------------------------------
Confidence 45778899999999999999976 2110
Q ss_pred cccccChHHHHHHHHHHHHhcCC------ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcc---hhhhhhhh
Q 023683 83 KVIELGSDEVGRVLGQVIDTFNL------APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL---PLFALNLP 153 (279)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~l~~------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~---~~~~~~~~ 153 (279)
..+++++++|+..+++.+.. .+++|+||||||.+++.++.++|++|+++|++++...... +.+...
T Consensus 108 ---~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~GhSmGG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-- 182 (330)
T PLN02298 108 ---VPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGESMGGAICLLIHLANPEGFDGAVLVAPMCKISDKIRPPWPIP-- 182 (330)
T ss_pred ---CCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEecchhHHHHHHHhcCcccceeEEEecccccCCcccCCchHHH--
Confidence 12578889999888887643 3799999999999999999999999999999998743211 011000
Q ss_pred HHHHhhhcChhHHHHHHHHhh---cc-CCC----chhHHhHHH--h--hcCcchhhhHHHHHhhcccccccccccccccc
Q 023683 154 LIRDFVLGSSFGYQWLIRFCC---MK-KVG----SFDVEDNRV--L--LKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGI 221 (279)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~---~~-~~~----~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (279)
.... ++..+..... .. ... ......... . +.............+.. .........
T Consensus 183 ~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~l~~ 249 (330)
T PLN02298 183 QILT-------FVARFLPTLAIVPTADLLEKSVKVPAKKIIAKRNPMRYNGKPRLGTVVELLRVT------DYLGKKLKD 249 (330)
T ss_pred HHHH-------HHHHHCCCCccccCCCcccccccCHHHHHHHHhCccccCCCccHHHHHHHHHHH------HHHHHhhhh
Confidence 0000 0000000000 00 000 000000000 0 00000001111111110 011122445
Q ss_pred cCCCEEEEeeCCCCcccchhHHHHHhhC--CCCcEEEe-cCCCCCCCcchHH----HHHHHhhcC
Q 023683 222 KGIPMQILWSSVWSKEWSEEGSRVADAL--PQAKFVGH-SGGRWPQTSRGRA----HTRAYTEDV 279 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~~~~~~~~~~~--~~~~~~~i-~~gH~~~~e~p~~----~~~~i~~fl 279 (279)
+++|+|+|+|++|...+.+..+.+.+.+ ++.+++++ ++||.+++++|+. +.+.|.+||
T Consensus 250 i~~PvLii~G~~D~ivp~~~~~~l~~~i~~~~~~l~~~~~a~H~~~~e~pd~~~~~~~~~i~~fl 314 (330)
T PLN02298 250 VSIPFIVLHGSADVVTDPDVSRALYEEAKSEDKTIKIYDGMMHSLLFGEPDENIEIVRRDILSWL 314 (330)
T ss_pred cCCCEEEEecCCCCCCCHHHHHHHHHHhccCCceEEEcCCcEeeeecCCCHHHHHHHHHHHHHHH
Confidence 7899999999987777778888887776 46788888 6899999999875 455566663
No 34
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.89 E-value=2.4e-22 Score=173.62 Aligned_cols=192 Identities=11% Similarity=0.073 Sum_probs=114.6
Q ss_pred cChHHHHHHHHHHHHhcCCcc-EEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhh-----
Q 023683 87 LGSDEVGRVLGQVIDTFNLAP-VHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL----- 160 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~----- 160 (279)
|+++++++++.++++++++++ ++++||||||.+++.+|.++|++|+++|++++..........+.. .....+.
T Consensus 127 ~~~~~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~-~~~~~i~~~~~~ 205 (379)
T PRK00175 127 ITIRDWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSARLSAQNIAFNE-VARQAILADPDW 205 (379)
T ss_pred CCHHHHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcccCHHHHHHHH-HHHHHHHhCCCC
Confidence 689999999999999999999 589999999999999999999999999999987643321110000 0000000
Q ss_pred --------cChh----HHHHH-----------HHHhhccCC-Cc---------hhHHhHHH-----hhc--CcchhhhHH
Q 023683 161 --------GSSF----GYQWL-----------IRFCCMKKV-GS---------FDVEDNRV-----LLK--GRDRCRAVS 200 (279)
Q Consensus 161 --------~~~~----~~~~~-----------~~~~~~~~~-~~---------~~~~~~~~-----~~~--~~~~~~~~~ 200 (279)
+... .+... +........ .. .....+.. ... .........
T Consensus 206 ~~g~~~~~~~~~~~~~~~~r~~~~~~~~s~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~ 285 (379)
T PRK00175 206 HGGDYYEHGVVPERGLAVARMIGHITYLSDDELDEKFGRELQSGELPFGFDVEFQVESYLRYQGDKFVERFDANSYLYLT 285 (379)
T ss_pred CCCCcccCCCChhHHHHHHHHHHHHHhcCHHHHHhhcCccccccccccCCCccchHHHHHHHHHHHHhhccCchHHHHHH
Confidence 0000 00000 000000000 00 01111110 000 011111111
Q ss_pred HHHhhccccc-ccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCC----cEEEe--cCCCCCCCcchHHHHH
Q 023683 201 EMGRKLNNSF-DMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA----KFVGH--SGGRWPQTSRGRAHTR 273 (279)
Q Consensus 201 ~~~~~~~~~~-~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~----~~~~i--~~gH~~~~e~p~~~~~ 273 (279)
.......... ...+.......+++|+|+|+|++|...+.+..+.+++.++++ +++++ ++||++++|+|++|++
T Consensus 286 ~~~~~~d~~~~~~~d~~~~l~~I~~PtLvI~G~~D~~~p~~~~~~la~~i~~a~~~~~l~~i~~~~GH~~~le~p~~~~~ 365 (379)
T PRK00175 286 RALDYFDPARGRGGDLAAALARIKARFLVVSFTSDWLFPPARSREIVDALLAAGADVSYAEIDSPYGHDAFLLDDPRYGR 365 (379)
T ss_pred HHHHhccccCCCCCCHHHHHhcCCCCEEEEEECCccccCHHHHHHHHHHHHhcCCCeEEEEeCCCCCchhHhcCHHHHHH
Confidence 1111111100 001122335568999999999987777778888999999887 66666 5999999999999999
Q ss_pred HHhhcC
Q 023683 274 AYTEDV 279 (279)
Q Consensus 274 ~i~~fl 279 (279)
.|.+||
T Consensus 366 ~L~~FL 371 (379)
T PRK00175 366 LVRAFL 371 (379)
T ss_pred HHHHHH
Confidence 999986
No 35
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.89 E-value=4.3e-23 Score=165.98 Aligned_cols=192 Identities=13% Similarity=0.121 Sum_probs=111.8
Q ss_pred ccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC--CCc--chhhhh--hhhHHHHhh
Q 023683 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI--KPA--LPLFAL--NLPLIRDFV 159 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~--~~~--~~~~~~--~~~~~~~~~ 159 (279)
+|+.+++++++..++++++.++++++||||||.+++.+|+++|++|+++|++++.. ... ...+.. .........
T Consensus 24 ~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (230)
T PF00561_consen 24 DYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPPPDLPDGLWNRIWPRGNLQGQLLDNF 103 (230)
T ss_dssp THCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESESSHHHHHHHHHCHHHHHHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeeeccchhhhhHHHHhhhhhhhhHHHhh
Confidence 36899999999999999999999999999999999999999999999999999963 000 000000 000000000
Q ss_pred hc-----ChhHHHHHHHHh-hc-cC-CCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEee
Q 023683 160 LG-----SSFGYQWLIRFC-CM-KK-VGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWS 231 (279)
Q Consensus 160 ~~-----~~~~~~~~~~~~-~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G 231 (279)
.. ............ .. .. ............................................+++|+++++|
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~p~l~i~~ 183 (230)
T PF00561_consen 104 FNFLSDPIKPLLGRWPKQFFAYDREFVEDFLKQFQSQQYARFAETDAFDNMFWNALGYFSVWDPSPALSNIKVPTLIIWG 183 (230)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHTTTTSEEEEEEE
T ss_pred hccccccchhhhhhhhhheeeccCccccchhhccchhhhhHHHHHHHHhhhccccccccccccccccccccCCCeEEEEe
Confidence 00 000000000000 00 00 000000000000000000001111111000000011111124458999999999
Q ss_pred CCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhh
Q 023683 232 SVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTE 277 (279)
Q Consensus 232 ~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~ 277 (279)
++|...+.+....+.+.+|+.+.+++ ++||+.++++|+++++.|.+
T Consensus 184 ~~D~~~p~~~~~~~~~~~~~~~~~~~~~~GH~~~~~~~~~~~~~i~~ 230 (230)
T PF00561_consen 184 EDDPLVPPESSEQLAKLIPNSQLVLIEGSGHFAFLEGPDEFNEIIIK 230 (230)
T ss_dssp TTCSSSHHHHHHHHHHHSTTEEEEEETTCCSTHHHHSHHHHHHHHH-
T ss_pred CCCCCCCHHHHHHHHHhcCCCEEEECCCCChHHHhcCHHhhhhhhcC
Confidence 98888888888889999999999999 57999999999999998863
No 36
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=1.3e-21 Score=169.79 Aligned_cols=188 Identities=10% Similarity=0.006 Sum_probs=104.3
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch-hh---hhhh-h----HHHH---
Q 023683 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LF---ALNL-P----LIRD--- 157 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~---~~~~-~----~~~~--- 157 (279)
+.+++++.++++.+++++++|+||||||.+++.+|.++|++|+++|++++....... .+ .... . .+..
T Consensus 160 ~~~~~~i~~~~~~l~~~~~~lvGhS~GG~la~~~a~~~p~~v~~lvl~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (402)
T PLN02894 160 AWFIDSFEEWRKAKNLSNFILLGHSFGGYVAAKYALKHPEHVQHLILVGPAGFSSESDDKSEWLTKFRATWKGAVLNHLW 239 (402)
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHhCchhhcEEEEECCccccCCcchhHHHHhhcchhHHHHHHHHHh
Confidence 446788888889999999999999999999999999999999999999987432211 10 0000 0 0000
Q ss_pred -------hhh-cC----hhHHHHHHHHhhc-----cCCCchhHHhH---HH-hhcCcchhhhHHHHHhhccccccccccc
Q 023683 158 -------FVL-GS----SFGYQWLIRFCCM-----KKVGSFDVEDN---RV-LLKGRDRCRAVSEMGRKLNNSFDMAEWG 216 (279)
Q Consensus 158 -------~~~-~~----~~~~~~~~~~~~~-----~~~~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (279)
.+. .. ......+...... ..++.+....+ .. ...........+........ ....+..
T Consensus 240 ~~~~~p~~~~~~~gp~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 318 (402)
T PLN02894 240 ESNFTPQKIIRGLGPWGPNLVRRYTTARFGAHSTGDILSEEESKLLTDYVYHTLAAKASGELCLKYIFSFGA-FARKPLL 318 (402)
T ss_pred hcCCCHHHHHHhccchhHHHHHHHHHHHhhhcccccccCcchhhHHHHHHHHhhcCCCchHHHHHHhccCch-hhcchHh
Confidence 000 00 0011111111000 00111111111 11 11111111111112111100 0111222
Q ss_pred ccccccCCCEEEEeeCCCCcccchhHHHHHhhC-CCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 217 SSEGIKGIPMQILWSSVWSKEWSEEGSRVADAL-PQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 217 ~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~-~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.....+++|+++|+|++|...+ .....+.+.. +.++++++ ++||++++|+|++|++.|.+|+
T Consensus 319 ~~l~~I~vP~liI~G~~D~i~~-~~~~~~~~~~~~~~~~~~i~~aGH~~~~E~P~~f~~~l~~~~ 382 (402)
T PLN02894 319 ESASEWKVPTTFIYGRHDWMNY-EGAVEARKRMKVPCEIIRVPQGGHFVFLDNPSGFHSAVLYAC 382 (402)
T ss_pred hhcccCCCCEEEEEeCCCCCCc-HHHHHHHHHcCCCCcEEEeCCCCCeeeccCHHHHHHHHHHHH
Confidence 2345578999999999764332 4455555555 35788888 7999999999999999998763
No 37
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.87 E-value=5.3e-21 Score=165.22 Aligned_cols=186 Identities=17% Similarity=0.108 Sum_probs=107.4
Q ss_pred cChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhh-cChhH
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL-GSSFG 165 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~ 165 (279)
++++++++++.++++.++.++++++||||||.+++.+|..+|+++.++|++++..........+ ...... .....
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~~v~~lv~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 253 (371)
T PRK14875 178 GSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALRLAARAPQRVASLTLIAPAGLGPEINGDY----IDGFVAAESRRE 253 (371)
T ss_pred CCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHHHHHhCchheeEEEEECcCCcCcccchhH----HHHhhcccchhH
Confidence 3689999999999999999999999999999999999999999999999998864321100000 000000 00011
Q ss_pred HHHHHHHhhc--cCCCchhHHhHHHhhcCcchhhhHHHHHhh-cccccccccccccccccCCCEEEEeeCCCCcccchhH
Q 023683 166 YQWLIRFCCM--KKVGSFDVEDNRVLLKGRDRCRAVSEMGRK-LNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEG 242 (279)
Q Consensus 166 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~ 242 (279)
+...+..... .............................. +........+......+++|+++++|++|...+.+..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~Pvlii~g~~D~~vp~~~~ 333 (371)
T PRK14875 254 LKPVLELLFADPALVTRQMVEDLLKYKRLDGVDDALRALADALFAGGRQRVDLRDRLASLAIPVLVIWGEQDRIIPAAHA 333 (371)
T ss_pred HHHHHHHHhcChhhCCHHHHHHHHHHhccccHHHHHHHHHHHhccCcccchhHHHHHhcCCCCEEEEEECCCCccCHHHH
Confidence 1111111110 111111111111111111111111111111 1111011122222445789999999998765554444
Q ss_pred HHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 243 SRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 243 ~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+.+ .++.+++++ ++||++++++|+++++.|.+||
T Consensus 334 ~~l---~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 368 (371)
T PRK14875 334 QGL---PDGVAVHVLPGAGHMPQMEAAADVNRLLAEFL 368 (371)
T ss_pred hhc---cCCCeEEEeCCCCCChhhhCHHHHHHHHHHHh
Confidence 333 356788888 5999999999999999999986
No 38
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.87 E-value=4e-21 Score=190.24 Aligned_cols=190 Identities=9% Similarity=-0.011 Sum_probs=110.9
Q ss_pred cChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch-hhhhhhh---HHHHhhh--
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LFALNLP---LIRDFVL-- 160 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~~~~---~~~~~~~-- 160 (279)
|+++++++++..++++++.++++|+||||||.+++.++.++|++|+++|++++.+..... .+..... .....+.
T Consensus 1426 ~si~~~a~~l~~ll~~l~~~~v~LvGhSmGG~iAl~~A~~~P~~V~~lVlis~~p~~~~~~~~~~~~~~~~~~~~~l~~~ 1505 (1655)
T PLN02980 1426 LSVELVADLLYKLIEHITPGKVTLVGYSMGARIALYMALRFSDKIEGAVIISGSPGLKDEVARKIRSAKDDSRARMLIDH 1505 (1655)
T ss_pred CCHHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHhChHhhCEEEEECCCCccCchHHHHHHhhhhhHHHHHHHhh
Confidence 579999999999999999999999999999999999999999999999999875432111 1111000 0000000
Q ss_pred cChhHHHHHHHHhhccCC-CchhHHhHHH-hhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCccc
Q 023683 161 GSSFGYQWLIRFCCMKKV-GSFDVEDNRV-LLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEW 238 (279)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~ 238 (279)
+...+...++........ .......... .+.. .........+..+.... ..+.......+++|+|+|+|++|...
T Consensus 1506 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~-~~dl~~~L~~I~~PtLlI~Ge~D~~~- 1582 (1655)
T PLN02980 1506 GLEIFLENWYSGELWKSLRNHPHFNKIVASRLLH-KDVPSLAKLLSDLSIGR-QPSLWEDLKQCDTPLLLVVGEKDVKF- 1582 (1655)
T ss_pred hHHHHHHHhccHHHhhhhccCHHHHHHHHHHHhc-CCHHHHHHHHHHhhhcc-cchHHHHHhhCCCCEEEEEECCCCcc-
Confidence 001111111110000000 1111111111 1111 11111112222111110 11112235568899999999976533
Q ss_pred chhHHHHHhhCCC------------CcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 239 SEEGSRVADALPQ------------AKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 239 ~~~~~~~~~~~~~------------~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.+...++.+.+++ ++++++ +|||++++|+|+++++.|.+||
T Consensus 1583 ~~~a~~~~~~i~~a~~~~~~~~~~~a~lvvI~~aGH~~~lE~Pe~f~~~I~~FL 1636 (1655)
T PLN02980 1583 KQIAQKMYREIGKSKESGNDKGKEIIEIVEIPNCGHAVHLENPLPVIRALRKFL 1636 (1655)
T ss_pred HHHHHHHHHHccccccccccccccceEEEEECCCCCchHHHCHHHHHHHHHHHH
Confidence 2556667777665 478888 7999999999999999999985
No 39
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.86 E-value=1.4e-20 Score=158.31 Aligned_cols=191 Identities=9% Similarity=-0.070 Sum_probs=107.2
Q ss_pred cChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch-hhhh------hhh-HHHHh
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LFAL------NLP-LIRDF 158 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~~------~~~-~~~~~ 158 (279)
++.+++++++..+++++++++++++||||||.+++.++.++|++|+++|++++....... .|.. ..+ .....
T Consensus 76 ~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (306)
T TIGR01249 76 NTTWDLVADIEKLREKLGIKNWLVFGGSWGSTLALAYAQTHPEVVTGLVLRGIFLLREKEWSWFYEGGASMIYPDAWQRF 155 (306)
T ss_pred CCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHHHHHHHHHChHhhhhheeeccccCCHHHHHHHHhcchhhhCHHHHHHH
Confidence 468899999999999999999999999999999999999999999999999887542211 1110 000 00011
Q ss_pred hhc-----C-hhHHHHHHHHhhccCCCchhHHhHHH--------hhcCcch----------hhhHHHHHh---hcccc-c
Q 023683 159 VLG-----S-SFGYQWLIRFCCMKKVGSFDVEDNRV--------LLKGRDR----------CRAVSEMGR---KLNNS-F 210 (279)
Q Consensus 159 ~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~----------~~~~~~~~~---~~~~~-~ 210 (279)
... . ..+...+...... ........+.. ....... ....+.... ..... .
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (306)
T TIGR01249 156 MDSIPENERNEQLVNAYHDRLQS--GDEETKLAAAKAWVDWESTTLLRPINEIVSTAEDFKFSLAFARLENHYFVNKGFL 233 (306)
T ss_pred hhhCChhhhhccHHHHHHHHccC--CCHHHHHHHHHHHHHHhChhhcCCCCCccccccchHHHHHHHHHHHhHHHHhchh
Confidence 100 0 1122222111111 11111111100 0000000 000000000 00000 0
Q ss_pred c-ccccccccccc-CCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcc-hHHHHHHHhhcC
Q 023683 211 D-MAEWGSSEGIK-GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSR-GRAHTRAYTEDV 279 (279)
Q Consensus 211 ~-~~~~~~~~~~~-~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~-p~~~~~~i~~fl 279 (279)
. ...+......+ ++|+++|+|++|...+.+.++.+++.+++++++++ ++||.++.+. -+.+.+.+.+|+
T Consensus 234 ~~~~~~~~~~~~i~~~P~lii~g~~D~~~p~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~i~~~~~~~~ 306 (306)
T TIGR01249 234 DVENFILDNISKIRNIPTYIVHGRYDLCCPLQSAWALHKAFPEAELKVTNNAGHSAFDPNNLAALVHALETYL 306 (306)
T ss_pred cCchHHHHhhhhccCCCeEEEecCCCCCCCHHHHHHHHHhCCCCEEEEECCCCCCCCChHHHHHHHHHHHHhC
Confidence 0 00011112234 69999999998777777889999999999999999 6899987442 345566666654
No 40
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.86 E-value=5.5e-21 Score=158.90 Aligned_cols=216 Identities=16% Similarity=0.055 Sum_probs=126.4
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|...||.|+++|+||||.|.+. ......
T Consensus 54 a~~l~~~G~~V~~~D~RGhG~S~r~--------------~rg~~~----------------------------------- 84 (298)
T COG2267 54 ADDLAARGFDVYALDLRGHGRSPRG--------------QRGHVD----------------------------------- 84 (298)
T ss_pred HHHHHhCCCEEEEecCCCCCCCCCC--------------CcCCch-----------------------------------
Confidence 5678899999999999999999730 222221
Q ss_pred ccccccChHHHHHHHHHHHHhcC----CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFN----LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRD 157 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~ 157 (279)
+++++.+|+..+++... ..+++|+||||||.|++.++.+++..|+++||.+|...... +.........
T Consensus 85 ------~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSmGg~Ia~~~~~~~~~~i~~~vLssP~~~l~~--~~~~~~~~~~ 156 (298)
T COG2267 85 ------SFADYVDDLDAFVETIAEPDPGLPVFLLGHSMGGLIALLYLARYPPRIDGLVLSSPALGLGG--AILRLILARL 156 (298)
T ss_pred ------hHHHHHHHHHHHHHHHhccCCCCCeEEEEeCcHHHHHHHHHHhCCccccEEEEECccccCCh--hHHHHHHHHH
Confidence 47888899988888764 36899999999999999999999999999999999976543 1000000000
Q ss_pred hhhcChhHHHHH-HH---H-h-hcc--CCCchhHHhHHH-hhcCc--chhhhHHHHHhhcccccccccccccccccCCCE
Q 023683 158 FVLGSSFGYQWL-IR---F-C-CMK--KVGSFDVEDNRV-LLKGR--DRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPM 226 (279)
Q Consensus 158 ~~~~~~~~~~~~-~~---~-~-~~~--~~~~~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pv 226 (279)
.......+...+ +. . . ... ..+++..+.+.. ..... .............. .........+++|+
T Consensus 157 ~~~~~~~~~p~~~~~~~~~~~~~~~~~sr~~~~~~~~~~dP~~~~~~~~~~w~~~~~~a~~-----~~~~~~~~~~~~Pv 231 (298)
T COG2267 157 ALKLLGRIRPKLPVDSNLLEGVLTDDLSRDPAEVAAYEADPLIGVGGPVSRWVDLALLAGR-----VPALRDAPAIALPV 231 (298)
T ss_pred hcccccccccccccCcccccCcCcchhhcCHHHHHHHhcCCccccCCccHHHHHHHHHhhc-----ccchhccccccCCE
Confidence 000000000000 00 0 0 000 112233333332 11010 11111111111111 00111134478999
Q ss_pred EEEeeCCCCccc-chhHHHHHhh--CCCCcEEEe-cCCCCCCCcch---HHHHHHHhhcC
Q 023683 227 QILWSSVWSKEW-SEEGSRVADA--LPQAKFVGH-SGGRWPQTSRG---RAHTRAYTEDV 279 (279)
Q Consensus 227 lii~G~~d~~~~-~~~~~~~~~~--~~~~~~~~i-~~gH~~~~e~p---~~~~~~i~~fl 279 (279)
|+++|+.|.... .+...++.+. .++.+++++ ++.|.++.|.+ +++.+.+.+|+
T Consensus 232 Lll~g~~D~vv~~~~~~~~~~~~~~~~~~~~~~~~g~~He~~~E~~~~r~~~~~~~~~~l 291 (298)
T COG2267 232 LLLQGGDDRVVDNVEGLARFFERAGSPDKELKVIPGAYHELLNEPDRAREEVLKDILAWL 291 (298)
T ss_pred EEEecCCCccccCcHHHHHHHHhcCCCCceEEecCCcchhhhcCcchHHHHHHHHHHHHH
Confidence 999999776665 4555555444 466778888 79999988854 56777777664
No 41
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.86 E-value=3.7e-20 Score=159.14 Aligned_cols=192 Identities=9% Similarity=-0.022 Sum_probs=117.9
Q ss_pred cChHHHHHHHHHHHHhcCCccEE-EEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchh-hhhhhhHHHHhhhcC--
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVH-LVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPL-FALNLPLIRDFVLGS-- 162 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-~~~~~~~~~~~~~~~-- 162 (279)
||++++++++..+++++++++++ +|||||||++++.+|.+||++|+++|++++........ ..+ .....+.+...
T Consensus 141 ~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~~~~~~~~~-~~~~~~ai~~dp~ 219 (389)
T PRK06765 141 VTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQNDAWTSVNV-LQNWAEAIRLDPN 219 (389)
T ss_pred CcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCCChhHHHHH-HHHHHHHHHhCCC
Confidence 79999999999999999999997 99999999999999999999999999998875432211 000 00000101000
Q ss_pred -----------h----hHH----------HHHHHHhhccC----C-------CchhHHhHHHh----hcCcc---hhhhH
Q 023683 163 -----------S----FGY----------QWLIRFCCMKK----V-------GSFDVEDNRVL----LKGRD---RCRAV 199 (279)
Q Consensus 163 -----------~----~~~----------~~~~~~~~~~~----~-------~~~~~~~~~~~----~~~~~---~~~~~ 199 (279)
+ ... ..++....... . ....++.|... +.... .....
T Consensus 220 ~~~G~y~~~~~p~~Gl~~a~~~~~~~~~s~~~~~~~f~r~~~~~~~~~~~~~~~~~~e~yl~~~~~~~~~~~Dan~~l~l 299 (389)
T PRK06765 220 WKGGKYYGEEQPMKGLTLALRMMTMNAFDEHFYETTFPRNASIEVDPYEKVSTLTSFEKEINKATYRRAELVDANHWLYL 299 (389)
T ss_pred CCCCCCCCCCCchHHHHHHHHHHHHHcCCHHHHHHHcCcCccccccccccccchhhHHHHHHHHHHHhhhccChhhHHHH
Confidence 0 000 00111100000 0 00112222221 11111 11111
Q ss_pred HHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCC----CCcEEEe-c-CCCCCCCcchHHHHH
Q 023683 200 SEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALP----QAKFVGH-S-GGRWPQTSRGRAHTR 273 (279)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~----~~~~~~i-~-~gH~~~~e~p~~~~~ 273 (279)
...+..........+....+..+++|+|+|+|+.|...+.+..+.+.+.++ +++++++ + +||++++|+|+++++
T Consensus 300 ~~a~~~~d~g~~~~dl~~~L~~I~~PtLvI~G~~D~l~p~~~~~~la~~lp~~~~~a~l~~I~s~~GH~~~le~p~~~~~ 379 (389)
T PRK06765 300 AKAVQLFDAGHGFSSLEEALSNIEANVLMIPCKQDLLQPPRYNYKMVDILQKQGKYAEVYEIESINGHMAGVFDIHLFEK 379 (389)
T ss_pred HHHHHhcCCccccCCHHHHHhcCCCCEEEEEeCCCCCCCHHHHHHHHHHhhhcCCCeEEEEECCCCCcchhhcCHHHHHH
Confidence 122222221111112333455689999999999887777778888888885 6888888 4 799999999999999
Q ss_pred HHhhcC
Q 023683 274 AYTEDV 279 (279)
Q Consensus 274 ~i~~fl 279 (279)
.|.+||
T Consensus 380 ~I~~FL 385 (389)
T PRK06765 380 KIYEFL 385 (389)
T ss_pred HHHHHH
Confidence 999986
No 42
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.85 E-value=1.8e-20 Score=161.62 Aligned_cols=205 Identities=12% Similarity=0.015 Sum_probs=122.6
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.++||+|+++|+||||.|+. +.. +
T Consensus 156 a~~L~~~Gy~V~~~D~rGhG~S~~---------------~~~-~------------------------------------ 183 (395)
T PLN02652 156 AKQLTSCGFGVYAMDWIGHGGSDG---------------LHG-Y------------------------------------ 183 (395)
T ss_pred HHHHHHCCCEEEEeCCCCCCCCCC---------------CCC-C------------------------------------
Confidence 466888899999999999999987 211 1
Q ss_pred ccccccChHHHHHHHHHHHHhcCC----ccEEEEEeCcchHHHHHHHHhCCC---ccceEEEeeCCCCCcchhhhhhhhH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNL----APVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTGIKPALPLFALNLPL 154 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~~~~~~~~~~~~ 154 (279)
.++.+.+++|+..+++.+.. .+++++||||||.+++.++ .+|+ +|+++|+.+|............ .
T Consensus 184 ----~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmGG~ial~~a-~~p~~~~~v~glVL~sP~l~~~~~~~~~~--~ 256 (395)
T PLN02652 184 ----VPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTGGAVVLKAA-SYPSIEDKLEGIVLTSPALRVKPAHPIVG--A 256 (395)
T ss_pred ----CcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHHHHHHHHHH-hccCcccccceEEEECcccccccchHHHH--H
Confidence 12577788888888777542 4799999999999999876 4664 8999999988753221110000 0
Q ss_pred HHHhhhcChhHHHHHHHHh-----hcc--CCCchhHHhHHHhhcCcc----hh--hhHHHHHhhcccccccccccccccc
Q 023683 155 IRDFVLGSSFGYQWLIRFC-----CMK--KVGSFDVEDNRVLLKGRD----RC--RAVSEMGRKLNNSFDMAEWGSSEGI 221 (279)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (279)
+. ..+....... ... ..... .......+..+. .. .......+.. .........
T Consensus 257 ~~-------~l~~~~~p~~~~~~~~~~~~~~s~~-~~~~~~~~~dp~~~~g~i~~~~~~~~~~~~------~~l~~~L~~ 322 (395)
T PLN02652 257 VA-------PIFSLVAPRFQFKGANKRGIPVSRD-PAALLAKYSDPLVYTGPIRVRTGHEILRIS------SYLTRNFKS 322 (395)
T ss_pred HH-------HHHHHhCCCCcccCcccccCCcCCC-HHHHHHHhcCCCcccCCchHHHHHHHHHHH------HHHHhhccc
Confidence 00 0000000000 000 00100 001111111111 00 1111111110 011112445
Q ss_pred cCCCEEEEeeCCCCcccchhHHHHHhhCCC--CcEEEe-cCCCCCCCc-chHHHHHHHhhcC
Q 023683 222 KGIPMQILWSSVWSKEWSEEGSRVADALPQ--AKFVGH-SGGRWPQTS-RGRAHTRAYTEDV 279 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~--~~~~~i-~~gH~~~~e-~p~~~~~~i~~fl 279 (279)
+++|+|+++|++|...+.+..+.+.+..++ .+++++ +++|.+++| +++++.+.|.+||
T Consensus 323 I~vPvLIi~G~~D~vvp~~~a~~l~~~~~~~~k~l~~~~ga~H~l~~e~~~e~v~~~I~~FL 384 (395)
T PLN02652 323 VTVPFMVLHGTADRVTDPLASQDLYNEAASRHKDIKLYDGFLHDLLFEPEREEVGRDIIDWM 384 (395)
T ss_pred CCCCEEEEEeCCCCCCCHHHHHHHHHhcCCCCceEEEECCCeEEeccCCCHHHHHHHHHHHH
Confidence 789999999998877777888888777643 678888 689999777 7999999999985
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.83 E-value=9.5e-20 Score=166.34 Aligned_cols=59 Identities=15% Similarity=0.119 Sum_probs=52.2
Q ss_pred ccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEecCCCCCCCcchHHHHHHHhhcC
Q 023683 221 IKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 221 ~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.+++|+++|+|++|...+....+.+.+..++.+++++++||++++|+|+++++.|.+|+
T Consensus 231 ~~~~P~lii~G~~D~~v~~~~~~~~~~~~~~~~~~~~~~gH~~~~e~p~~~~~~i~~fl 289 (582)
T PRK05855 231 YTDVPVQLIVPTGDPYVRPALYDDLSRWVPRLWRREIKAGHWLPMSHPQVLAAAVAEFV 289 (582)
T ss_pred CccCceEEEEeCCCcccCHHHhccccccCCcceEEEccCCCcchhhChhHHHHHHHHHH
Confidence 47899999999987777777888888888988888889999999999999999999885
No 44
>PLN02511 hydrolase
Probab=99.82 E-value=1.6e-20 Score=162.37 Aligned_cols=61 Identities=13% Similarity=0.011 Sum_probs=47.4
Q ss_pred ccccCCCEEEEeeCCCCcccchhH-HHHHhhCCCCcEEEe-cCCCCCCCcchHH------HHHHHhhcC
Q 023683 219 EGIKGIPMQILWSSVWSKEWSEEG-SRVADALPQAKFVGH-SGGRWPQTSRGRA------HTRAYTEDV 279 (279)
Q Consensus 219 ~~~~~~Pvlii~G~~d~~~~~~~~-~~~~~~~~~~~~~~i-~~gH~~~~e~p~~------~~~~i~~fl 279 (279)
+..+++|+|+|+|++|...+.... ....+..|+++++++ +|||..++|+|+. +.+.+.+||
T Consensus 294 L~~I~vPtLiI~g~dDpi~p~~~~~~~~~~~~p~~~l~~~~~gGH~~~~E~p~~~~~~~w~~~~i~~Fl 362 (388)
T PLN02511 294 IKHVRVPLLCIQAANDPIAPARGIPREDIKANPNCLLIVTPSGGHLGWVAGPEAPFGAPWTDPVVMEFL 362 (388)
T ss_pred hccCCCCeEEEEcCCCCcCCcccCcHhHHhcCCCEEEEECCCcceeccccCCCCCCCCccHHHHHHHHH
Confidence 456899999999997654444433 456677899999998 6999999999976 477777774
No 45
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.82 E-value=1.8e-19 Score=149.03 Aligned_cols=203 Identities=16% Similarity=0.040 Sum_probs=111.6
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|+++||+|+++|+||||.|.. ..
T Consensus 50 a~~l~~~G~~v~~~Dl~G~G~S~~---------------~~--------------------------------------- 75 (274)
T TIGR03100 50 ARRLAEAGFPVLRFDYRGMGDSEG---------------EN--------------------------------------- 75 (274)
T ss_pred HHHHHHCCCEEEEeCCCCCCCCCC---------------CC---------------------------------------
Confidence 467888899999999999999876 21
Q ss_pred ccccccChHHHHHHHHHHHHhc-----CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhH-H
Q 023683 82 VKVIELGSDEVGRVLGQVIDTF-----NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPL-I 155 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~-~ 155 (279)
++++++.+|+.++++.+ +.++++++||||||.+++.+|.. +++|+++|+++|............... .
T Consensus 76 -----~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S~Gg~~a~~~a~~-~~~v~~lil~~p~~~~~~~~~~~~~~~~~ 149 (274)
T TIGR03100 76 -----LGFEGIDADIAAAIDAFREAAPHLRRIVAWGLCDAASAALLYAPA-DLRVAGLVLLNPWVRTEAAQAASRIRHYY 149 (274)
T ss_pred -----CCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHhhh-CCCccEEEEECCccCCcccchHHHHHHHH
Confidence 12444555555555443 56789999999999999999765 568999999998744221100000000 0
Q ss_pred HHhhhcChhHHHHHHHHhhccCCCch-hHHhHHHhhc---CcchhhhHHHHHhhcccccccccccccccccCCCEEEEee
Q 023683 156 RDFVLGSSFGYQWLIRFCCMKKVGSF-DVEDNRVLLK---GRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWS 231 (279)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G 231 (279)
.... ....++..+ .....+.. ..+.+...+. ............+ ........+++|+++++|
T Consensus 150 ~~~~-~~~~~~~~~----~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~l~~~~~P~ll~~g 215 (274)
T TIGR03100 150 LGQL-LSADFWRKL----LSGEVNLGSSLRGLGDALLKARQKGDEVAHGGLAE---------RMKAGLERFQGPVLFILS 215 (274)
T ss_pred HHHH-hChHHHHHh----cCCCccHHHHHHHHHHHHHhhhhcCCCcccchHHH---------HHHHHHHhcCCcEEEEEc
Confidence 0000 000111111 01111110 0111111000 0000000000000 011112345899999999
Q ss_pred CCCCcccchhH------HHHHhhC--CCCcEEEe-cCCCCCCCcc-hHHHHHHHhhcC
Q 023683 232 SVWSKEWSEEG------SRVADAL--PQAKFVGH-SGGRWPQTSR-GRAHTRAYTEDV 279 (279)
Q Consensus 232 ~~d~~~~~~~~------~~~~~~~--~~~~~~~i-~~gH~~~~e~-p~~~~~~i~~fl 279 (279)
..|... .... .++++.+ ++++++.+ +++|++..+. ++++.+.|.+||
T Consensus 216 ~~D~~~-~~~~~~~~~~~~~~~~l~~~~v~~~~~~~~~H~l~~e~~~~~v~~~i~~wL 272 (274)
T TIGR03100 216 GNDLTA-QEFADSVLGEPAWRGALEDPGIERVEIDGADHTFSDRVWREWVAARTTEWL 272 (274)
T ss_pred CcchhH-HHHHHHhccChhhHHHhhcCCeEEEecCCCCcccccHHHHHHHHHHHHHHH
Confidence 965332 1221 4455544 88888889 7999995555 589999999996
No 46
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.81 E-value=1.9e-18 Score=140.22 Aligned_cols=186 Identities=15% Similarity=0.098 Sum_probs=113.9
Q ss_pred cChHHHHHHHHHHHHhcC----CccEEEEEeCcch-HHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHh---
Q 023683 87 LGSDEVGRVLGQVIDTFN----LAPVHLVLHDSAL-PMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDF--- 158 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~----~~~~~lvGhS~Gg-~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~--- 158 (279)
++...+++|+..+++..+ ..+++++|||||| .+++..+...|+.+.++|+++-.+.............+..+
T Consensus 100 h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG~~~~m~~t~~~p~~~~rliv~D~sP~~~~~~~~e~~e~i~~m~~~ 179 (315)
T KOG2382|consen 100 HNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGGVKVAMAETLKKPDLIERLIVEDISPGGVGRSYGEYRELIKAMIQL 179 (315)
T ss_pred cCHHHHHHHHHHHHHHcccccccCCceecccCcchHHHHHHHHHhcCcccceeEEEecCCccCCcccchHHHHHHHHHhc
Confidence 468889999999999874 6799999999999 77788888999999999999887632111100000000000
Q ss_pred ------hhcChhHHHHHHHHhhccCCCchhHHhHHH-hhc---------CcchhhhHHHHHhhccccccccccccccccc
Q 023683 159 ------VLGSSFGYQWLIRFCCMKKVGSFDVEDNRV-LLK---------GRDRCRAVSEMGRKLNNSFDMAEWGSSEGIK 222 (279)
Q Consensus 159 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (279)
..++......+... ..+..+..+.. .+. -.........++..+.......+.. ....
T Consensus 180 d~~~~~~~~rke~~~~l~~~-----~~d~~~~~fi~~nl~~~~~~~s~~w~~nl~~i~~~~~~~~~~s~~~~l~--~~~~ 252 (315)
T KOG2382|consen 180 DLSIGVSRGRKEALKSLIEV-----GFDNLVRQFILTNLKKSPSDGSFLWRVNLDSIASLLDEYEILSYWADLE--DGPY 252 (315)
T ss_pred cccccccccHHHHHHHHHHH-----hcchHHHHHHHHhcCcCCCCCceEEEeCHHHHHHHHHHHHhhccccccc--cccc
Confidence 01111112211110 01111111111 111 0111222223332211110011111 1346
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEec-CCCCCCCcchHHHHHHHhhcC
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHS-GGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i~-~gH~~~~e~p~~~~~~i~~fl 279 (279)
+.||+++.|.++...+.+...++...+|++++++++ +|||+|.|+|++|.+.|.+|+
T Consensus 253 ~~pvlfi~g~~S~fv~~~~~~~~~~~fp~~e~~~ld~aGHwVh~E~P~~~~~~i~~Fl 310 (315)
T KOG2382|consen 253 TGPVLFIKGLQSKFVPDEHYPRMEKIFPNVEVHELDEAGHWVHLEKPEEFIESISEFL 310 (315)
T ss_pred ccceeEEecCCCCCcChhHHHHHHHhccchheeecccCCceeecCCHHHHHHHHHHHh
Confidence 799999999987777778899999999999999995 999999999999999999985
No 47
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=99.81 E-value=8.1e-20 Score=136.97 Aligned_cols=173 Identities=8% Similarity=-0.051 Sum_probs=109.9
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch-hhh-hhhhHHHHhhh-cChhH
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP-LFA-LNLPLIRDFVL-GSSFG 165 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~-~~~-~~~~~~~~~~~-~~~~~ 165 (279)
+..-+++...++++++.+++.++|+|-||..++..|+++++.|.++|+.+++...... ... -.+.....+.. ++..+
T Consensus 97 f~~Da~~avdLM~aLk~~~fsvlGWSdGgiTalivAak~~e~v~rmiiwga~ayvn~~~~ma~kgiRdv~kWs~r~R~P~ 176 (277)
T KOG2984|consen 97 FMKDAEYAVDLMEALKLEPFSVLGWSDGGITALIVAAKGKEKVNRMIIWGAAAYVNHLGAMAFKGIRDVNKWSARGRQPY 176 (277)
T ss_pred HHHhHHHHHHHHHHhCCCCeeEeeecCCCeEEEEeeccChhhhhhheeecccceecchhHHHHhchHHHhhhhhhhcchH
Confidence 4445677778999999999999999999999999999999999999999887532211 000 01111111111 00000
Q ss_pred HHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHH
Q 023683 166 YQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRV 245 (279)
Q Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~ 245 (279)
. .....+.....+.. .......+..+... .-.+....+++||+||++|++|.......+..+
T Consensus 177 e---------~~Yg~e~f~~~wa~------wvD~v~qf~~~~dG---~fCr~~lp~vkcPtli~hG~kDp~~~~~hv~fi 238 (277)
T KOG2984|consen 177 E---------DHYGPETFRTQWAA------WVDVVDQFHSFCDG---RFCRLVLPQVKCPTLIMHGGKDPFCGDPHVCFI 238 (277)
T ss_pred H---------HhcCHHHHHHHHHH------HHHHHHHHhhcCCC---chHhhhcccccCCeeEeeCCcCCCCCCCCccch
Confidence 0 00111111111110 01111111111111 112334667899999999997655555777788
Q ss_pred HhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 246 ADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 246 ~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
....+.++++++ +++|.+++..+++|+..+.+|+
T Consensus 239 ~~~~~~a~~~~~peGkHn~hLrya~eFnklv~dFl 273 (277)
T KOG2984|consen 239 PVLKSLAKVEIHPEGKHNFHLRYAKEFNKLVLDFL 273 (277)
T ss_pred hhhcccceEEEccCCCcceeeechHHHHHHHHHHH
Confidence 888899999999 7999999999999999999986
No 48
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.80 E-value=1.5e-18 Score=147.25 Aligned_cols=211 Identities=13% Similarity=0.053 Sum_probs=121.8
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|.++||+|+++|+||||.|+... ....+
T Consensus 67 ~~~l~~~G~~V~~~D~rGHG~S~~~~-------------~~~g~------------------------------------ 97 (332)
T TIGR01607 67 IENFNKNGYSVYGLDLQGHGESDGLQ-------------NLRGH------------------------------------ 97 (332)
T ss_pred HHHHHHCCCcEEEecccccCCCcccc-------------ccccc------------------------------------
Confidence 46788899999999999999998620 00000
Q ss_pred ccccccChHHHHHHHHHHHHhcC------------------------CccEEEEEeCcchHHHHHHHHhCCC--------
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFN------------------------LAPVHLVLHDSALPMSANWVAENPG-------- 129 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~------------------------~~~~~lvGhS~Gg~ia~~~a~~~p~-------- 129 (279)
-.+++++++|+.++++... -.|++|+||||||.+++.++..+++
T Consensus 98 ----~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~ 173 (332)
T TIGR01607 98 ----INCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKL 173 (332)
T ss_pred ----hhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhcccccccccc
Confidence 0157888888888876531 2479999999999999999876643
Q ss_pred ccceEEEeeCCCCCcc---h--hh--hhhhhHHHHhhhcChhHHHHHHHHh---hccCC--CchhHHhHHH-hhcC--cc
Q 023683 130 SVKSLTLLDTGIKPAL---P--LF--ALNLPLIRDFVLGSSFGYQWLIRFC---CMKKV--GSFDVEDNRV-LLKG--RD 194 (279)
Q Consensus 130 ~v~~lvl~~~~~~~~~---~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~--~~~~~~~~~~-~~~~--~~ 194 (279)
.++++|+++|...... + .+ ....+.+ .. +..+.... ..... ++...+.+.. .+.. ..
T Consensus 174 ~i~g~i~~s~~~~i~~~~~~~~~~~~~~~~~l~-~~-------~~~~~p~~~~~~~~~~~~~~~~~~~~~~Dp~~~~~~~ 245 (332)
T TIGR01607 174 NIKGCISLSGMISIKSVGSDDSFKFKYFYLPVM-NF-------MSRVFPTFRISKKIRYEKSPYVNDIIKFDKFRYDGGI 245 (332)
T ss_pred ccceEEEeccceEEecccCCCcchhhhhHHHHH-HH-------HHHHCCcccccCccccccChhhhhHHhcCccccCCcc
Confidence 5899999988742110 0 00 0000000 00 00010000 00001 1112222211 1111 11
Q ss_pred hhhhHHHHHhhcccccccccccccccc--cCCCEEEEeeCCCCcccchhHHHHHhhC--CCCcEEEe-cCCCCCCCcc-h
Q 023683 195 RCRAVSEMGRKLNNSFDMAEWGSSEGI--KGIPMQILWSSVWSKEWSEEGSRVADAL--PQAKFVGH-SGGRWPQTSR-G 268 (279)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~Pvlii~G~~d~~~~~~~~~~~~~~~--~~~~~~~i-~~gH~~~~e~-p 268 (279)
.......++...... ...... .++|+|+++|++|.....+..+.+.+.. ++.+++++ +++|.++.|. +
T Consensus 246 s~~~~~~l~~~~~~~------~~~~~~i~~~~P~Lii~G~~D~vv~~~~~~~~~~~~~~~~~~l~~~~g~~H~i~~E~~~ 319 (332)
T TIGR01607 246 TFNLASELIKATDTL------DCDIDYIPKDIPILFIHSKGDCVCSYEGTVSFYNKLSISNKELHTLEDMDHVITIEPGN 319 (332)
T ss_pred cHHHHHHHHHHHHHH------HhhHhhCCCCCCEEEEEeCCCCccCHHHHHHHHHhccCCCcEEEEECCCCCCCccCCCH
Confidence 112222222211110 001222 3799999999987666667777776654 56788888 6899999885 6
Q ss_pred HHHHHHHhhcC
Q 023683 269 RAHTRAYTEDV 279 (279)
Q Consensus 269 ~~~~~~i~~fl 279 (279)
+++.+.|.+||
T Consensus 320 ~~v~~~i~~wL 330 (332)
T TIGR01607 320 EEVLKKIIEWI 330 (332)
T ss_pred HHHHHHHHHHh
Confidence 88999999886
No 49
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.79 E-value=9.9e-18 Score=145.79 Aligned_cols=190 Identities=13% Similarity=0.043 Sum_probs=119.3
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|.++||.|+++|+||+|.|... +..
T Consensus 215 ~~~La~~Gy~vl~~D~pG~G~s~~~--------------~~~-------------------------------------- 242 (414)
T PRK05077 215 RDYLAPRGIAMLTIDMPSVGFSSKW--------------KLT-------------------------------------- 242 (414)
T ss_pred HHHHHhCCCEEEEECCCCCCCCCCC--------------Ccc--------------------------------------
Confidence 3568899999999999999999761 100
Q ss_pred ccccccChHHHHHHHHHHHHhc---CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcch--hhhhhhhHHH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALP--LFALNLPLIR 156 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~--~~~~~~~~~~ 156 (279)
.+...+...+.+++... +.+++.++||||||.+++.+|..+|++|+++|++++....... .+....+
T Consensus 243 -----~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~ri~a~V~~~~~~~~~~~~~~~~~~~p--- 314 (414)
T PRK05077 243 -----QDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPPRLKAVACLGPVVHTLLTDPKRQQQVP--- 314 (414)
T ss_pred -----ccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCcCceEEEEECCccchhhcchhhhhhch---
Confidence 12333444555555544 5578999999999999999999999999999999887532111 0100000
Q ss_pred HhhhcChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCc
Q 023683 157 DFVLGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSK 236 (279)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~ 236 (279)
......+..... ........+.. ....+.. .....+...+++|+|+|+|++|..
T Consensus 315 -------~~~~~~la~~lg--~~~~~~~~l~~-------------~l~~~sl----~~~~~l~~~i~~PvLiI~G~~D~i 368 (414)
T PRK05077 315 -------EMYLDVLASRLG--MHDASDEALRV-------------ELNRYSL----KVQGLLGRRCPTPMLSGYWKNDPF 368 (414)
T ss_pred -------HHHHHHHHHHhC--CCCCChHHHHH-------------Hhhhccc----hhhhhhccCCCCcEEEEecCCCCC
Confidence 000111111100 01001111111 1110100 000001235789999999998877
Q ss_pred ccchhHHHHHhhCCCCcEEEecCCCCCCCcchHHHHHHHhhcC
Q 023683 237 EWSEEGSRVADALPQAKFVGHSGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.+.+..+.+.+..+++++++++.. ++.+.++++...|.+||
T Consensus 369 vP~~~a~~l~~~~~~~~l~~i~~~--~~~e~~~~~~~~i~~wL 409 (414)
T PRK05077 369 SPEEDSRLIASSSADGKLLEIPFK--PVYRNFDKALQEISDWL 409 (414)
T ss_pred CCHHHHHHHHHhCCCCeEEEccCC--CccCCHHHHHHHHHHHH
Confidence 777888898999999999999643 57789999999999885
No 50
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=99.78 E-value=2e-18 Score=138.01 Aligned_cols=211 Identities=13% Similarity=0.027 Sum_probs=125.7
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|++.||.|+++|++|||.|+. ...-.
T Consensus 75 a~~l~~~g~~v~a~D~~GhG~SdG---------------l~~yi------------------------------------ 103 (313)
T KOG1455|consen 75 AKRLAKSGFAVYAIDYEGHGRSDG---------------LHAYV------------------------------------ 103 (313)
T ss_pred HHHHHhCCCeEEEeeccCCCcCCC---------------CcccC------------------------------------
Confidence 457889999999999999999998 21111
Q ss_pred ccccccChHHHHHHHHHHHHhc------CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCC---cchhhhh--
Q 023683 82 VKVIELGSDEVGRVLGQVIDTF------NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP---ALPLFAL-- 150 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~---~~~~~~~-- 150 (279)
-+++.+++|+..+.+.. ...+.+|+||||||+|++.++.++|+...++|+++|...- ..+.+..
T Consensus 104 -----~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~GeSMGGAV~Ll~~~k~p~~w~G~ilvaPmc~i~~~~kp~p~v~~ 178 (313)
T KOG1455|consen 104 -----PSFDLVVDDVISFFDSIKEREENKGLPRFLFGESMGGAVALLIALKDPNFWDGAILVAPMCKISEDTKPHPPVIS 178 (313)
T ss_pred -----CcHHHHHHHHHHHHHHHhhccccCCCCeeeeecCcchHHHHHHHhhCCcccccceeeecccccCCccCCCcHHHH
Confidence 14677777777776642 2347899999999999999999999999999999998431 1222211
Q ss_pred hhhHHHHhhhcChhHHHHHHHHh--hccC-CCchhHHhHHH-h--hcCcchhhhHHHHHhhcccccccccccccccccCC
Q 023683 151 NLPLIRDFVLGSSFGYQWLIRFC--CMKK-VGSFDVEDNRV-L--LKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGI 224 (279)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~-~~~~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (279)
..+.+...+..-. .+... .... .+++..+.... . +......+...++++... +.......+++
T Consensus 179 ~l~~l~~liP~wk-----~vp~~d~~~~~~kdp~~r~~~~~npl~y~g~pRl~T~~ElLr~~~------~le~~l~~vtv 247 (313)
T KOG1455|consen 179 ILTLLSKLIPTWK-----IVPTKDIIDVAFKDPEKRKILRSDPLCYTGKPRLKTAYELLRVTA------DLEKNLNEVTV 247 (313)
T ss_pred HHHHHHHhCCcee-----ecCCccccccccCCHHHHHHhhcCCceecCCccHHHHHHHHHHHH------HHHHhcccccc
Confidence 1111111111000 00000 0000 11122222211 1 112223344444444322 11222556899
Q ss_pred CEEEEeeCCCCcccchhHHHHHhhCCC--CcEEEec-CCCCCCC-c---chHHHHHHHhhcC
Q 023683 225 PMQILWSSVWSKEWSEEGSRVADALPQ--AKFVGHS-GGRWPQT-S---RGRAHTRAYTEDV 279 (279)
Q Consensus 225 Pvlii~G~~d~~~~~~~~~~~~~~~~~--~~~~~i~-~gH~~~~-e---~p~~~~~~i~~fl 279 (279)
|.+|+||+.|..+-....+.+.+..+. .++.+++ .-|.++. | +-+.|...|.+||
T Consensus 248 PflilHG~dD~VTDp~~Sk~Lye~A~S~DKTlKlYpGm~H~Ll~gE~~en~e~Vf~DI~~Wl 309 (313)
T KOG1455|consen 248 PFLILHGTDDKVTDPKVSKELYEKASSSDKTLKLYPGMWHSLLSGEPDENVEIVFGDIISWL 309 (313)
T ss_pred cEEEEecCCCcccCcHHHHHHHHhccCCCCceeccccHHHHhhcCCCchhHHHHHHHHHHHH
Confidence 999999997766666888888887754 4567774 6898875 3 2344555566664
No 51
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.78 E-value=2.5e-17 Score=145.69 Aligned_cols=212 Identities=14% Similarity=-0.021 Sum_probs=123.8
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|.++||+|+++|++|+|.|.. ... .
T Consensus 213 v~~L~~qGf~V~~iDwrgpg~s~~---------------~~~-~------------------------------------ 240 (532)
T TIGR01838 213 VRWLVEQGHTVFVISWRNPDASQA---------------DKT-F------------------------------------ 240 (532)
T ss_pred HHHHHHCCcEEEEEECCCCCcccc---------------cCC-h------------------------------------
Confidence 567888999999999999999876 211 0
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHH---H-HHHHhC-CCccceEEEeeCCCCCcch----hhhh--
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMS---A-NWVAEN-PGSVKSLTLLDTGIKPALP----LFAL-- 150 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia---~-~~a~~~-p~~v~~lvl~~~~~~~~~~----~~~~-- 150 (279)
.+|..+.+.+.+..+++.++.++++++||||||.++ + .+++.+ |++|++++++++.+....+ .+..
T Consensus 241 ---ddY~~~~i~~al~~v~~~~g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~rv~slvll~t~~Df~~~G~l~~f~~~~ 317 (532)
T TIGR01838 241 ---DDYIRDGVIAALEVVEAITGEKQVNCVGYCIGGTLLSTALAYLAARGDDKRIKSATFFTTLLDFSDPGELGVFVDEE 317 (532)
T ss_pred ---hhhHHHHHHHHHHHHHHhcCCCCeEEEEECcCcHHHHHHHHHHHHhCCCCccceEEEEecCcCCCCcchhhhhcCch
Confidence 025566788888888888999999999999999985 2 345565 7899999999998643321 1100
Q ss_pred hhhHHHHhhhcC------------------hhHHHHHHHHhhcc-CCCchhHHhHHHhhcCcchhhhHHHHHhhccccc-
Q 023683 151 NLPLIRDFVLGS------------------SFGYQWLIRFCCMK-KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSF- 210 (279)
Q Consensus 151 ~~~~~~~~~~~~------------------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 210 (279)
....+.+.+... ...+...+...... ......+..+.... ..-......++++.+....
T Consensus 318 ~~~~~e~~~~~~G~lpg~~m~~~F~~lrp~~l~w~~~v~~yl~g~~~~~fdll~Wn~D~-t~lP~~~~~~~lr~ly~~N~ 396 (532)
T TIGR01838 318 IVAGIERQNGGGGYLDGRQMAVTFSLLRENDLIWNYYVDNYLKGKSPVPFDLLFWNSDS-TNLPGKMHNFYLRNLYLQNA 396 (532)
T ss_pred hHHHHHHHHHhcCCCCHHHHHHHHHhcChhhHHHHHHHHHHhcCCCccchhHHHHhccC-ccchHHHHHHHHHHHHhcCC
Confidence 000011111100 01111112111111 00011111111000 0001111112222111110
Q ss_pred ------ccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchH
Q 023683 211 ------DMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGR 269 (279)
Q Consensus 211 ------~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~ 269 (279)
........+..+++|+++|+|++|...+.+.+..+.+.+++.+..++ ++||.+++++|.
T Consensus 397 L~~G~~~v~g~~~dL~~I~vPvLvV~G~~D~IvP~~sa~~l~~~i~~~~~~vL~~sGHi~~ienPp 462 (532)
T TIGR01838 397 LTTGGLEVCGVRLDLSKVKVPVYIIATREDHIAPWQSAYRGAALLGGPKTFVLGESGHIAGVVNPP 462 (532)
T ss_pred CcCCeeEECCEecchhhCCCCEEEEeeCCCCcCCHHHHHHHHHHCCCCEEEEECCCCCchHhhCCC
Confidence 11111223455899999999998877777888888999999888888 799999999985
No 52
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.77 E-value=1.7e-17 Score=142.07 Aligned_cols=222 Identities=13% Similarity=0.082 Sum_probs=123.9
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|.++||+|+++|++|+|.|+. ..+ ..
T Consensus 87 ~~~L~~~G~~V~~~D~~g~g~s~~---------------~~~-~~----------------------------------- 115 (350)
T TIGR01836 87 VRGLLERGQDVYLIDWGYPDRADR---------------YLT-LD----------------------------------- 115 (350)
T ss_pred HHHHHHCCCeEEEEeCCCCCHHHh---------------cCC-HH-----------------------------------
Confidence 467888999999999999998866 211 00
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchh-----hh--hhhhH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPL-----FA--LNLPL 154 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-----~~--~~~~~ 154 (279)
+|..+++.+.+..+++..+.++++++||||||.+++.+++.+|++|+++|+++++....... +. .....
T Consensus 116 ----d~~~~~~~~~v~~l~~~~~~~~i~lvGhS~GG~i~~~~~~~~~~~v~~lv~~~~p~~~~~~~~~~~~~~~~~~~~~ 191 (350)
T TIGR01836 116 ----DYINGYIDKCVDYICRTSKLDQISLLGICQGGTFSLCYAALYPDKIKNLVTMVTPVDFETPGNMLSNWARHVDIDL 191 (350)
T ss_pred ----HHHHHHHHHHHHHHHHHhCCCcccEEEECHHHHHHHHHHHhCchheeeEEEeccccccCCCCchhhhhccccCHHH
Confidence 11122344445666677788999999999999999999999999999999999886422110 00 00000
Q ss_pred HHHhhhcC-hhHHH--------------HHHHHhhccCCCchhHHhHHH---hhcC--cchhhhHHHHHhhcccccc--c
Q 023683 155 IRDFVLGS-SFGYQ--------------WLIRFCCMKKVGSFDVEDNRV---LLKG--RDRCRAVSEMGRKLNNSFD--M 212 (279)
Q Consensus 155 ~~~~~~~~-~~~~~--------------~~~~~~~~~~~~~~~~~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~--~ 212 (279)
........ ...+. ...... ....+++.+..+.. .... ........++.+.+..... .
T Consensus 192 ~~~~~~~~p~~~~~~~f~~l~p~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~w~~d~~~~~~~~~~~~~~~~~~~n~l~~ 270 (350)
T TIGR01836 192 AVDTMGNIPGELLNLTFLMLKPFSLGYQKYVNLV-DILEDERKVENFLRMEKWIFDSPDQAGEAFRQFVKDFYQQNGLIN 270 (350)
T ss_pred HHHhcCCCCHHHHHHHHHhcCcchhhhHHHHHHH-HhcCChHHHHHHHHHHHHhcCCcCccHHHHHHHHHHHHhcCcccC
Confidence 00000000 01111 111000 00011222222221 1111 1111122222221111000 0
Q ss_pred cc-----ccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCC--cEEEecCCCCCCCcch---HHHHHHHhhcC
Q 023683 213 AE-----WGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA--KFVGHSGGRWPQTSRG---RAHTRAYTEDV 279 (279)
Q Consensus 213 ~~-----~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~--~~~~i~~gH~~~~e~p---~~~~~~i~~fl 279 (279)
.. .......+++|+++++|++|...+.+..+.+.+.+++. +++++++||+..+.++ +++...|.+||
T Consensus 271 g~~~~~~~~~~l~~i~~Pvliv~G~~D~i~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~~~~~~~v~~~i~~wl 347 (350)
T TIGR01836 271 GEVEIGGRKVDLKNIKMPILNIYAERDHLVPPDASKALNDLVSSEDYTELSFPGGHIGIYVSGKAQKEVPPAIGKWL 347 (350)
T ss_pred CeeEECCEEccHHhCCCCeEEEecCCCCcCCHHHHHHHHHHcCCCCeEEEEcCCCCEEEEECchhHhhhhHHHHHHH
Confidence 00 01123457899999999987766777888888888754 3444589999877654 67788888775
No 53
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.76 E-value=2.4e-17 Score=125.82 Aligned_cols=198 Identities=8% Similarity=-0.017 Sum_probs=128.1
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
...|.++||.|++|.+||||.... +-.
T Consensus 35 gr~L~e~GyTv~aP~ypGHG~~~e-----------------~fl------------------------------------ 61 (243)
T COG1647 35 GRYLNENGYTVYAPRYPGHGTLPE-----------------DFL------------------------------------ 61 (243)
T ss_pred HHHHHHCCceEecCCCCCCCCCHH-----------------HHh------------------------------------
Confidence 457889999999999999998753 100
Q ss_pred ccccccChHHHHHHHHH---HHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHh
Q 023683 82 VKVIELGSDEVGRVLGQ---VIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDF 158 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~---~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 158 (279)
.++.+++-+++.+ .+...+.+.|.++|-||||.+++.+|..+| ++++|.++++....... ..+.
T Consensus 62 ----~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv~alkla~~~p--~K~iv~m~a~~~~k~~~--~iie----- 128 (243)
T COG1647 62 ----KTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGVFALKLAYHYP--PKKIVPMCAPVNVKSWR--IIIE----- 128 (243)
T ss_pred ----cCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhHHHHHHHhhCC--ccceeeecCCcccccch--hhhH-----
Confidence 1356666665554 445566889999999999999999999999 89999999986633211 0010
Q ss_pred hhcChhHHHHHHHHhhccCCCchhHHhHHHhhcC--cchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCc
Q 023683 159 VLGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKG--RDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSK 236 (279)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~ 236 (279)
.++.++-..-.....+.+..+.....+.. .........+++..... ...|..|++++.|.+|..
T Consensus 129 -----~~l~y~~~~kk~e~k~~e~~~~e~~~~~~~~~~~~~~~~~~i~~~~~~---------~~~I~~pt~vvq~~~D~m 194 (243)
T COG1647 129 -----GLLEYFRNAKKYEGKDQEQIDKEMKSYKDTPMTTTAQLKKLIKDARRS---------LDKIYSPTLVVQGRQDEM 194 (243)
T ss_pred -----HHHHHHHHhhhccCCCHHHHHHHHHHhhcchHHHHHHHHHHHHHHHhh---------hhhcccchhheecccCCC
Confidence 11111100001112344444444444432 12222222333332222 556889999999998777
Q ss_pred ccchhHHHHHhhCC--CCcEEEe-cCCCCCCCc-chHHHHHHHhhcC
Q 023683 237 EWSEEGSRVADALP--QAKFVGH-SGGRWPQTS-RGRAHTRAYTEDV 279 (279)
Q Consensus 237 ~~~~~~~~~~~~~~--~~~~~~i-~~gH~~~~e-~p~~~~~~i~~fl 279 (279)
.+.+.+..+.+..- ..++.++ ++||.+-.+ +.+.+.+.+..||
T Consensus 195 v~~~sA~~Iy~~v~s~~KeL~~~e~SgHVIt~D~Erd~v~e~V~~FL 241 (243)
T COG1647 195 VPAESANFIYDHVESDDKELKWLEGSGHVITLDKERDQVEEDVITFL 241 (243)
T ss_pred CCHHHHHHHHHhccCCcceeEEEccCCceeecchhHHHHHHHHHHHh
Confidence 77788888887763 3467788 799998765 5688999998886
No 54
>PRK10985 putative hydrolase; Provisional
Probab=99.76 E-value=9.1e-18 Score=142.26 Aligned_cols=206 Identities=9% Similarity=0.037 Sum_probs=113.0
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|.++||+|+++|+||||.|... ....+.
T Consensus 80 ~~~l~~~G~~v~~~d~rG~g~~~~~--------------~~~~~~----------------------------------- 110 (324)
T PRK10985 80 LEAAQKRGWLGVVMHFRGCSGEPNR--------------LHRIYH----------------------------------- 110 (324)
T ss_pred HHHHHHCCCEEEEEeCCCCCCCccC--------------CcceEC-----------------------------------
Confidence 4567889999999999999987541 111111
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCc--cceEEEeeCCCCCcchhhhhhhh---HHH
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS--VKSLTLLDTGIKPALPLFALNLP---LIR 156 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~~~~~~~~~~~~~~~~~---~~~ 156 (279)
.-..+|+...+..+.++++..+++++||||||.+++.+++++++. +.++|+++++.........+... ...
T Consensus 111 ----~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~GG~i~~~~~~~~~~~~~~~~~v~i~~p~~~~~~~~~~~~~~~~~~~ 186 (324)
T PRK10985 111 ----SGETEDARFFLRWLQREFGHVPTAAVGYSLGGNMLACLLAKEGDDLPLDAAVIVSAPLMLEACSYRMEQGFSRVYQ 186 (324)
T ss_pred ----CCchHHHHHHHHHHHHhCCCCCEEEEEecchHHHHHHHHHhhCCCCCccEEEEEcCCCCHHHHHHHHhhhHHHHHH
Confidence 002455555555555667778999999999999989888877654 89999998875422111111000 000
Q ss_pred Hhhh-cChhHHHHHHHHhhcc-CCCchhH------HhHHHhhcCc-chhhhHHHHHhhcccccccccccccccccCCCEE
Q 023683 157 DFVL-GSSFGYQWLIRFCCMK-KVGSFDV------EDNRVLLKGR-DRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQ 227 (279)
Q Consensus 157 ~~~~-~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvl 227 (279)
..+. ............+... ..+.+.+ .++.+.+..+ ........++.... .......+++|++
T Consensus 187 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~~~~~~~~g~~~~~~~y~~~~-------~~~~l~~i~~P~l 259 (324)
T PRK10985 187 RYLLNLLKANAARKLAAYPGTLPINLAQLKSVRRLREFDDLITARIHGFADAIDYYRQCS-------ALPLLNQIRKPTL 259 (324)
T ss_pred HHHHHHHHHHHHHHHHhccccccCCHHHHhcCCcHHHHhhhheeccCCCCCHHHHHHHCC-------hHHHHhCCCCCEE
Confidence 0000 0000000111111100 0111111 1111111111 12222333333211 1122456789999
Q ss_pred EEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcc
Q 023683 228 ILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSR 267 (279)
Q Consensus 228 ii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~ 267 (279)
+|+|++|.....+....+.+..++.+++++ +|||+.++|.
T Consensus 260 ii~g~~D~~~~~~~~~~~~~~~~~~~~~~~~~~GH~~~~~g 300 (324)
T PRK10985 260 IIHAKDDPFMTHEVIPKPESLPPNVEYQLTEHGGHVGFVGG 300 (324)
T ss_pred EEecCCCCCCChhhChHHHHhCCCeEEEECCCCCceeeCCC
Confidence 999997655555666667777888888888 7999999874
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.70 E-value=5.9e-16 Score=125.77 Aligned_cols=190 Identities=19% Similarity=0.203 Sum_probs=100.6
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchh-------hhhhhhHHHHhhhc
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPL-------FALNLPLIRDFVLG 161 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~-------~~~~~~~~~~~~~~ 161 (279)
...+++++..++++++..+++++||||||.+++.++.++|++++++|++++........ +.............
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~~~~~~~p~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (282)
T COG0596 71 LSAYADDLAALLDALGLEKVVLVGHSMGGAVALALALRHPDRVRGLVLIGPAPPPGLLEAALRQPAGAAPLAALADLLLG 150 (282)
T ss_pred HHHHHHHHHHHHHHhCCCceEEEEecccHHHHHHHHHhcchhhheeeEecCCCCcccccCccccCccccchhhhhhhhhc
Confidence 44459999999999999999999999999999999999999999999999875411100 00000000000000
Q ss_pred C-hhHHHHHHHHhh-ccCCCchhHHhHHHhhcC--cchhhhHHHHHhh--ccccc--ccc-cccccccccCCCEEEEeeC
Q 023683 162 S-SFGYQWLIRFCC-MKKVGSFDVEDNRVLLKG--RDRCRAVSEMGRK--LNNSF--DMA-EWGSSEGIKGIPMQILWSS 232 (279)
Q Consensus 162 ~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~--~~~~~--~~~-~~~~~~~~~~~Pvlii~G~ 232 (279)
. ............ .................. ............. ..... ... ........+++|+++++|+
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~i~g~ 230 (282)
T COG0596 151 LDAAAFAALLAALGLLAALAAAARAGLAEALRAPLLGAAAAAFARAARADLAAALLALLDRDLRAALARITVPTLIIHGE 230 (282)
T ss_pred cchhhhhhhhhcccccccccccchhccccccccccchhHhhhhhhhcccccchhhhcccccccchhhccCCCCeEEEecC
Confidence 0 000000000000 000000000000000000 0000000000000 00000 000 1111234478999999999
Q ss_pred CCCcccchhHHHHHhhCCC-CcEEEe-cCCCCCCCcchHHHHHHHhhc
Q 023683 233 VWSKEWSEEGSRVADALPQ-AKFVGH-SGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 233 ~d~~~~~~~~~~~~~~~~~-~~~~~i-~~gH~~~~e~p~~~~~~i~~f 278 (279)
+|...+......+.+..++ .+++++ ++||++++++|+.+++.+.+|
T Consensus 231 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~gH~~~~~~p~~~~~~i~~~ 278 (282)
T COG0596 231 DDPVVPAELARRLAAALPNDARLVVIPGAGHFPHLEAPEAFAAALLAF 278 (282)
T ss_pred CCCcCCHHHHHHHHhhCCCCceEEEeCCCCCcchhhcHHHHHHHHHHH
Confidence 7622232336677777785 788888 699999999999999888764
No 56
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=99.65 E-value=4.2e-14 Score=112.53 Aligned_cols=189 Identities=16% Similarity=0.121 Sum_probs=128.8
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC-CcchhhhhhhhHHHHhhh--cCh-
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK-PALPLFALNLPLIRDFVL--GSS- 163 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-~~~~~~~~~~~~~~~~~~--~~~- 163 (279)
|+++++++|..++++++++.++-+|---|+.|...+|.+||++|.+|||+++... ..+-.|....- ....+. +..
T Consensus 104 smd~LAd~l~~VL~~f~lk~vIg~GvGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~gwiew~~~K~-~s~~l~~~Gmt~ 182 (326)
T KOG2931|consen 104 SMDDLADMLPEVLDHFGLKSVIGMGVGAGAYILARFALNHPERVLGLVLINCDPCAKGWIEWAYNKV-SSNLLYYYGMTQ 182 (326)
T ss_pred CHHHHHHHHHHHHHhcCcceEEEecccccHHHHHHHHhcChhheeEEEEEecCCCCchHHHHHHHHH-HHHHHHhhchhh
Confidence 6999999999999999999999999999999999999999999999999999764 34555543221 111111 111
Q ss_pred hHHHHHHHHhhcc---CCCchhHHhHHHhhcCcchhhhHHHHHhhccccccccccccccc-ccCCCEEEEeeCCCCcccc
Q 023683 164 FGYQWLIRFCCMK---KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEG-IKGIPMQILWSSVWSKEWS 239 (279)
Q Consensus 164 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Pvlii~G~~d~~~~~ 239 (279)
...+.++....++ ....+.+++|++.+....+......++..+..+.+....+.... ..+||+|++.|++ .+-.
T Consensus 183 ~~~d~ll~H~Fg~e~~~~~~diVq~Yr~~l~~~~N~~Nl~~fl~ayn~R~DL~~~r~~~~~tlkc~vllvvGd~--Sp~~ 260 (326)
T KOG2931|consen 183 GVKDYLLAHHFGKEELGNNSDIVQEYRQHLGERLNPKNLALFLNAYNGRRDLSIERPKLGTTLKCPVLLVVGDN--SPHV 260 (326)
T ss_pred hHHHHHHHHHhccccccccHHHHHHHHHHHHhcCChhHHHHHHHHhcCCCCccccCCCcCccccccEEEEecCC--Cchh
Confidence 2222233322222 23556778888877665555555556555554433332222111 4679999999993 5555
Q ss_pred hhHHHHHhhC--CCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 240 EEGSRVADAL--PQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 240 ~~~~~~~~~~--~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+....+...+ .++.+..+ +||-.+..++|..+++.++=|+
T Consensus 261 ~~vv~~n~~Ldp~~ttllk~~d~g~l~~e~qP~kl~ea~~~Fl 303 (326)
T KOG2931|consen 261 SAVVECNSKLDPTYTTLLKMADCGGLVQEEQPGKLAEAFKYFL 303 (326)
T ss_pred hhhhhhhcccCcccceEEEEcccCCcccccCchHHHHHHHHHH
Confidence 5555665555 34567777 7999999999999999987664
No 57
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.63 E-value=1.2e-14 Score=117.17 Aligned_cols=186 Identities=14% Similarity=0.128 Sum_probs=112.1
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC-CcchhhhhhhhHHHHhhh--cCh-
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK-PALPLFALNLPLIRDFVL--GSS- 163 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~-~~~~~~~~~~~~~~~~~~--~~~- 163 (279)
|+++++++|..++++++++.++-+|--.||.|...+|.+||++|.++||+++... ..+..|....-. ...+. +..
T Consensus 81 smd~LAe~l~~Vl~~f~lk~vIg~GvGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~gw~Ew~~~K~~-~~~L~~~gmt~ 159 (283)
T PF03096_consen 81 SMDQLAEMLPEVLDHFGLKSVIGFGVGAGANILARFALKHPERVLGLILVNPTCTAAGWMEWFYQKLS-SWLLYSYGMTS 159 (283)
T ss_dssp -HHHHHCTHHHHHHHHT---EEEEEETHHHHHHHHHHHHSGGGEEEEEEES---S---HHHHHHHHHH--------CTTS
T ss_pred CHHHHHHHHHHHHHhCCccEEEEEeeccchhhhhhccccCccceeEEEEEecCCCCccHHHHHHHHHh-ccccccccccc
Confidence 6999999999999999999999999999999999999999999999999999864 345555332211 11111 111
Q ss_pred hHHHHHHHHhhcc---CCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccch
Q 023683 164 FGYQWLIRFCCMK---KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSE 240 (279)
Q Consensus 164 ~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~ 240 (279)
...+.++....+. ....+.++.++..+...........++..+..+ .+.........||+|+|.|+ ..+..+
T Consensus 160 ~~~d~Ll~h~Fg~~~~~~n~Dlv~~yr~~l~~~~Np~Nl~~f~~sy~~R---~DL~~~~~~~~c~vLlvvG~--~Sp~~~ 234 (283)
T PF03096_consen 160 SVKDYLLWHYFGKEEEENNSDLVQTYRQHLDERINPKNLALFLNSYNSR---TDLSIERPSLGCPVLLVVGD--NSPHVD 234 (283)
T ss_dssp -HHHHHHHHHS-HHHHHCT-HHHHHHHHHHHT-TTHHHHHHHHHHHHT--------SECTTCCS-EEEEEET--TSTTHH
T ss_pred chHHhhhhcccccccccccHHHHHHHHHHHhcCCCHHHHHHHHHHHhcc---ccchhhcCCCCCCeEEEEec--CCcchh
Confidence 2222222222111 124456677777665544445555555555443 22222233456999999999 466666
Q ss_pred hHHHHHhhCCC--CcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 241 EGSRVADALPQ--AKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 241 ~~~~~~~~~~~--~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.+..+..++.. .++..+ +||=.+..|+|+.+++.++=||
T Consensus 235 ~vv~~ns~Ldp~~ttllkv~dcGglV~eEqP~klaea~~lFl 276 (283)
T PF03096_consen 235 DVVEMNSKLDPTKTTLLKVADCGGLVLEEQPGKLAEAFKLFL 276 (283)
T ss_dssp HHHHHHHHS-CCCEEEEEETT-TT-HHHH-HHHHHHHHHHHH
T ss_pred hHHHHHhhcCcccceEEEecccCCcccccCcHHHHHHHHHHH
Confidence 67777777643 455666 7999999999999999988764
No 58
>PRK13604 luxD acyl transferase; Provisional
Probab=99.62 E-value=1.1e-14 Score=119.59 Aligned_cols=44 Identities=16% Similarity=-0.024 Sum_probs=35.8
Q ss_pred ccCCCEEEEeeCCCCcccchhHHHHHhhCC--CCcEEEe-cCCCCCC
Q 023683 221 IKGIPMQILWSSVWSKEWSEEGSRVADALP--QAKFVGH-SGGRWPQ 264 (279)
Q Consensus 221 ~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~--~~~~~~i-~~gH~~~ 264 (279)
.+++|+|+|+|+.|...+.+.++.+.+.++ +.+++++ +++|.+.
T Consensus 200 ~l~~PvLiIHG~~D~lVp~~~s~~l~e~~~s~~kkl~~i~Ga~H~l~ 246 (307)
T PRK13604 200 GLDIPFIAFTANNDSWVKQSEVIDLLDSIRSEQCKLYSLIGSSHDLG 246 (307)
T ss_pred hcCCCEEEEEcCCCCccCHHHHHHHHHHhccCCcEEEEeCCCccccC
Confidence 356999999999877777788888888775 6778888 6888775
No 59
>PLN02872 triacylglycerol lipase
Probab=99.62 E-value=1.1e-14 Score=125.34 Aligned_cols=57 Identities=11% Similarity=0.038 Sum_probs=47.0
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhCCC-CcEEEe-cCCCC---CCCcchHHHHHHHhhcC
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADALPQ-AKFVGH-SGGRW---PQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~~~-~~~~~i-~~gH~---~~~e~p~~~~~~i~~fl 279 (279)
++|+++++|++|.....+.++++.+.+++ .+++.+ ++||. ...+.|+++.+.|.+|+
T Consensus 325 ~~Pv~i~~G~~D~lv~~~dv~~l~~~Lp~~~~l~~l~~~gH~dfi~~~eape~V~~~Il~fL 386 (395)
T PLN02872 325 SLPLWMGYGGTDGLADVTDVEHTLAELPSKPELLYLENYGHIDFLLSTSAKEDVYNHMIQFF 386 (395)
T ss_pred CccEEEEEcCCCCCCCHHHHHHHHHHCCCccEEEEcCCCCCHHHHhCcchHHHHHHHHHHHH
Confidence 68999999998777667778888888887 566677 68995 55688999999999885
No 60
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.60 E-value=6e-14 Score=115.86 Aligned_cols=193 Identities=12% Similarity=0.016 Sum_probs=122.2
Q ss_pred cChHHHHHHHHHHHHhcCCccEE-EEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhh---------------
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVH-LVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFAL--------------- 150 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~--------------- 150 (279)
+|+.|+++.-..++++||++++. +||-||||+.+++++..||++|.++|.+++..+.......+
T Consensus 127 ~ti~D~V~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~~~~r~AI~~DP~~n 206 (368)
T COG2021 127 ITIRDMVRAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFNEVQRQAIEADPDWN 206 (368)
T ss_pred ccHHHHHHHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHHHHHHHHHHhCCCcc
Confidence 68999999999999999999988 99999999999999999999999999999975433221110
Q ss_pred --------------hhhHHHHhhh-cChhHHHHHHHH-hhccCCC----chhHHhHHHhhc----CcchhhhHHHH---H
Q 023683 151 --------------NLPLIRDFVL-GSSFGYQWLIRF-CCMKKVG----SFDVEDNRVLLK----GRDRCRAVSEM---G 203 (279)
Q Consensus 151 --------------~~~~~~~~~~-~~~~~~~~~~~~-~~~~~~~----~~~~~~~~~~~~----~~~~~~~~~~~---~ 203 (279)
........+. .....++..+.. ....... ...++.|.+... ..-.....+.. +
T Consensus 207 ~G~Y~~~~~P~~GL~~AR~l~~ltYrS~~~~~~rF~r~~~~~~~~~~~~~f~vESYL~~qg~kf~~rfDaNsYL~lt~al 286 (368)
T COG2021 207 GGDYYEGTQPERGLRLARMLAHLTYRSEEELDERFGRRLQADPLRGGGVRFAVESYLDYQGDKFVARFDANSYLYLTRAL 286 (368)
T ss_pred CCCccCCCCcchhHHHHHHHHHHHccCHHHHHHHhcccccccccCCCchhHHHHHHHHHHHHHHHhccCcchHHHHHHHH
Confidence 0000001111 011111111111 0000011 234444443211 11111112222 2
Q ss_pred hhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCCc-EEEe--cCCCCCCCcchHHHHHHHhhcC
Q 023683 204 RKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAK-FVGH--SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~-~~~i--~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.....+....+....+..+++|++++.-+.|...+.+..+.+.+.++.+. ++++ +.||..++...+.+...|.+||
T Consensus 287 d~~D~s~~~~~l~~al~~i~~~~lv~gi~sD~lfp~~~~~~~~~~L~~~~~~~~i~S~~GHDaFL~e~~~~~~~i~~fL 365 (368)
T COG2021 287 DYHDVSRGRGDLTAALARIKAPVLVVGITSDWLFPPELQRALAEALPAAGALREIDSPYGHDAFLVESEAVGPLIRKFL 365 (368)
T ss_pred HhcCCCCCcCcHHHHHhcCccCEEEEEecccccCCHHHHHHHHHhccccCceEEecCCCCchhhhcchhhhhHHHHHHh
Confidence 22222222333333455688999999999888888899999999998887 7777 4799999999999999998886
No 61
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.56 E-value=5.6e-14 Score=135.22 Aligned_cols=190 Identities=13% Similarity=0.014 Sum_probs=100.0
Q ss_pred ChHHHHHHHHHHHHh---cCCccEEEEEeCcchHHHHHHHHhC-CCccceEEEeeCCCCCc------ch-hh-hhhhhH-
Q 023683 88 GSDEVGRVLGQVIDT---FNLAPVHLVLHDSALPMSANWVAEN-PGSVKSLTLLDTGIKPA------LP-LF-ALNLPL- 154 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~-p~~v~~lvl~~~~~~~~------~~-~~-~~~~~~- 154 (279)
++.+++..+.+.++. ...+++++|||||||.+++.+++.+ |++|+++|+++++.... .+ .+ ......
T Consensus 120 ~l~~~i~~l~~~l~~v~~~~~~~v~lvG~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~d~~~~~~~~~~~~~~~~~~~~~ 199 (994)
T PRK07868 120 NLADHVVALSEAIDTVKDVTGRDVHLVGYSQGGMFCYQAAAYRRSKDIASIVTFGSPVDTLAALPMGIPAGLAAAAADFM 199 (994)
T ss_pred CHHHHHHHHHHHHHHHHHhhCCceEEEEEChhHHHHHHHHHhcCCCccceEEEEecccccCCCCcccchhhhhhcccccc
Confidence 566666666655544 3457899999999999999998755 56899999988874221 11 00 000000
Q ss_pred ---HHHh-------------hhcChhHHHHH---HHHhhc-c-CCCchhHHhHHHhh---cCcchhhhHHHHHhhccc--
Q 023683 155 ---IRDF-------------VLGSSFGYQWL---IRFCCM-K-KVGSFDVEDNRVLL---KGRDRCRAVSEMGRKLNN-- 208 (279)
Q Consensus 155 ---~~~~-------------~~~~~~~~~~~---~~~~~~-~-~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~-- 208 (279)
+... +.......... +..... . ..+++....+.... ..++ ....++.+.+..
T Consensus 200 ~~~~~~~~~~p~~~~~~~~~~l~p~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~~~w~~~~g--~~~~~~~~~~~~~n 277 (994)
T PRK07868 200 ADHVFNRLDIPGWMARTGFQMLDPVKTAKARVDFLRQLHDREALLPREQQRRFLESEGWIAWSG--PAISELLKQFIAHN 277 (994)
T ss_pred hhhhhhcCCCCHHHHHHHHHhcChhHHHHHHHHHHHhcCchhhhccchhhHhHHHHhhccccch--HHHHHHHHHHHHhC
Confidence 0000 00000001111 111111 1 12222223332221 1111 112222222211
Q ss_pred -cc----ccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcE-EEe-cCCCCCCCc---chHHHHHHHhhc
Q 023683 209 -SF----DMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKF-VGH-SGGRWPQTS---RGRAHTRAYTED 278 (279)
Q Consensus 209 -~~----~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~-~~i-~~gH~~~~e---~p~~~~~~i~~f 278 (279)
.. ....-......+++|+|+|+|++|...+.+..+.+.+.++++++ +++ ++||+.++- -|+++-..|.+|
T Consensus 278 ~~~~g~~~~~~~~~~L~~i~~P~L~i~G~~D~ivp~~~~~~l~~~i~~a~~~~~~~~~GH~g~~~g~~a~~~~wp~i~~w 357 (994)
T PRK07868 278 RMMTGGFAINGQMVTLADITCPVLAFVGEVDDIGQPASVRGIRRAAPNAEVYESLIRAGHFGLVVGSRAAQQTWPTVADW 357 (994)
T ss_pred cccCceEEECCEEcchhhCCCCEEEEEeCCCCCCCHHHHHHHHHhCCCCeEEEEeCCCCCEeeeechhhhhhhChHHHHH
Confidence 10 00010112556899999999998777777889999999999987 455 799997653 244555555555
Q ss_pred C
Q 023683 279 V 279 (279)
Q Consensus 279 l 279 (279)
|
T Consensus 358 l 358 (994)
T PRK07868 358 V 358 (994)
T ss_pred H
Confidence 3
No 62
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.56 E-value=1.5e-14 Score=117.90 Aligned_cols=85 Identities=15% Similarity=0.079 Sum_probs=68.5
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
++.|++.||+|+++|+||||.|... ..
T Consensus 49 a~~La~~Gy~Vl~~Dl~G~G~S~g~---------------~~-------------------------------------- 75 (266)
T TIGR03101 49 ARAFAAGGFGVLQIDLYGCGDSAGD---------------FA-------------------------------------- 75 (266)
T ss_pred HHHHHHCCCEEEEECCCCCCCCCCc---------------cc--------------------------------------
Confidence 4567788999999999999999762 11
Q ss_pred ccccccChHHHHHHHHH---HHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCC
Q 023683 82 VKVIELGSDEVGRVLGQ---VIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP 143 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~---~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 143 (279)
+++++.+++|+.. ++++.+.++++|+||||||.+++.+|.++|++++++|+++|....
T Consensus 76 ----~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~SmGG~vAl~~A~~~p~~v~~lVL~~P~~~g 136 (266)
T TIGR03101 76 ----AARWDVWKEDVAAAYRWLIEQGHPPVTLWGLRLGALLALDAANPLAAKCNRLVLWQPVVSG 136 (266)
T ss_pred ----cCCHHHHHHHHHHHHHHHHhcCCCCEEEEEECHHHHHHHHHHHhCccccceEEEeccccch
Confidence 1245666676655 445567789999999999999999999999999999999987653
No 63
>PRK11071 esterase YqiA; Provisional
Probab=99.55 E-value=1.2e-13 Score=107.73 Aligned_cols=141 Identities=7% Similarity=-0.110 Sum_probs=86.4
Q ss_pred HHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHHHHHH
Q 023683 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIR 171 (279)
Q Consensus 92 ~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (279)
+++++.+++++++.++++++||||||.+++.+|.++|. ++|+++|+..+.. .+...+. ..
T Consensus 47 ~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~~a~~~~~---~~vl~~~~~~~~~--------~~~~~~~-~~-------- 106 (190)
T PRK11071 47 AAELLESLVLEHGGDPLGLVGSSLGGYYATWLSQCFML---PAVVVNPAVRPFE--------LLTDYLG-EN-------- 106 (190)
T ss_pred HHHHHHHHHHHcCCCCeEEEEECHHHHHHHHHHHHcCC---CEEEECCCCCHHH--------HHHHhcC-Cc--------
Confidence 46777888899999999999999999999999999994 4688888654110 0000000 00
Q ss_pred HhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCC
Q 023683 172 FCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQ 251 (279)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~ 251 (279)
......+. +. .........+.... .. .. ..+|+++|+|++|...+.+.+.++.+.
T Consensus 107 ---~~~~~~~~-------~~---~~~~~~~d~~~~~~-------~~-i~-~~~~v~iihg~~De~V~~~~a~~~~~~--- 161 (190)
T PRK11071 107 ---ENPYTGQQ-------YV---LESRHIYDLKVMQI-------DP-LE-SPDLIWLLQQTGDEVLDYRQAVAYYAA--- 161 (190)
T ss_pred ---ccccCCCc-------EE---EcHHHHHHHHhcCC-------cc-CC-ChhhEEEEEeCCCCcCCHHHHHHHHHh---
Confidence 00000000 00 00011111111110 00 11 568899999998888888888887774
Q ss_pred CcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 252 AKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 252 ~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
++.+.+ +++|.. ++.++..+.+.+|+
T Consensus 162 ~~~~~~~ggdH~f--~~~~~~~~~i~~fl 188 (190)
T PRK11071 162 CRQTVEEGGNHAF--VGFERYFNQIVDFL 188 (190)
T ss_pred cceEEECCCCcch--hhHHHhHHHHHHHh
Confidence 566677 678887 45588888888874
No 64
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.55 E-value=1.9e-13 Score=106.89 Aligned_cols=171 Identities=8% Similarity=-0.055 Sum_probs=103.4
Q ss_pred ChHHHHHHHHHHHH-hcCCccEEEEEeCcchHHHHHHHHhC---CCccceEEEeeCCCCCcchhh-hhhhhHHHHhhhcC
Q 023683 88 GSDEVGRVLGQVID-TFNLAPVHLVLHDSALPMSANWVAEN---PGSVKSLTLLDTGIKPALPLF-ALNLPLIRDFVLGS 162 (279)
Q Consensus 88 ~~~~~~~~l~~~l~-~l~~~~~~lvGhS~Gg~ia~~~a~~~---p~~v~~lvl~~~~~~~~~~~~-~~~~~~~~~~~~~~ 162 (279)
+++++++.+..-+. -...+++.++||||||++|.++|.+. ...+.++.+.++..+...... .... ..
T Consensus 55 di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAfEvArrl~~~g~~p~~lfisg~~aP~~~~~~~i~~~--------~D 126 (244)
T COG3208 55 DIESLADELANELLPPLLDAPFALFGHSMGAMLAFEVARRLERAGLPPRALFISGCRAPHYDRGKQIHHL--------DD 126 (244)
T ss_pred cHHHHHHHHHHHhccccCCCCeeecccchhHHHHHHHHHHHHHcCCCcceEEEecCCCCCCcccCCccCC--------CH
Confidence 68999999998877 45557999999999999999999753 223667777776655221110 0000 01
Q ss_pred hhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhccccccccccccc-ccccCCCEEEEeeCCCCcccchh
Q 023683 163 SFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSS-EGIKGIPMQILWSSVWSKEWSEE 241 (279)
Q Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~Pvlii~G~~d~~~~~~~ 241 (279)
..+++.+..... .+++.++ +++.....+-.+|.-... ...++-. ...++||+.++.|++|.....+.
T Consensus 127 ~~~l~~l~~lgG---~p~e~le-------d~El~~l~LPilRAD~~~--~e~Y~~~~~~pl~~pi~~~~G~~D~~vs~~~ 194 (244)
T COG3208 127 ADFLADLVDLGG---TPPELLE-------DPELMALFLPILRADFRA--LESYRYPPPAPLACPIHAFGGEKDHEVSRDE 194 (244)
T ss_pred HHHHHHHHHhCC---CChHHhc-------CHHHHHHHHHHHHHHHHH--hcccccCCCCCcCcceEEeccCcchhccHHH
Confidence 133333333221 1221111 111111111111110000 0111110 23478999999999877777788
Q ss_pred HHHHHhhCC-CCcEEEecCCCCCCCcchHHHHHHHhhc
Q 023683 242 GSRVADALP-QAKFVGHSGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 242 ~~~~~~~~~-~~~~~~i~~gH~~~~e~p~~~~~~i~~f 278 (279)
+..+++... ..+++.++|||+...++.+++...|.+.
T Consensus 195 ~~~W~~~t~~~f~l~~fdGgHFfl~~~~~~v~~~i~~~ 232 (244)
T COG3208 195 LGAWREHTKGDFTLRVFDGGHFFLNQQREEVLARLEQH 232 (244)
T ss_pred HHHHHHhhcCCceEEEecCcceehhhhHHHHHHHHHHH
Confidence 888888876 6788888999999999999998888764
No 65
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=99.54 E-value=7.8e-15 Score=115.79 Aligned_cols=53 Identities=21% Similarity=0.290 Sum_probs=44.3
Q ss_pred cChHHHHHHHHHHHHhcC---CccEEEEEeCcchHHHHHHHHh--CCCccceEEEeeCC
Q 023683 87 LGSDEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAE--NPGSVKSLTLLDTG 140 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~ 140 (279)
.+.+.+++|+..+++.+- ..+++||||||||.|+.+.|.. -|. +.+|++++..
T Consensus 124 lS~eT~~KD~~~~i~~~fge~~~~iilVGHSmGGaIav~~a~~k~lps-l~Gl~viDVV 181 (343)
T KOG2564|consen 124 LSLETMSKDFGAVIKELFGELPPQIILVGHSMGGAIAVHTAASKTLPS-LAGLVVIDVV 181 (343)
T ss_pred cCHHHHHHHHHHHHHHHhccCCCceEEEeccccchhhhhhhhhhhchh-hhceEEEEEe
Confidence 578999999999988753 4689999999999999988753 466 8999999875
No 66
>PRK10566 esterase; Provisional
Probab=99.51 E-value=6.8e-13 Score=108.32 Aligned_cols=50 Identities=8% Similarity=-0.042 Sum_probs=34.1
Q ss_pred hHHHHHHHHHHHHh--cCCccEEEEEeCcchHHHHHHHHhCCCccceEEEee
Q 023683 89 SDEVGRVLGQVIDT--FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLD 138 (279)
Q Consensus 89 ~~~~~~~l~~~l~~--l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~ 138 (279)
.+++.+.+..+.+. .+.++++++||||||.+++.++.++|+....+++++
T Consensus 88 ~~~~~~~~~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~ 139 (249)
T PRK10566 88 MQEFPTLRAAIREEGWLLDDRLAVGGASMGGMTALGIMARHPWVKCVASLMG 139 (249)
T ss_pred HHHHHHHHHHHHhcCCcCccceeEEeecccHHHHHHHHHhCCCeeEEEEeeC
Confidence 44444444444433 234689999999999999999999887444444443
No 67
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=99.50 E-value=5.5e-13 Score=106.33 Aligned_cols=55 Identities=11% Similarity=0.069 Sum_probs=44.8
Q ss_pred ChHHHHHHHHHHHHhcC--CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVIDTFN--LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
+++|+.+.+..+++... .+++.++|||+||.+++.++.++|++++++|..++...
T Consensus 44 ~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~~~~~f~a~v~~~g~~d 100 (213)
T PF00326_consen 44 DVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQHPDRFKAAVAGAGVSD 100 (213)
T ss_dssp HHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHHTCCGSSEEEEESE-SS
T ss_pred chhhHHHHHHHHhccccccceeEEEEcccccccccchhhcccceeeeeeeccceecc
Confidence 46777777777766643 36899999999999999999999999999999988654
No 68
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.47 E-value=9.7e-12 Score=99.32 Aligned_cols=83 Identities=16% Similarity=0.322 Sum_probs=71.8
Q ss_pred ChhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhh
Q 023683 1 MINSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERK 80 (279)
Q Consensus 1 ~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
+.+.|.+.|.|+|.+++||+|.++.+ .+
T Consensus 54 i~~~l~~~~iR~I~iN~PGf~~t~~~---------------~~------------------------------------- 81 (297)
T PF06342_consen 54 IRPPLDEAGIRFIGINYPGFGFTPGY---------------PD------------------------------------- 81 (297)
T ss_pred hhhHHHHcCeEEEEeCCCCCCCCCCC---------------cc-------------------------------------
Confidence 35788999999999999999999983 22
Q ss_pred hccccccChHHHHHHHHHHHHhcCC-ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 81 SVKVIELGSDEVGRVLGQVIDTFNL-APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
..|+-.+-...+.++++.+++ ++++.+|||.|+-.|+.+|..+| +.++++++|..
T Consensus 82 ----~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcenal~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 82 ----QQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCENALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred ----cccChHHHHHHHHHHHHHcCCCCceEEEEeccchHHHHHHHhcCc--cceEEEecCCc
Confidence 136788889999999999998 57889999999999999999996 67999999985
No 69
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.45 E-value=7.7e-13 Score=98.65 Aligned_cols=125 Identities=22% Similarity=0.231 Sum_probs=90.0
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|+++||.|+.+|+||+|.+.. ..
T Consensus 19 ~~~l~~~G~~v~~~~~~~~~~~~~---------------~~--------------------------------------- 44 (145)
T PF12695_consen 19 AEALAEQGYAVVAFDYPGHGDSDG---------------AD--------------------------------------- 44 (145)
T ss_dssp HHHHHHTTEEEEEESCTTSTTSHH---------------SH---------------------------------------
T ss_pred HHHHHHCCCEEEEEecCCCCccch---------------hH---------------------------------------
Confidence 456888899999999999999955 11
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhc
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLG 161 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (279)
..+++.+++. .+..+.+++.++|||+||.+++.++.++ .+++++|++++... . ..
T Consensus 45 ------~~~~~~~~~~--~~~~~~~~i~l~G~S~Gg~~a~~~~~~~-~~v~~~v~~~~~~~--~-----------~~--- 99 (145)
T PF12695_consen 45 ------AVERVLADIR--AGYPDPDRIILIGHSMGGAIAANLAARN-PRVKAVVLLSPYPD--S-----------ED--- 99 (145)
T ss_dssp ------HHHHHHHHHH--HHHCTCCEEEEEEETHHHHHHHHHHHHS-TTESEEEEESESSG--C-----------HH---
T ss_pred ------HHHHHHHHHH--hhcCCCCcEEEEEEccCcHHHHHHhhhc-cceeEEEEecCccc--h-----------hh---
Confidence 1444444443 1223678999999999999999999988 78999999987200 0 00
Q ss_pred ChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchh
Q 023683 162 SSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEE 241 (279)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~ 241 (279)
....++|+++++|++|...+.+.
T Consensus 100 ---------------------------------------------------------~~~~~~pv~~i~g~~D~~~~~~~ 122 (145)
T PF12695_consen 100 ---------------------------------------------------------LAKIRIPVLFIHGENDPLVPPEQ 122 (145)
T ss_dssp ---------------------------------------------------------HTTTTSEEEEEEETT-SSSHHHH
T ss_pred ---------------------------------------------------------hhccCCcEEEEEECCCCcCCHHH
Confidence 00112399999999887777788
Q ss_pred HHHHHhhCC-CCcEEEe-cCCCC
Q 023683 242 GSRVADALP-QAKFVGH-SGGRW 262 (279)
Q Consensus 242 ~~~~~~~~~-~~~~~~i-~~gH~ 262 (279)
.+.+.+.++ ..+++++ +++|+
T Consensus 123 ~~~~~~~~~~~~~~~~i~g~~H~ 145 (145)
T PF12695_consen 123 VRRLYEALPGPKELYIIPGAGHF 145 (145)
T ss_dssp HHHHHHHHCSSEEEEEETTS-TT
T ss_pred HHHHHHHcCCCcEEEEeCCCcCc
Confidence 888877776 4677888 68985
No 70
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=99.40 E-value=3.9e-12 Score=100.22 Aligned_cols=121 Identities=6% Similarity=-0.071 Sum_probs=78.4
Q ss_pred HhcC-CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHHHHHHHhhccCCC
Q 023683 101 DTFN-LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMKKVG 179 (279)
Q Consensus 101 ~~l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (279)
+..| .++++|+|+|+|...++.+|++.| +.++||.+|...... .+. +
T Consensus 124 ~~~g~~~~Iil~G~SiGt~~tv~Lasr~~--~~alVL~SPf~S~~r------------v~~------------------~ 171 (258)
T KOG1552|consen 124 NRYGSPERIILYGQSIGTVPTVDLASRYP--LAAVVLHSPFTSGMR------------VAF------------------P 171 (258)
T ss_pred hhcCCCceEEEEEecCCchhhhhHhhcCC--cceEEEeccchhhhh------------hhc------------------c
Confidence 4453 688999999999999999999999 999999988654111 000 0
Q ss_pred chhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCC-cEEEe-
Q 023683 180 SFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA-KFVGH- 257 (279)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~-~~~~i- 257 (279)
.-....+...+.. ..-...+++|+|+++|+.|..........+.+..++. +-.++
T Consensus 172 ~~~~~~~~d~f~~-----------------------i~kI~~i~~PVLiiHgtdDevv~~sHg~~Lye~~k~~~epl~v~ 228 (258)
T KOG1552|consen 172 DTKTTYCFDAFPN-----------------------IEKISKITCPVLIIHGTDDEVVDFSHGKALYERCKEKVEPLWVK 228 (258)
T ss_pred CcceEEeeccccc-----------------------cCcceeccCCEEEEecccCceecccccHHHHHhccccCCCcEEe
Confidence 0000000000000 0014458899999999987777778888898888775 55555
Q ss_pred cCCCCCCCcchHHHHHHHhh
Q 023683 258 SGGRWPQTSRGRAHTRAYTE 277 (279)
Q Consensus 258 ~~gH~~~~e~p~~~~~~i~~ 277 (279)
++||.-..-.|+ ....+.+
T Consensus 229 g~gH~~~~~~~~-yi~~l~~ 247 (258)
T KOG1552|consen 229 GAGHNDIELYPE-YIEHLRR 247 (258)
T ss_pred cCCCcccccCHH-HHHHHHH
Confidence 789987655544 3334433
No 71
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.39 E-value=1.1e-11 Score=109.08 Aligned_cols=83 Identities=17% Similarity=0.119 Sum_probs=66.3
Q ss_pred ChhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhh
Q 023683 1 MINSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERK 80 (279)
Q Consensus 1 ~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
++..|.++||+|+++|+++-+.+.+
T Consensus 239 lVr~lv~qG~~VflIsW~nP~~~~r------------------------------------------------------- 263 (560)
T TIGR01839 239 FVQYCLKNQLQVFIISWRNPDKAHR------------------------------------------------------- 263 (560)
T ss_pred HHHHHHHcCCeEEEEeCCCCChhhc-------------------------------------------------------
Confidence 3677889999999999999776655
Q ss_pred hccccccChHHHHHHHHHHHHh----cCCccEEEEEeCcchHHHHH----HHHhCCC-ccceEEEeeCCCCC
Q 023683 81 SVKVIELGSDEVGRVLGQVIDT----FNLAPVHLVLHDSALPMSAN----WVAENPG-SVKSLTLLDTGIKP 143 (279)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~----l~~~~~~lvGhS~Gg~ia~~----~a~~~p~-~v~~lvl~~~~~~~ 143 (279)
+++++++++.+.+.++. -|.++++++||||||.++.. +++++++ +|++++++.+....
T Consensus 264 -----~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~GGtl~a~~~a~~aA~~~~~~V~sltllatplDf 330 (560)
T TIGR01839 264 -----EWGLSTYVDALKEAVDAVRAITGSRDLNLLGACAGGLTCAALVGHLQALGQLRKVNSLTYLVSLLDS 330 (560)
T ss_pred -----CCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECcchHHHHHHHHHHHhcCCCCceeeEEeeeccccc
Confidence 13567777666555544 46789999999999999996 7888986 89999999998643
No 72
>KOG4667 consensus Predicted esterase [Lipid transport and metabolism]
Probab=99.31 E-value=2.2e-11 Score=92.89 Aligned_cols=186 Identities=15% Similarity=0.082 Sum_probs=110.3
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|++.|+.++.+|.+|.|.|... . .|+
T Consensus 55 A~~~e~~gis~fRfDF~GnGeS~gs--------------f--~~G----------------------------------- 83 (269)
T KOG4667|consen 55 AKALEKEGISAFRFDFSGNGESEGS--------------F--YYG----------------------------------- 83 (269)
T ss_pred HHHHHhcCceEEEEEecCCCCcCCc--------------c--ccC-----------------------------------
Confidence 5678899999999999999999872 1 011
Q ss_pred ccccccChHHHHHHHHHHHHhcCCc-c--EEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHh
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLA-P--VHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDF 158 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~-~--~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 158 (279)
.....++|+..++.++... . -+++|||-||.+++.+|.++++ +.-+|.+++-..... .+.+.
T Consensus 84 ------n~~~eadDL~sV~q~~s~~nr~v~vi~gHSkGg~Vvl~ya~K~~d-~~~viNcsGRydl~~--------~I~eR 148 (269)
T KOG4667|consen 84 ------NYNTEADDLHSVIQYFSNSNRVVPVILGHSKGGDVVLLYASKYHD-IRNVINCSGRYDLKN--------GINER 148 (269)
T ss_pred ------cccchHHHHHHHHHHhccCceEEEEEEeecCccHHHHHHHHhhcC-chheEEcccccchhc--------chhhh
Confidence 1333468888888886532 2 3589999999999999999998 777777655432111 01111
Q ss_pred hhcChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCccc
Q 023683 159 VLGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEW 238 (279)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~ 238 (279)
+. +.++.+......-. ..+ .+. .+...-....... .+... ...... .-..+||||-++|..|...+
T Consensus 149 lg--~~~l~~ike~Gfid-~~~--rkG---~y~~rvt~eSlmd---rLntd-~h~acl--kId~~C~VLTvhGs~D~IVP 214 (269)
T KOG4667|consen 149 LG--EDYLERIKEQGFID-VGP--RKG---KYGYRVTEESLMD---RLNTD-IHEACL--KIDKQCRVLTVHGSEDEIVP 214 (269)
T ss_pred hc--ccHHHHHHhCCcee-cCc--ccC---CcCceecHHHHHH---HHhch-hhhhhc--CcCccCceEEEeccCCceee
Confidence 10 12233332222110 000 000 0000000000000 01100 000000 11257999999999888888
Q ss_pred chhHHHHHhhCCCCcEEEe-cCCCCCCCcc
Q 023683 239 SEEGSRVADALPQAKFVGH-SGGRWPQTSR 267 (279)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~ 267 (279)
++.++.+++.+|+-+++++ ++.|.....+
T Consensus 215 ve~AkefAk~i~nH~L~iIEgADHnyt~~q 244 (269)
T KOG4667|consen 215 VEDAKEFAKIIPNHKLEIIEGADHNYTGHQ 244 (269)
T ss_pred chhHHHHHHhccCCceEEecCCCcCccchh
Confidence 9999999999999999999 6889865444
No 73
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.29 E-value=1.3e-11 Score=106.71 Aligned_cols=53 Identities=17% Similarity=0.107 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHhc------CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 90 DEVGRVLGQVIDTF------NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 90 ~~~~~~l~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
..+++++.++++.+ ++++++||||||||.+|..++.++|++|.+|++++|+.+
T Consensus 97 ~~vg~~la~lI~~L~~~~gl~l~~VhLIGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP 155 (442)
T TIGR03230 97 KLVGKDVAKFVNWMQEEFNYPWDNVHLLGYSLGAHVAGIAGSLTKHKVNRITGLDPAGP 155 (442)
T ss_pred HHHHHHHHHHHHHHHHhhCCCCCcEEEEEECHHHHHHHHHHHhCCcceeEEEEEcCCCC
Confidence 45555555555543 468999999999999999999999999999999999853
No 74
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.19 E-value=7.1e-10 Score=89.28 Aligned_cols=56 Identities=14% Similarity=0.106 Sum_probs=45.1
Q ss_pred ChHHHHHHHHHHHHhcCC-ccEEEEEeCcchHHHHHHHHh---CCCccceEEEeeCCCCC
Q 023683 88 GSDEVGRVLGQVIDTFNL-APVHLVLHDSALPMSANWVAE---NPGSVKSLTLLDTGIKP 143 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~~ 143 (279)
+++++++...+.+....- ++++|+|||+||.+|+++|.+ ....|..|+++++.++.
T Consensus 47 si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E~A~~Le~~G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 47 SIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFEMARQLEEAGEEVSRLILIDSPPPS 106 (229)
T ss_dssp SHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHHHHHHHHHTT-SESEEEEESCSSTT
T ss_pred CHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHHHHHHHHHhhhccCceEEecCCCCC
Confidence 688889888877766544 499999999999999999964 35569999999987653
No 75
>PLN02442 S-formylglutathione hydrolase
Probab=99.18 E-value=7.4e-10 Score=92.07 Aligned_cols=55 Identities=15% Similarity=0.149 Sum_probs=46.8
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
-.+++.+.+....+.++.++++++||||||..++.++.++|+++++++.+++...
T Consensus 125 ~~~~l~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 179 (283)
T PLN02442 125 VVKELPKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIAN 179 (283)
T ss_pred HHHHHHHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCccC
Confidence 3566666677766667888999999999999999999999999999999988754
No 76
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=99.16 E-value=5.9e-10 Score=91.10 Aligned_cols=48 Identities=13% Similarity=-0.074 Sum_probs=33.0
Q ss_pred ccccCCCEEEEeeCCCCcccchhHHHHHh-hCCCCcEEEe-cCCCCCCCc
Q 023683 219 EGIKGIPMQILWSSVWSKEWSEEGSRVAD-ALPQAKFVGH-SGGRWPQTS 266 (279)
Q Consensus 219 ~~~~~~Pvlii~G~~d~~~~~~~~~~~~~-~~~~~~~~~i-~~gH~~~~e 266 (279)
+..|.+|+|||+..+|-....+....... ..|++.+..- -|||.-++.
T Consensus 270 L~~Ir~PtLii~A~DDP~~~~~~iP~~~~~~np~v~l~~t~~GGHvGfl~ 319 (345)
T COG0429 270 LPKIRKPTLIINAKDDPFMPPEVIPKLQEMLNPNVLLQLTEHGGHVGFLG 319 (345)
T ss_pred ccccccceEEEecCCCCCCChhhCCcchhcCCCceEEEeecCCceEEecc
Confidence 56689999999999543333334433333 5677777666 499998877
No 77
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=99.15 E-value=5.8e-10 Score=94.25 Aligned_cols=205 Identities=12% Similarity=0.027 Sum_probs=110.3
Q ss_pred hhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhc
Q 023683 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (279)
Q Consensus 3 ~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
....++||+|+.++.||+|.|... .+-.|+
T Consensus 148 ~~a~~~G~r~VVfN~RG~~g~~Lt--------------Tpr~f~------------------------------------ 177 (409)
T KOG1838|consen 148 HEAQRKGYRVVVFNHRGLGGSKLT--------------TPRLFT------------------------------------ 177 (409)
T ss_pred HHHHhCCcEEEEECCCCCCCCccC--------------CCceee------------------------------------
Confidence 345688999999999999999873 111222
Q ss_pred cccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCC---ccceEEEeeCCCCC---cchhhhhhhhHHH
Q 023683 83 KVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTGIKP---ALPLFALNLPLIR 156 (279)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~---~~~~~~~~~~~~~ 156 (279)
..+.+|+.+.+..+.+.....+...||.||||.+...|..+-.+ .+.++++++|.-.. ..-.+........
T Consensus 178 ---ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~Gg~iL~nYLGE~g~~~~l~~a~~v~~Pwd~~~~~~~~~~~~~~~~y~ 254 (409)
T KOG1838|consen 178 ---AGWTEDLREVVNHIKKRYPQAPLFAVGFSMGGNILTNYLGEEGDNTPLIAAVAVCNPWDLLAASRSIETPLYRRFYN 254 (409)
T ss_pred ---cCCHHHHHHHHHHHHHhCCCCceEEEEecchHHHHHHHhhhccCCCCceeEEEEeccchhhhhhhHHhcccchHHHH
Confidence 12567777777777788888899999999999999999876544 45666666665321 0000000000001
Q ss_pred Hhhh-cChhHHHHHHHHhhccCC------CchhHHhHHHhhcC-cchhhhHHHHHhhcccccccccccccccccCCCEEE
Q 023683 157 DFVL-GSSFGYQWLIRFCCMKKV------GSFDVEDNRVLLKG-RDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQI 228 (279)
Q Consensus 157 ~~~~-~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvli 228 (279)
..+. +....+.........+.. ....++++-+.+.. .-..+...++|+..... .....+.+|+++
T Consensus 255 ~~l~~~l~~~~~~~r~~~~~~~vd~d~~~~~~SvreFD~~~t~~~~gf~~~deYY~~aSs~-------~~v~~I~VP~L~ 327 (409)
T KOG1838|consen 255 RALTLNLKRIVLRHRHTLFEDPVDFDVILKSRSVREFDEALTRPMFGFKSVDEYYKKASSS-------NYVDKIKVPLLC 327 (409)
T ss_pred HHHHHhHHHHHhhhhhhhhhccchhhhhhhcCcHHHHHhhhhhhhcCCCcHHHHHhhcchh-------hhcccccccEEE
Confidence 1111 000000000000000000 00111111111111 11222233343332221 124568899999
Q ss_pred EeeCCCCcccc-hhHHHHHhhCCCCcEEEe-cCCCCCCCcc
Q 023683 229 LWSSVWSKEWS-EEGSRVADALPQAKFVGH-SGGRWPQTSR 267 (279)
Q Consensus 229 i~G~~d~~~~~-~~~~~~~~~~~~~~~~~i-~~gH~~~~e~ 267 (279)
|++.+|...+. ..-.......|+.-+++- .|||..++|.
T Consensus 328 ina~DDPv~p~~~ip~~~~~~np~v~l~~T~~GGHlgfleg 368 (409)
T KOG1838|consen 328 INAADDPVVPEEAIPIDDIKSNPNVLLVITSHGGHLGFLEG 368 (409)
T ss_pred EecCCCCCCCcccCCHHHHhcCCcEEEEEeCCCceeeeecc
Confidence 99996544444 344555566676666655 5999998887
No 78
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.15 E-value=1e-10 Score=96.59 Aligned_cols=39 Identities=23% Similarity=0.175 Sum_probs=36.1
Q ss_pred CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 104 NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
+.++++||||||||.++..++.++|++|.++++++|+.+
T Consensus 110 ~~~~i~lIGhSlGa~vAg~~a~~~~~~v~~iv~LDPa~p 148 (275)
T cd00707 110 SLENVHLIGHSLGAHVAGFAGKRLNGKLGRITGLDPAGP 148 (275)
T ss_pred ChHHEEEEEecHHHHHHHHHHHHhcCccceeEEecCCcc
Confidence 457899999999999999999999999999999999854
No 79
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.12 E-value=3.4e-10 Score=93.18 Aligned_cols=56 Identities=14% Similarity=0.138 Sum_probs=50.7
Q ss_pred cChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
++..+.|..++.++-.+|.+++.+-|-.||+.|+..+|..+|+.|.++-+-.+...
T Consensus 210 Fn~~a~ArvmrkLMlRLg~nkffiqGgDwGSiI~snlasLyPenV~GlHlnm~~~~ 265 (469)
T KOG2565|consen 210 FNAAATARVMRKLMLRLGYNKFFIQGGDWGSIIGSNLASLYPENVLGLHLNMCFVN 265 (469)
T ss_pred ccHHHHHHHHHHHHHHhCcceeEeecCchHHHHHHHHHhhcchhhhHhhhcccccC
Confidence 56888999999999999999999999999999999999999999998877666643
No 80
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.12 E-value=2.1e-10 Score=103.98 Aligned_cols=37 Identities=5% Similarity=-0.058 Sum_probs=33.7
Q ss_pred ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
.++.++||||||.+++.+|..+|+.++++|..++...
T Consensus 97 ~~v~~~G~S~GG~~a~~~a~~~~~~l~aiv~~~~~~d 133 (550)
T TIGR00976 97 GNVGMLGVSYLAVTQLLAAVLQPPALRAIAPQEGVWD 133 (550)
T ss_pred CcEEEEEeChHHHHHHHHhccCCCceeEEeecCcccc
Confidence 6899999999999999999999999999999887643
No 81
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=99.10 E-value=5.4e-09 Score=89.70 Aligned_cols=56 Identities=18% Similarity=0.145 Sum_probs=48.2
Q ss_pred cChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhC-----CCccceEEEeeCCCCC
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAEN-----PGSVKSLTLLDTGIKP 143 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~~~ 143 (279)
++++++++.+.+++++.|.+ ++++|+|+||..++.+++.+ |.++++++++++++..
T Consensus 150 f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~laa~Al~a~~~~p~~~~sltlm~~PID~ 210 (406)
T TIGR01849 150 FDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLAAVALMAENEPPAQPRSMTLMGGPIDA 210 (406)
T ss_pred CCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHHHHHHHHhcCCCCCcceEEEEecCccC
Confidence 57999999999999999866 99999999999987776654 7789999999998643
No 82
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.09 E-value=3.5e-09 Score=84.30 Aligned_cols=52 Identities=10% Similarity=-0.017 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 91 EVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 91 ~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
++.+.+..+.+..++ ++++|+|||+||.+++.++.++|+.+.+++.+++...
T Consensus 78 ~~~~~i~~~~~~~~id~~~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 78 SLHQLIDAVKANYSIDPNRVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred HHHHHHHHHHHhcCcChhheEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 333444444444444 5899999999999999999999999999998887653
No 83
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.09 E-value=5.3e-09 Score=86.65 Aligned_cols=53 Identities=11% Similarity=0.068 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHh---cCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 90 DEVGRVLGQVIDT---FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 90 ~~~~~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
..+++++..++++ ++.+++.++||||||.+++.++.++|+.+++++++++...
T Consensus 119 ~~~~~~l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~~ 174 (275)
T TIGR02821 119 SYIVQELPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIVA 174 (275)
T ss_pred HHHHHHHHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCccC
Confidence 3346777777776 3456899999999999999999999999999999988754
No 84
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.07 E-value=5.9e-09 Score=88.82 Aligned_cols=168 Identities=13% Similarity=0.028 Sum_probs=89.8
Q ss_pred hhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhc
Q 023683 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (279)
Q Consensus 3 ~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
+.|..+|+.++++|+||.|.|... +-.
T Consensus 212 ~~l~~rGiA~LtvDmPG~G~s~~~--------------~l~--------------------------------------- 238 (411)
T PF06500_consen 212 DYLAPRGIAMLTVDMPGQGESPKW--------------PLT--------------------------------------- 238 (411)
T ss_dssp CCCHHCT-EEEEE--TTSGGGTTT---------------S----------------------------------------
T ss_pred HHHHhCCCEEEEEccCCCcccccC--------------CCC---------------------------------------
Confidence 457789999999999999999652 111
Q ss_pred cccccChHHHHHHHHHHHHhcC---CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchh--hhhhhhHHHH
Q 023683 83 KVIELGSDEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPL--FALNLPLIRD 157 (279)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~--~~~~~~~~~~ 157 (279)
.+.+.+-+.+.+.+.... ..+|.++|.|+||.+|..+|..++++++++|.++++.-..+.. +....|
T Consensus 239 ----~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~RlkavV~~Ga~vh~~ft~~~~~~~~P---- 310 (411)
T PF06500_consen 239 ----QDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPRLKAVVALGAPVHHFFTDPEWQQRVP---- 310 (411)
T ss_dssp ----S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT-SEEEEES---SCGGH-HHHHTTS-----
T ss_pred ----cCHHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccceeeEeeeCchHhhhhccHHHHhcCC----
Confidence 012234444444444443 4689999999999999999999999999999999986533321 111111
Q ss_pred hhhcChhHHHHHHHHhhcc-CCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccc--cccCCCEEEEeeCCC
Q 023683 158 FVLGSSFGYQWLIRFCCMK-KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSE--GIKGIPMQILWSSVW 234 (279)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~Pvlii~G~~d 234 (279)
......+....+. ..+.+.+ .. ....+.. .. ..++ +...+|+|.+.|++|
T Consensus 311 ------~my~d~LA~rlG~~~~~~~~l---~~-------------el~~~SL----k~-qGlL~~rr~~~plL~i~~~~D 363 (411)
T PF06500_consen 311 ------DMYLDVLASRLGMAAVSDESL---RG-------------ELNKFSL----KT-QGLLSGRRCPTPLLAINGEDD 363 (411)
T ss_dssp ------HHHHHHHHHHCT-SCE-HHHH---HH-------------HGGGGST----TT-TTTTTSS-BSS-EEEEEETT-
T ss_pred ------HHHHHHHHHHhCCccCCHHHH---HH-------------HHHhcCc----ch-hccccCCCCCcceEEeecCCC
Confidence 1111111111111 0111111 11 1010100 00 0012 446799999999988
Q ss_pred CcccchhHHHHHhhCCCCcEEEec
Q 023683 235 SKEWSEEGSRVADALPQAKFVGHS 258 (279)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~i~ 258 (279)
...+.+..+-++....+.+...++
T Consensus 364 ~v~P~eD~~lia~~s~~gk~~~~~ 387 (411)
T PF06500_consen 364 PVSPIEDSRLIAESSTDGKALRIP 387 (411)
T ss_dssp SSS-HHHHHHHHHTBTT-EEEEE-
T ss_pred CCCCHHHHHHHHhcCCCCceeecC
Confidence 777778888888877778877774
No 85
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=99.05 E-value=4.3e-09 Score=96.62 Aligned_cols=151 Identities=11% Similarity=-0.013 Sum_probs=85.4
Q ss_pred ChHHHHHHHHHHHHhcCC---ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChh
Q 023683 88 GSDEVGRVLGQVIDTFNL---APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSF 164 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (279)
+.+|+.+.+. ++.+.+. +++.+.|||+||.+++..+.+.| .+++.+...+...-.. .....
T Consensus 453 ~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~~~~~~-----------~~~~~--- 516 (620)
T COG1506 453 DLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGYMTLLAATKTP-RFKAAVAVAGGVDWLL-----------YFGES--- 516 (620)
T ss_pred cHHHHHHHHH-HHHhCCCcChHHeEEeccChHHHHHHHHHhcCc-hhheEEeccCcchhhh-----------hcccc---
Confidence 5777888777 6666553 48999999999999999999888 6777776655443110 00000
Q ss_pred HHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHH
Q 023683 165 GYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSR 244 (279)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~ 244 (279)
+......+......+.. ....+...... .....+++|+|+|||++|.-.+.+.+.+
T Consensus 517 --------------~~~~~~~~~~~~~~~~~---~~~~~~~~sp~-------~~~~~i~~P~LliHG~~D~~v~~~q~~~ 572 (620)
T COG1506 517 --------------TEGLRFDPEENGGGPPE---DREKYEDRSPI-------FYADNIKTPLLLIHGEEDDRVPIEQAEQ 572 (620)
T ss_pred --------------chhhcCCHHHhCCCccc---ChHHHHhcChh-------hhhcccCCCEEEEeecCCccCChHHHHH
Confidence 00000000000000000 00011000000 0144578999999999887777766555
Q ss_pred HHhhC----CCCcEEEe-cCCCCCCC-cchHHHHHHHhhc
Q 023683 245 VADAL----PQAKFVGH-SGGRWPQT-SRGRAHTRAYTED 278 (279)
Q Consensus 245 ~~~~~----~~~~~~~i-~~gH~~~~-e~p~~~~~~i~~f 278 (279)
+.+.+ ...+++++ +.||.+.- ++-..+.+.+.+|
T Consensus 573 ~~~aL~~~g~~~~~~~~p~e~H~~~~~~~~~~~~~~~~~~ 612 (620)
T COG1506 573 LVDALKRKGKPVELVVFPDEGHGFSRPENRVKVLKEILDW 612 (620)
T ss_pred HHHHHHHcCceEEEEEeCCCCcCCCCchhHHHHHHHHHHH
Confidence 55443 45677888 68999875 3344455555555
No 86
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=99.03 E-value=6.9e-09 Score=87.41 Aligned_cols=55 Identities=20% Similarity=0.147 Sum_probs=47.0
Q ss_pred cChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCc-cceEEEeeCCC
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS-VKSLTLLDTGI 141 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~-v~~lvl~~~~~ 141 (279)
|-.+.+.+.+..+.+..+.++++++|||.||.++..+++.++.+ |++++++.+..
T Consensus 162 Yi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S~T~lts~~ 217 (445)
T COG3243 162 YILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKSLTLLTSPV 217 (445)
T ss_pred HHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhcccccceeeecch
Confidence 33456667777777888889999999999999999999999887 99999998874
No 87
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=99.02 E-value=6.8e-09 Score=96.83 Aligned_cols=37 Identities=3% Similarity=-0.123 Sum_probs=33.1
Q ss_pred CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 105 LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
-++|.++|.|+||.+++.+|...|+.++++|..++..
T Consensus 337 nGkVGm~G~SY~G~~~~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 337 NGKVAMTGKSYLGTLPNAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred CCeeEEEEEcHHHHHHHHHHhhCCCcceEEEeeCCCC
Confidence 4699999999999999999999999999999877654
No 88
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=99.01 E-value=6.4e-10 Score=85.16 Aligned_cols=118 Identities=12% Similarity=0.052 Sum_probs=74.1
Q ss_pred cCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHHHHHHHhhccCCCchh
Q 023683 103 FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMKKVGSFD 182 (279)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (279)
++-.+++|.|-|.||++|+.+|++..+++.++|+-++...-.. ...+. ...+....+..++.+
T Consensus 146 ~dktkivlfGrSlGGAvai~lask~~~ri~~~ivENTF~SIp~----~~i~~-------v~p~~~k~i~~lc~k------ 208 (300)
T KOG4391|consen 146 LDKTKIVLFGRSLGGAVAIHLASKNSDRISAIIVENTFLSIPH----MAIPL-------VFPFPMKYIPLLCYK------ 208 (300)
T ss_pred CCcceEEEEecccCCeeEEEeeccchhheeeeeeechhccchh----hhhhe-------eccchhhHHHHHHHH------
Confidence 3446899999999999999999999999999999887643100 00000 000000100001000
Q ss_pred HHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCC--cEEEe-cC
Q 023683 183 VEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA--KFVGH-SG 259 (279)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~--~~~~i-~~ 259 (279)
. .+..++. .+..++|.|+|.|.+|...++..++.+...+|.. ++..+ +|
T Consensus 209 -----------n----~~~S~~k-------------i~~~~~P~LFiSGlkDelVPP~~Mr~Ly~~c~S~~Krl~eFP~g 260 (300)
T KOG4391|consen 209 -----------N----KWLSYRK-------------IGQCRMPFLFISGLKDELVPPVMMRQLYELCPSRTKRLAEFPDG 260 (300)
T ss_pred -----------h----hhcchhh-------------hccccCceEEeecCccccCCcHHHHHHHHhCchhhhhheeCCCC
Confidence 0 0000000 2234699999999999888889999999998765 46667 58
Q ss_pred CCCCCC
Q 023683 260 GRWPQT 265 (279)
Q Consensus 260 gH~~~~ 265 (279)
.|+=-+
T Consensus 261 tHNDT~ 266 (300)
T KOG4391|consen 261 THNDTW 266 (300)
T ss_pred ccCceE
Confidence 897543
No 89
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=99.01 E-value=6.9e-09 Score=78.21 Aligned_cols=55 Identities=2% Similarity=-0.128 Sum_probs=35.9
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
.+|+++|+|+.|........-++.+..+ .+++++ +++||.+-. -+.+.+.|.+||
T Consensus 149 P~~~lvi~g~~Ddvv~l~~~l~~~~~~~-~~~i~i~~a~HFF~gK-l~~l~~~i~~~l 204 (210)
T COG2945 149 PSPGLVIQGDADDVVDLVAVLKWQESIK-ITVITIPGADHFFHGK-LIELRDTIADFL 204 (210)
T ss_pred CCCceeEecChhhhhcHHHHHHhhcCCC-CceEEecCCCceeccc-HHHHHHHHHHHh
Confidence 5899999999764333344444444433 455666 799998755 456777776664
No 90
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.00 E-value=6.8e-10 Score=96.66 Aligned_cols=87 Identities=16% Similarity=0.164 Sum_probs=68.0
Q ss_pred ChhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhh
Q 023683 1 MINSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERK 80 (279)
Q Consensus 1 ~~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
+++.|.+.||.+ ..|++|+|.+.+. ....
T Consensus 113 li~~L~~~GY~~-~~dL~g~gYDwR~---------------~~~~----------------------------------- 141 (440)
T PLN02733 113 MIEQLIKWGYKE-GKTLFGFGYDFRQ---------------SNRL----------------------------------- 141 (440)
T ss_pred HHHHHHHcCCcc-CCCcccCCCCccc---------------cccH-----------------------------------
Confidence 357789998755 8999999999872 1100
Q ss_pred hccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCc----cceEEEeeCCCCC
Q 023683 81 SVKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS----VKSLTLLDTGIKP 143 (279)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~----v~~lvl~~~~~~~ 143 (279)
+..++++.+.+.++.+..+.++++||||||||.+++.++..+|+. |+++|.++++...
T Consensus 142 -----~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~p~~~~k~I~~~I~la~P~~G 203 (440)
T PLN02733 142 -----PETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLHSDVFEKYVNSWIAIAAPFQG 203 (440)
T ss_pred -----HHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHCCHhHHhHhccEEEECCCCCC
Confidence 013567777777777788889999999999999999999988864 7999999887543
No 91
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.96 E-value=3.2e-09 Score=82.22 Aligned_cols=214 Identities=11% Similarity=0.022 Sum_probs=116.6
Q ss_pred hhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhc
Q 023683 3 NSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSV 82 (279)
Q Consensus 3 ~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (279)
..+.+.||.|..+|+||.|.|+.+ ... |+-|.|
T Consensus 51 ~~a~~~Gf~Vlt~dyRG~g~S~p~---------------~~~-------~~~~~~------------------------- 83 (281)
T COG4757 51 AAAAKAGFEVLTFDYRGIGQSRPA---------------SLS-------GSQWRY------------------------- 83 (281)
T ss_pred HHhhccCceEEEEecccccCCCcc---------------ccc-------cCccch-------------------------
Confidence 456788999999999999999872 110 000000
Q ss_pred cccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhh--
Q 023683 83 KVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVL-- 160 (279)
Q Consensus 83 ~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~-- 160 (279)
.|+-..|+...|..+-+.+.-.+...|||||||.+.-.+. ++| +..+....+...- +..|.-....+.....
T Consensus 84 --~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGqa~gL~~-~~~-k~~a~~vfG~gag--wsg~m~~~~~l~~~~l~~ 157 (281)
T COG4757 84 --LDWARLDFPAALAALKKALPGHPLYFVGHSFGGQALGLLG-QHP-KYAAFAVFGSGAG--WSGWMGLRERLGAVLLWN 157 (281)
T ss_pred --hhhhhcchHHHHHHHHhhCCCCceEEeeccccceeecccc-cCc-ccceeeEeccccc--cccchhhhhcccceeecc
Confidence 1233445555555555556667999999999999765544 566 5555555544421 1001000000000000
Q ss_pred --c-ChhHHHHHHHHh---hccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCC
Q 023683 161 --G-SSFGYQWLIRFC---CMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVW 234 (279)
Q Consensus 161 --~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d 234 (279)
. .-.++...+... .+..++-..++++......+... .....+...++....+.+|++.+...+|
T Consensus 158 lv~p~lt~w~g~~p~~l~G~G~d~p~~v~RdW~RwcR~p~y~----------fddp~~~~~~q~yaaVrtPi~~~~~~DD 227 (281)
T COG4757 158 LVGPPLTFWKGYMPKDLLGLGSDLPGTVMRDWARWCRHPRYY----------FDDPAMRNYRQVYAAVRTPITFSRALDD 227 (281)
T ss_pred ccccchhhccccCcHhhcCCCccCcchHHHHHHHHhcCcccc----------ccChhHhHHHHHHHHhcCceeeeccCCC
Confidence 0 001111111111 11124444445554433332110 0001111222334457899999999987
Q ss_pred CcccchhHHHHHhhCCCCcEEEe---c----CCCCCCCcch-HHHHHHHhhcC
Q 023683 235 SKEWSEEGSRVADALPQAKFVGH---S----GGRWPQTSRG-RAHTRAYTEDV 279 (279)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~i---~----~gH~~~~e~p-~~~~~~i~~fl 279 (279)
...+....+.+.+..+|+.+... + -||+-...+| |.+-+.+.+|+
T Consensus 228 ~w~P~As~d~f~~~y~nApl~~~~~~~~~~~lGH~gyfR~~~Ealwk~~L~w~ 280 (281)
T COG4757 228 PWAPPASRDAFASFYRNAPLEMRDLPRAEGPLGHMGYFREPFEALWKEMLGWF 280 (281)
T ss_pred CcCCHHHHHHHHHhhhcCcccceecCcccCcccchhhhccchHHHHHHHHHhh
Confidence 77777888999999988876443 2 3999999888 66777666653
No 92
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=98.95 E-value=1e-08 Score=102.40 Aligned_cols=55 Identities=24% Similarity=0.105 Sum_probs=47.5
Q ss_pred cChHHHHHHHHHHHHhcCC-ccEEEEEeCcchHHHHHHHHh---CCCccceEEEeeCCC
Q 023683 87 LGSDEVGRVLGQVIDTFNL-APVHLVLHDSALPMSANWVAE---NPGSVKSLTLLDTGI 141 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~ 141 (279)
++++++++++.+.++.+.. .+++++||||||.++.++|.+ .++++..++++++..
T Consensus 1113 ~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1113 TSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGIAARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred CCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHHHHHHHHcCCceeEEEEecCCC
Confidence 4799999999998887653 589999999999999999985 588899999998754
No 93
>PLN00021 chlorophyllase
Probab=98.90 E-value=5e-09 Score=87.92 Aligned_cols=39 Identities=15% Similarity=0.040 Sum_probs=32.9
Q ss_pred cCCccEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeeCCC
Q 023683 103 FNLAPVHLVLHDSALPMSANWVAENPG-----SVKSLTLLDTGI 141 (279)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~ 141 (279)
.+.++++++||||||.+++.+|..+++ +++++|+++|..
T Consensus 123 ~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 123 PDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred cChhheEEEEECcchHHHHHHHhhccccccccceeeEEeecccc
Confidence 345789999999999999999998874 578999888753
No 94
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.89 E-value=1.1e-08 Score=77.89 Aligned_cols=84 Identities=15% Similarity=0.173 Sum_probs=63.7
Q ss_pred hhhhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKS 81 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (279)
+..|+++|+.|+.+|-+=+=.+.+. |..
T Consensus 22 a~~l~~~G~~VvGvdsl~Yfw~~rt--------------P~~-------------------------------------- 49 (192)
T PF06057_consen 22 AEALAKQGVPVVGVDSLRYFWSERT--------------PEQ-------------------------------------- 49 (192)
T ss_pred HHHHHHCCCeEEEechHHHHhhhCC--------------HHH--------------------------------------
Confidence 5678999999999998776666663 211
Q ss_pred ccccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCC----ccceEEEeeCCCCC
Q 023683 82 VKVIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG----SVKSLTLLDTGIKP 143 (279)
Q Consensus 82 ~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~~ 143 (279)
+..++.+.+....++++.++++|||.|+|+-+.-....+.|. +|+.++|+++....
T Consensus 50 ------~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP~~~nrLp~~~r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 50 ------TAADLARIIRHYRARWGRKRVVLIGYSFGADVLPFIYNRLPAALRARVAQVVLLSPSTTA 109 (192)
T ss_pred ------HHHHHHHHHHHHHHHhCCceEEEEeecCCchhHHHHHhhCCHHHHhheeEEEEeccCCcc
Confidence 345555566666677888999999999999888777777664 78999999887553
No 95
>PRK11460 putative hydrolase; Provisional
Probab=98.85 E-value=4.4e-08 Score=79.04 Aligned_cols=115 Identities=7% Similarity=-0.045 Sum_probs=75.9
Q ss_pred HHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHHHH
Q 023683 92 VGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWL 169 (279)
Q Consensus 92 ~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (279)
+.+.+..+.+..++ ++++++|||+||.+++.++.++|+.+.+++.+++...
T Consensus 87 l~~~i~~~~~~~~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~~--------------------------- 139 (232)
T PRK11460 87 FIETVRYWQQQSGVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRYA--------------------------- 139 (232)
T ss_pred HHHHHHHHHHhcCCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEeccccc---------------------------
Confidence 33444444455554 5799999999999999999999988787776644111
Q ss_pred HHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhC
Q 023683 170 IRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADAL 249 (279)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~ 249 (279)
. ... ......|+++++|++|...+.+..+++.+.+
T Consensus 140 ------~-~~~--------------------------------------~~~~~~pvli~hG~~D~vvp~~~~~~~~~~L 174 (232)
T PRK11460 140 ------S-LPE--------------------------------------TAPTATTIHLIHGGEDPVIDVAHAVAAQEAL 174 (232)
T ss_pred ------c-ccc--------------------------------------cccCCCcEEEEecCCCCccCHHHHHHHHHHH
Confidence 0 000 0002489999999987766666655555544
Q ss_pred ----CCCcEEEe-cCCCCCCCcchHHHHHHHhhc
Q 023683 250 ----PQAKFVGH-SGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 250 ----~~~~~~~i-~~gH~~~~e~p~~~~~~i~~f 278 (279)
.+++++++ ++||.+..+.-+.+.+.+.++
T Consensus 175 ~~~g~~~~~~~~~~~gH~i~~~~~~~~~~~l~~~ 208 (232)
T PRK11460 175 ISLGGDVTLDIVEDLGHAIDPRLMQFALDRLRYT 208 (232)
T ss_pred HHCCCCeEEEEECCCCCCCCHHHHHHHHHHHHHH
Confidence 34566777 689999766666666655544
No 96
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.84 E-value=2.2e-08 Score=82.00 Aligned_cols=58 Identities=9% Similarity=0.077 Sum_probs=38.8
Q ss_pred ChHHHHHHHHHHHHhc----CCccEEEEEeCcchHHHHHHHHhCC-----CccceEEEeeCCCCCcc
Q 023683 88 GSDEVGRVLGQVIDTF----NLAPVHLVLHDSALPMSANWVAENP-----GSVKSLTLLDTGIKPAL 145 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l----~~~~~~lvGhS~Gg~ia~~~a~~~p-----~~v~~lvl~~~~~~~~~ 145 (279)
|.+++.+.|..++... +.++|+|+|||-|+.-+++|..... ..|++.||-+|......
T Consensus 86 D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 86 DVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp HHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred HHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 3555555555555552 4579999999999999999987542 57999999999865443
No 97
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=98.82 E-value=3.6e-07 Score=75.11 Aligned_cols=166 Identities=17% Similarity=0.170 Sum_probs=92.5
Q ss_pred cChHHHHHHHHHHHHhc------CCccEEEEEeCcchHHHHHHHHhCC---CccceEEEeeCCCCCcch------hhh-h
Q 023683 87 LGSDEVGRVLGQVIDTF------NLAPVHLVLHDSALPMSANWVAENP---GSVKSLTLLDTGIKPALP------LFA-L 150 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l------~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~~~~------~~~-~ 150 (279)
|+++++++...++++++ ...+++|+|||.|+++++++..+++ .+|++++++-|.+..... ... .
T Consensus 59 ~sL~~QI~hk~~~i~~~~~~~~~~~~~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi~~ia~Sp~G~~l~~~~ 138 (266)
T PF10230_consen 59 FSLQDQIEHKIDFIKELIPQKNKPNVKLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTIEDIAKSPNGRRLTPLL 138 (266)
T ss_pred cCHHHHHHHHHHHHHHHhhhhcCCCCcEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCccccccCCchhHHHHHHH
Confidence 68888888888777663 3367999999999999999999999 789999999998532111 110 0
Q ss_pred -hhh---HHH---Hhhh-cCh-hHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhh-ccccccccccccccc
Q 023683 151 -NLP---LIR---DFVL-GSS-FGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRK-LNNSFDMAEWGSSEG 220 (279)
Q Consensus 151 -~~~---~~~---~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 220 (279)
..+ .+. ..+. -.+ .+..+++...... ++.........+.++...+..+.+.+. +..-.... ......
T Consensus 139 ~~~~~~~~~~~~~~~l~~~lP~~~~~~lv~~~~~~--~~~~~~~t~~~l~~~~~v~qaL~Ma~~Em~~I~~~d-~~~~~~ 215 (266)
T PF10230_consen 139 FSPPPLVWLASFLSFLLSLLPESVLRWLVRWVMGF--PPPAVEATTKFLLSPRVVRQALYMARDEMREIREDD-NDELIK 215 (266)
T ss_pred hhccHHHHHHHHHHHHHHHCCHHHHHHHHHHHcCC--ChHHHHHHHHHhcCHHHHHHHHHHHHHHHHHccCcc-hHHHHH
Confidence 000 000 0111 111 2222333222221 223444444555555555555444332 11110011 011111
Q ss_pred c---cCCCEEEEeeCCCCcccc--hhHHHHHhhCCC--CcEEEe
Q 023683 221 I---KGIPMQILWSSVWSKEWS--EEGSRVADALPQ--AKFVGH 257 (279)
Q Consensus 221 ~---~~~Pvlii~G~~d~~~~~--~~~~~~~~~~~~--~~~~~i 257 (279)
. ...++.+..|. .|.|+ +..+.+.+..|+ .++.+-
T Consensus 216 ~~~~~~~kl~f~fg~--~D~Wvp~~~~~~l~~~~~~~~~~~~v~ 257 (266)
T PF10230_consen 216 HHNENGDKLWFYFGQ--NDHWVPNETRDELIERYPGHEPDVVVD 257 (266)
T ss_pred HhccCCCEEEEEEeC--CCCCCCHHHHHHHHHHcCCCCCeEEEe
Confidence 1 15788999999 46666 777899999984 344433
No 98
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.80 E-value=1.7e-07 Score=77.96 Aligned_cols=173 Identities=12% Similarity=0.017 Sum_probs=92.1
Q ss_pred HHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCC-cchhhhh----hhhHHHHhhhcChhHHHHHH
Q 023683 96 LGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP-ALPLFAL----NLPLIRDFVLGSSFGYQWLI 170 (279)
Q Consensus 96 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~ 170 (279)
|..+++..|..++.+.|.||||.+|...|+.+|..|..+-.+++.... .+..-.+ ....+.+.+. ...+.+. .
T Consensus 165 Ll~Wl~~~G~~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sAs~vFt~Gvls~~i~W~~L~~q~~-~~~~~~~-~ 242 (348)
T PF09752_consen 165 LLHWLEREGYGPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSASVVFTEGVLSNSINWDALEKQFE-DTVYEEE-I 242 (348)
T ss_pred HHHHHHhcCCCceEEEEechhHhhHHhhhhcCCCceeEEEeecccCCCcchhhhhhhcCCCHHHHHHHhc-ccchhhh-h
Confidence 445566668899999999999999999999999877766666665321 1111000 0111111100 0000000 0
Q ss_pred HHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccc-cccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhC
Q 023683 171 RFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNS-FDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADAL 249 (279)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~ 249 (279)
..+.......................+++.+-.. .....+. ...-.-.+.+|.+++|...+......+.+.+
T Consensus 243 -----~~~~~~~~~~~~~~~~~~~~~~Ea~~~m~~~md~~T~l~nf~--~P~dp~~ii~V~A~~DaYVPr~~v~~Lq~~W 315 (348)
T PF09752_consen 243 -----SDIPAQNKSLPLDSMEERRRDREALRFMRGVMDSFTHLTNFP--VPVDPSAIIFVAAKNDAYVPRHGVLSLQEIW 315 (348)
T ss_pred -----cccccCcccccchhhccccchHHHHHHHHHHHHhhccccccC--CCCCCCcEEEEEecCceEechhhcchHHHhC
Confidence 0000000000000001111112222222221111 1111111 1122355788888877666667777999999
Q ss_pred CCCcEEEecCCCCC-CCcchHHHHHHHhh
Q 023683 250 PQAKFVGHSGGRWP-QTSRGRAHTRAYTE 277 (279)
Q Consensus 250 ~~~~~~~i~~gH~~-~~e~p~~~~~~i~~ 277 (279)
|++++.++++||.- ++-+.+.|.+.|.+
T Consensus 316 PGsEvR~l~gGHVsA~L~~q~~fR~AI~D 344 (348)
T PF09752_consen 316 PGSEVRYLPGGHVSAYLLHQEAFRQAIYD 344 (348)
T ss_pred CCCeEEEecCCcEEEeeechHHHHHHHHH
Confidence 99999999999984 66777888888865
No 99
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=98.77 E-value=2.5e-08 Score=91.95 Aligned_cols=39 Identities=13% Similarity=-0.024 Sum_probs=33.8
Q ss_pred ChHHHHHHHHHHHHhcC----------------CccEEEEEeCcchHHHHHHHHh
Q 023683 88 GSDEVGRVLGQVIDTFN----------------LAPVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~----------------~~~~~lvGhS~Gg~ia~~~a~~ 126 (279)
++++.+.|+..++..++ ..+++++||||||.++..++..
T Consensus 521 n~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 521 NLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred CHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 68899999998887776 3589999999999999999975
No 100
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.73 E-value=5.8e-07 Score=70.87 Aligned_cols=55 Identities=20% Similarity=0.123 Sum_probs=40.7
Q ss_pred ChHHHHHHHHHHH-HhcCCccEEEEEeCcchHHHHHHHHh---CCCccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVI-DTFNLAPVHLVLHDSALPMSANWVAE---NPGSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l-~~l~~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~ 142 (279)
+.+++++.+...+ ...+..+++++|||+||.++..++.+ .++.+.+++++++..+
T Consensus 45 ~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~a~~l~~~~~~~~~l~~~~~~~~ 103 (212)
T smart00824 45 SADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAVAARLEARGIPPAAVVLLDTYPP 103 (212)
T ss_pred CHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHHHHHHHhCCCCCcEEEEEccCCC
Confidence 3555565554433 34456789999999999999998875 4567999999987654
No 101
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.73 E-value=1.1e-07 Score=75.93 Aligned_cols=47 Identities=13% Similarity=0.039 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHh---cC---CccEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 023683 90 DEVGRVLGQVIDT---FN---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLL 137 (279)
Q Consensus 90 ~~~~~~l~~~l~~---l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 137 (279)
+...+++...++. .. .+++.++|.||||.+++.+|... ..+++.|..
T Consensus 76 ~~~~~~~~aa~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~ 128 (218)
T PF01738_consen 76 EQVAADLQAAVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD-PRVDAAVSF 128 (218)
T ss_dssp HHHHHHHHHHHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEE
T ss_pred HHHHHHHHHHHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc-cccceEEEE
Confidence 3455555443333 33 36899999999999999999877 568888765
No 102
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.71 E-value=4e-07 Score=75.33 Aligned_cols=83 Identities=14% Similarity=0.037 Sum_probs=54.5
Q ss_pred hhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhccc
Q 023683 5 LRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVKV 84 (279)
Q Consensus 5 l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (279)
|.++||.|+..|.||.|.|+.. .... ...+
T Consensus 53 ~~~~GY~vV~~D~RG~g~S~G~---------------~~~~---------------------~~~e-------------- 82 (272)
T PF02129_consen 53 FAERGYAVVVQDVRGTGGSEGE---------------FDPM---------------------SPNE-------------- 82 (272)
T ss_dssp HHHTT-EEEEEE-TTSTTS-S----------------B-TT---------------------SHHH--------------
T ss_pred HHhCCCEEEEECCcccccCCCc---------------cccC---------------------ChhH--------------
Confidence 8899999999999999999882 1100 0000
Q ss_pred cccChHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 85 IELGSDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 85 ~~~~~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
.+|.. ++.+++.+... .+|-++|.|++|..++..|+..|..+++++...+...
T Consensus 83 ----~~D~~-d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~~~d 137 (272)
T PF02129_consen 83 ----AQDGY-DTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSGWSD 137 (272)
T ss_dssp ----HHHHH-HHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE-SB
T ss_pred ----HHHHH-HHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEecccCCc
Confidence 22222 22233433343 5899999999999999999988889999999877643
No 103
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=98.69 E-value=1.4e-07 Score=72.02 Aligned_cols=118 Identities=20% Similarity=0.223 Sum_probs=74.1
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHH-HhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHH
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWV-AENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGY 166 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a-~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (279)
+.+++.+.+.+.+.... ++++|||||+|+..++.++ .....+|.+++|++|+......
T Consensus 38 ~~~~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~~~~~~~v~g~lLVAp~~~~~~~-------------------- 96 (171)
T PF06821_consen 38 DLDEWVQALDQAIDAID-EPTILVAHSLGCLTALRWLAEQSQKKVAGALLVAPFDPDDPE-------------------- 96 (171)
T ss_dssp -HHHHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHHHHHTCCSSEEEEEEES--SCGCHH--------------------
T ss_pred CHHHHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHhhcccccccEEEEEcCCCccccc--------------------
Confidence 35555555555555443 6799999999999999999 7788899999999986542000
Q ss_pred HHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHH
Q 023683 167 QWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVA 246 (279)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~ 246 (279)
. ..+ .... +. ..+ .....+|.++|.+++|...+.+..++++
T Consensus 97 ---------~-~~~-~~~~----f~-------------~~p-----------~~~l~~~~~viaS~nDp~vp~~~a~~~A 137 (171)
T PF06821_consen 97 ---------P-FPP-ELDG----FT-------------PLP-----------RDPLPFPSIVIASDNDPYVPFERAQRLA 137 (171)
T ss_dssp ---------C-CTC-GGCC----CT-------------TSH-----------CCHHHCCEEEEEETTBSSS-HHHHHHHH
T ss_pred ---------c-hhh-hccc----cc-------------cCc-----------ccccCCCeEEEEcCCCCccCHHHHHHHH
Confidence 0 000 0000 00 000 1123467799999987777778899999
Q ss_pred hhCCCCcEEEe-cCCCCCCCc
Q 023683 247 DALPQAKFVGH-SGGRWPQTS 266 (279)
Q Consensus 247 ~~~~~~~~~~i-~~gH~~~~e 266 (279)
+.+. ++++.+ ++||+.-.+
T Consensus 138 ~~l~-a~~~~~~~~GHf~~~~ 157 (171)
T PF06821_consen 138 QRLG-AELIILGGGGHFNAAS 157 (171)
T ss_dssp HHHT--EEEEETS-TTSSGGG
T ss_pred HHcC-CCeEECCCCCCccccc
Confidence 9884 889999 699997644
No 104
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.64 E-value=1.2e-06 Score=70.98 Aligned_cols=55 Identities=18% Similarity=0.080 Sum_probs=44.6
Q ss_pred ChHHHHHHHHHHHHh-cCCccEEEEEeCcchHHHHHHHHh---CCCccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVIDT-FNLAPVHLVLHDSALPMSANWVAE---NPGSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~-l~~~~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~~~ 142 (279)
+++++++...+.|.+ ....+++|+|||+||.+|..+|.+ ..+.|..|+++++..+
T Consensus 46 ~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~evA~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 46 SLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEVAAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred CHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHHHHHHHhCCCeEEEEEEeccCCC
Confidence 577777776655544 456799999999999999999964 3557999999999877
No 105
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.62 E-value=1.5e-06 Score=67.20 Aligned_cols=54 Identities=15% Similarity=0.108 Sum_probs=45.3
Q ss_pred cChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCC
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP 143 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 143 (279)
.+.++..+.+.++++....+.+.|||.||||+.|..+|.+++- ++ ||++|+..+
T Consensus 40 ~~p~~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~La~~~~~--~a-vLiNPav~p 93 (187)
T PF05728_consen 40 PFPEEAIAQLEQLIEELKPENVVLIGSSLGGFYATYLAERYGL--PA-VLINPAVRP 93 (187)
T ss_pred cCHHHHHHHHHHHHHhCCCCCeEEEEEChHHHHHHHHHHHhCC--CE-EEEcCCCCH
Confidence 4567778888899998887779999999999999999998863 44 899998763
No 106
>PRK10162 acetyl esterase; Provisional
Probab=98.57 E-value=3.8e-06 Score=71.10 Aligned_cols=54 Identities=9% Similarity=-0.029 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHhC------CCccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAEN------PGSVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~ 142 (279)
..+..+++.+..+.+++ ++++|+|+|+||.+++.++.+. +.+++++|++.|...
T Consensus 135 ~~~a~~~l~~~~~~~~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~ 196 (318)
T PRK10162 135 IVAVCCYFHQHAEDYGINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYG 196 (318)
T ss_pred HHHHHHHHHHhHHHhCCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccC
Confidence 44455556655666765 5899999999999999998643 357899999987643
No 107
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=98.51 E-value=4e-07 Score=72.37 Aligned_cols=47 Identities=2% Similarity=0.046 Sum_probs=35.6
Q ss_pred HHHHHHHHhc-C--CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 94 RVLGQVIDTF-N--LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 94 ~~l~~~l~~l-~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
+...+++... . -+++.|+|.|.||-+|+.+|..+| .|+++|.++|..
T Consensus 7 e~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~ 56 (213)
T PF08840_consen 7 EEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSS 56 (213)
T ss_dssp HHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--S
T ss_pred HHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCce
Confidence 3334444443 2 368999999999999999999999 699999999874
No 108
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=98.50 E-value=1.6e-06 Score=69.22 Aligned_cols=107 Identities=15% Similarity=0.113 Sum_probs=65.2
Q ss_pred CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHHHHHHHhhccCCCchhH
Q 023683 104 NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMKKVGSFDV 183 (279)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (279)
+.++++|.|.|.||++++.++.++|+.+.++|.+++..+... . .
T Consensus 103 ~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~~~---------------------------------~---~ 146 (216)
T PF02230_consen 103 DPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPPES---------------------------------E---L 146 (216)
T ss_dssp -GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TTGC---------------------------------C---C
T ss_pred ChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccccc---------------------------------c---c
Confidence 346899999999999999999999999999999987544110 0 0
Q ss_pred HhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHh----hCCCCcEEEec-
Q 023683 184 EDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVAD----ALPQAKFVGHS- 258 (279)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~----~~~~~~~~~i~- 258 (279)
. .. . .....+|+++++|+.|...+.+.++...+ ...+.+++.++
T Consensus 147 ~------~~-------------~------------~~~~~~pi~~~hG~~D~vvp~~~~~~~~~~L~~~~~~v~~~~~~g 195 (216)
T PF02230_consen 147 E------DR-------------P------------EALAKTPILIIHGDEDPVVPFEWAEKTAEFLKAAGANVEFHEYPG 195 (216)
T ss_dssp H------CC-------------H------------CCCCTS-EEEEEETT-SSSTHHHHHHHHHHHHCTT-GEEEEEETT
T ss_pred c------cc-------------c------------cccCCCcEEEEecCCCCcccHHHHHHHHHHHHhcCCCEEEEEcCC
Confidence 0 00 0 00115899999999876666644444443 33556778885
Q ss_pred CCCCCCCcchHHHHHHHhh
Q 023683 259 GGRWPQTSRGRAHTRAYTE 277 (279)
Q Consensus 259 ~gH~~~~e~p~~~~~~i~~ 277 (279)
+||.+..+.=..+.+.|.+
T Consensus 196 ~gH~i~~~~~~~~~~~l~~ 214 (216)
T PF02230_consen 196 GGHEISPEELRDLREFLEK 214 (216)
T ss_dssp -SSS--HHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHhh
Confidence 9999875444444444443
No 109
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.49 E-value=2.7e-06 Score=71.64 Aligned_cols=140 Identities=9% Similarity=-0.117 Sum_probs=70.5
Q ss_pred CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHHHHHHHhhccCCCchhHH
Q 023683 105 LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMKKVGSFDVE 184 (279)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (279)
-+++.+.|.|.||.+++.+|+..| +|++++..-|..-.....+.... ...+-..+.
T Consensus 174 ~~rI~v~G~SqGG~lal~~aaLd~-rv~~~~~~vP~l~d~~~~~~~~~-----------------------~~~~y~~~~ 229 (320)
T PF05448_consen 174 GKRIGVTGGSQGGGLALAAAALDP-RVKAAAADVPFLCDFRRALELRA-----------------------DEGPYPEIR 229 (320)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHSS-T-SEEEEESESSSSHHHHHHHT-------------------------STTTHHHH
T ss_pred cceEEEEeecCchHHHHHHHHhCc-cccEEEecCCCccchhhhhhcCC-----------------------ccccHHHHH
Confidence 368999999999999999999876 59998888775431111110000 001112222
Q ss_pred hHHHhhc-CcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCC-cEEEe-cCCC
Q 023683 185 DNRVLLK-GRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA-KFVGH-SGGR 261 (279)
Q Consensus 185 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~-~~~~i-~~gH 261 (279)
.+.+... ........++.+..+.. ......+++|+++-.|-.|...++...-...+.++.. ++.++ ..||
T Consensus 230 ~~~~~~d~~~~~~~~v~~~L~Y~D~-------~nfA~ri~~pvl~~~gl~D~~cPP~t~fA~yN~i~~~K~l~vyp~~~H 302 (320)
T PF05448_consen 230 RYFRWRDPHHEREPEVFETLSYFDA-------VNFARRIKCPVLFSVGLQDPVCPPSTQFAAYNAIPGPKELVVYPEYGH 302 (320)
T ss_dssp HHHHHHSCTHCHHHHHHHHHHTT-H-------HHHGGG--SEEEEEEETT-SSS-HHHHHHHHCC--SSEEEEEETT--S
T ss_pred HHHhccCCCcccHHHHHHHHhhhhH-------HHHHHHcCCCEEEEEecCCCCCCchhHHHHHhccCCCeeEEeccCcCC
Confidence 2222111 01111112222111111 1114567899999999988777777777778877644 45556 5888
Q ss_pred CCCCcc-hHHHHHHH
Q 023683 262 WPQTSR-GRAHTRAY 275 (279)
Q Consensus 262 ~~~~e~-p~~~~~~i 275 (279)
....+. -++..+.+
T Consensus 303 e~~~~~~~~~~~~~l 317 (320)
T PF05448_consen 303 EYGPEFQEDKQLNFL 317 (320)
T ss_dssp STTHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHHHH
Confidence 765443 34444333
No 110
>COG0400 Predicted esterase [General function prediction only]
Probab=98.49 E-value=1.7e-06 Score=67.92 Aligned_cols=122 Identities=11% Similarity=0.082 Sum_probs=87.2
Q ss_pred cChHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChh
Q 023683 87 LGSDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSF 164 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (279)
...+.+++-+..+.++.++ ++++++|+|-||++++.+..++|..++++|++++..+...
T Consensus 78 ~~~~~~~~~l~~~~~~~gi~~~~ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~------------------- 138 (207)
T COG0400 78 LETEKLAEFLEELAEEYGIDSSRIILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP------------------- 138 (207)
T ss_pred HHHHHHHHHHHHHHHHhCCChhheEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC-------------------
Confidence 3466677777777788777 7899999999999999999999999999999887655111
Q ss_pred HHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHH
Q 023683 165 GYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSR 244 (279)
Q Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~ 244 (279)
. .. ......|+++++|+.|...+.....+
T Consensus 139 ----------------~---------~~--------------------------~~~~~~pill~hG~~Dpvvp~~~~~~ 167 (207)
T COG0400 139 ----------------E---------LL--------------------------PDLAGTPILLSHGTEDPVVPLALAEA 167 (207)
T ss_pred ----------------c---------cc--------------------------cccCCCeEEEeccCcCCccCHHHHHH
Confidence 0 00 11235899999999765555544444
Q ss_pred HHhh----CCCCcEEEecCCCCCCCcchHHHHHHHhhc
Q 023683 245 VADA----LPQAKFVGHSGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 245 ~~~~----~~~~~~~~i~~gH~~~~e~p~~~~~~i~~f 278 (279)
+++. --+++.+++++||.+..+.-+...+.+.++
T Consensus 168 l~~~l~~~g~~v~~~~~~~GH~i~~e~~~~~~~wl~~~ 205 (207)
T COG0400 168 LAEYLTASGADVEVRWHEGGHEIPPEELEAARSWLANT 205 (207)
T ss_pred HHHHHHHcCCCEEEEEecCCCcCCHHHHHHHHHHHHhc
Confidence 4443 344556666899999877766666655543
No 111
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=98.44 E-value=2.4e-07 Score=61.10 Aligned_cols=25 Identities=28% Similarity=0.422 Sum_probs=22.6
Q ss_pred ChhhhhhcCccEEEecCCCCCCCCC
Q 023683 1 MINSLRSKKFNVIAVDLPGNGFSDR 25 (279)
Q Consensus 1 ~~~~l~~~G~~vi~~D~~G~G~S~~ 25 (279)
++..|.++||.|+++|+||||+|+.
T Consensus 35 ~a~~L~~~G~~V~~~D~rGhG~S~g 59 (79)
T PF12146_consen 35 LAEFLAEQGYAVFAYDHRGHGRSEG 59 (79)
T ss_pred HHHHHHhCCCEEEEECCCcCCCCCC
Confidence 3578899999999999999999986
No 112
>KOG2624 consensus Triglyceride lipase-cholesterol esterase [Lipid transport and metabolism]
Probab=98.35 E-value=1.1e-05 Score=69.54 Aligned_cols=98 Identities=18% Similarity=0.260 Sum_probs=67.7
Q ss_pred hhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhcc
Q 023683 4 SLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVK 83 (279)
Q Consensus 4 ~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
.|+..||+|..-..||.-.|.+..... +.. .--||.|. +.+.-
T Consensus 101 ~LadaGYDVWLgN~RGn~ySr~h~~l~----------~~~-------~~~FW~FS---------~~Em~----------- 143 (403)
T KOG2624|consen 101 LLADAGYDVWLGNNRGNTYSRKHKKLS----------PSS-------DKEFWDFS---------WHEMG----------- 143 (403)
T ss_pred HHHHcCCceeeecCcCcccchhhcccC----------CcC-------Ccceeecc---------hhhhh-----------
Confidence 477899999999999988887631111 110 01145432 22211
Q ss_pred ccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCC---ccceEEEeeCCCCC
Q 023683 84 VIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTGIKP 143 (279)
Q Consensus 84 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~ 143 (279)
.||+..+. ..+++.-+-++++.||||.|+.+........|+ +|+.+++++|....
T Consensus 144 --~yDLPA~I---dyIL~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~~~ 201 (403)
T KOG2624|consen 144 --TYDLPAMI---DYILEKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAAFP 201 (403)
T ss_pred --hcCHHHHH---HHHHHhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchhhh
Confidence 24444444 445566677899999999999999999988876 79999999998643
No 113
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.34 E-value=1.1e-05 Score=60.42 Aligned_cols=116 Identities=16% Similarity=0.103 Sum_probs=79.6
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHH
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQ 167 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (279)
+.+++++.+.+.+... -++++||+||+|+..+++++.+....|.++.|++|+-......+
T Consensus 42 ~~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~~~~~~V~GalLVAppd~~~~~~~------------------- 101 (181)
T COG3545 42 VLDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAEHIQRQVAGALLVAPPDVSRPEIR------------------- 101 (181)
T ss_pred CHHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHHhhhhccceEEEecCCCccccccc-------------------
Confidence 5777777777777666 36799999999999999999887779999999988644111000
Q ss_pred HHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHh
Q 023683 168 WLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVAD 247 (279)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~ 247 (279)
......+. +.. .....-|.+++...+|.....+.++.+++
T Consensus 102 ----------------~~~~~tf~---------------~~p---------~~~lpfps~vvaSrnDp~~~~~~a~~~a~ 141 (181)
T COG3545 102 ----------------PKHLMTFD---------------PIP---------REPLPFPSVVVASRNDPYVSYEHAEDLAN 141 (181)
T ss_pred ----------------hhhccccC---------------CCc---------cccCCCceeEEEecCCCCCCHHHHHHHHH
Confidence 00000000 000 11234789999999877777799999999
Q ss_pred hCCCCcEEEe-cCCCCCC
Q 023683 248 ALPQAKFVGH-SGGRWPQ 264 (279)
Q Consensus 248 ~~~~~~~~~i-~~gH~~~ 264 (279)
.++ +.++.. ++||+--
T Consensus 142 ~wg-s~lv~~g~~GHiN~ 158 (181)
T COG3545 142 AWG-SALVDVGEGGHINA 158 (181)
T ss_pred hcc-Hhheecccccccch
Confidence 888 445555 7899754
No 114
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=98.29 E-value=2.7e-06 Score=70.00 Aligned_cols=44 Identities=18% Similarity=0.027 Sum_probs=36.4
Q ss_pred HHHHHHhcCC--ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 96 LGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 96 l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
+...+..++. +.+++.|+|.||.-+..+|..||+ |+++||-++.
T Consensus 299 vQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDAtF 344 (517)
T KOG1553|consen 299 VQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDATF 344 (517)
T ss_pred HHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeecch
Confidence 3344566664 679999999999999999999998 8999987776
No 115
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.28 E-value=8.7e-06 Score=66.08 Aligned_cols=56 Identities=11% Similarity=0.140 Sum_probs=41.4
Q ss_pred ChHHHHHHHHHHHHh----cCCccEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeeCCCCC
Q 023683 88 GSDEVGRVLGQVIDT----FNLAPVHLVLHDSALPMSANWVAENPG-----SVKSLTLLDTGIKP 143 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~ 143 (279)
+....+.++..++.. .+++++.+|||||||.+++.|+..+.. .++++|.++++...
T Consensus 81 ~~~~qa~wl~~vl~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng 145 (255)
T PF06028_consen 81 NYKKQAKWLKKVLKYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNG 145 (255)
T ss_dssp HHHHHHHHHHHHHHHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTT
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCc
Confidence 466677777766654 578899999999999999999987532 58999999997654
No 116
>PRK10115 protease 2; Provisional
Probab=98.28 E-value=4.1e-05 Score=71.31 Aligned_cols=55 Identities=2% Similarity=-0.149 Sum_probs=45.8
Q ss_pred ChHHHHHHHHHHHHhc--CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVIDTF--NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
+++|+++.+..+++.- .-+++.+.|.|.||.++...+.++|++++++|...|...
T Consensus 504 ~~~D~~a~~~~Lv~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~D 560 (686)
T PRK10115 504 TFNDYLDACDALLKLGYGSPSLCYGMGGSAGGMLMGVAINQRPELFHGVIAQVPFVD 560 (686)
T ss_pred cHHHHHHHHHHHHHcCCCChHHeEEEEECHHHHHHHHHHhcChhheeEEEecCCchh
Confidence 6888888888777652 236899999999999999999999999999998877644
No 117
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.23 E-value=4.2e-05 Score=61.76 Aligned_cols=47 Identities=15% Similarity=0.066 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHhc---C---CccEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 023683 90 DEVGRVLGQVIDTF---N---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLL 137 (279)
Q Consensus 90 ~~~~~~l~~~l~~l---~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 137 (279)
.+...|+...++.+ . .+++.++|.||||.+++.++.+.| .|++.+..
T Consensus 90 ~~~~~d~~a~~~~L~~~~~~~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~f 142 (236)
T COG0412 90 AEVLADIDAALDYLARQPQVDPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAF 142 (236)
T ss_pred HHHHHHHHHHHHHHHhCCCCCCceEEEEEEcccHHHHHHhhcccC-CccEEEEe
Confidence 45556665555443 2 467999999999999999999887 57777755
No 118
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.22 E-value=1.6e-05 Score=63.01 Aligned_cols=53 Identities=8% Similarity=0.102 Sum_probs=39.1
Q ss_pred hHHHHHHHHHHHHh-----cCCccEEEEEeCcchHHHHHHHHhCCC----ccceEEEeeCCC
Q 023683 89 SDEVGRVLGQVIDT-----FNLAPVHLVLHDSALPMSANWVAENPG----SVKSLTLLDTGI 141 (279)
Q Consensus 89 ~~~~~~~l~~~l~~-----l~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~ 141 (279)
++|..+.+.-+++. .+.++++|+|+|-||.+++.++....+ .++++++++|..
T Consensus 49 ~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SAGg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 49 LEDVKAAYRWLLKNADKLGIDPERIVLIGDSAGGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp HHHHHHHHHHHHHTHHHHTEEEEEEEEEEETHHHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccccccceeeeccccccccccccceEEeecccccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 45555555555555 445789999999999999999874332 489999999954
No 119
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.19 E-value=1.8e-05 Score=63.20 Aligned_cols=128 Identities=8% Similarity=-0.114 Sum_probs=70.5
Q ss_pred cCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHHHHHHHhhccCCCchh
Q 023683 103 FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMKKVGSFD 182 (279)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (279)
.+-+++.+-|.|.||.+++..++..| +|++++..=|........+.. ... -+-.+
T Consensus 173 vde~Ri~v~G~SqGGglalaaaal~~-rik~~~~~~Pfl~df~r~i~~--------~~~----------------~~yde 227 (321)
T COG3458 173 VDEERIGVTGGSQGGGLALAAAALDP-RIKAVVADYPFLSDFPRAIEL--------ATE----------------GPYDE 227 (321)
T ss_pred cchhheEEeccccCchhhhhhhhcCh-hhhcccccccccccchhheee--------ccc----------------CcHHH
Confidence 34468999999999999999988766 688888765543321111110 000 01111
Q ss_pred HHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-c-CC
Q 023683 183 VEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-S-GG 260 (279)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~-~g 260 (279)
+..|.+..... ....+..+..+.. ..+...+++|+|+..|-.|...++...-.+.+.++..+...+ + -+
T Consensus 228 i~~y~k~h~~~--e~~v~~TL~yfD~-------~n~A~RiK~pvL~svgL~D~vcpPstqFA~yN~l~~~K~i~iy~~~a 298 (321)
T COG3458 228 IQTYFKRHDPK--EAEVFETLSYFDI-------VNLAARIKVPVLMSVGLMDPVCPPSTQFAAYNALTTSKTIEIYPYFA 298 (321)
T ss_pred HHHHHHhcCch--HHHHHHHHhhhhh-------hhHHHhhccceEEeecccCCCCCChhhHHHhhcccCCceEEEeeccc
Confidence 11111111100 1111111111111 112445789999999997777777777778888877665444 3 45
Q ss_pred CCCC
Q 023683 261 RWPQ 264 (279)
Q Consensus 261 H~~~ 264 (279)
|.-.
T Consensus 299 He~~ 302 (321)
T COG3458 299 HEGG 302 (321)
T ss_pred cccC
Confidence 7644
No 120
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=98.19 E-value=1.4e-05 Score=64.10 Aligned_cols=52 Identities=17% Similarity=0.180 Sum_probs=38.3
Q ss_pred HHHHHHHHHHhc-----CCccEEEEEeCcchHHHHHHHHhCC---CccceEEEeeCCCCC
Q 023683 92 VGRVLGQVIDTF-----NLAPVHLVLHDSALPMSANWVAENP---GSVKSLTLLDTGIKP 143 (279)
Q Consensus 92 ~~~~l~~~l~~l-----~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~~~~ 143 (279)
+.+.+..+++.+ +.++++||||||||.++..++...+ +.|+.+|.++++...
T Consensus 66 ~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g 125 (225)
T PF07819_consen 66 LAEAIKYILELYKSNRPPPRSVILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRG 125 (225)
T ss_pred HHHHHHHHHHhhhhccCCCCceEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCC
Confidence 333444444444 4578999999999999998876543 579999999988543
No 121
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.17 E-value=5.6e-06 Score=66.71 Aligned_cols=38 Identities=18% Similarity=0.119 Sum_probs=33.6
Q ss_pred CCccEEEEEeCcchHHHHHHHHhC-----CCccceEEEeeCCC
Q 023683 104 NLAPVHLVLHDSALPMSANWVAEN-----PGSVKSLTLLDTGI 141 (279)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~~ 141 (279)
+..++.|.|||-||-++..++..+ +.+++++|+++|..
T Consensus 89 D~s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 89 DFSKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred cccceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 456899999999999999999887 56899999999965
No 122
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=98.11 E-value=3.4e-05 Score=64.30 Aligned_cols=43 Identities=14% Similarity=0.154 Sum_probs=29.0
Q ss_pred cCCCEEEEeeCCCCcccchhH----HHHHhhC-CCCcEEEe-cCCCCCC
Q 023683 222 KGIPMQILWSSVWSKEWSEEG----SRVADAL-PQAKFVGH-SGGRWPQ 264 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~~~~----~~~~~~~-~~~~~~~i-~~gH~~~ 264 (279)
.+.|+++.+|..|...+.... +++++.- .+++++.+ ..+|...
T Consensus 218 P~~Pv~i~~g~~D~vvP~~~~~~l~~~~c~~G~a~V~~~~~~~~~H~~~ 266 (290)
T PF03583_consen 218 PTVPVLIYQGTADEVVPPADTDALVAKWCAAGGADVEYVRYPGGGHLGA 266 (290)
T ss_pred CCCCEEEEecCCCCCCChHHHHHHHHHHHHcCCCCEEEEecCCCChhhh
Confidence 579999999998877776444 4444444 34556666 4789753
No 123
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.02 E-value=0.00018 Score=53.08 Aligned_cols=52 Identities=12% Similarity=0.029 Sum_probs=42.6
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
...+...+.++...+.-.+.++-||||||-++..++..-...|.+|++++=+
T Consensus 72 ~~~~~~~~aql~~~l~~gpLi~GGkSmGGR~aSmvade~~A~i~~L~clgYP 123 (213)
T COG3571 72 NPEYIVAIAQLRAGLAEGPLIIGGKSMGGRVASMVADELQAPIDGLVCLGYP 123 (213)
T ss_pred CHHHHHHHHHHHhcccCCceeeccccccchHHHHHHHhhcCCcceEEEecCc
Confidence 4556777788888887789999999999999999987666669999988644
No 124
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=97.98 E-value=2.9e-05 Score=61.75 Aligned_cols=114 Identities=18% Similarity=0.141 Sum_probs=64.4
Q ss_pred ChHHHHHHHHHHHHhcCCcc-EEEEEeCcchHHHHHHHHhC--------CCccceEEEeeCCCCCcchhhhhhhhHHHHh
Q 023683 88 GSDEVGRVLGQVIDTFNLAP-VHLVLHDSALPMSANWVAEN--------PGSVKSLTLLDTGIKPALPLFALNLPLIRDF 158 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~-~~lvGhS~Gg~ia~~~a~~~--------p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~ 158 (279)
.+++-.+.|.+.++..| + .-|+|.|.||.+|..++... ...++-+|++++..+....
T Consensus 85 ~~~~sl~~l~~~i~~~G--PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~~~------------ 150 (212)
T PF03959_consen 85 GLDESLDYLRDYIEENG--PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPDPD------------ 150 (212)
T ss_dssp --HHHHHHHHHHHHHH-----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EEE-------------
T ss_pred CHHHHHHHHHHHHHhcC--CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCchh------------
Confidence 46777777777777765 4 44999999999999888532 1246777777664441110
Q ss_pred hhcChhHHHHHHHHhhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCccc
Q 023683 159 VLGSSFGYQWLIRFCCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEW 238 (279)
Q Consensus 159 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~ 238 (279)
+.... ....+++|+|.|+|++|....
T Consensus 151 --------------------------------------------~~~~~----------~~~~i~iPtlHv~G~~D~~~~ 176 (212)
T PF03959_consen 151 --------------------------------------------YQELY----------DEPKISIPTLHVIGENDPVVP 176 (212)
T ss_dssp --------------------------------------------GTTTT------------TT---EEEEEEETT-SSS-
T ss_pred --------------------------------------------hhhhh----------ccccCCCCeEEEEeCCCCCcc
Confidence 00000 134468999999999766555
Q ss_pred chhHHHHHhhCCC-CcEEEecCCCCCCCcchH
Q 023683 239 SEEGSRVADALPQ-AKFVGHSGGRWPQTSRGR 269 (279)
Q Consensus 239 ~~~~~~~~~~~~~-~~~~~i~~gH~~~~e~p~ 269 (279)
.+..+.+.+.+.+ .+++..++||.++...++
T Consensus 177 ~~~s~~L~~~~~~~~~v~~h~gGH~vP~~~~~ 208 (212)
T PF03959_consen 177 PERSEALAEMFDPDARVIEHDGGHHVPRKKED 208 (212)
T ss_dssp HHHHHHHHHHHHHHEEEEEESSSSS----HHH
T ss_pred hHHHHHHHHhccCCcEEEEECCCCcCcCChhh
Confidence 5678888888777 676667999999876543
No 125
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.91 E-value=0.00015 Score=57.29 Aligned_cols=82 Identities=17% Similarity=0.144 Sum_probs=44.5
Q ss_pred hhhhhhcCccEEEecCCCC-CCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhh
Q 023683 2 INSLRSKKFNVIAVDLPGN-GFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERK 80 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~-G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (279)
+.+|+.+||+|+.||..-| |.|+.. -+
T Consensus 50 A~YL~~NGFhViRyDsl~HvGlSsG~---------------I~------------------------------------- 77 (294)
T PF02273_consen 50 AEYLSANGFHVIRYDSLNHVGLSSGD---------------IN------------------------------------- 77 (294)
T ss_dssp HHHHHTTT--EEEE---B--------------------------------------------------------------
T ss_pred HHHHhhCCeEEEeccccccccCCCCC---------------hh-------------------------------------
Confidence 5678899999999999877 778772 11
Q ss_pred hccccccChHHHHHHHHHH---HHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 81 SVKVIELGSDEVGRVLGQV---IDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 81 ~~~~~~~~~~~~~~~l~~~---l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
++++....+++..+ ++..|..++-|++-|+.|-+|+..|.+ + .+.-+|..-+..+
T Consensus 78 -----eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSaRIAy~Va~~-i-~lsfLitaVGVVn 135 (294)
T PF02273_consen 78 -----EFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSARIAYEVAAD-I-NLSFLITAVGVVN 135 (294)
T ss_dssp --------HHHHHHHHHHHHHHHHHTT---EEEEEETTHHHHHHHHTTT-S---SEEEEES--S-
T ss_pred -----hcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhHHHHHHHhhc-c-CcceEEEEeeeee
Confidence 24666666666654 456778899999999999999999984 3 3666666544333
No 126
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=97.84 E-value=3.4e-05 Score=61.15 Aligned_cols=49 Identities=12% Similarity=0.222 Sum_probs=33.9
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeC
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 139 (279)
..++++-|.+++..-+. +|.||||||||.++..+.... .-++..+-+.+
T Consensus 59 ~~~l~~fI~~Vl~~TGa-kVDIVgHS~G~~iaR~yi~~~-~~~d~~~~lg~ 107 (219)
T PF01674_consen 59 AKQLRAFIDAVLAYTGA-KVDIVGHSMGGTIARYYIKGG-GGADKVVNLGP 107 (219)
T ss_dssp HHHHHHHHHHHHHHHT---EEEEEETCHHHHHHHHHHHC-TGGGTEEE---
T ss_pred HHHHHHHHHHHHHhhCC-EEEEEEcCCcCHHHHHHHHHc-CCCCcccCccc
Confidence 56777778888888898 999999999999999887643 33444444444
No 127
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=97.83 E-value=7.6e-05 Score=66.27 Aligned_cols=56 Identities=9% Similarity=0.007 Sum_probs=40.7
Q ss_pred ChHHHHHHHHHHHHh-------cCCccEEEEEeCcchHHHHHHHHhC----------CCccceEEEeeCCCCC
Q 023683 88 GSDEVGRVLGQVIDT-------FNLAPVHLVLHDSALPMSANWVAEN----------PGSVKSLTLLDTGIKP 143 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~----------p~~v~~lvl~~~~~~~ 143 (279)
+.++.++++.++++. ++..+++|+||||||..+..+|.+- +-.++++++.++...+
T Consensus 146 ~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~dp 218 (462)
T PTZ00472 146 NESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLTDP 218 (462)
T ss_pred ChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEeccccCh
Confidence 356667777766653 3457999999999999998888642 1247899998887543
No 128
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=97.82 E-value=0.00054 Score=60.25 Aligned_cols=57 Identities=18% Similarity=0.085 Sum_probs=38.6
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhC--------------------------CCCcEEEe-cCCCCCCCcchHHHHHHH
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADAL--------------------------PQAKFVGH-SGGRWPQTSRGRAHTRAY 275 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~--------------------------~~~~~~~i-~~gH~~~~e~p~~~~~~i 275 (279)
.++||+.+|..|...+.-..+.+.+.+ .+.+++.+ ++||+++.++|+..-+.+
T Consensus 330 ~irVLiy~Gd~D~i~n~~Gt~~~i~~L~w~~~~~f~~~~~~~~~~~~G~~k~~~~ltf~~V~~AGHmvP~dqP~~a~~m~ 409 (415)
T PF00450_consen 330 GIRVLIYNGDLDLICNFLGTERWIDNLNWSGKDGFRQWPRKVNGQVAGYVKQYGNLTFVTVRGAGHMVPQDQPEAALQMF 409 (415)
T ss_dssp T-EEEEEEETT-SSS-HHHHHHHHHCTECTEEEEEEEEEEETTCSEEEEEEEETTEEEEEETT--SSHHHHSHHHHHHHH
T ss_pred cceeEEeccCCCEEEEeccchhhhhccccCcccccccccccccccccceeEEeccEEEEEEcCCcccChhhCHHHHHHHH
Confidence 489999999977655554444444433 23446677 899999999999999999
Q ss_pred hhcC
Q 023683 276 TEDV 279 (279)
Q Consensus 276 ~~fl 279 (279)
.+||
T Consensus 410 ~~fl 413 (415)
T PF00450_consen 410 RRFL 413 (415)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 9885
No 129
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.79 E-value=3.8e-05 Score=57.72 Aligned_cols=51 Identities=10% Similarity=0.027 Sum_probs=36.3
Q ss_pred HHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCC----ccceEEEeeCCCC
Q 023683 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG----SVKSLTLLDTGIK 142 (279)
Q Consensus 92 ~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~ 142 (279)
+...+.+.+...+..+++++|||+||.+|..++...+. .+..++.++++..
T Consensus 14 i~~~~~~~~~~~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~ 68 (153)
T cd00741 14 VLPLLKSALAQYPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRV 68 (153)
T ss_pred HHHHHHHHHHHCCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcc
Confidence 33334444444467899999999999999999887654 5667777777644
No 130
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.66 E-value=0.001 Score=62.62 Aligned_cols=56 Identities=9% Similarity=0.023 Sum_probs=43.3
Q ss_pred cChHHHHHHHHHHHHhcC--CccEEEEEeCcchHHHHHHHHhCCCccceE-EEeeCCCC
Q 023683 87 LGSDEVGRVLGQVIDTFN--LAPVHLVLHDSALPMSANWVAENPGSVKSL-TLLDTGIK 142 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l-vl~~~~~~ 142 (279)
+..+|+...+..+++..- -+++.+.|+|+||.+++..+...|+.+-+. +.++|...
T Consensus 587 ~ev~D~~~~~~~~~~~~~iD~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVtd 645 (755)
T KOG2100|consen 587 VEVKDQIEAVKKVLKLPFIDRSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVTD 645 (755)
T ss_pred cchHHHHHHHHHHHhcccccHHHeEEeccChHHHHHHHHhhhCcCceEEEEEEecceee
Confidence 357777777777776643 368999999999999999999998655555 88888654
No 131
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=97.65 E-value=0.00013 Score=64.92 Aligned_cols=52 Identities=10% Similarity=-0.048 Sum_probs=43.7
Q ss_pred ChHHHHHHHHHHHHhcC---CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeC
Q 023683 88 GSDEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 139 (279)
.++|+++-+.-+.++.| .++|.+-|||+||.+++...+++|+-++..|.-+|
T Consensus 706 E~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~IfrvAIAGap 760 (867)
T KOG2281|consen 706 EVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPNIFRVAIAGAP 760 (867)
T ss_pred eehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcceeeEEeccCc
Confidence 58899999998888875 47899999999999999999999997766554433
No 132
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=97.62 E-value=0.00029 Score=59.71 Aligned_cols=33 Identities=6% Similarity=-0.183 Sum_probs=24.9
Q ss_pred ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeC
Q 023683 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (279)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 139 (279)
++|.++|+||||..++.+|+.- ++|+..|..+.
T Consensus 226 ~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~ 258 (390)
T PF12715_consen 226 DRIGCMGFSMGGYRAWWLAALD-DRIKATVANGY 258 (390)
T ss_dssp EEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-
T ss_pred cceEEEeecccHHHHHHHHHcc-hhhHhHhhhhh
Confidence 6899999999999999999875 46888776644
No 133
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.58 E-value=0.00077 Score=60.19 Aligned_cols=86 Identities=14% Similarity=0.098 Sum_probs=60.7
Q ss_pred hhhhcCccEEEecCCCCCCCCCchhhhhhhcccccccccccchhhhccccccccccchhccCCchhHHhhhhhhhhhhcc
Q 023683 4 SLRSKKFNVIAVDLPGNGFSDRSRMEFEERSDGAFQRFKDVYGLIQEKGFFWAFDQIVETGQIPYEEILKARVLERKSVK 83 (279)
Q Consensus 4 ~l~~~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (279)
.++.+||.||..|.||.|.|+.. -+.+. . .+
T Consensus 75 ~~aa~GYavV~qDvRG~~~SeG~---------------~~~~~--------------------~-~E------------- 105 (563)
T COG2936 75 WFAAQGYAVVNQDVRGRGGSEGV---------------FDPES--------------------S-RE------------- 105 (563)
T ss_pred eeecCceEEEEecccccccCCcc---------------cceec--------------------c-cc-------------
Confidence 57789999999999999999882 11110 0 00
Q ss_pred ccccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 84 VIELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 84 ~~~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
.-|--|.+++|.. ....-.+|-.+|.|++|...+.+|+..|..++.++-..+...
T Consensus 106 --~~Dg~D~I~Wia~--QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~~~D 160 (563)
T COG2936 106 --AEDGYDTIEWLAK--QPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEGLVD 160 (563)
T ss_pred --ccchhHHHHHHHh--CCccCCeeeeecccHHHHHHHHHHhcCCchheeecccccccc
Confidence 0123334444443 223447999999999999999999999888999988877654
No 134
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=97.56 E-value=0.00014 Score=55.86 Aligned_cols=131 Identities=12% Similarity=0.033 Sum_probs=77.7
Q ss_pred ChHHHHHHHHHHHHhcC-CccEEEEEeCcchHHHHHHHHh-CCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhH
Q 023683 88 GSDEVGRVLGQVIDTFN-LAPVHLVLHDSALPMSANWVAE-NPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFG 165 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~-~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (279)
++.++..-+.-+++... .+.+.+-|||.|+.++..+..+ +..+|.++++.++...
T Consensus 117 t~~~~~~gv~filk~~~n~k~l~~gGHSaGAHLa~qav~R~r~prI~gl~l~~GvY~----------------------- 173 (270)
T KOG4627|consen 117 TMTQFTHGVNFILKYTENTKVLTFGGHSAGAHLAAQAVMRQRSPRIWGLILLCGVYD----------------------- 173 (270)
T ss_pred HHHHHHHHHHHHHHhcccceeEEEcccchHHHHHHHHHHHhcCchHHHHHHHhhHhh-----------------------
Confidence 35566666666666654 3557777999999999987654 4456777776654321
Q ss_pred HHHHHHHhhcc--CCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHH
Q 023683 166 YQWLIRFCCMK--KVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGS 243 (279)
Q Consensus 166 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~ 243 (279)
++.+...-... .++.+..+ . .+ -.-|. ..-+++|++++.++++.....+..+
T Consensus 174 l~EL~~te~g~dlgLt~~~ae----~-~S-------------------cdl~~--~~~v~~~ilVv~~~~espklieQnr 227 (270)
T KOG4627|consen 174 LRELSNTESGNDLGLTERNAE----S-VS-------------------CDLWE--YTDVTVWILVVAAEHESPKLIEQNR 227 (270)
T ss_pred HHHHhCCccccccCcccchhh----h-cC-------------------ccHHH--hcCceeeeeEeeecccCcHHHHhhh
Confidence 11100000000 01110000 0 00 00000 2336789999999986666678889
Q ss_pred HHHhhCCCCcEEEe-cCCCCCCCcc
Q 023683 244 RVADALPQAKFVGH-SGGRWPQTSR 267 (279)
Q Consensus 244 ~~~~~~~~~~~~~i-~~gH~~~~e~ 267 (279)
.+++...++++..+ +.+|+-.+++
T Consensus 228 df~~q~~~a~~~~f~n~~hy~I~~~ 252 (270)
T KOG4627|consen 228 DFADQLRKASFTLFKNYDHYDIIEE 252 (270)
T ss_pred hHHHHhhhcceeecCCcchhhHHHH
Confidence 99999888999999 6899865543
No 135
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=97.55 E-value=0.00018 Score=57.41 Aligned_cols=53 Identities=15% Similarity=0.036 Sum_probs=39.6
Q ss_pred hHHHHHHHHHHHHhc-------CCccEEEEEeCcchHHHHHHHHhCC--CccceEEEeeCCC
Q 023683 89 SDEVGRVLGQVIDTF-------NLAPVHLVLHDSALPMSANWVAENP--GSVKSLTLLDTGI 141 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~ 141 (279)
....++++.+-+.++ ++.++.++|||.||-.|..+|..+. -.+.+||-++|..
T Consensus 96 aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GHSrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 96 AASVINWLPEGLQHVLPENVEANLSKLALSGHSRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred HHHHHHHHHhhhhhhCCCCcccccceEEEeecCCccHHHHHHHhcccccCchhheecccccC
Confidence 445555555444442 3578999999999999999998773 2588999999974
No 136
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=97.54 E-value=0.00024 Score=60.57 Aligned_cols=55 Identities=16% Similarity=0.105 Sum_probs=48.5
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCC--CccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENP--GSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~~~~~~ 142 (279)
..+++...+.+++...+.+++.|+||||||.++..++..++ .+|++++.++++-.
T Consensus 109 ~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ry~~~~~~~~~~V~~~~tl~tp~~ 165 (336)
T COG1075 109 RGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDSRYYLGVLGGANRVASVVTLGTPHH 165 (336)
T ss_pred cHHHHHHHHHHHHhhcCCCceEEEeecccchhhHHHHhhcCccceEEEEEEeccCCC
Confidence 46777777888888888899999999999999999999888 89999999999854
No 137
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.54 E-value=0.00011 Score=61.74 Aligned_cols=52 Identities=13% Similarity=-0.101 Sum_probs=38.3
Q ss_pred ccccCCCEEEEeeCCCCcccc-hhHHHHHhhCCCC--cEEEe-cCCCCCCCcchHH
Q 023683 219 EGIKGIPMQILWSSVWSKEWS-EEGSRVADALPQA--KFVGH-SGGRWPQTSRGRA 270 (279)
Q Consensus 219 ~~~~~~Pvlii~G~~d~~~~~-~~~~~~~~~~~~~--~~~~i-~~gH~~~~e~p~~ 270 (279)
..++++|++++.|..|...+. ....+....+++. .+..+ ++.|+-.+|-..+
T Consensus 247 l~~v~~P~~~~a~s~D~~aP~~~~~~~~f~~l~g~~k~~~~vp~a~h~sfl~~~~~ 302 (365)
T COG4188 247 LVKVTDPVLLAAGSADGFAPPVTEQIRPFGYLPGALKYLRLVPGATHFSFLELCKE 302 (365)
T ss_pred ceeeecceeeecccccccCCcccccccccccCCcchhheeecCCCccccccccCcc
Confidence 556899999999997654343 5666777778887 34555 6999988876655
No 138
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=97.51 E-value=0.0003 Score=56.73 Aligned_cols=55 Identities=11% Similarity=0.204 Sum_probs=40.6
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHh----CC-----CccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE----NP-----GSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~----~p-----~~v~~lvl~~~~~~ 142 (279)
+...+++-|..+.+..+.+++++++||||+.+.+..... .+ .++..+||++|-+.
T Consensus 75 s~~~l~~~L~~L~~~~~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid 138 (233)
T PF05990_consen 75 SGPALARFLRDLARAPGIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDID 138 (233)
T ss_pred HHHHHHHHHHHHHhccCCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCC
Confidence 345556666666566678899999999999999987643 22 36789999988665
No 139
>KOG1551 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.51 E-value=0.0025 Score=51.09 Aligned_cols=51 Identities=10% Similarity=-0.003 Sum_probs=38.5
Q ss_pred EEEeeCCCCcccchhHHHHHhhCCCCcEEEecCCCCC-CCcchHHHHHHHhh
Q 023683 227 QILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWP-QTSRGRAHTRAYTE 277 (279)
Q Consensus 227 lii~G~~d~~~~~~~~~~~~~~~~~~~~~~i~~gH~~-~~e~p~~~~~~i~~ 277 (279)
.++.+++|...+......+.+.+|++++..+++||.. ++-+-+++.+.|.+
T Consensus 310 ivv~A~~D~Yipr~gv~~lQ~~WPg~eVr~~egGHVsayl~k~dlfRR~I~d 361 (371)
T KOG1551|consen 310 IVVQAKEDAYIPRTGVRSLQEIWPGCEVRYLEGGHVSAYLFKQDLFRRAIVD 361 (371)
T ss_pred EEEEecCCccccccCcHHHHHhCCCCEEEEeecCceeeeehhchHHHHHHHH
Confidence 4445554444444778889999999999999999984 56677888888765
No 140
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=97.46 E-value=0.00069 Score=53.85 Aligned_cols=54 Identities=9% Similarity=0.069 Sum_probs=43.2
Q ss_pred hHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
...+++.+..+..+.++ .+|.+.|+|.||+++..+++.+|+.+.++...+....
T Consensus 78 ~~~i~~lv~~v~~~~~iD~~RVyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~ 133 (220)
T PF10503_consen 78 VAFIAALVDYVAARYNIDPSRVYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPY 133 (220)
T ss_pred hhhHHHHHHhHhhhcccCCCceeeEEECHHHHHHHHHHHhCCccceEEEeeccccc
Confidence 34455555666666665 4799999999999999999999999999888877654
No 141
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=97.45 E-value=0.007 Score=51.27 Aligned_cols=41 Identities=10% Similarity=-0.012 Sum_probs=33.3
Q ss_pred cCCccEEEEEeCcchHHHHHHHHhC------CCccceEEEeeCCCCC
Q 023683 103 FNLAPVHLVLHDSALPMSANWVAEN------PGSVKSLTLLDTGIKP 143 (279)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~a~~~------p~~v~~lvl~~~~~~~ 143 (279)
.+.++++|+|-|-||.+|..+|.+. +.++++.|++-|....
T Consensus 163 ~D~~rv~l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~~ 209 (336)
T KOG1515|consen 163 ADPSRVFLAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQG 209 (336)
T ss_pred CCcccEEEEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccCC
Confidence 3457899999999999999988642 3579999999998643
No 142
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=97.45 E-value=0.00037 Score=59.11 Aligned_cols=39 Identities=18% Similarity=0.091 Sum_probs=32.3
Q ss_pred CCccEEEEEeCcchHHHHHHHHhCCC--ccceEEEeeCCCC
Q 023683 104 NLAPVHLVLHDSALPMSANWVAENPG--SVKSLTLLDTGIK 142 (279)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 142 (279)
..++++|||||+||.||-.++..... +|.+|+.++|+.+
T Consensus 148 ~~~~ihlIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP 188 (331)
T PF00151_consen 148 PPENIHLIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGP 188 (331)
T ss_dssp -GGGEEEEEETCHHHHHHHHHHHTTT---SSEEEEES-B-T
T ss_pred ChhHEEEEeeccchhhhhhhhhhccCcceeeEEEecCcccc
Confidence 45799999999999999999988877 9999999999864
No 143
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=97.44 E-value=0.0026 Score=55.89 Aligned_cols=56 Identities=14% Similarity=0.070 Sum_probs=45.6
Q ss_pred ccChHHHHHHHHHHHHhcC-----CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 86 ELGSDEVGRVLGQVIDTFN-----LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
+.|+.++......++++.. ..+++|||.+-||+.++.+|+.+|+.+..+|+-++++
T Consensus 115 gQTl~DV~~ae~~Fv~~V~~~hp~~~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 115 GQTLEDVMRAEAAFVEEVAERHPDAPKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred CCcHHHHHHHHHHHHHHHHHhCCCCCCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 3478887777776665532 3489999999999999999999999999999888774
No 144
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=97.42 E-value=0.00037 Score=60.68 Aligned_cols=53 Identities=21% Similarity=0.149 Sum_probs=40.0
Q ss_pred HHHHHHHHHHHhc---CCccEEEEEeCcchHHHHHHHHhCCC------ccceEEEeeCCCCC
Q 023683 91 EVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAENPG------SVKSLTLLDTGIKP 143 (279)
Q Consensus 91 ~~~~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~ 143 (279)
++...+.++++.. .-+|++||||||||.++..+....+. .|+++|.++++...
T Consensus 101 ~~~~~lk~~ie~~~~~~~~kv~li~HSmGgl~~~~fl~~~~~~~W~~~~i~~~i~i~~p~~G 162 (389)
T PF02450_consen 101 EYFTKLKQLIEEAYKKNGKKVVLIAHSMGGLVARYFLQWMPQEEWKDKYIKRFISIGTPFGG 162 (389)
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEeCCCchHHHHHHHhccchhhHHhhhhEEEEeCCCCCC
Confidence 4455555555432 24799999999999999999887743 59999999998543
No 145
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=97.40 E-value=0.0087 Score=50.54 Aligned_cols=38 Identities=3% Similarity=-0.035 Sum_probs=30.4
Q ss_pred CccEEEEEeCcchHHHHHHHHhCCC----ccceEEEeeCCCC
Q 023683 105 LAPVHLVLHDSALPMSANWVAENPG----SVKSLTLLDTGIK 142 (279)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~a~~~p~----~v~~lvl~~~~~~ 142 (279)
.+++.++|+|-||.+++.++..-.+ .....+++.|...
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d 192 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDRGLPLPAAQVLISPLLD 192 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhcCCCCceEEEEEecccC
Confidence 3679999999999999999865433 4688888888754
No 146
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.37 E-value=0.00052 Score=57.13 Aligned_cols=24 Identities=13% Similarity=-0.011 Sum_probs=19.6
Q ss_pred CccEEEEEeCcchHHHHHHHHhCC
Q 023683 105 LAPVHLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~a~~~p 128 (279)
.+.+++.|||+||.++.++..++.
T Consensus 214 a~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 214 AKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred hheEEEeeccccHHHHHHHHHhcc
Confidence 367999999999999988665543
No 147
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=97.37 E-value=0.00059 Score=60.47 Aligned_cols=55 Identities=13% Similarity=0.014 Sum_probs=41.6
Q ss_pred cChHHHHHHHHHHHHhcC-------CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 87 LGSDEVGRVLGQVIDTFN-------LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~-------~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
+|.++..+|+..+++.+. -.|++++|-|+||++|..+-.+||+.|.+.+.-++++
T Consensus 87 Lt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~~~~ga~ASSapv 148 (434)
T PF05577_consen 87 LTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPHLFDGAWASSAPV 148 (434)
T ss_dssp -SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TTT-SEEEEET--C
T ss_pred cCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCCeeEEEEecccee
Confidence 478888888888876543 2489999999999999999999999999999888875
No 148
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=97.31 E-value=0.0057 Score=52.32 Aligned_cols=153 Identities=8% Similarity=-0.065 Sum_probs=85.9
Q ss_pred HHHHHHhc---CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHHHHHHH
Q 023683 96 LGQVIDTF---NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRF 172 (279)
Q Consensus 96 l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (279)
+.+++++. .+++++|.|.|-=|..++..|+ ...||++++-+.-...... ..+...++.
T Consensus 159 vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN~~------------------~~l~h~y~~ 219 (367)
T PF10142_consen 159 VQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLNMK------------------ANLEHQYRS 219 (367)
T ss_pred HHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCCcH------------------HHHHHHHHH
Confidence 34444444 6789999999999999999998 5667888775533221111 122233332
Q ss_pred hhccCCCchhHHhHHHhhcCcchhhhHHHHHhhcccccccccccccccccCCCEEEEeeCCCCcccchhHHHHHhhCCCC
Q 023683 173 CCMKKVGSFDVEDNRVLLKGRDRCRAVSEMGRKLNNSFDMAEWGSSEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQA 252 (279)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~ 252 (279)
..+. .+......+...+...-.......+.+.+... .+ ....++|.++|.|..|....++....+-+.+|+-
T Consensus 220 yG~~-ws~a~~dY~~~gi~~~l~tp~f~~L~~ivDP~----~Y---~~rL~~PK~ii~atgDeFf~pD~~~~y~d~L~G~ 291 (367)
T PF10142_consen 220 YGGN-WSFAFQDYYNEGITQQLDTPEFDKLMQIVDPY----SY---RDRLTMPKYIINATGDEFFVPDSSNFYYDKLPGE 291 (367)
T ss_pred hCCC-CccchhhhhHhCchhhcCCHHHHHHHHhcCHH----HH---HHhcCccEEEEecCCCceeccCchHHHHhhCCCC
Confidence 2211 12111111111111111111122222222211 11 1234799999999998888889999999999987
Q ss_pred cEEEe--cCCCCCCCcchHHHHHHHhhc
Q 023683 253 KFVGH--SGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 253 ~~~~i--~~gH~~~~e~p~~~~~~i~~f 278 (279)
+...+ +++|..-. ..+.+.|..|
T Consensus 292 K~lr~vPN~~H~~~~---~~~~~~l~~f 316 (367)
T PF10142_consen 292 KYLRYVPNAGHSLIG---SDVVQSLRAF 316 (367)
T ss_pred eeEEeCCCCCcccch---HHHHHHHHHH
Confidence 65444 69999876 4444445444
No 149
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.30 E-value=0.0084 Score=47.74 Aligned_cols=190 Identities=9% Similarity=-0.064 Sum_probs=100.7
Q ss_pred ccChHHHHHHHHHHHHhcC--CccEEEEEeCcchHHHHHHHHhC-CC-ccceEEEeeCCCCCcc---hhhhh-----hhh
Q 023683 86 ELGSDEVGRVLGQVIDTFN--LAPVHLVLHDSALPMSANWVAEN-PG-SVKSLTLLDTGIKPAL---PLFAL-----NLP 153 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~-p~-~v~~lvl~~~~~~~~~---~~~~~-----~~~ 153 (279)
-++++++++.=.++++..- ..+++++|||.|+++.+.+.... ++ .|.+.+++-|.+.... ..+.+ ..+
T Consensus 88 ifsL~~QV~HKlaFik~~~Pk~~ki~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LFPTIerM~eSpnG~~~t~~l~~~~ 167 (301)
T KOG3975|consen 88 IFSLQDQVDHKLAFIKEYVPKDRKIYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLFPTIERMHESPNGIRLTKVLRYLP 167 (301)
T ss_pred ccchhhHHHHHHHHHHHhCCCCCEEEEEecchhHHHHHHHhhhcccccceEEEEEecchHHHHhcCCCceEeeeeeeeeh
Confidence 3789999999888888753 36899999999999999988632 22 5788888877641110 00000 000
Q ss_pred HHHH-----hhhcChhHHHHHHHHh--hccCCCchhHHhHHHhhcCcchhhhHHHHH-hhcccccccccccccccccCCC
Q 023683 154 LIRD-----FVLGSSFGYQWLIRFC--CMKKVGSFDVEDNRVLLKGRDRCRAVSEMG-RKLNNSFDMAEWGSSEGIKGIP 225 (279)
Q Consensus 154 ~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~P 225 (279)
.... .+.-.+.++..++-.. .....+++........ ..+.-.+....+. ..+... .....+......+-
T Consensus 168 hv~~lt~yi~~~~lp~~ir~~Li~~~l~~~n~p~e~l~tal~l-~h~~v~rn~v~la~qEm~eV--~~~d~e~~een~d~ 244 (301)
T KOG3975|consen 168 HVVSLTSYIYWILLPGFIRFILIKFMLCGSNGPQEFLSTALFL-THPQVVRNSVGLAAQEMEEV--TTRDIEYCEENLDS 244 (301)
T ss_pred hhhheeeeeeeecChHHHHHHHHHHhcccCCCcHHHHhhHHHh-hcHHHHHHHhhhchHHHHHH--HHhHHHHHHhcCcE
Confidence 0000 0000112222222111 1111222222211111 1111111110000 000000 00111123334577
Q ss_pred EEEEeeCCCCcccchhHHHHHhhCCCCcEEEe--cCCCCCCCcchHHHHHHHhhc
Q 023683 226 MQILWSSVWSKEWSEEGSRVADALPQAKFVGH--SGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 226 vlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i--~~gH~~~~e~p~~~~~~i~~f 278 (279)
+.+.+|.+|.=.+.+....+++.+|..++..- ++-|..-..+.+..+..+.+.
T Consensus 245 l~Fyygt~DgW~p~~~~d~~kdd~~eed~~Ldedki~HAFV~~~~q~ma~~v~d~ 299 (301)
T KOG3975|consen 245 LWFYYGTNDGWVPSHYYDYYKDDVPEEDLKLDEDKIPHAFVVKHAQYMANAVFDM 299 (301)
T ss_pred EEEEccCCCCCcchHHHHHHhhhcchhceeeccccCCcceeecccHHHHHHHHHh
Confidence 89999996444445889999999998887665 489999999888888877653
No 150
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=97.28 E-value=0.0004 Score=56.62 Aligned_cols=54 Identities=9% Similarity=0.069 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHh-cCCc--cEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCC
Q 023683 90 DEVGRVLGQVIDT-FNLA--PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP 143 (279)
Q Consensus 90 ~~~~~~l~~~l~~-l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 143 (279)
+.+.++|...+++ +.+. +..|+|+||||..|+.++.+||+.+.+++.+++....
T Consensus 96 ~~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~~~~ 152 (251)
T PF00756_consen 96 TFLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGALDP 152 (251)
T ss_dssp HHHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEESET
T ss_pred eehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCccccc
Confidence 4455666655554 4432 2689999999999999999999999999999987543
No 151
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.25 E-value=0.00061 Score=50.19 Aligned_cols=38 Identities=11% Similarity=0.156 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHh
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 126 (279)
.+.+.+.+.+++++.+..++++.|||+||.+|..++..
T Consensus 47 ~~~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~ 84 (140)
T PF01764_consen 47 YDQILDALKELVEKYPDYSIVITGHSLGGALASLAAAD 84 (140)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCccchhhccchHHHHHHHHHHh
Confidence 45677777787777776789999999999999998864
No 152
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.25 E-value=0.0065 Score=47.86 Aligned_cols=40 Identities=13% Similarity=0.056 Sum_probs=29.4
Q ss_pred CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcc
Q 023683 104 NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPAL 145 (279)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~ 145 (279)
+.+.++|||+|||=++|..+....| +++-|.+++.+.+..
T Consensus 55 ~y~~i~lvAWSmGVw~A~~~l~~~~--~~~aiAINGT~~Pid 94 (213)
T PF04301_consen 55 GYREIYLVAWSMGVWAANRVLQGIP--FKRAIAINGTPYPID 94 (213)
T ss_pred cCceEEEEEEeHHHHHHHHHhccCC--cceeEEEECCCCCcC
Confidence 4579999999999999888765443 666677777654433
No 153
>PF08386 Abhydrolase_4: TAP-like protein; InterPro: IPR013595 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents a C-terminal domain associated with putative hydrolases and bacterial peptidases that belong to MEROPS peptidase family S33 (clan SC). They are related to a tripeptidyl aminopeptidase from Streptomyces lividans (Q54410 from SWISSPROT). A member of this family (Q6E3K7 from SWISSPROT) is thought to be involved in the C-terminal processing of propionicin F, a bacteriocidin characterised from Propionibacterium freudenreichii []. ; GO: 0008233 peptidase activity
Probab=97.14 E-value=0.0014 Score=45.66 Aligned_cols=57 Identities=16% Similarity=0.134 Sum_probs=47.4
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
..|+|+|.++.|-.++.+.++.+++.+++++++.+ +.||-.+...-.-+.+.+.+||
T Consensus 34 ~~piL~l~~~~Dp~TP~~~a~~~~~~l~~s~lvt~~g~gHg~~~~~s~C~~~~v~~yl 91 (103)
T PF08386_consen 34 APPILVLGGTHDPVTPYEGARAMAARLPGSRLVTVDGAGHGVYAGGSPCVDKAVDDYL 91 (103)
T ss_pred CCCEEEEecCcCCCCcHHHHHHHHHHCCCceEEEEeccCcceecCCChHHHHHHHHHH
Confidence 59999999998888888999999999999999988 6899998644455666666664
No 154
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.11 E-value=0.00044 Score=55.66 Aligned_cols=50 Identities=10% Similarity=0.020 Sum_probs=32.2
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhC-----CCccceEEEeeCC
Q 023683 91 EVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAEN-----PGSVKSLTLLDTG 140 (279)
Q Consensus 91 ~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~-----p~~v~~lvl~~~~ 140 (279)
+....+...+++....++++.|||+||.+|..++... +..+..+++-+|.
T Consensus 113 ~~~~~~~~~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~ 167 (229)
T cd00519 113 QVLPELKSALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPR 167 (229)
T ss_pred HHHHHHHHHHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCC
Confidence 3344444455555567899999999999999988753 2335544444443
No 155
>PRK04940 hypothetical protein; Provisional
Probab=97.11 E-value=0.0016 Score=49.65 Aligned_cols=52 Identities=6% Similarity=-0.139 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHHhc---C-CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCC
Q 023683 89 SDEVGRVLGQVIDTF---N-LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKP 143 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l---~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~ 143 (279)
..+..+.+.+.+..+ + .+++.|||.|+||+.|..+|.++.- ..|+++|+..+
T Consensus 39 P~~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA~~La~~~g~---~aVLiNPAv~P 94 (180)
T PRK04940 39 PKHDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWAERIGFLCGI---RQVIFNPNLFP 94 (180)
T ss_pred HHHHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHHHHHHHHHCC---CEEEECCCCCh
Confidence 333344455554431 1 2579999999999999999999873 67889998764
No 156
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=97.10 E-value=0.0013 Score=57.52 Aligned_cols=53 Identities=6% Similarity=-0.175 Sum_probs=41.2
Q ss_pred hHHHHHHHHHHHHhc-C----CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 89 SDEVGRVLGQVIDTF-N----LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l-~----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
.+.++++|.-++++. . -++.+|+|+||||..|+.++.+||+++.+++.+++..
T Consensus 266 ~~~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 266 WLAVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 344555555555542 2 2468899999999999999999999999999998853
No 157
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=96.91 E-value=0.0026 Score=50.83 Aligned_cols=49 Identities=8% Similarity=0.044 Sum_probs=36.4
Q ss_pred HHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhC----CCccceEEEeeCCC
Q 023683 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAEN----PGSVKSLTLLDTGI 141 (279)
Q Consensus 92 ~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~----p~~v~~lvl~~~~~ 141 (279)
.++-+..+++..+ +++.+.|||.||.+|...++.. .++|.++...+++.
T Consensus 71 A~~yl~~~~~~~~-~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPG 123 (224)
T PF11187_consen 71 ALAYLKKIAKKYP-GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPG 123 (224)
T ss_pred HHHHHHHHHHhCC-CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCC
Confidence 3444455555555 4699999999999999999874 35788888887764
No 158
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=96.85 E-value=0.0016 Score=58.30 Aligned_cols=41 Identities=12% Similarity=0.033 Sum_probs=31.6
Q ss_pred HhcCCccEEEEEeCcchHHHHHHHHhCC---------------CccceEEEeeCCC
Q 023683 101 DTFNLAPVHLVLHDSALPMSANWVAENP---------------GSVKSLTLLDTGI 141 (279)
Q Consensus 101 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p---------------~~v~~lvl~~~~~ 141 (279)
...+-+|++||||||||.+++.+..... ..|+++|.++++.
T Consensus 208 ~~nggkKVVLV~HSMGglv~lyFL~wv~~~~~~gG~gG~~W~dKyI~s~I~Iagp~ 263 (642)
T PLN02517 208 ATNGGKKVVVVPHSMGVLYFLHFMKWVEAPAPMGGGGGPGWCAKHIKAVMNIGGPF 263 (642)
T ss_pred HHcCCCeEEEEEeCCchHHHHHHHHhccccccccCCcchHHHHHHHHHheeccccc
Confidence 3344579999999999999999875321 1489999999874
No 159
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=96.83 E-value=0.0022 Score=51.11 Aligned_cols=37 Identities=5% Similarity=0.108 Sum_probs=25.6
Q ss_pred hHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHH
Q 023683 89 SDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~ 125 (279)
.+.+++.|.+.++.... .++++|||||||.++-.+..
T Consensus 59 g~rL~~eI~~~~~~~~~~~~~IsfIgHSLGGli~r~al~ 97 (217)
T PF05057_consen 59 GERLAEEILEHIKDYESKIRKISFIGHSLGGLIARYALG 97 (217)
T ss_pred HHHHHHHHHHhccccccccccceEEEecccHHHHHHHHH
Confidence 34455555555555444 48999999999999876654
No 160
>PLN02162 triacylglycerol lipase
Probab=96.68 E-value=0.0046 Score=53.96 Aligned_cols=38 Identities=13% Similarity=0.028 Sum_probs=30.4
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHH
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
...++.+.+.+++.+....++++.|||+||.+|..+|.
T Consensus 260 ay~~I~~~L~~lL~k~p~~kliVTGHSLGGALAtLaAa 297 (475)
T PLN02162 260 AYYTIRQMLRDKLARNKNLKYILTGHSLGGALAALFPA 297 (475)
T ss_pred hHHHHHHHHHHHHHhCCCceEEEEecChHHHHHHHHHH
Confidence 34556677777777776678999999999999999765
No 161
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.61 E-value=0.0044 Score=52.09 Aligned_cols=56 Identities=14% Similarity=0.189 Sum_probs=43.8
Q ss_pred cChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHh--------CCCccceEEEeeCCCC
Q 023683 87 LGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE--------NPGSVKSLTLLDTGIK 142 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~--------~p~~v~~lvl~~~~~~ 142 (279)
|+-.++...|..+.+....++++|++||||.+++++...+ -+.+++.+||-+|-+.
T Consensus 172 ~Sr~aLe~~lr~La~~~~~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD 235 (377)
T COG4782 172 YSRPALERLLRYLATDKPVKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDID 235 (377)
T ss_pred hhHHHHHHHHHHHHhCCCCceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCC
Confidence 5667777777777777778999999999999999987653 2446888888877653
No 162
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=96.57 E-value=0.0046 Score=49.33 Aligned_cols=55 Identities=11% Similarity=0.131 Sum_probs=42.6
Q ss_pred ChHHHHHHHHHHHH----hcCCccEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVID----TFNLAPVHLVLHDSALPMSANWVAENPG-----SVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~----~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~ 142 (279)
+..++..++..++. +.++.++.+|||||||.-...|+..+.. .++.+|.+++..+
T Consensus 114 s~~~~s~wlk~~msyL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 114 SGLDQSKWLKKAMSYLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred chhhHHHHHHHHHHHHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 45666777766665 4568999999999999999999886532 3889999887655
No 163
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=96.57 E-value=0.005 Score=48.15 Aligned_cols=58 Identities=14% Similarity=0.149 Sum_probs=43.5
Q ss_pred ccccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEecCCCCCCCcchHHHHHHHhhc
Q 023683 219 EGIKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 219 ~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~f 278 (279)
...+++|.|-|.|+.|...+......+++.++++.+...++||+++-..+ ..+.|.+|
T Consensus 159 ~~~i~~PSLHi~G~~D~iv~~~~s~~L~~~~~~a~vl~HpggH~VP~~~~--~~~~i~~f 216 (230)
T KOG2551|consen 159 KRPLSTPSLHIFGETDTIVPSERSEQLAESFKDATVLEHPGGHIVPNKAK--YKEKIADF 216 (230)
T ss_pred ccCCCCCeeEEecccceeecchHHHHHHHhcCCCeEEecCCCccCCCchH--HHHHHHHH
Confidence 34568999999999766666688899999999995555589999986653 34444443
No 164
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=96.54 E-value=0.011 Score=50.05 Aligned_cols=47 Identities=17% Similarity=0.129 Sum_probs=37.2
Q ss_pred cCCccEEEEEeCcchHHHHHHHHhCCC-----ccceEEEeeCCCCCcchhhh
Q 023683 103 FNLAPVHLVLHDSALPMSANWVAENPG-----SVKSLTLLDTGIKPALPLFA 149 (279)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lvl~~~~~~~~~~~~~ 149 (279)
.+.+|+.|||||+|+.+.......-.+ .|+.+++++++.+.....|.
T Consensus 217 ~G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~W~ 268 (345)
T PF05277_consen 217 QGERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEEWR 268 (345)
T ss_pred CCCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHHHH
Confidence 467899999999999998877654433 38999999998877666664
No 165
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=96.53 E-value=0.0055 Score=49.52 Aligned_cols=52 Identities=12% Similarity=0.098 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHh-c--CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 91 EVGRVLGQVIDT-F--NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 91 ~~~~~l~~~l~~-l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
.+.+.+.-++++ + +-++-.++|||+||.+++.....+|+.+....+++|...
T Consensus 119 fL~~~lkP~Ie~~y~~~~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlW 173 (264)
T COG2819 119 FLTEQLKPFIEARYRTNSERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLW 173 (264)
T ss_pred HHHHhhHHHHhcccccCcccceeeeecchhHHHHHHHhcCcchhceeeeecchhh
Confidence 344444444554 2 335688999999999999999999999999999998753
No 166
>KOG3043 consensus Predicted hydrolase related to dienelactone hydrolase [General function prediction only]
Probab=96.51 E-value=0.022 Score=44.76 Aligned_cols=37 Identities=8% Similarity=0.055 Sum_probs=27.8
Q ss_pred HHhcC-CccEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 023683 100 IDTFN-LAPVHLVLHDSALPMSANWVAENPGSVKSLTLL 137 (279)
Q Consensus 100 l~~l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 137 (279)
++..+ ..++-++|.+|||-++..+....| .+.+.+.+
T Consensus 113 lk~~g~~kkIGv~GfCwGak~vv~~~~~~~-~f~a~v~~ 150 (242)
T KOG3043|consen 113 LKNHGDSKKIGVVGFCWGAKVVVTLSAKDP-EFDAGVSF 150 (242)
T ss_pred HHHcCCcceeeEEEEeecceEEEEeeccch-hheeeeEe
Confidence 34445 568889999999999988888777 46666544
No 167
>PLN00413 triacylglycerol lipase
Probab=96.45 E-value=0.0084 Score=52.50 Aligned_cols=37 Identities=16% Similarity=0.080 Sum_probs=30.8
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHH
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
..++.+.+.++++.....++++.|||+||++|..+|.
T Consensus 267 yy~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~ 303 (479)
T PLN00413 267 YYTILRHLKEIFDQNPTSKFILSGHSLGGALAILFTA 303 (479)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHH
Confidence 3456677788888877778999999999999999885
No 168
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=96.44 E-value=0.0023 Score=55.49 Aligned_cols=52 Identities=10% Similarity=0.020 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCC--------ccceEEEeeCC
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPG--------SVKSLTLLDTG 140 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~ 140 (279)
+..+..-|+...+..|-+|++||+||||+.+.+.+...+++ .|++++-++++
T Consensus 165 l~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~~~~~W~~k~I~sfvnig~p 224 (473)
T KOG2369|consen 165 LSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEAEGPAWCDKYIKSFVNIGAP 224 (473)
T ss_pred HHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccccchhHHHHHHHHHHccCch
Confidence 44455555555555666999999999999999999988887 36777777665
No 169
>PLN02454 triacylglycerol lipase
Probab=96.43 E-value=0.0065 Score=52.51 Aligned_cols=37 Identities=5% Similarity=0.113 Sum_probs=28.1
Q ss_pred HHHHHHHHHHHHhcCCcc--EEEEEeCcchHHHHHHHHh
Q 023683 90 DEVGRVLGQVIDTFNLAP--VHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~~--~~lvGhS~Gg~ia~~~a~~ 126 (279)
+++...|..+++.....+ +++.|||+||.+|+..|..
T Consensus 210 ~qvl~~V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 210 SQLLAKIKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHHHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 455566666776665444 9999999999999999853
No 170
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=96.43 E-value=0.017 Score=47.34 Aligned_cols=54 Identities=7% Similarity=0.142 Sum_probs=47.0
Q ss_pred ChHHHHHHHHHHHHhcCCc--cEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 88 GSDEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
+...+++.+..++.+.+++ +|.+.|.|-||.++..+++.+|+.+.++..++...
T Consensus 124 dVgflr~lva~l~~~~gidp~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 124 DVGFLRALVAKLVNEYGIDPARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred HHHHHHHHHHHHHHhcCcCcceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 3556777777888888887 79999999999999999999999999999988875
No 171
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=96.42 E-value=0.0015 Score=56.65 Aligned_cols=39 Identities=18% Similarity=0.152 Sum_probs=28.0
Q ss_pred cCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 103 FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
++.+++.++|||+||..++..+.+- .+++..|++++...
T Consensus 225 lD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W~~ 263 (379)
T PF03403_consen 225 LDLSRIGLAGHSFGGATALQALRQD-TRFKAGILLDPWMF 263 (379)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES---T
T ss_pred cchhheeeeecCchHHHHHHHHhhc-cCcceEEEeCCccc
Confidence 3456799999999999999887765 67999999999754
No 172
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=96.32 E-value=0.015 Score=44.53 Aligned_cols=52 Identities=13% Similarity=0.062 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHhcC-----CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 90 DEVGRVLGQVIDTFN-----LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~-----~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
+.-+..|..+++.+. ...+.++|||+|+.++-..+...+..+..+|+++++.
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG 144 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPG 144 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCC
Confidence 344555555555443 3468999999999999988877678899999998874
No 173
>PLN02571 triacylglycerol lipase
Probab=96.26 E-value=0.0065 Score=52.55 Aligned_cols=38 Identities=11% Similarity=0.260 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHhcCCc--cEEEEEeCcchHHHHHHHHh
Q 023683 89 SDEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 126 (279)
.+++.++|..+++..... ++++.|||+||.+|...|..
T Consensus 207 r~qvl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 207 RDQVLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 356777888888776543 68999999999999998864
No 174
>PLN02408 phospholipase A1
Probab=96.00 E-value=0.011 Score=50.41 Aligned_cols=37 Identities=5% Similarity=0.162 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHHhcCCc--cEEEEEeCcchHHHHHHHHh
Q 023683 90 DEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 126 (279)
+++.+.|..+++..+.. ++++.|||+||.+|...|..
T Consensus 182 ~qVl~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~d 220 (365)
T PLN02408 182 EMVREEIARLLQSYGDEPLSLTITGHSLGAALATLTAYD 220 (365)
T ss_pred HHHHHHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHH
Confidence 44566677777776643 58999999999999998864
No 175
>COG0627 Predicted esterase [General function prediction only]
Probab=95.99 E-value=0.011 Score=49.78 Aligned_cols=38 Identities=13% Similarity=0.087 Sum_probs=34.6
Q ss_pred cEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCc
Q 023683 107 PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPA 144 (279)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~ 144 (279)
+-.++||||||.=|+.+|++||++++.+...++...+.
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 67899999999999999999999999999998886554
No 176
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=95.96 E-value=0.011 Score=50.47 Aligned_cols=52 Identities=12% Similarity=0.024 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHHhcC--CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 89 SDEVGRVLGQVIDTFN--LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
+.|++..|..+.+.++ ..+|+.+|-|+||+++..+=.+||+.|.+.+.-+++
T Consensus 148 LADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPHiv~GAlAaSAP 201 (492)
T KOG2183|consen 148 LADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPHIVLGALAASAP 201 (492)
T ss_pred HHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChhhhhhhhhccCc
Confidence 3444444444433333 248999999999999999999999998887766665
No 177
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=95.94 E-value=0.0078 Score=55.38 Aligned_cols=34 Identities=24% Similarity=0.183 Sum_probs=26.8
Q ss_pred cEEEEEeCcchHHHHHHHHh---CCCccceEEEeeCC
Q 023683 107 PVHLVLHDSALPMSANWVAE---NPGSVKSLTLLDTG 140 (279)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~a~~---~p~~v~~lvl~~~~ 140 (279)
.|++|||||||.+|...+.. .+..|+-++.++++
T Consensus 183 sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssP 219 (973)
T KOG3724|consen 183 SVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSP 219 (973)
T ss_pred eEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCc
Confidence 49999999999999987742 34567777777776
No 178
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=95.89 E-value=0.08 Score=45.40 Aligned_cols=56 Identities=9% Similarity=0.098 Sum_probs=41.3
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHh--CCC---ccceEEEeeCCCCCc
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE--NPG---SVKSLTLLDTGIKPA 144 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~--~p~---~v~~lvl~~~~~~~~ 144 (279)
+.+.++--..+++..|.+.++|+|-|.||.+++.+... +++ .-+++|+++|.....
T Consensus 178 L~qlv~~Y~~Lv~~~G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~ 238 (374)
T PF10340_consen 178 LRQLVATYDYLVESEGNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLV 238 (374)
T ss_pred HHHHHHHHHHHHhccCCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCc
Confidence 44555555666767788899999999999999987642 212 257999999986543
No 179
>COG4099 Predicted peptidase [General function prediction only]
Probab=95.88 E-value=0.021 Score=46.76 Aligned_cols=53 Identities=9% Similarity=-0.020 Sum_probs=41.8
Q ss_pred HHHHHHHH-HHHHhcCCc--cEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 90 DEVGRVLG-QVIDTFNLA--PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 90 ~~~~~~l~-~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
....+.+. .+.++.+++ ++.++|.|+||+-++.++.++|+.+.+.+++++...
T Consensus 250 ~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 250 IEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred HHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 33444444 344566664 799999999999999999999999999999988643
No 180
>KOG4840 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.79 E-value=0.0083 Score=46.95 Aligned_cols=55 Identities=13% Similarity=0.114 Sum_probs=42.8
Q ss_pred ChHHHHHHHHHHHHhcCC----ccEEEEEeCcchHHHHHHHH--hCCCccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVIDTFNL----APVHLVLHDSALPMSANWVA--ENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~----~~~~lvGhS~Gg~ia~~~a~--~~p~~v~~lvl~~~~~~ 142 (279)
++++-++++..++++++. .+++|+|||-|+.-.++|.. ..|..|...|+.+|...
T Consensus 85 slk~D~edl~~l~~Hi~~~~fSt~vVL~GhSTGcQdi~yYlTnt~~~r~iraaIlqApVSD 145 (299)
T KOG4840|consen 85 SLKDDVEDLKCLLEHIQLCGFSTDVVLVGHSTGCQDIMYYLTNTTKDRKIRAAILQAPVSD 145 (299)
T ss_pred cccccHHHHHHHHHHhhccCcccceEEEecCccchHHHHHHHhccchHHHHHHHHhCccch
Confidence 466678888989987653 38999999999998888873 34667888888877654
No 181
>PLN02934 triacylglycerol lipase
Probab=95.77 E-value=0.016 Score=51.20 Aligned_cols=37 Identities=11% Similarity=0.022 Sum_probs=31.3
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHH
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
..++.+.+.+++++....++++.|||+||.+|..+|.
T Consensus 304 y~~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~ 340 (515)
T PLN02934 304 YYAVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPT 340 (515)
T ss_pred HHHHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHH
Confidence 4557777888888887779999999999999999874
No 182
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=95.74 E-value=0.55 Score=37.94 Aligned_cols=58 Identities=12% Similarity=-0.084 Sum_probs=40.3
Q ss_pred cCCCEEEEeeCCCCcccchhHHHHHhhC--CC--CcEEEe-cCCCCCCC-cchHHHHHHHhhcC
Q 023683 222 KGIPMQILWSSVWSKEWSEEGSRVADAL--PQ--AKFVGH-SGGRWPQT-SRGRAHTRAYTEDV 279 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~~~~~~~~~~~--~~--~~~~~i-~~gH~~~~-e~p~~~~~~i~~fl 279 (279)
..+|-|+++++.|...+.+..++.++.. .+ ++.+.+ ++.|..|+ ++|++-.+++.+|+
T Consensus 177 ~~~p~lylYS~~D~l~~~~~ve~~~~~~~~~G~~V~~~~f~~S~HV~H~r~~p~~Y~~~v~~fw 240 (240)
T PF05705_consen 177 SRCPRLYLYSKADPLIPWRDVEEHAEEARRKGWDVRAEKFEDSPHVAHLRKHPDRYWRAVDEFW 240 (240)
T ss_pred CCCCeEEecCCCCcCcCHHHHHHHHHHHHHcCCeEEEecCCCCchhhhcccCHHHHHHHHHhhC
Confidence 4589999999987555554444444332 22 444555 68999876 57999999999885
No 183
>KOG3253 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=95.70 E-value=0.046 Score=49.06 Aligned_cols=45 Identities=7% Similarity=-0.062 Sum_probs=35.7
Q ss_pred cCCCEEEEeeCCCCcccchhHHHHHhhC-CCCcEEEe-cCCCCCCCc
Q 023683 222 KGIPMQILWSSVWSKEWSEEGSRVADAL-PQAKFVGH-SGGRWPQTS 266 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~~~~~~~~~~~-~~~~~~~i-~~gH~~~~e 266 (279)
.+.|+|+|.|.+|.+.....++.+++++ ...+++++ .++|.+-.-
T Consensus 303 mk~PVLFV~Gsnd~mcspn~ME~vreKMqA~~elhVI~~adhsmaip 349 (784)
T KOG3253|consen 303 MKQPVLFVIGSNDHMCSPNSMEEVREKMQAEVELHVIGGADHSMAIP 349 (784)
T ss_pred cCCceEEEecCCcccCCHHHHHHHHHHhhccceEEEecCCCccccCC
Confidence 4699999999998888888888888776 34567888 589987643
No 184
>PLN02310 triacylglycerol lipase
Probab=95.67 E-value=0.03 Score=48.44 Aligned_cols=36 Identities=6% Similarity=0.075 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHhcC----CccEEEEEeCcchHHHHHHHH
Q 023683 90 DEVGRVLGQVIDTFN----LAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
+++.+.|..+++.+. .-++++.|||+||.+|+..|.
T Consensus 189 ~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~ 228 (405)
T PLN02310 189 EQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAY 228 (405)
T ss_pred HHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHH
Confidence 456666677776553 237999999999999999885
No 185
>KOG3101 consensus Esterase D [General function prediction only]
Probab=95.59 E-value=0.0013 Score=50.91 Aligned_cols=57 Identities=18% Similarity=0.156 Sum_probs=43.0
Q ss_pred HHHHHHHHHHh----cCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhh
Q 023683 92 VGRVLGQVIDT----FNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLF 148 (279)
Q Consensus 92 ~~~~l~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~ 148 (279)
+++.+-+++.. ++..++-+.||||||.=|+-.+.+.|.+.+++-..+|..++..-.|
T Consensus 123 v~kELp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI~NP~~cpW 183 (283)
T KOG3101|consen 123 VVKELPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPICNPINCPW 183 (283)
T ss_pred HHHHHHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccccCcccCcc
Confidence 34445555542 3335788999999999999999999999999999888876655444
No 186
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=95.57 E-value=0.02 Score=44.20 Aligned_cols=54 Identities=6% Similarity=0.044 Sum_probs=40.5
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHh--C----CCccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE--N----PGSVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~--~----p~~v~~lvl~~~~~~ 142 (279)
..++.+.|.+......-.+++|+|+|.|+.++..++.. . .++|.++++++-+..
T Consensus 64 ~~~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~ 123 (179)
T PF01083_consen 64 VANLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRR 123 (179)
T ss_dssp HHHHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCcc
Confidence 45556666666666666799999999999999999877 2 347889998877644
No 187
>PLN02324 triacylglycerol lipase
Probab=95.56 E-value=0.02 Score=49.58 Aligned_cols=37 Identities=16% Similarity=0.231 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHhcCCc--cEEEEEeCcchHHHHHHHHh
Q 023683 90 DEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 126 (279)
+++.+.|..+++..... ++++.|||+||.+|+..|..
T Consensus 197 eqVl~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 197 EQVQGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 44556677777776543 69999999999999998853
No 188
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=95.55 E-value=0.023 Score=48.45 Aligned_cols=41 Identities=12% Similarity=0.092 Sum_probs=28.0
Q ss_pred hHHHHHHHHHHH----HhcCCccEEEEEeCcchHHHHHHHHhCCC
Q 023683 89 SDEVGRVLGQVI----DTFNLAPVHLVLHDSALPMSANWVAENPG 129 (279)
Q Consensus 89 ~~~~~~~l~~~l----~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 129 (279)
.++.++|+..++ ++++..++.|+|+|+|+=+.-..-.+.|.
T Consensus 305 Pe~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvlP~~~n~L~~ 349 (456)
T COG3946 305 PEQIAADLSRLIRFYARRWGAKRVLLIGYSFGADVLPFAYNRLPP 349 (456)
T ss_pred HHHHHHHHHHHHHHHHHhhCcceEEEEeecccchhhHHHHHhCCH
Confidence 344555555544 55778899999999999886655545444
No 189
>PLN02802 triacylglycerol lipase
Probab=95.28 E-value=0.027 Score=49.80 Aligned_cols=37 Identities=8% Similarity=0.147 Sum_probs=28.4
Q ss_pred HHHHHHHHHHHHhcCCc--cEEEEEeCcchHHHHHHHHh
Q 023683 90 DEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~ 126 (279)
+++.+.|..+++....+ ++++.|||+||.+|...|..
T Consensus 312 eqVl~eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~d 350 (509)
T PLN02802 312 ESVVGEVRRLMEKYKGEELSITVTGHSLGAALALLVADE 350 (509)
T ss_pred HHHHHHHHHHHHhCCCCcceEEEeccchHHHHHHHHHHH
Confidence 45666677777766532 68999999999999988864
No 190
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=95.27 E-value=0.041 Score=43.10 Aligned_cols=40 Identities=15% Similarity=0.169 Sum_probs=33.1
Q ss_pred ChHHHHHHHHHHHHhcCC-ccEEEEEeCcchHHHHHHHHhC
Q 023683 88 GSDEVGRVLGQVIDTFNL-APVHLVLHDSALPMSANWVAEN 127 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~-~~~~lvGhS~Gg~ia~~~a~~~ 127 (279)
-..|+.+....+|++.+- ++++|+|||-|+.+...+..++
T Consensus 76 ay~DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~ 116 (207)
T PF11288_consen 76 AYSDVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEE 116 (207)
T ss_pred hHHHHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHH
Confidence 467777777888888754 6999999999999999998764
No 191
>PLN02753 triacylglycerol lipase
Probab=95.20 E-value=0.028 Score=49.88 Aligned_cols=37 Identities=3% Similarity=0.018 Sum_probs=28.7
Q ss_pred hHHHHHHHHHHHHhcCC-----ccEEEEEeCcchHHHHHHHH
Q 023683 89 SDEVGRVLGQVIDTFNL-----APVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~ 125 (279)
.+++.+.|..+++..+. -++++.|||+||.+|+..|.
T Consensus 290 reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~ 331 (531)
T PLN02753 290 REQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAY 331 (531)
T ss_pred HHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHH
Confidence 34556667777776643 47999999999999999885
No 192
>COG3150 Predicted esterase [General function prediction only]
Probab=95.10 E-value=0.061 Score=40.30 Aligned_cols=52 Identities=4% Similarity=0.010 Sum_probs=43.2
Q ss_pred ChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
+..+.++.+..++..++.+...+||-|+||..|..++.++. +++ |+++|+..
T Consensus 41 ~p~~a~~ele~~i~~~~~~~p~ivGssLGGY~At~l~~~~G--ira-v~~NPav~ 92 (191)
T COG3150 41 DPQQALKELEKAVQELGDESPLIVGSSLGGYYATWLGFLCG--IRA-VVFNPAVR 92 (191)
T ss_pred CHHHHHHHHHHHHHHcCCCCceEEeecchHHHHHHHHHHhC--Chh-hhcCCCcC
Confidence 68888999999999999888999999999999999998875 444 44666654
No 193
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=95.09 E-value=0.099 Score=42.00 Aligned_cols=35 Identities=14% Similarity=-0.111 Sum_probs=28.2
Q ss_pred cEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 107 PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
|+.-||||+|+-+-+.+...++..-++.|+++-..
T Consensus 91 P~~~vGHSlGcklhlLi~s~~~~~r~gniliSFNN 125 (250)
T PF07082_consen 91 PVYGVGHSLGCKLHLLIGSLFDVERAGNILISFNN 125 (250)
T ss_pred CeeeeecccchHHHHHHhhhccCcccceEEEecCC
Confidence 67899999999999988887766557778776643
No 194
>PLN02719 triacylglycerol lipase
Probab=95.08 E-value=0.032 Score=49.39 Aligned_cols=37 Identities=5% Similarity=0.074 Sum_probs=28.2
Q ss_pred hHHHHHHHHHHHHhcCC-----ccEEEEEeCcchHHHHHHHH
Q 023683 89 SDEVGRVLGQVIDTFNL-----APVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~-----~~~~lvGhS~Gg~ia~~~a~ 125 (279)
-+++.+.|..+++.... -++++.|||+||.+|...|.
T Consensus 276 ReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~ 317 (518)
T PLN02719 276 REQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAY 317 (518)
T ss_pred HHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHH
Confidence 34566667777776642 37999999999999999885
No 195
>PLN02847 triacylglycerol lipase
Probab=95.06 E-value=0.027 Score=50.70 Aligned_cols=31 Identities=16% Similarity=0.052 Sum_probs=23.2
Q ss_pred HHHHHHhcCCccEEEEEeCcchHHHHHHHHh
Q 023683 96 LGQVIDTFNLAPVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 96 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~ 126 (279)
|...+.....-+++++|||+||.+|..++..
T Consensus 241 L~kal~~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 241 LLKALDEYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HHHHHHHCCCCeEEEeccChHHHHHHHHHHH
Confidence 3344444554589999999999999998764
No 196
>PLN03037 lipase class 3 family protein; Provisional
Probab=94.83 E-value=0.04 Score=48.90 Aligned_cols=36 Identities=8% Similarity=0.096 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHhcC----CccEEEEEeCcchHHHHHHHH
Q 023683 90 DEVGRVLGQVIDTFN----LAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~----~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
+++.+.|..+++.+. .-++++.|||+||.+|+..|.
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~ 337 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAY 337 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHH
Confidence 455677777776654 136999999999999999885
No 197
>PLN02761 lipase class 3 family protein
Probab=94.73 E-value=0.046 Score=48.59 Aligned_cols=36 Identities=6% Similarity=0.099 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHhcC------CccEEEEEeCcchHHHHHHHH
Q 023683 90 DEVGRVLGQVIDTFN------LAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~------~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
+++.+.|..+++..+ .-++++.|||+||.+|...|.
T Consensus 272 ~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~ 313 (527)
T PLN02761 272 EQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAY 313 (527)
T ss_pred HHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHH
Confidence 456666777777662 136999999999999998884
No 198
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=94.71 E-value=0.15 Score=43.09 Aligned_cols=46 Identities=17% Similarity=0.206 Sum_probs=37.3
Q ss_pred HHHHhcCCccEEEEEeCcchHHHHHHHHhCCC-ccceEEEeeCCCCC
Q 023683 98 QVIDTFNLAPVHLVLHDSALPMSANWVAENPG-SVKSLTLLDTGIKP 143 (279)
Q Consensus 98 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~~ 143 (279)
+++...+..+++||||+.|+..++.+....+. .++++|++++..+.
T Consensus 185 ~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~ 231 (310)
T PF12048_consen 185 AFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQ 231 (310)
T ss_pred HHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCc
Confidence 34455666679999999999999999887764 58999999997653
No 199
>PLN02633 palmitoyl protein thioesterase family protein
Probab=94.68 E-value=0.099 Score=43.46 Aligned_cols=52 Identities=8% Similarity=0.040 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHHh---cCCccEEEEEeCcchHHHHHHHHhCCC--ccceEEEeeCCC
Q 023683 89 SDEVGRVLGQVIDT---FNLAPVHLVLHDSALPMSANWVAENPG--SVKSLTLLDTGI 141 (279)
Q Consensus 89 ~~~~~~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~ 141 (279)
+.++++.+.+.+.. +. +-+++||+|-||.++..++.+.|+ .|+.+|.+++.-
T Consensus 75 ~~~Qve~vce~l~~~~~l~-~G~naIGfSQGGlflRa~ierc~~~p~V~nlISlggph 131 (314)
T PLN02633 75 LTQQAEIACEKVKQMKELS-QGYNIVGRSQGNLVARGLIEFCDGGPPVYNYISLAGPH 131 (314)
T ss_pred HHHHHHHHHHHHhhchhhh-CcEEEEEEccchHHHHHHHHHCCCCCCcceEEEecCCC
Confidence 44555555544433 33 469999999999999999999987 599999999884
No 200
>KOG3847 consensus Phospholipase A2 (platelet-activating factor acetylhydrolase in humans) [Lipid transport and metabolism]
Probab=94.57 E-value=0.021 Score=47.09 Aligned_cols=37 Identities=11% Similarity=0.028 Sum_probs=29.7
Q ss_pred CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 105 LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
-.++.++|||+||+.++...+.+.+ ++.-|+++....
T Consensus 240 ~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~WM~ 276 (399)
T KOG3847|consen 240 TSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDAWMF 276 (399)
T ss_pred hhhhhheeccccchhhhhhhccccc-eeeeeeeeeeec
Confidence 3568899999999999988877665 777788887743
No 201
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=94.40 E-value=0.58 Score=42.81 Aligned_cols=56 Identities=2% Similarity=-0.075 Sum_probs=47.0
Q ss_pred cChHHHHHHHHHHHHh-cC-CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 87 LGSDEVGRVLGQVIDT-FN-LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~-l~-~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
-|+.|+.+....+++. .+ -+.++++|-|.||++....+.+.|+.++++|+--|.+.
T Consensus 506 NTf~DFIa~a~~Lv~~g~~~~~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~VPFVD 563 (682)
T COG1770 506 NTFTDFIAAARHLVKEGYTSPDRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQVPFVD 563 (682)
T ss_pred ccHHHHHHHHHHHHHcCcCCccceEEeccCchhHHHHHHHhhChhhhhheeecCCccc
Confidence 3789999988888765 22 25799999999999999999999999999998877654
No 202
>PLN02606 palmitoyl-protein thioesterase
Probab=94.24 E-value=0.13 Score=42.70 Aligned_cols=53 Identities=8% Similarity=0.024 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHh---cCCccEEEEEeCcchHHHHHHHHhCCC--ccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDT---FNLAPVHLVLHDSALPMSANWVAENPG--SVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~~~ 142 (279)
+.++++.+.+.+.. +. +-+++||+|-||.++..++.+.|+ .|+.+|.+++.-.
T Consensus 76 ~~~Qv~~vce~l~~~~~L~-~G~naIGfSQGglflRa~ierc~~~p~V~nlISlggph~ 133 (306)
T PLN02606 76 LRQQASIACEKIKQMKELS-EGYNIVAESQGNLVARGLIEFCDNAPPVINYVSLGGPHA 133 (306)
T ss_pred HHHHHHHHHHHHhcchhhc-CceEEEEEcchhHHHHHHHHHCCCCCCcceEEEecCCcC
Confidence 44455555444433 33 469999999999999999999987 4999999998843
No 203
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=93.95 E-value=0.17 Score=44.54 Aligned_cols=55 Identities=15% Similarity=0.016 Sum_probs=46.9
Q ss_pred cChHHHHHHHHHHHHhcCC-------ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 87 LGSDEVGRVLGQVIDTFNL-------APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~~-------~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
.+..+...|+..++++++. .|.+.+|-|+-|.++..+=.++|+.+.+-|.-++++
T Consensus 146 LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~~GsvASSapv 207 (514)
T KOG2182|consen 146 LSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELTVGSVASSAPV 207 (514)
T ss_pred hhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhheeecccccce
Confidence 4688888899988887653 289999999999999999999999999988877774
No 204
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=93.91 E-value=0.29 Score=41.51 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHhc---CCccEEEEEeCcchHHHHHHHHh----C------CCccceEEEeeCCCCC
Q 023683 90 DEVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAE----N------PGSVKSLTLLDTGIKP 143 (279)
Q Consensus 90 ~~~~~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl~~~~~~~ 143 (279)
+++..-|..+++.. .-.+++|.|-|+||..+-.+|.. . +-.++|+++-++...+
T Consensus 32 ~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~~~inLkGi~IGNg~t~~ 98 (319)
T PLN02213 32 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 98 (319)
T ss_pred HHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccCCceeeeEEEeCCCCCCc
Confidence 44455555555443 34789999999999977777653 1 1247898888887543
No 205
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=93.82 E-value=0.052 Score=44.71 Aligned_cols=36 Identities=8% Similarity=-0.174 Sum_probs=31.9
Q ss_pred cEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 107 PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
.-+|.|-|+||.+++..+..||+++-.++..++...
T Consensus 178 ~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~ 213 (299)
T COG2382 178 GRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFW 213 (299)
T ss_pred CcEEeccccccHHHHHHHhcCchhhceeeccCCccc
Confidence 456999999999999999999999999998877643
No 206
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=93.58 E-value=0.11 Score=44.41 Aligned_cols=36 Identities=8% Similarity=0.076 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHH
Q 023683 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
..+.+++..++....--++.+-|||+||.+|...|.
T Consensus 155 ~~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~ 190 (336)
T KOG4569|consen 155 SGLDAELRRLIELYPNYSIWVTGHSLGGALASLAAL 190 (336)
T ss_pred HHHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHH
Confidence 577788888888888778999999999999998885
No 207
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=93.35 E-value=0.21 Score=43.10 Aligned_cols=36 Identities=6% Similarity=-0.154 Sum_probs=32.0
Q ss_pred cEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 107 PVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
|++++|+|.||.+|...|.-.|..+.+++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 899999999999999999999999999886666554
No 208
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.87 E-value=0.22 Score=38.96 Aligned_cols=42 Identities=21% Similarity=0.300 Sum_probs=34.8
Q ss_pred HHHhcCCccEEEEEeCcchHHHHHHHHhCCC--ccceEEEeeCC
Q 023683 99 VIDTFNLAPVHLVLHDSALPMSANWVAENPG--SVKSLTLLDTG 140 (279)
Q Consensus 99 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~--~v~~lvl~~~~ 140 (279)
++.......+.+|+||+||...+.+..++|+ +|.++++.+++
T Consensus 183 ~v~pa~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 183 IVLPAKAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred HhcccCcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 3444556789999999999999999999985 68888888876
No 209
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=92.45 E-value=0.22 Score=44.48 Aligned_cols=29 Identities=10% Similarity=0.044 Sum_probs=24.8
Q ss_pred CCcEEEe-cCCCCCCCcchHHHHHHHhhcC
Q 023683 251 QAKFVGH-SGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 251 ~~~~~~i-~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+.+++.+ ++||+++.++|+.+.+.|..|+
T Consensus 427 ~l~~~~V~~AGH~vp~d~P~~~~~~i~~fl 456 (462)
T PTZ00472 427 GFSFVQVYNAGHMVPMDQPAVALTMINRFL 456 (462)
T ss_pred CeEEEEECCCCccChhhHHHHHHHHHHHHH
Confidence 4556667 7999999999999999999885
No 210
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=92.42 E-value=0.48 Score=39.00 Aligned_cols=53 Identities=8% Similarity=0.016 Sum_probs=37.4
Q ss_pred hHHHHHHHHHHHHh---cCCccEEEEEeCcchHHHHHHHHhCCC-ccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDT---FNLAPVHLVLHDSALPMSANWVAENPG-SVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~---l~~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~~ 142 (279)
+.++++.+.+.+.. +. +-+++||+|-||.++..++.+.|+ .|+.+|.+++.-.
T Consensus 61 v~~Qv~~vc~~l~~~p~L~-~G~~~IGfSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 61 VNDQVEQVCEQLANDPELA-NGFNAIGFSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp HHHHHHHHHHHHHH-GGGT-T-EEEEEETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred HHHHHHHHHHHHhhChhhh-cceeeeeeccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 45555556555554 33 579999999999999999999875 6999999998843
No 211
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=91.83 E-value=0.45 Score=38.96 Aligned_cols=50 Identities=14% Similarity=0.093 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
..+..+.+..+.+......+.|-|||+||.+|..+..++. +-.+.+-+|+
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T KOG4540|consen 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 3445555566666677778999999999999999987764 3445555554
No 212
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.83 E-value=0.45 Score=38.96 Aligned_cols=50 Identities=14% Similarity=0.093 Sum_probs=35.9
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
..+..+.+..+.+......+.|-|||+||.+|..+..++. +-.+.+-+|+
T Consensus 259 ySa~ldI~~~v~~~Ypda~iwlTGHSLGGa~AsLlG~~fg--lP~VaFesPG 308 (425)
T COG5153 259 YSAALDILGAVRRIYPDARIWLTGHSLGGAIASLLGIRFG--LPVVAFESPG 308 (425)
T ss_pred hHHHHHHHHHHHHhCCCceEEEeccccchHHHHHhccccC--CceEEecCch
Confidence 3445555566666677778999999999999999987764 3445555554
No 213
>KOG2029 consensus Uncharacterized conserved protein [Function unknown]
Probab=91.61 E-value=0.56 Score=42.35 Aligned_cols=38 Identities=11% Similarity=0.247 Sum_probs=27.5
Q ss_pred CccEEEEEeCcchHHHHHHHHh-----CCC------ccceEEEeeCCCC
Q 023683 105 LAPVHLVLHDSALPMSANWVAE-----NPG------SVKSLTLLDTGIK 142 (279)
Q Consensus 105 ~~~~~lvGhS~Gg~ia~~~a~~-----~p~------~v~~lvl~~~~~~ 142 (279)
.++++.|||||||.++-.+... .|+ ...++|+++.+-.
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHr 573 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHR 573 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCC
Confidence 3689999999999887765532 343 3578888887743
No 214
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=91.06 E-value=0.19 Score=45.37 Aligned_cols=55 Identities=7% Similarity=-0.043 Sum_probs=41.0
Q ss_pred ChHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHh--CCCccceEEEeeCCCC
Q 023683 88 GSDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAE--NPGSVKSLTLLDTGIK 142 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 142 (279)
|.....+++.+-+..+|. ++|.|+|+|.||..+..++.. .+..++++|++++...
T Consensus 156 D~~~al~wv~~~i~~fggd~~~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 156 DQRLALKWVQDNIAAFGGDPDSVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred HHHHHHHHHHHHHHHhCCCcceEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 455556666666777765 579999999999998887764 3456899998887643
No 215
>KOG2385 consensus Uncharacterized conserved protein [Function unknown]
Probab=90.66 E-value=0.87 Score=40.46 Aligned_cols=59 Identities=15% Similarity=0.245 Sum_probs=42.1
Q ss_pred HHHHHHHHH--HhcCCccEEEEEeCcchHHHHHHHH---h--CCCccceEEEeeCCCCCcchhhhh
Q 023683 92 VGRVLGQVI--DTFNLAPVHLVLHDSALPMSANWVA---E--NPGSVKSLTLLDTGIKPALPLFAL 150 (279)
Q Consensus 92 ~~~~l~~~l--~~l~~~~~~lvGhS~Gg~ia~~~a~---~--~p~~v~~lvl~~~~~~~~~~~~~~ 150 (279)
..+.+.+.+ ..+|.+|+.|||.|+|+.+..+... + .-+.|..+++++++.+.....|..
T Consensus 431 aG~lLAe~L~~r~qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~k 496 (633)
T KOG2385|consen 431 AGELLAEALCKRSQGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWLK 496 (633)
T ss_pred HHHHHHHHHHHhccCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHHH
Confidence 334444443 3467899999999999999886543 2 234689999999998877766643
No 216
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=89.84 E-value=1.4 Score=35.27 Aligned_cols=56 Identities=16% Similarity=0.113 Sum_probs=35.9
Q ss_pred ChHHHHHHHHHHHHh-c-CCccEEEEEeCcchHHHHHHHHhCCC------ccceEEEeeCCCCC
Q 023683 88 GSDEVGRVLGQVIDT-F-NLAPVHLVLHDSALPMSANWVAENPG------SVKSLTLLDTGIKP 143 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~-l-~~~~~~lvGhS~Gg~ia~~~a~~~p~------~v~~lvl~~~~~~~ 143 (279)
+..+=++.+.+.++. . .-++++++|+|.|+.++...+.+.-+ ..-++|+++-+.++
T Consensus 28 Sv~~G~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~rp 91 (225)
T PF08237_consen 28 SVAEGVANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPRRP 91 (225)
T ss_pred HHHHHHHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCCCC
Confidence 344555555555554 1 34789999999999999988765311 23456776665443
No 217
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=89.28 E-value=1.3 Score=39.34 Aligned_cols=54 Identities=15% Similarity=0.081 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHhc---CCccEEEEEeCcchHHHHHHHHh----C------CCccceEEEeeCCCCC
Q 023683 90 DEVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAE----N------PGSVKSLTLLDTGIKP 143 (279)
Q Consensus 90 ~~~~~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl~~~~~~~ 143 (279)
+++.+-+..++... .-.+++|+|.|+||..+-.+|.. . +-.++++++-++...+
T Consensus 146 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~ 212 (433)
T PLN03016 146 KRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYM 212 (433)
T ss_pred HHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhcccccCCcccceeeEecCCCcCc
Confidence 34555555555443 23689999999999877766642 1 1257899998886533
No 218
>COG4287 PqaA PhoPQ-activated pathogenicity-related protein [General function prediction only]
Probab=88.98 E-value=3.6 Score=35.23 Aligned_cols=141 Identities=9% Similarity=-0.086 Sum_probs=75.1
Q ss_pred HHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCCCcchhhhhhhhHHHHhhhcChhHHHHHHHHhhcc
Q 023683 97 GQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIKPALPLFALNLPLIRDFVLGSSFGYQWLIRFCCMK 176 (279)
Q Consensus 97 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (279)
...+.++.++.+++-|-|--|+.++.-|...| +|.++|-... .. ...+..+...++...++
T Consensus 225 q~eL~q~~Ik~F~VTGaSKRgWttwLTAIaDp-rv~aIvp~v~-----------------D~-Lni~a~L~hiyrsYGgn 285 (507)
T COG4287 225 QDELEQVEIKGFMVTGASKRGWTTWLTAIADP-RVFAIVPFVY-----------------DN-LNIEAQLLHIYRSYGGN 285 (507)
T ss_pred HhhhhheeeeeEEEeccccchHHHHHHHhcCc-chhhhhhhHH-----------------hh-cccHHHHHHHHHhhCCC
Confidence 34556677889999999999999988887666 4666552211 10 11112222333222211
Q ss_pred CCCchhHHhHHHhhc---CcchhhhHHHHHhhcccccccccccc--cccccCCCEEEEeeCCCCcccchhHHHHHhhCCC
Q 023683 177 KVGSFDVEDNRVLLK---GRDRCRAVSEMGRKLNNSFDMAEWGS--SEGIKGIPMQILWSSVWSKEWSEEGSRVADALPQ 251 (279)
Q Consensus 177 ~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~ 251 (279)
.+......|.+... ....++...+.. .. ..++. ......+|..+|.+..|....++.+....+.+|+
T Consensus 286 -wpi~l~pyyaegi~erl~tp~fkqL~~Ii---DP----lay~~try~~RLalpKyivnaSgDdff~pDsa~lYyd~LPG 357 (507)
T COG4287 286 -WPIKLAPYYAEGIDERLETPLFKQLLEII---DP----LAYRNTRYQLRLALPKYIVNASGDDFFVPDSANLYYDDLPG 357 (507)
T ss_pred -CCcccchhHhhhHHHhhcCHHHHHHHHhh---cH----HHHhhhhhhhhccccceeecccCCcccCCCccceeeccCCC
Confidence 12111122222111 111111122111 10 00010 1223579999999998766677888888999999
Q ss_pred CcEEEe--cCCCCCC
Q 023683 252 AKFVGH--SGGRWPQ 264 (279)
Q Consensus 252 ~~~~~i--~~gH~~~ 264 (279)
.+...+ +..|..-
T Consensus 358 ~kaLrmvPN~~H~~~ 372 (507)
T COG4287 358 EKALRMVPNDPHNLI 372 (507)
T ss_pred ceeeeeCCCCcchhh
Confidence 886555 5788754
No 219
>PLN02209 serine carboxypeptidase
Probab=88.91 E-value=1.5 Score=39.04 Aligned_cols=56 Identities=11% Similarity=0.019 Sum_probs=39.0
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhC------------------------CC-CcEEEe-cCCCCCCCcchHHHHHHHh
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADAL------------------------PQ-AKFVGH-SGGRWPQTSRGRAHTRAYT 276 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~------------------------~~-~~~~~i-~~gH~~~~e~p~~~~~~i~ 276 (279)
.++||+..|+.|.....-..+.+.+.+ .+ .+++.+ ++||+++ .+|++.-..+.
T Consensus 351 girVLiY~GD~D~icn~~Gte~wi~~L~w~~~~~~~~w~~~~q~aG~vk~y~n~Ltfv~V~~AGHmVp-~qP~~al~m~~ 429 (437)
T PLN02209 351 GYRSLIFSGDHDITMPFQATQAWIKSLNYSIIDDWRPWMIKGQIAGYTRTYSNKMTFATVKGGGHTAE-YLPEESSIMFQ 429 (437)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhcCCccCCCeeeeEECCEeeeEEEEeCCceEEEEEcCCCCCcC-cCHHHHHHHHH
Confidence 589999999976544442222322221 33 566777 8999996 59999999998
Q ss_pred hcC
Q 023683 277 EDV 279 (279)
Q Consensus 277 ~fl 279 (279)
+|+
T Consensus 430 ~fi 432 (437)
T PLN02209 430 RWI 432 (437)
T ss_pred HHH
Confidence 885
No 220
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=88.30 E-value=0.45 Score=35.96 Aligned_cols=36 Identities=14% Similarity=0.050 Sum_probs=32.3
Q ss_pred ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
.+.++-|.||||..|..+.-+||+.+.++|.+++..
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 457788999999999999999999999999998764
No 221
>KOG2112 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=88.25 E-value=1.9 Score=33.76 Aligned_cols=53 Identities=9% Similarity=0.052 Sum_probs=39.7
Q ss_pred ChHHHHHHHHHHHHh---cC--CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 88 GSDEVGRVLGQVIDT---FN--LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~---l~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
.....++.+..+++. .+ ..++.+-|.||||+++++.+..+|..+.++.-..+.
T Consensus 70 ~~~~aa~~i~~Li~~e~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~ 127 (206)
T KOG2112|consen 70 GLHRAADNIANLIDNEPANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGF 127 (206)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccc
Confidence 355566666666665 33 356889999999999999999998877777765543
No 222
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=87.36 E-value=1.5 Score=39.02 Aligned_cols=53 Identities=9% Similarity=-0.028 Sum_probs=35.7
Q ss_pred ChHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHhCCC---ccceEEEeeCC
Q 023683 88 GSDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTG 140 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 140 (279)
|+..+.+.+.+.+.++.- .+.+|+|-|+||.-+-.+|..--+ ..++++++.+.
T Consensus 178 D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssv 235 (498)
T COG2939 178 DVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSV 235 (498)
T ss_pred hHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeee
Confidence 455555555555555443 489999999999988888864333 35677777665
No 223
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=86.40 E-value=2 Score=36.47 Aligned_cols=56 Identities=13% Similarity=-0.006 Sum_probs=37.4
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhC------------------------CC-CcEEEe-cCCCCCCCcchHHHHHHHh
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADAL------------------------PQ-AKFVGH-SGGRWPQTSRGRAHTRAYT 276 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~------------------------~~-~~~~~i-~~gH~~~~e~p~~~~~~i~ 276 (279)
.++||+-.|+.|.....-..+.+.+.+ .+ .++.++ ++||+++ .+|+..-+.+.
T Consensus 233 ~i~VliY~Gd~D~icn~~g~~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~~~ltf~~V~~AGHmV~-~qP~~al~m~~ 311 (319)
T PLN02213 233 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 311 (319)
T ss_pred CceEEEEECCcCeeCCcHhHHHHHHhcCCCCCCCCccccCCCEeeeEEEEecCcceEEEEcCCCCCCC-cCHHHHHHHHH
Confidence 589999999976433331122221111 22 566777 7999997 59999999998
Q ss_pred hcC
Q 023683 277 EDV 279 (279)
Q Consensus 277 ~fl 279 (279)
+||
T Consensus 312 ~fi 314 (319)
T PLN02213 312 RWI 314 (319)
T ss_pred HHH
Confidence 885
No 224
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=86.00 E-value=3.1 Score=34.00 Aligned_cols=53 Identities=11% Similarity=-0.058 Sum_probs=38.9
Q ss_pred hHHHHHHHHHHHHhcC--CccEEEEEeCcchHHHHHHHHhCCC-ccceEEEeeCCC
Q 023683 89 SDEVGRVLGQVIDTFN--LAPVHLVLHDSALPMSANWVAENPG-SVKSLTLLDTGI 141 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~--~~~~~lvGhS~Gg~ia~~~a~~~p~-~v~~lvl~~~~~ 141 (279)
+.++++.+.+.+.... -.-+++||.|-||.++..++...++ .|+.+|.++++-
T Consensus 73 l~~Qv~~~ce~v~~m~~lsqGynivg~SQGglv~Raliq~cd~ppV~n~ISL~gPh 128 (296)
T KOG2541|consen 73 LWEQVDVACEKVKQMPELSQGYNIVGYSQGGLVARALIQFCDNPPVKNFISLGGPH 128 (296)
T ss_pred HHHHHHHHHHHHhcchhccCceEEEEEccccHHHHHHHHhCCCCCcceeEeccCCc
Confidence 4555555555544332 1569999999999999999976654 589999998874
No 225
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=85.18 E-value=1.4 Score=40.02 Aligned_cols=54 Identities=11% Similarity=0.017 Sum_probs=38.7
Q ss_pred hHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHh--CCCccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAE--NPGSVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 142 (279)
.....++|.+-|..+|- ++|.|+|||-||..+..+... -...+++.|+.++...
T Consensus 189 q~~AL~WV~~nI~~FGGDp~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs~~ 246 (535)
T PF00135_consen 189 QRLALKWVQDNIAAFGGDPDNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGSAL 246 (535)
T ss_dssp HHHHHHHHHHHGGGGTEEEEEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--TT
T ss_pred hHHHHHHHHhhhhhcccCCcceeeeeecccccccceeeeccccccccccccccccccc
Confidence 44455666677777885 469999999999987776654 2357999999998643
No 226
>PLN02209 serine carboxypeptidase
Probab=85.06 E-value=2.5 Score=37.61 Aligned_cols=54 Identities=15% Similarity=0.091 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhcC---CccEEEEEeCcchHHHHHHHHh----C------CCccceEEEeeCCCCC
Q 023683 90 DEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAE----N------PGSVKSLTLLDTGIKP 143 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~----~------p~~v~~lvl~~~~~~~ 143 (279)
+++.+-+..+++... -.+++|.|.|+||..+-.+|.. . +-.++++++.++...+
T Consensus 148 ~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 148 KKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHI 214 (437)
T ss_pred HHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccCh
Confidence 444444555554433 3589999999999877666642 1 1146799988887543
No 227
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=84.27 E-value=2.9 Score=37.15 Aligned_cols=56 Identities=13% Similarity=-0.006 Sum_probs=38.5
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhC------------------------CC-CcEEEe-cCCCCCCCcchHHHHHHHh
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADAL------------------------PQ-AKFVGH-SGGRWPQTSRGRAHTRAYT 276 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~------------------------~~-~~~~~i-~~gH~~~~e~p~~~~~~i~ 276 (279)
.++||+..|+.|...+.-..+.+.+.+ .+ .+++++ ++||+++ .+|+..-..+.
T Consensus 347 ~irVLiY~Gd~D~icn~~Gt~~wi~~L~w~~~~~~~~w~~~~~~~G~vk~y~n~ltfv~V~~AGHmVp-~qP~~al~m~~ 425 (433)
T PLN03016 347 GYRSLIYSGDHDIAVPFLATQAWIRSLNYSPIHNWRPWMINNQIAGYTRAYSNKMTFATIKAGGHTAE-YRPNETFIMFQ 425 (433)
T ss_pred CceEEEEECCccccCCcHhHHHHHHhCCCCCCCCcccccCCCEeeeEEEEeCCceEEEEEcCCCCCCC-CCHHHHHHHHH
Confidence 589999999977554442222222221 22 556677 7999997 58999999998
Q ss_pred hcC
Q 023683 277 EDV 279 (279)
Q Consensus 277 ~fl 279 (279)
+|+
T Consensus 426 ~Fi 428 (433)
T PLN03016 426 RWI 428 (433)
T ss_pred HHH
Confidence 885
No 228
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=82.82 E-value=2.9 Score=37.61 Aligned_cols=53 Identities=11% Similarity=-0.001 Sum_probs=40.6
Q ss_pred hHHHHHHHHHHHHhc-C--CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 89 SDEVGRVLGQVIDTF-N--LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l-~--~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
+..++..-.++++.+ + .+.-...|.|-||.-++..|.+||+..++||.-+|+.
T Consensus 95 ~h~~~~~aK~l~~~~Yg~~p~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 95 LHETTVVAKALIEAFYGKAPKYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred HHHHHHHHHHHHHHHhCCCCCceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 333444444555543 2 3457799999999999999999999999999999985
No 229
>COG1073 Hydrolases of the alpha/beta superfamily [General function prediction only]
Probab=81.91 E-value=3 Score=34.22 Aligned_cols=55 Identities=11% Similarity=0.017 Sum_probs=36.8
Q ss_pred CCEEEEeeCCCCcccchhHHHHHhhCCC--CcEEEe-cCCCCCCCcchH---HHHHHHhhc
Q 023683 224 IPMQILWSSVWSKEWSEEGSRVADALPQ--AKFVGH-SGGRWPQTSRGR---AHTRAYTED 278 (279)
Q Consensus 224 ~Pvlii~G~~d~~~~~~~~~~~~~~~~~--~~~~~i-~~gH~~~~e~p~---~~~~~i~~f 278 (279)
+|+++++|.+|...+......+...... .....+ +++|......+. +....+.+|
T Consensus 233 ~P~l~~~G~~D~~vp~~~~~~~~~~~~~~~~~~~~~~~~~H~~~~~~~~~~~~~~~~~~~f 293 (299)
T COG1073 233 RPVLLVHGERDEVVPLRDAEDLYEAARERPKKLLFVPGGGHIDLYDNPPAVEQALDKLAEF 293 (299)
T ss_pred cceEEEecCCCcccchhhhHHHHhhhccCCceEEEecCCccccccCccHHHHHHHHHHHHH
Confidence 8999999987777777666666665554 344555 788998764443 444445444
No 230
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=81.17 E-value=3.3 Score=36.81 Aligned_cols=54 Identities=13% Similarity=0.075 Sum_probs=35.4
Q ss_pred hHHHHHHHHHHHHhc---CCccEEEEEeCcchHHHHHHHHh----C-----C-CccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDTF---NLAPVHLVLHDSALPMSANWVAE----N-----P-GSVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l---~~~~~~lvGhS~Gg~ia~~~a~~----~-----p-~~v~~lvl~~~~~~ 142 (279)
.++.-+-|..++++. .-+++.|.|-|++|...-.+|.. + | -.++|+++-++...
T Consensus 148 A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td 214 (454)
T KOG1282|consen 148 AKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTD 214 (454)
T ss_pred HHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhccccccCCcccceEEEecCcccC
Confidence 344444455555543 34789999999999777666642 2 1 24788888888754
No 231
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=79.77 E-value=5.6 Score=39.62 Aligned_cols=54 Identities=15% Similarity=0.054 Sum_probs=38.2
Q ss_pred ChHHHHHHHHHHHHh-cCCccEEEEEeCcchHHHHHHHHhC--CCccceEEEeeCCC
Q 023683 88 GSDEVGRVLGQVIDT-FNLAPVHLVLHDSALPMSANWVAEN--PGSVKSLTLLDTGI 141 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~-l~~~~~~lvGhS~Gg~ia~~~a~~~--p~~v~~lvl~~~~~ 141 (279)
++++.+.--..-+++ ....|+.++|+|+|+.++..+|... .+....+|+++..+
T Consensus 2163 Sies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma~~Lqe~~~~~~lillDGsp 2219 (2376)
T KOG1202|consen 2163 SIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMASQLQEQQSPAPLILLDGSP 2219 (2376)
T ss_pred hHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHHHHHHhhcCCCcEEEecCch
Confidence 355555544444444 3457999999999999999998643 33456699998875
No 232
>KOG2237 consensus Predicted serine protease [Posttranslational modification, protein turnover, chaperones]
Probab=79.52 E-value=3.2 Score=38.13 Aligned_cols=53 Identities=4% Similarity=-0.054 Sum_probs=42.8
Q ss_pred ChHHHHHHHHHHHHhc--CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 88 GSDEVGRVLGQVIDTF--NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
+++|+..-...+++.- .-++..+.|.|-||.++.....++|+.+.++|+--|.
T Consensus 529 ~f~Dfia~AeyLve~gyt~~~kL~i~G~SaGGlLvga~iN~rPdLF~avia~Vpf 583 (712)
T KOG2237|consen 529 SFDDFIACAEYLVENGYTQPSKLAIEGGSAGGLLVGACINQRPDLFGAVIAKVPF 583 (712)
T ss_pred cHHHHHHHHHHHHHcCCCCccceeEecccCccchhHHHhccCchHhhhhhhcCcc
Confidence 5788888777776642 1257899999999999999999999999988876554
No 233
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=79.14 E-value=1.5 Score=38.17 Aligned_cols=54 Identities=7% Similarity=-0.060 Sum_probs=45.9
Q ss_pred cChHHHHHHHHHHHHhcC---CccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 87 LGSDEVGRVLGQVIDTFN---LAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 87 ~~~~~~~~~l~~~l~~l~---~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
.|+++-++|...+++.++ -++.+--|-|-||+.++.+=.-||+-|.+.|..-++
T Consensus 112 Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVAP 168 (448)
T PF05576_consen 112 LTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVAP 168 (448)
T ss_pred ccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeecc
Confidence 489999999998887764 367888899999999999989999999988876555
No 234
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=76.70 E-value=1.9 Score=36.53 Aligned_cols=30 Identities=10% Similarity=0.175 Sum_probs=24.0
Q ss_pred HHHHHHhcCCccEEEEEeCcchHHHHHHHH
Q 023683 96 LGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 96 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
+.++++..|+.+-.++|||+|=+.|+.++.
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 345668889999999999999888776553
No 235
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=76.58 E-value=5.2 Score=33.67 Aligned_cols=56 Identities=18% Similarity=0.240 Sum_probs=42.1
Q ss_pred ChHHHHHHHHHHHHhc-------CCccEEEEEeCcchHHHHHHHHhC---------CCccceEEEeeCCCCC
Q 023683 88 GSDEVGRVLGQVIDTF-------NLAPVHLVLHDSALPMSANWVAEN---------PGSVKSLTLLDTGIKP 143 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l-------~~~~~~lvGhS~Gg~ia~~~a~~~---------p~~v~~lvl~~~~~~~ 143 (279)
+..+++.|+..+++.+ ...|++++..|+||-+|..++... ...+.+++|-++.+.+
T Consensus 97 ~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~~VaLGDSWISP 168 (414)
T KOG1283|consen 97 NNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFIGVALGDSWISP 168 (414)
T ss_pred cHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecceeEEccCcccCh
Confidence 4677888888887753 346899999999999998887542 2246788888887654
No 236
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=75.16 E-value=63 Score=29.12 Aligned_cols=52 Identities=8% Similarity=0.011 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
-+.+.+.|.+.++.||. +.++|-|-|||..=|+.|+++... .++|+--|..+
T Consensus 338 E~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l~P--~AIiVgKPL~N 391 (511)
T TIGR03712 338 EQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKLSP--HAIIVGKPLVN 391 (511)
T ss_pred HHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccCCC--ceEEEcCcccc
Confidence 45577777888888886 469999999999999999987532 47776666554
No 237
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=74.96 E-value=1.7 Score=38.60 Aligned_cols=53 Identities=13% Similarity=0.045 Sum_probs=40.2
Q ss_pred hHHHHHHHHHHHHhcCCc--cEEEEEeCcchHHHHHHHHhCCC---ccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAENPG---SVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 142 (279)
.-...+++.+-|+++|-+ .|.|+|+|-||+.++.+.+. |. .+++.|+.++...
T Consensus 161 qilALkWV~~NIe~FGGDp~NVTl~GeSAGa~si~~Lla~-P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 161 QILALKWVRDNIEAFGGDPQNVTLFGESAGAASILTLLAV-PSAKGLFHRAIALSGAAS 218 (491)
T ss_pred HHHHHHHHHHHHHHhCCCccceEEeeccchHHHHHHhhcC-ccchHHHHHHHHhCCCCC
Confidence 444566777888888864 69999999999988877653 43 5788888888764
No 238
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=74.89 E-value=3.4 Score=34.46 Aligned_cols=28 Identities=14% Similarity=0.139 Sum_probs=23.3
Q ss_pred HHHHhcCCccEEEEEeCcchHHHHHHHH
Q 023683 98 QVIDTFNLAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 98 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
+++..+|+++-.++|||+|-..|+.++.
T Consensus 74 ~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 74 RLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 4567889999999999999988877664
No 239
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=74.58 E-value=7.4 Score=35.62 Aligned_cols=51 Identities=8% Similarity=-0.012 Sum_probs=39.1
Q ss_pred ChHHHHHHHHHHHHhcCC---ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeC
Q 023683 88 GSDEVGRVLGQVIDTFNL---APVHLVLHDSALPMSANWVAENPGSVKSLTLLDT 139 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~ 139 (279)
-++|+......++++ |+ +++-+-|-|-||.+.-....++|+.+.++|.--|
T Consensus 480 vfdDf~AVaedLi~r-gitspe~lgi~GgSNGGLLvg~alTQrPelfgA~v~evP 533 (648)
T COG1505 480 VFDDFIAVAEDLIKR-GITSPEKLGIQGGSNGGLLVGAALTQRPELFGAAVCEVP 533 (648)
T ss_pred hhHHHHHHHHHHHHh-CCCCHHHhhhccCCCCceEEEeeeccChhhhCceeeccc
Confidence 367777777766654 33 5688999999999999888999998887775444
No 240
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=72.98 E-value=4 Score=34.08 Aligned_cols=29 Identities=7% Similarity=-0.148 Sum_probs=23.5
Q ss_pred HHHHHhcCCccEEEEEeCcchHHHHHHHH
Q 023683 97 GQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 97 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
.+++...++++..++|||+|=..|..++.
T Consensus 67 ~~~l~~~g~~P~~v~GhS~GE~aAa~~aG 95 (295)
T TIGR03131 67 WRALLALLPRPSAVAGYSVGEYAAAVVAG 95 (295)
T ss_pred HHHHHhcCCCCcEEeecCHHHHHHHHHhC
Confidence 34567778899999999999988887664
No 241
>KOG4372 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=72.97 E-value=1.8 Score=37.43 Aligned_cols=36 Identities=6% Similarity=0.162 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHH
Q 023683 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
...++++.+.+....++++..||||.||.++..+..
T Consensus 134 ~Rla~~~~e~~~~~si~kISfvghSLGGLvar~AIg 169 (405)
T KOG4372|consen 134 ERLAEEVKETLYDYSIEKISFVGHSLGGLVARYAIG 169 (405)
T ss_pred cccHHHHhhhhhccccceeeeeeeecCCeeeeEEEE
Confidence 334555555555566789999999999998776543
No 242
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.73 E-value=13 Score=27.98 Aligned_cols=34 Identities=15% Similarity=0.070 Sum_probs=26.3
Q ss_pred ccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCCC
Q 023683 106 APVHLVLHDSALPMSANWVAENPGSVKSLTLLDTGI 141 (279)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~~ 141 (279)
+.+.||++|||-.+|-.+....+ +++-+.+++..
T Consensus 57 ~hirlvAwSMGVwvAeR~lqg~~--lksatAiNGTg 90 (214)
T COG2830 57 RHIRLVAWSMGVWVAERVLQGIR--LKSATAINGTG 90 (214)
T ss_pred hhhhhhhhhHHHHHHHHHHhhcc--ccceeeecCCC
Confidence 46889999999999988776544 67777777653
No 243
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=71.27 E-value=4.4 Score=33.64 Aligned_cols=29 Identities=10% Similarity=-0.081 Sum_probs=22.9
Q ss_pred HHHHhcC-CccEEEEEeCcchHHHHHHHHh
Q 023683 98 QVIDTFN-LAPVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 98 ~~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~ 126 (279)
.++...+ +.+..++|||+|=..|+.++..
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG~ 103 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAGA 103 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhCC
Confidence 4456677 8999999999999888776643
No 244
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=69.94 E-value=6 Score=33.36 Aligned_cols=32 Identities=6% Similarity=-0.019 Sum_probs=26.0
Q ss_pred HHHHHHhcCCccEEEEEeCcchHHHHHHHHhC
Q 023683 96 LGQVIDTFNLAPVHLVLHDSALPMSANWVAEN 127 (279)
Q Consensus 96 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 127 (279)
+.+.+++.++..-.++|-|+|+.++..+|..+
T Consensus 33 vL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 33 VIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 33455667888888999999999999999864
No 245
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=69.37 E-value=22 Score=24.43 Aligned_cols=44 Identities=11% Similarity=0.195 Sum_probs=33.9
Q ss_pred HHHHHHHHHhcCCccEEEEEeCcchH--HHHHHHHhCCCccceEEE
Q 023683 93 GRVLGQVIDTFNLAPVHLVLHDSALP--MSANWVAENPGSVKSLTL 136 (279)
Q Consensus 93 ~~~l~~~l~~l~~~~~~lvGhS~Gg~--ia~~~a~~~p~~v~~lvl 136 (279)
...|..+++.+.-.+++|||=|--.= +-..+|.++|++|.++.+
T Consensus 52 ~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~i~ai~I 97 (100)
T PF09949_consen 52 RDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGRILAIYI 97 (100)
T ss_pred HHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCCEEEEEE
Confidence 45677788888889999999886553 444567899999988764
No 246
>PRK10279 hypothetical protein; Provisional
Probab=69.23 E-value=5.8 Score=33.35 Aligned_cols=33 Identities=3% Similarity=-0.036 Sum_probs=26.7
Q ss_pred HHHHHhcCCccEEEEEeCcchHHHHHHHHhCCC
Q 023683 97 GQVIDTFNLAPVHLVLHDSALPMSANWVAENPG 129 (279)
Q Consensus 97 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 129 (279)
.+.+++.++..-.++|-|+|+.++..||.....
T Consensus 24 L~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~~ 56 (300)
T PRK10279 24 INALKKVGIEIDIVAGCSIGSLVGAAYACDRLS 56 (300)
T ss_pred HHHHHHcCCCcCEEEEEcHHHHHHHHHHcCChH
Confidence 345566888888999999999999999976543
No 247
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=68.70 E-value=6.2 Score=33.26 Aligned_cols=33 Identities=6% Similarity=-0.028 Sum_probs=27.5
Q ss_pred HHHHHhcCCccEEEEEeCcchHHHHHHHHhCCC
Q 023683 97 GQVIDTFNLAPVHLVLHDSALPMSANWVAENPG 129 (279)
Q Consensus 97 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 129 (279)
.+.++..++..-++.|-|+|+.++..+|..+.+
T Consensus 30 l~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~~ 62 (306)
T COG1752 30 LKALEEAGIPIDVIAGTSAGAIVAALYAAGMDE 62 (306)
T ss_pred HHHHHHcCCCccEEEecCHHHHHHHHHHcCCCh
Confidence 445677889999999999999999999986543
No 248
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=68.13 E-value=12 Score=29.37 Aligned_cols=51 Identities=8% Similarity=0.021 Sum_probs=37.8
Q ss_pred ccChHHHHHHHHHHHHhcCCccEEEEEeCc----chHHHHHHHHhCC-CccceEEEe
Q 023683 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDS----ALPMSANWVAENP-GSVKSLTLL 137 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~----Gg~ia~~~a~~~p-~~v~~lvl~ 137 (279)
.|+.+.+++.+.+++++.+ -.++|+|||. |..++-.+|++.. ..+..++-+
T Consensus 90 ~~~~e~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarLga~lvsdv~~l 145 (202)
T cd01714 90 GADTLATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELLGWPQITYVSKI 145 (202)
T ss_pred CCChHHHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHhCCCccceEEEE
Confidence 4678889999999888877 6788999998 7788888887642 234444444
No 249
>PF11713 Peptidase_C80: Peptidase C80 family; InterPro: IPR020974 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry identifies a domain that functions as a cysteine peptidase that belongs to MEROPS peptidase family C80 (RTX self-cleaving toxin, clan CD). This domain is found in bacterial toxins that self-process by a cysteine peptidase mechanism. These include Vibrio cholerae RTX toxin [], and Clostridium difficile toxins A and B []. Some pathogenic bacteria produce unrelated toxins that also require activation and processing, the processing often being autolytic as it is in anthrax lethal factor, tentoxilysin (the tetanus neurotoxin) and bontoxilysin (the botulinum neurotoxin), all of which are metallopeptidases.; PDB: 3GCD_C 3EEB_B 3FZY_A 3PEE_A 3PA8_B 3HO6_A.
Probab=67.80 E-value=6.1 Score=29.70 Aligned_cols=33 Identities=21% Similarity=0.194 Sum_probs=23.3
Q ss_pred ccChHHHHHHH----HHHHHhcC----CccEEEEEeCcchH
Q 023683 86 ELGSDEVGRVL----GQVIDTFN----LAPVHLVLHDSALP 118 (279)
Q Consensus 86 ~~~~~~~~~~l----~~~l~~l~----~~~~~lvGhS~Gg~ 118 (279)
+++.+++++.+ ..+.+..+ .+++.|||.|++..
T Consensus 76 g~~a~~La~~l~~~~~~l~~~~~~~~~P~~IsLvGC~l~~~ 116 (157)
T PF11713_consen 76 GYSADELANKLIKFKQQLKQKYGINISPKKISLVGCSLADN 116 (157)
T ss_dssp TEEHHHHHHHHHHHHHHHHHHHTTT--ESEEEEESSS-S-T
T ss_pred CCCHHHHHHHHHHHHHHHHHhccCCCCCCEEEEEEecccCC
Confidence 46788999888 55555543 36799999999987
No 250
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=65.20 E-value=8.8 Score=29.14 Aligned_cols=30 Identities=3% Similarity=-0.148 Sum_probs=24.3
Q ss_pred HHHhcCCccEEEEEeCcchHHHHHHHHhCC
Q 023683 99 VIDTFNLAPVHLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 99 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 128 (279)
.+.+.++..-.++|-|.|+.++..++...+
T Consensus 19 aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 19 ALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 445557778889999999999999998654
No 251
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=64.48 E-value=8.9 Score=31.67 Aligned_cols=31 Identities=6% Similarity=-0.070 Sum_probs=25.3
Q ss_pred HHHHHhcCCccEEEEEeCcchHHHHHHHHhC
Q 023683 97 GQVIDTFNLAPVHLVLHDSALPMSANWVAEN 127 (279)
Q Consensus 97 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 127 (279)
.+.+++.++..-.++|-|+|+.++..||...
T Consensus 29 L~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 29 LQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 3445677888778999999999999999764
No 252
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=63.61 E-value=9.5 Score=29.47 Aligned_cols=29 Identities=3% Similarity=-0.056 Sum_probs=23.5
Q ss_pred HHHhcCCccEEEEEeCcchHHHHHHHHhC
Q 023683 99 VIDTFNLAPVHLVLHDSALPMSANWVAEN 127 (279)
Q Consensus 99 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 127 (279)
.+++.++..-.++|-|.||.++..++..+
T Consensus 20 ~L~e~~~~~d~i~GtSaGai~aa~~a~g~ 48 (194)
T cd07207 20 ALEEAGILKKRVAGTSAGAITAALLALGY 48 (194)
T ss_pred HHHHcCCCcceEEEECHHHHHHHHHHcCC
Confidence 34556777788999999999999999754
No 253
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=60.60 E-value=8.9 Score=35.07 Aligned_cols=32 Identities=16% Similarity=0.085 Sum_probs=25.7
Q ss_pred HHHHH-HhcCCccEEEEEeCcchHHHHHHHHhC
Q 023683 96 LGQVI-DTFNLAPVHLVLHDSALPMSANWVAEN 127 (279)
Q Consensus 96 l~~~l-~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 127 (279)
+.+++ +.+|++|-.++|||+|=..|+..|.-.
T Consensus 254 La~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 254 LTQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 34455 579999999999999999888877644
No 254
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=60.47 E-value=13 Score=29.71 Aligned_cols=29 Identities=7% Similarity=0.086 Sum_probs=23.2
Q ss_pred HHhcCCccEEEEEeCcchHHHHHHHHhCC
Q 023683 100 IDTFNLAPVHLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 100 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 128 (279)
+...+++.-.++|-|.|+.++..+|...+
T Consensus 22 L~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 22 LLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 34457777789999999999999997543
No 255
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=59.61 E-value=7.7 Score=34.70 Aligned_cols=26 Identities=8% Similarity=-0.073 Sum_probs=21.1
Q ss_pred EEEecCCCCCCCcchHHHHHHHhhcC
Q 023683 254 FVGHSGGRWPQTSRGRAHTRAYTEDV 279 (279)
Q Consensus 254 ~~~i~~gH~~~~e~p~~~~~~i~~fl 279 (279)
+.++++||+++.++|+...+.+..|+
T Consensus 463 ~r~y~aGHMvp~d~P~~~~~~~~~~~ 488 (498)
T COG2939 463 LRIYEAGHMVPYDRPESSLEMVNLWI 488 (498)
T ss_pred EEEecCcceeecCChHHHHHHHHHHH
Confidence 34448999999999999988887663
No 256
>COG0218 Predicted GTPase [General function prediction only]
Probab=57.16 E-value=19 Score=28.18 Aligned_cols=14 Identities=43% Similarity=0.819 Sum_probs=12.8
Q ss_pred EEEecCCCCCCCCC
Q 023683 12 VIAVDLPGNGFSDR 25 (279)
Q Consensus 12 vi~~D~~G~G~S~~ 25 (279)
+..+|+||||....
T Consensus 72 ~~lVDlPGYGyAkv 85 (200)
T COG0218 72 LRLVDLPGYGYAKV 85 (200)
T ss_pred EEEEeCCCcccccC
Confidence 77899999999988
No 257
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=56.48 E-value=15 Score=29.13 Aligned_cols=31 Identities=10% Similarity=0.059 Sum_probs=25.0
Q ss_pred HHHHhcCCccEEEEEeCcchHHHHHHHHhCC
Q 023683 98 QVIDTFNLAPVHLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 98 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 128 (279)
+.+.+.++..-.++|.|.|+.++..+|...+
T Consensus 18 ~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 18 KALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3445567777789999999999999998765
No 258
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=55.55 E-value=25 Score=31.47 Aligned_cols=56 Identities=5% Similarity=-0.136 Sum_probs=38.3
Q ss_pred CCEEEEeeCCCCcccchhHHHHHhh-------------------------CCCCcEEEe-cCCCCCCCcchHHHHHHHhh
Q 023683 224 IPMQILWSSVWSKEWSEEGSRVADA-------------------------LPQAKFVGH-SGGRWPQTSRGRAHTRAYTE 277 (279)
Q Consensus 224 ~Pvlii~G~~d~~~~~~~~~~~~~~-------------------------~~~~~~~~i-~~gH~~~~e~p~~~~~~i~~ 277 (279)
.+++|..|+.|...+.-..+.+.+. ..+..+..+ ++||.+..++|+..-..+..
T Consensus 364 ~rvliysGD~D~~~p~~gt~~~i~~L~~~~~~~~~pW~~~~~qvaG~~~~Y~~ltf~tVrGaGH~VP~~~p~~al~m~~~ 443 (454)
T KOG1282|consen 364 YRVLIYSGDHDLVVPFLGTQAWIKSLNLSITDEWRPWYHKGGQVAGYTKTYGGLTFATVRGAGHMVPYDKPESALIMFQR 443 (454)
T ss_pred eEEEEEeCCcceeCcchhhHHHHHhccCccccCccCCccCCCceeeeEEEecCEEEEEEeCCcccCCCCCcHHHHHHHHH
Confidence 7999999998765554222222111 122334566 89999999999998888888
Q ss_pred cC
Q 023683 278 DV 279 (279)
Q Consensus 278 fl 279 (279)
||
T Consensus 444 fl 445 (454)
T KOG1282|consen 444 FL 445 (454)
T ss_pred HH
Confidence 75
No 259
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=54.10 E-value=29 Score=27.15 Aligned_cols=46 Identities=20% Similarity=0.153 Sum_probs=26.4
Q ss_pred HHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCC--CccceEEEe
Q 023683 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENP--GSVKSLTLL 137 (279)
Q Consensus 92 ~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~ 137 (279)
..+.+.++++......++||--+..+.-.+..+..+- -.+.++|+.
T Consensus 101 ~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlT 148 (196)
T PF00448_consen 101 LLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILT 148 (196)
T ss_dssp HHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEE
T ss_pred HHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEEE
Confidence 3455555666655556776666666665655444332 246788865
No 260
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=52.69 E-value=56 Score=27.40 Aligned_cols=56 Identities=16% Similarity=0.112 Sum_probs=43.6
Q ss_pred ccChHHHHHHHHHHHHhcCCccEEEEEeCcchHH-----HHHHHHhCCCccceEEEeeCCCC
Q 023683 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPM-----SANWVAENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~i-----a~~~a~~~p~~v~~lvl~~~~~~ 142 (279)
.++++++.+.+.+.+..+|-+ +++++-+.-+.- ++.-+...|..-.+++++++++.
T Consensus 150 ~FdldDYIdyvie~~~~~Gp~-~hv~aVCQP~vPvLAAisLM~~~~~p~~PssMtlmGgPID 210 (415)
T COG4553 150 HFDLDDYIDYVIEMINFLGPD-AHVMAVCQPTVPVLAAISLMEEDGDPNVPSSMTLMGGPID 210 (415)
T ss_pred CccHHHHHHHHHHHHHHhCCC-CcEEEEecCCchHHHHHHHHHhcCCCCCCceeeeecCccc
Confidence 368999999999999999954 888888876543 33334467878899999999863
No 261
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=51.89 E-value=22 Score=27.04 Aligned_cols=29 Identities=7% Similarity=-0.031 Sum_probs=23.3
Q ss_pred HHhcCCccEEEEEeCcchHHHHHHHHhCC
Q 023683 100 IDTFNLAPVHLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 100 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p 128 (279)
++..++..-.++|-|.|+.++..++...+
T Consensus 22 L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 22 LEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 34556777789999999999999997654
No 262
>KOG2551 consensus Phospholipase/carboxyhydrolase [Amino acid transport and metabolism]
Probab=51.02 E-value=35 Score=27.21 Aligned_cols=52 Identities=13% Similarity=0.032 Sum_probs=35.7
Q ss_pred hHHHHHHHHHHHHhcCCccEE-EEEeCcchHHHHHHHHhCCC--------ccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDTFNLAPVH-LVLHDSALPMSANWVAENPG--------SVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~--------~v~~lvl~~~~~~ 142 (279)
.+.-.+.|.+.+.+.| |+. |+|.|-|+.++..++...+. .++=+|++++...
T Consensus 88 ~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~ 148 (230)
T KOG2551|consen 88 FEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKF 148 (230)
T ss_pred hHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCC
Confidence 5556777777777766 655 89999999999998872111 2455666666543
No 263
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=50.25 E-value=85 Score=28.00 Aligned_cols=16 Identities=31% Similarity=0.688 Sum_probs=12.2
Q ss_pred hhcCccEEEecCCCCC
Q 023683 6 RSKKFNVIAVDLPGNG 21 (279)
Q Consensus 6 ~~~G~~vi~~D~~G~G 21 (279)
.+.+|+++.+|-+|.-
T Consensus 179 ~~~~~DvViIDTaGr~ 194 (429)
T TIGR01425 179 KKENFDIIIVDTSGRH 194 (429)
T ss_pred HhCCCCEEEEECCCCC
Confidence 3457999999999853
No 264
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=49.96 E-value=24 Score=32.36 Aligned_cols=54 Identities=13% Similarity=0.016 Sum_probs=36.4
Q ss_pred hHHHHHHHHHHHHhcCC--ccEEEEEeCcchHHHHHHHHh--CCCccceEEEeeCCCC
Q 023683 89 SDEVGRVLGQVIDTFNL--APVHLVLHDSALPMSANWVAE--NPGSVKSLTLLDTGIK 142 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a~~--~p~~v~~lvl~~~~~~ 142 (279)
...-.+++.+-+...|- ++|.|+|||.||..+..+... ....+++.|.+++...
T Consensus 176 q~~AL~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~ 233 (545)
T KOG1516|consen 176 QLLALRWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNAL 233 (545)
T ss_pred HHHHHHHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhccccc
Confidence 33445555566667764 579999999999998776642 1245777777776643
No 265
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=49.07 E-value=29 Score=29.35 Aligned_cols=19 Identities=0% Similarity=-0.074 Sum_probs=16.5
Q ss_pred EEEEeCcchHHHHHHHHhC
Q 023683 109 HLVLHDSALPMSANWVAEN 127 (279)
Q Consensus 109 ~lvGhS~Gg~ia~~~a~~~ 127 (279)
.+.|-|+||.||..++..+
T Consensus 35 ~i~GTStGgiIA~~la~g~ 53 (312)
T cd07212 35 WIAGTSTGGILALALLHGK 53 (312)
T ss_pred EEEeeChHHHHHHHHHcCC
Confidence 4889999999999999754
No 266
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=48.47 E-value=27 Score=26.46 Aligned_cols=28 Identities=7% Similarity=-0.008 Sum_probs=22.2
Q ss_pred HHhcCCccEEEEEeCcchHHHHHHHHhC
Q 023683 100 IDTFNLAPVHLVLHDSALPMSANWVAEN 127 (279)
Q Consensus 100 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~ 127 (279)
+++.++..-.++|-|.|+.++..++...
T Consensus 22 L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 22 LEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 3445666678999999999999998653
No 267
>PRK14974 cell division protein FtsY; Provisional
Probab=46.49 E-value=86 Score=26.92 Aligned_cols=45 Identities=13% Similarity=-0.026 Sum_probs=26.9
Q ss_pred HHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCC--CccceEEEe
Q 023683 93 GRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENP--GSVKSLTLL 137 (279)
Q Consensus 93 ~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p--~~v~~lvl~ 137 (279)
.+.+..+.+....+.+++|.-+.-|.-+...+..+. -.+.++|+.
T Consensus 241 m~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlT 287 (336)
T PRK14974 241 MDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILT 287 (336)
T ss_pred HHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEe
Confidence 444455555555556677777777766666665443 346777764
No 268
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=46.37 E-value=11 Score=33.49 Aligned_cols=33 Identities=12% Similarity=0.058 Sum_probs=25.6
Q ss_pred HHHhcCCccEEEEEeCcchHHHHHHHHhCCCcc
Q 023683 99 VIDTFNLAPVHLVLHDSALPMSANWVAENPGSV 131 (279)
Q Consensus 99 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 131 (279)
.+...++.+-++.|-|.|+.+|..++...++.+
T Consensus 94 aL~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 94 ALFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 334456667789999999999999998666554
No 269
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=45.93 E-value=29 Score=28.43 Aligned_cols=32 Identities=6% Similarity=0.007 Sum_probs=24.1
Q ss_pred HHHhcCCc-cEEEEEeCcchHHHHHHHHhCCCc
Q 023683 99 VIDTFNLA-PVHLVLHDSALPMSANWVAENPGS 130 (279)
Q Consensus 99 ~l~~l~~~-~~~lvGhS~Gg~ia~~~a~~~p~~ 130 (279)
.+.+.++. .=.++|-|.|+.++..++...+.+
T Consensus 19 al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~~ 51 (266)
T cd07208 19 AFLEAGIRPFDLVIGVSAGALNAASYLSGQRGR 51 (266)
T ss_pred HHHHcCCCCCCEEEEECHHHHhHHHHHhCCcch
Confidence 33445555 457999999999999999876543
No 270
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=42.37 E-value=12 Score=32.61 Aligned_cols=38 Identities=8% Similarity=-0.045 Sum_probs=28.3
Q ss_pred HHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEE
Q 023683 98 QVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLT 135 (279)
Q Consensus 98 ~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lv 135 (279)
+.+...|+.+=++.|-|.|+.+|..+|..-++.+..+.
T Consensus 103 kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~l 140 (391)
T cd07229 103 KALWLRGLLPRIITGTATGALIAALVGVHTDEELLRFL 140 (391)
T ss_pred HHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHHH
Confidence 34455677777899999999999999986555554443
No 271
>KOG0781 consensus Signal recognition particle receptor, alpha subunit [Intracellular trafficking, secretion, and vesicular transport]
Probab=41.82 E-value=86 Score=28.34 Aligned_cols=46 Identities=13% Similarity=0.088 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHh---------CCCccceEEEe
Q 023683 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAE---------NPGSVKSLTLL 137 (279)
Q Consensus 92 ~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~---------~p~~v~~lvl~ 137 (279)
+...+..+++....+.+..||.-+=|.-++.-+.+ .|..+.++++.
T Consensus 484 lm~~l~k~~~~~~pd~i~~vgealvg~dsv~q~~~fn~al~~~~~~r~id~~~lt 538 (587)
T KOG0781|consen 484 LMTSLAKLIKVNKPDLILFVGEALVGNDSVDQLKKFNRALADHSTPRLIDGILLT 538 (587)
T ss_pred HHHHHHHHHhcCCCceEEEehhhhhCcHHHHHHHHHHHHHhcCCCccccceEEEE
Confidence 45556667777777888888887777766654432 24457777664
No 272
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=40.40 E-value=74 Score=29.46 Aligned_cols=49 Identities=14% Similarity=0.217 Sum_probs=37.1
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEe------CcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLH------DSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGh------S~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
...+...+.+.+.. .++|+++|| +.|+++++..-+..-.+ .+.++++|.
T Consensus 323 aRvis~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~ 377 (655)
T COG3887 323 ARVISTALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPE 377 (655)
T ss_pred HHHHHHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECcc
Confidence 55566666666665 579999999 78999999876655444 788888876
No 273
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=40.32 E-value=12 Score=32.93 Aligned_cols=35 Identities=14% Similarity=0.096 Sum_probs=26.9
Q ss_pred HHhcCCccEEEEEeCcchHHHHHHHHhCCCccceE
Q 023683 100 IDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSL 134 (279)
Q Consensus 100 l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 134 (279)
+...++.+=+++|-|.|+.+|..++...++.+..+
T Consensus 89 L~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 89 LLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 34456777789999999999999998666655444
No 274
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=39.91 E-value=15 Score=31.07 Aligned_cols=31 Identities=10% Similarity=0.003 Sum_probs=23.5
Q ss_pred HHHhcCCccEEEEEeCcchHHHHHHHHhCCC
Q 023683 99 VIDTFNLAPVHLVLHDSALPMSANWVAENPG 129 (279)
Q Consensus 99 ~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~ 129 (279)
.+...++.+-++.|-|.|+.+|..++..-++
T Consensus 89 aL~e~gl~p~~i~GsSaGAivaa~~~~~t~~ 119 (323)
T cd07231 89 TLVEHQLLPRVIAGSSVGSIVCAIIATRTDE 119 (323)
T ss_pred HHHHcCCCCCEEEEECHHHHHHHHHHcCCHH
Confidence 3344577777899999999999998875433
No 275
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=38.91 E-value=35 Score=27.89 Aligned_cols=20 Identities=5% Similarity=0.007 Sum_probs=15.1
Q ss_pred CCccEEEEEeCcchHHHHHH
Q 023683 104 NLAPVHLVLHDSALPMSANW 123 (279)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~ 123 (279)
.++.++++|||+|..=...+
T Consensus 233 ~i~~I~i~GhSl~~~D~~Yf 252 (270)
T PF14253_consen 233 DIDEIIIYGHSLGEVDYPYF 252 (270)
T ss_pred CCCEEEEEeCCCchhhHHHH
Confidence 35789999999998654443
No 276
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=38.87 E-value=42 Score=27.00 Aligned_cols=35 Identities=11% Similarity=-0.103 Sum_probs=24.7
Q ss_pred HHHHHHHHHhcCCc--cEEEEEeCcchHHHHHHHHhCC
Q 023683 93 GRVLGQVIDTFNLA--PVHLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 93 ~~~l~~~l~~l~~~--~~~lvGhS~Gg~ia~~~a~~~p 128 (279)
+-.+..+ ...++. .-.++|-|.|+.++..++...+
T Consensus 15 ~GVl~~L-~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 15 LGVLSLL-IEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHH-HHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 3334444 445654 3479999999999999998654
No 277
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=38.60 E-value=1.5e+02 Score=22.61 Aligned_cols=28 Identities=18% Similarity=0.237 Sum_probs=23.2
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcc
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSA 116 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~G 116 (279)
..++.+.+.++.+..+.+++.+|..|.|
T Consensus 61 ~~~~~~~~~~l~~~~~~~~v~IvSNsaG 88 (168)
T PF09419_consen 61 PPEYAEWLNELKKQFGKDRVLIVSNSAG 88 (168)
T ss_pred CHHHHHHHHHHHHHCCCCeEEEEECCCC
Confidence 4567888888888877778999999986
No 278
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=36.45 E-value=67 Score=26.73 Aligned_cols=53 Identities=6% Similarity=-0.152 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHhcCC---ccEEEEEeCcchHHHHHHHH---hCCCccceEEEeeCCCC
Q 023683 90 DEVGRVLGQVIDTFNL---APVHLVLHDSALPMSANWVA---ENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~---~~~~lvGhS~Gg~ia~~~a~---~~p~~v~~lvl~~~~~~ 142 (279)
..+.+.+...+..+.- .+++|.|.|+|+.-+...-. ..-+++.+.++.+++..
T Consensus 90 ~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~ 148 (289)
T PF10081_consen 90 RALFEAVYARWSTLPEDRRPKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFF 148 (289)
T ss_pred HHHHHHHHHHHHhCCcccCCeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCC
Confidence 3344445544555543 36999999999887665432 33456999999988754
No 279
>PF06850 PHB_depo_C: PHB de-polymerase C-terminus; InterPro: IPR009656 This entry represents the C terminus of bacterial poly(3-hydroxybutyrate) (PHB) de-polymerase. This degrades PHB granules to oligomers and monomers of 3-hydroxy-butyric acid.
Probab=36.16 E-value=37 Score=26.55 Aligned_cols=58 Identities=7% Similarity=-0.027 Sum_probs=37.9
Q ss_pred cCCCEEEEeeCCCCcccc---hhHHHHHhhCCCCc--EEEe-cCCCCCCCcch---HHHHHHHhhcC
Q 023683 222 KGIPMQILWSSVWSKEWS---EEGSRVADALPQAK--FVGH-SGGRWPQTSRG---RAHTRAYTEDV 279 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~---~~~~~~~~~~~~~~--~~~i-~~gH~~~~e~p---~~~~~~i~~fl 279 (279)
-+++.|-|-|++|...-. ..+..++..+|... .++. ++||+-.+.-+ +++...|.+|+
T Consensus 133 ~~taLlTVEGe~DDIsg~GQT~AA~~LC~glp~~~k~~~~~~g~GHYGlF~G~rwr~~I~P~i~~fi 199 (202)
T PF06850_consen 133 RRTALLTVEGERDDISGPGQTHAAHDLCTGLPADMKRHHLQPGVGHYGLFNGSRWREEIYPRIREFI 199 (202)
T ss_pred ccceeEEeecCcccCCcchHHHHHHHHhcCCCHHHhhhcccCCCCeeecccchhhhhhhhHHHHHHH
Confidence 467888899998654444 55667777776543 2334 68999776543 45666666653
No 280
>TIGR00064 ftsY signal recognition particle-docking protein FtsY. There is a weak division between FtsY and SRP54; both are GTPases. In E.coli, ftsY is an essential gene located in an operon with cell division genes ftsE and ftsX, but its apparent function is as the signal recognition particle docking protein.
Probab=34.86 E-value=1.9e+02 Score=23.97 Aligned_cols=19 Identities=16% Similarity=0.338 Sum_probs=14.6
Q ss_pred hcCccEEEecCCCCCCCCC
Q 023683 7 SKKFNVIAVDLPGNGFSDR 25 (279)
Q Consensus 7 ~~G~~vi~~D~~G~G~S~~ 25 (279)
.+||.++.+|-+|....+.
T Consensus 152 ~~~~D~ViIDT~G~~~~d~ 170 (272)
T TIGR00064 152 ARNIDVVLIDTAGRLQNKV 170 (272)
T ss_pred HCCCCEEEEeCCCCCcchH
Confidence 4569999999998876544
No 281
>COG4813 ThuA Trehalose utilization protein [Carbohydrate transport and metabolism]
Probab=34.12 E-value=66 Score=24.93 Aligned_cols=42 Identities=14% Similarity=0.159 Sum_probs=30.4
Q ss_pred cCCCEEEEeeCCCCcccc-hhHHHHHhhC-CCCcEEEecCCCCC
Q 023683 222 KGIPMQILWSSVWSKEWS-EEGSRVADAL-PQAKFVGHSGGRWP 263 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~-~~~~~~~~~~-~~~~~~~i~~gH~~ 263 (279)
-+.-||+-||..|.+... +.++++.++. .+.-++++.+||+.
T Consensus 62 a~tDVLiWWGH~~Hg~V~D~iVeRV~kRV~EGMGLiVLHSGHfS 105 (261)
T COG4813 62 AKTDVLIWWGHKDHGAVEDEIVERVQKRVWEGMGLIVLHSGHFS 105 (261)
T ss_pred hccceEEEeccccccccchHHHHHHHHHHhcccceEEEeccchh
Confidence 457799999998766655 5666666654 56667777889973
No 282
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=33.67 E-value=60 Score=26.32 Aligned_cols=20 Identities=5% Similarity=-0.054 Sum_probs=18.0
Q ss_pred EEEEeCcchHHHHHHHHhCC
Q 023683 109 HLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 109 ~lvGhS~Gg~ia~~~a~~~p 128 (279)
.++|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 79999999999999998654
No 283
>cd08769 DAP_dppA_2 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=31.61 E-value=1.6e+02 Score=24.48 Aligned_cols=51 Identities=20% Similarity=0.274 Sum_probs=34.5
Q ss_pred ccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-c-CCCCC-CCcchHHHHHHHhh
Q 023683 221 IKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-S-GGRWP-QTSRGRAHTRAYTE 277 (279)
Q Consensus 221 ~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~-~gH~~-~~e~p~~~~~~i~~ 277 (279)
...+||.++.|+ +. ..++..+.+|+++.+.+ . -|++. ..-.|++..+.|.+
T Consensus 145 ~~gVPV~lVsGD---d~---~~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~I~~ 198 (270)
T cd08769 145 EFGVPVVLVAGD---SE---LEKEVKEETPWAVFVPTKESLSRYSAKSPSMKKVKEELRE 198 (270)
T ss_pred hcCCCEEEEecC---HH---HHHHHHHhCCCceEEEEeeecCCCccccCCHHHHHHHHHH
Confidence 357999999998 32 34555666799998888 4 46544 34456766666653
No 284
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=31.56 E-value=58 Score=18.54 Aligned_cols=15 Identities=27% Similarity=0.277 Sum_probs=11.8
Q ss_pred hcCccEEEecCCCCC
Q 023683 7 SKKFNVIAVDLPGNG 21 (279)
Q Consensus 7 ~~G~~vi~~D~~G~G 21 (279)
..||.+..+|+||.-
T Consensus 11 ~~~y~~~~pdlpg~~ 25 (48)
T PF03681_consen 11 DGGYVAYFPDLPGCF 25 (48)
T ss_dssp SSSEEEEETTCCTCE
T ss_pred CCeEEEEeCCccChh
Confidence 456889999999765
No 285
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=31.55 E-value=1.2e+02 Score=25.28 Aligned_cols=47 Identities=13% Similarity=0.001 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHhcCCc---cEEEEEeCcchHHHHHHHHhCCCccceEEEe
Q 023683 90 DEVGRVLGQVIDTFNLA---PVHLVLHDSALPMSANWVAENPGSVKSLTLL 137 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~---~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~ 137 (279)
+.+..-+..++++++++ .+-=||..||+.. +.+|.++-.+|-++.+-
T Consensus 55 eAQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvTlS 104 (283)
T COG2230 55 EAQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVTLS 104 (283)
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEeeCC
Confidence 34556667778888875 3666899999876 55566776777777643
No 286
>TIGR00959 ffh signal recognition particle protein. This model represents Ffh (Fifty-Four Homolog), the protein component that forms the bacterial (and organellar) signal recognition particle together with a 4.5S RNA. Ffh is a GTPase homologous to eukaryotic SRP54 and also to the GTPase FtsY (TIGR00064) that is the receptor for the signal recognition particle.
Probab=31.38 E-value=2e+02 Score=25.64 Aligned_cols=18 Identities=33% Similarity=0.458 Sum_probs=13.8
Q ss_pred hcCccEEEecCCCCCCCC
Q 023683 7 SKKFNVIAVDLPGNGFSD 24 (279)
Q Consensus 7 ~~G~~vi~~D~~G~G~S~ 24 (279)
..+|+++.+|-+|....+
T Consensus 180 ~~~~DvVIIDTaGr~~~d 197 (428)
T TIGR00959 180 ENGFDVVIVDTAGRLQID 197 (428)
T ss_pred hcCCCEEEEeCCCccccC
Confidence 456899999999976543
No 287
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=31.34 E-value=49 Score=27.82 Aligned_cols=31 Identities=10% Similarity=-0.037 Sum_probs=23.2
Q ss_pred HhcCCccEEEEEeCcchHHHHHHHHhCCCcc
Q 023683 101 DTFNLAPVHLVLHDSALPMSANWVAENPGSV 131 (279)
Q Consensus 101 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v 131 (279)
...++.+-++.|-|.|+.+|..++....+.+
T Consensus 92 ~e~~l~~~~i~GtSaGAi~aa~~~~~~~~El 122 (298)
T cd07206 92 WEQDLLPRVISGSSAGAIVAALLGTHTDEEL 122 (298)
T ss_pred HHcCCCCCEEEEEcHHHHHHHHHHcCCcHHH
Confidence 3456667789999999999999987544333
No 288
>PF00091 Tubulin: Tubulin/FtsZ family, GTPase domain; InterPro: IPR003008 This domain is found in all tubulin chains, as well as the bacterial FtsZ family of proteins. These proteins are involved in polymer formation. Tubulin is the major component of microtubules, while FtsZ is the polymer-forming protein of bacterial cell division, it is part of a ring in the middle of the dividing cell that is required for constriction of cell membrane and cell envelope to yield two daughter cells. FtsZ and tubulin are GTPases, this entry is the GTPase domain. FtsZ can polymerise into tubes, sheets, and rings in vitro and is ubiquitous in bacteria and archaea.; GO: 0051258 protein polymerization, 0043234 protein complex; PDB: 3E22_B 1SA1_D 3DU7_B 2P4N_B 3DCO_B 1Z2B_D 1SA0_B 2XRP_C 1TVK_B 2BTQ_B ....
Probab=31.23 E-value=1.9e+02 Score=22.84 Aligned_cols=33 Identities=9% Similarity=0.110 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHHHH
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSA 121 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~ 121 (279)
.++..+.|...++..+.-..+++-||+||..+.
T Consensus 107 ~~~~~~~ir~~~e~~d~~~~~~i~~slgGGTGS 139 (216)
T PF00091_consen 107 LEEILEQIRKEIEKCDSLDGFFIVHSLGGGTGS 139 (216)
T ss_dssp HHHHHHHHHHHHHTSTTESEEEEEEESSSSHHH
T ss_pred ccccccccchhhccccccccceecccccceecc
Confidence 344455555555555656788999999987433
No 289
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=31.00 E-value=58 Score=27.58 Aligned_cols=22 Identities=9% Similarity=-0.026 Sum_probs=18.7
Q ss_pred CCccEEEEEeCcchHHHHHHHH
Q 023683 104 NLAPVHLVLHDSALPMSANWVA 125 (279)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~a~ 125 (279)
+..+..+.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4778899999999998887764
No 290
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=30.64 E-value=95 Score=26.18 Aligned_cols=43 Identities=14% Similarity=0.182 Sum_probs=31.7
Q ss_pred ccEEEEEeCcchHHHHHHHHhCC----------------CccceEEEeeCCCCCcchhh
Q 023683 106 APVHLVLHDSALPMSANWVAENP----------------GSVKSLTLLDTGIKPALPLF 148 (279)
Q Consensus 106 ~~~~lvGhS~Gg~ia~~~a~~~p----------------~~v~~lvl~~~~~~~~~~~~ 148 (279)
.+++|+|.|-|+.|.-.+..... .+|+.+-.++++.......|
T Consensus 193 ~~~~LiGFSKGcvVLNqll~El~~~~~~~~~~~~~~~~l~~I~~~~wLD~Gh~g~~~~w 251 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYELHYLEELARVDKEIERFLSRISDMYWLDGGHNGGSNTW 251 (303)
T ss_pred CceEEEEecCcchHHHHHHHHHHhhhcccCCchHHHHHHHhhheEEEeccCCCCCCCce
Confidence 47999999999999877665433 25788888888876555555
No 291
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=30.56 E-value=43 Score=27.56 Aligned_cols=43 Identities=12% Similarity=0.207 Sum_probs=32.5
Q ss_pred HHHHHHHHHhcCCccEE-EEEeCcchHHHHHHHHhCCCccceEEE
Q 023683 93 GRVLGQVIDTFNLAPVH-LVLHDSALPMSANWVAENPGSVKSLTL 136 (279)
Q Consensus 93 ~~~l~~~l~~l~~~~~~-lvGhS~Gg~ia~~~a~~~p~~v~~lvl 136 (279)
|..|.++++... .+++ ++|-|+|+.-+..|.++.+.+-+++++
T Consensus 27 AGVLD~fl~a~~-~~f~~~~GvSAGA~n~~aYls~Q~gra~~~~~ 70 (292)
T COG4667 27 AGVLDEFLRANF-NPFDLVVGVSAGALNLVAYLSKQRGRARRVIV 70 (292)
T ss_pred HHHHHHHHHhcc-CCcCeeeeecHhHHhHHHHhhcCCchHHHHHH
Confidence 666777775544 3444 779999999999999998887666554
No 292
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=30.50 E-value=83 Score=22.26 Aligned_cols=31 Identities=13% Similarity=0.169 Sum_probs=23.8
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeCcchHHHH
Q 023683 91 EVGRVLGQVIDTFNLAPVHLVLHDSALPMSA 121 (279)
Q Consensus 91 ~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~ 121 (279)
.....+.-.+..++.+.++++||+--|++..
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~a 74 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVKA 74 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHHH
Confidence 3566677777889999999999976665554
No 293
>PF03283 PAE: Pectinacetylesterase
Probab=30.16 E-value=1.2e+02 Score=26.25 Aligned_cols=48 Identities=23% Similarity=0.171 Sum_probs=30.6
Q ss_pred HHHHHHHh-cC-CccEEEEEeCcchHHHHHHH----HhCCCccceEEEeeCCCC
Q 023683 95 VLGQVIDT-FN-LAPVHLVLHDSALPMSANWV----AENPGSVKSLTLLDTGIK 142 (279)
Q Consensus 95 ~l~~~l~~-l~-~~~~~lvGhS~Gg~ia~~~a----~~~p~~v~~lvl~~~~~~ 142 (279)
.|..++.. ++ .++++|-|.|-||.-++..+ ...|..++-.++.+++..
T Consensus 143 vl~~l~~~gl~~a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~~DsG~f 196 (361)
T PF03283_consen 143 VLDDLLSNGLPNAKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCLSDSGFF 196 (361)
T ss_pred HHHHHHHhcCcccceEEEeccChHHHHHHHHHHHHHHHhccCceEEEecccccc
Confidence 33344444 33 36899999999999887655 356765555566666543
No 294
>cd08770 DAP_dppA_3 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=30.11 E-value=1.6e+02 Score=24.35 Aligned_cols=51 Identities=10% Similarity=0.066 Sum_probs=34.2
Q ss_pred ccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-c-CCCCCCCcchHHHHHHHhh
Q 023683 221 IKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-S-GGRWPQTSRGRAHTRAYTE 277 (279)
Q Consensus 221 ~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~-~gH~~~~e~p~~~~~~i~~ 277 (279)
...+||.++.|+ +... ++..+.+|+++.+.+ . -|.....-.|++..+.|.+
T Consensus 145 ~~gVPV~lvsGD---~~~~---~ea~~~~P~~~tv~vK~~~g~aa~~~~p~~a~~~I~~ 197 (263)
T cd08770 145 YLGVPVVFVSGD---AGLC---AEAKELNPNIVTVPVKEGFGGATISIHPGLACKEIRK 197 (263)
T ss_pred hcCCCEEEEecC---HHHH---HHHHHhCCCceEEEeeeeeccccccCCHHHHHHHHHH
Confidence 357999999998 4333 334555799988887 4 3544444567777777654
No 295
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=30.10 E-value=1.1e+02 Score=25.48 Aligned_cols=38 Identities=5% Similarity=-0.068 Sum_probs=25.7
Q ss_pred hHHHHHHHHH-HHHhcC-CccEEEEEeCcchHHHHHHHHh
Q 023683 89 SDEVGRVLGQ-VIDTFN-LAPVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 89 ~~~~~~~l~~-~l~~l~-~~~~~lvGhS~Gg~ia~~~a~~ 126 (279)
+++-+..... +.+.+. .+++.++|.|-|+..|-.+|..
T Consensus 73 ~~~~I~~ay~~l~~~~~~gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 73 IEARIRDAYRFLSKNYEPGDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred hHHHHHHHHHHHHhccCCcceEEEEecCccHHHHHHHHHH
Confidence 4444443333 334433 4679999999999999999854
No 296
>cd06533 Glyco_transf_WecG_TagA The glycosyltransferase WecG/TagA superfamily contains Escherichia coli WecG, Bacillus subtilis TagA and related proteins. E. coli WecG is believed to be a UDP-N-acetyl-D-mannosaminuronic acid transferase, and is involved in enterobacterial common antigen (eca) synthesis. B. subtilis TagA plays a key role in the Wall Teichoic Acid (WTA) biosynthetic pathway, catalyzing the transfer of N-acetylmannosamine to the C4 hydroxyl of a membrane-anchored N-acetylglucosaminyl diphospholipid to make ManNAc-beta-(1,4)-GlcNAc-pp-undecaprenyl. This is the first committed step in this pathway. Also included in this group is Xanthomonas campestris pv. campestris GumM, a glycosyltransferase participating in the biosynthesis of the exopolysaccharide xanthan.
Probab=28.60 E-value=1.2e+02 Score=23.07 Aligned_cols=51 Identities=16% Similarity=0.243 Sum_probs=32.5
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEecCCCCCCCcchHHHHHHHh
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRWPQTSRGRAHTRAYT 276 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~ 276 (279)
..++.++.++ .....+..+.+.+..|+.+++....|.+-..+.++ +.+.|.
T Consensus 46 ~~~v~llG~~--~~~~~~~~~~l~~~yp~l~i~g~~~g~~~~~~~~~-i~~~I~ 96 (171)
T cd06533 46 GLRVFLLGAK--PEVLEKAAERLRARYPGLKIVGYHHGYFGPEEEEE-IIERIN 96 (171)
T ss_pred CCeEEEECCC--HHHHHHHHHHHHHHCCCcEEEEecCCCCChhhHHH-HHHHHH
Confidence 4677777666 45455677788999999987765445554444444 444443
No 297
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=28.41 E-value=2.7e+02 Score=24.97 Aligned_cols=48 Identities=15% Similarity=0.106 Sum_probs=35.6
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCc--cceEEEe
Q 023683 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGS--VKSLTLL 137 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~--v~~lvl~ 137 (279)
+++.+.+.++-+.+.-+.+.+|--+|=|.-|...|..+.+. +.++|+.
T Consensus 198 e~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 198 EELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 34566666676777777888888888888888888776653 6777774
No 298
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=28.29 E-value=74 Score=25.86 Aligned_cols=20 Identities=5% Similarity=0.066 Sum_probs=17.6
Q ss_pred EEEEeCcchHHHHHHHHhCC
Q 023683 109 HLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 109 ~lvGhS~Gg~ia~~~a~~~p 128 (279)
.+.|-|.|+.++..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 39999999999999998654
No 299
>PLN00021 chlorophyllase
Probab=27.75 E-value=1.1e+02 Score=26.01 Aligned_cols=47 Identities=9% Similarity=-0.007 Sum_probs=29.6
Q ss_pred cCCCEEEEeeCCCC---------cccc-hhHHHHHhhC-CCCcEEEe-cCCCCCCCcch
Q 023683 222 KGIPMQILWSSVWS---------KEWS-EEGSRVADAL-PQAKFVGH-SGGRWPQTSRG 268 (279)
Q Consensus 222 ~~~Pvlii~G~~d~---------~~~~-~~~~~~~~~~-~~~~~~~i-~~gH~~~~e~p 268 (279)
+.+|+++|.+..+. ..+. .....+.+.+ +.+...++ ++||+-++|..
T Consensus 188 ~~~P~liig~g~~~~~~~~~~p~~ap~~~~~~~f~~~~~~~~~~~~~~~~gH~~~~~~~ 246 (313)
T PLN00021 188 LDIPVLVIGTGLGGEPRNPLFPPCAPDGVNHAEFFNECKAPAVHFVAKDYGHMDMLDDD 246 (313)
T ss_pred CCCCeEEEecCCCcccccccccccCCCCCCHHHHHHhcCCCeeeeeecCCCcceeecCC
Confidence 67999999998532 0112 3335555555 34555556 79999887654
No 300
>TIGR00090 iojap_ybeB iojap-like ribosome-associated protein. This model describes a widely distributed family of bacterial proteins related to iojap from plants. It includes YbeB from E. coli. The gene iojap is a pattern-striping gene in maize, reflecting a chloroplast development defect in some cells. More recent work in bacteria suggests that the bacterial iojap-related protein physically associates with ribosomes. The function remains unknown.
Probab=27.19 E-value=57 Score=22.29 Aligned_cols=25 Identities=8% Similarity=0.108 Sum_probs=17.9
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEe
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLH 113 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGh 113 (279)
...+++.+...++..+..+..+-|.
T Consensus 43 ~~aia~~v~~~~k~~~~~~~~~EG~ 67 (99)
T TIGR00090 43 VKAIADNVEEELKEAGLKPLGVEGL 67 (99)
T ss_pred HHHHHHHHHHHHHHcCCCcccccCC
Confidence 6677888888888777666655554
No 301
>PRK04148 hypothetical protein; Provisional
Probab=27.16 E-value=1.4e+02 Score=21.79 Aligned_cols=46 Identities=2% Similarity=-0.017 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 91 EVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 91 ~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
++++.+.+.+......++..||--.|..+|..++.. . ..++.++-.
T Consensus 3 ~i~~~l~~~~~~~~~~kileIG~GfG~~vA~~L~~~-G---~~ViaIDi~ 48 (134)
T PRK04148 3 TIAEFIAENYEKGKNKKIVELGIGFYFKVAKKLKES-G---FDVIVIDIN 48 (134)
T ss_pred HHHHHHHHhcccccCCEEEEEEecCCHHHHHHHHHC-C---CEEEEEECC
Confidence 345555544433333579999999888888888743 2 356666543
No 302
>cd08663 DAP_dppA_1 Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacteriz
Probab=27.14 E-value=2.1e+02 Score=23.74 Aligned_cols=51 Identities=12% Similarity=0.053 Sum_probs=34.2
Q ss_pred ccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-c-CC-CCCCCcchHHHHHHHhh
Q 023683 221 IKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-S-GG-RWPQTSRGRAHTRAYTE 277 (279)
Q Consensus 221 ~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~-~g-H~~~~e~p~~~~~~i~~ 277 (279)
...+||.++.|+ +...+ +..+..|+++.+.+ . -| +..-.-.|++..+.|.+
T Consensus 145 ~~gVPV~lVsGD---d~~~~---ea~~~~p~i~tv~vK~~~gr~aa~~~~p~~a~~~I~~ 198 (266)
T cd08663 145 EYGVPVVLVTGD---DAACA---EARELGPGVETVAVKEAIGRFAARCLPPAEARALIRE 198 (266)
T ss_pred hcCCCEEEEecC---HHHHH---HHHhhCCCcEEEEEecccCCCccccCCHHHHHHHHHH
Confidence 357999999998 43333 33446799998888 4 35 44445567777776653
No 303
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=26.89 E-value=56 Score=36.26 Aligned_cols=29 Identities=3% Similarity=-0.213 Sum_probs=23.7
Q ss_pred HHHHHHhcCCccEEEEEeCcchHHHHHHH
Q 023683 96 LGQVIDTFNLAPVHLVLHDSALPMSANWV 124 (279)
Q Consensus 96 l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 124 (279)
+..++..+|+.+-.++|||+|=+.|+..|
T Consensus 664 l~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 664 QYKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 34556788999999999999998887655
No 304
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=26.64 E-value=86 Score=23.27 Aligned_cols=30 Identities=17% Similarity=0.048 Sum_probs=21.0
Q ss_pred HHHHHHHHhcCC--ccEEEEEeCcchHHHHHHH
Q 023683 94 RVLGQVIDTFNL--APVHLVLHDSALPMSANWV 124 (279)
Q Consensus 94 ~~l~~~l~~l~~--~~~~lvGhS~Gg~ia~~~a 124 (279)
-.+..+ .+.++ ..-.+.|.|.|+.++..++
T Consensus 15 gvl~~l-~~~~~~~~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 15 GVLSAL-AERGLLDCVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred HHHHHH-HHhCCccCCCEEEEEcHHHHHHHHHh
Confidence 333433 33444 5567889999999999998
No 305
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=26.60 E-value=3.7e+02 Score=22.26 Aligned_cols=42 Identities=2% Similarity=-0.043 Sum_probs=23.6
Q ss_pred HHHHHHhcCCccEEEE-EeCcchHHHHHHHHhC-CCccceEEEe
Q 023683 96 LGQVIDTFNLAPVHLV-LHDSALPMSANWVAEN-PGSVKSLTLL 137 (279)
Q Consensus 96 l~~~l~~l~~~~~~lv-GhS~Gg~ia~~~a~~~-p~~v~~lvl~ 137 (279)
+.++++......++|| .-++++.-+...+.++ +-.+.++|+.
T Consensus 176 l~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~T 219 (270)
T PRK06731 176 MIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVFT 219 (270)
T ss_pred HHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEEE
Confidence 3334444333345554 4567777777777664 3457777764
No 306
>cd00281 DAP_dppA Peptidase M55, D-aminopeptidase dipeptide-binding protein family. M55 Peptidase, D-Aminopeptidase dipeptide-binding protein (dppA; DAP dppA; EC 3.4.11.-) domain: Peptide transport systems are found in many bacterial species and generally function to accumulate intact peptides in the cell, where they are hydrolyzed. The dipeptide-binding protein (dppA) of Bacillus subtilis belongs to the dipeptide ABC transport (dpp) operon expressed early during sporulation. It is a binuclear zinc-dependent, D-specific aminopeptidase. The biologically active enzyme is a homodecamer with active sites buried in its channel. These self-compartmentalizing proteases are characterized by a SXDXEG motif. D-Ala-D-Ala and D-Ala-Gly-Gly are the preferred substrates. Bacillus subtilis dppA is thought to function as an adaptation to nutrient deficiency; hydrolysis of its substrate releases D-Ala which can be used subsequently as metabolic fuel. This family also contains a number of uncharacterized
Probab=26.56 E-value=2.2e+02 Score=23.60 Aligned_cols=51 Identities=20% Similarity=0.216 Sum_probs=33.6
Q ss_pred ccCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-c-CCCCC-CCcchHHHHHHHhh
Q 023683 221 IKGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-S-GGRWP-QTSRGRAHTRAYTE 277 (279)
Q Consensus 221 ~~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~-~gH~~-~~e~p~~~~~~i~~ 277 (279)
...+||.++.|+ +... +...+.+|+++.+.+ . -|++. -.-.|++..+.|.+
T Consensus 144 ~~gVPV~lvsGD---d~~~---~ea~~~~P~~~tv~vK~~~gr~aa~~~~p~~a~~~I~~ 197 (265)
T cd00281 144 YYGVPVVMVAGD---AEVC---KEAKAYDAQVETVVTKKGMGRFSVKAPSPQKVLRAIRE 197 (265)
T ss_pred hcCCCEEEEecC---HHHH---HHHHHhCCCceEEEEeeeeCCCccccCCHHHHHHHHHH
Confidence 357999999998 4333 334555799998888 4 46544 34456766666653
No 307
>PRK08671 methionine aminopeptidase; Provisional
Probab=26.23 E-value=57 Score=27.27 Aligned_cols=32 Identities=25% Similarity=0.534 Sum_probs=27.5
Q ss_pred ccChHHHHHHHHHHHHhcCCccE-EEEEeCcch
Q 023683 86 ELGSDEVGRVLGQVIDTFNLAPV-HLVLHDSAL 117 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~~~~~-~lvGhS~Gg 117 (279)
+.+..++.+.+.++++..+..++ ++.||++|=
T Consensus 124 G~~~~dv~~~i~~vi~~~G~~~~~~~~GHgiG~ 156 (291)
T PRK08671 124 GVSVGEIGRVIEETIRSYGFKPIRNLTGHGLER 156 (291)
T ss_pred CCCHHHHHHHHHHHHHHcCCcccCCCcccCcCC
Confidence 67889999999999999988764 689999994
No 308
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=26.13 E-value=91 Score=25.50 Aligned_cols=35 Identities=6% Similarity=-0.038 Sum_probs=24.3
Q ss_pred HHHHHHHHHhcCCc----cEEEEEeCcchHHHHHHHHhCC
Q 023683 93 GRVLGQVIDTFNLA----PVHLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 93 ~~~l~~~l~~l~~~----~~~lvGhS~Gg~ia~~~a~~~p 128 (279)
+-.+..+.++ +.+ .-.++|-|.|+.++..++...+
T Consensus 16 ~GVl~aL~e~-~~~l~~~~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 16 VGVTRCLSER-APHLLRDARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred HHHHHHHHHh-CcchhccCCEEEEEcHHHHHHHHHHhCCC
Confidence 4444444444 332 3469999999999999998655
No 309
>PF06858 NOG1: Nucleolar GTP-binding protein 1 (NOG1); InterPro: IPR010674 This domain represents a conserved region of approximately 60 residues in length within nucleolar GTP-binding protein 1 (NOG1). The NOG1 family includes eukaryotic, bacterial and archaeal proteins. In Saccharomyces cerevisiae, the NOG1 gene has been shown to be essential for cell viability, suggesting that NOG1 may play an important role in nucleolar functions. In particular, NOG1 is believed to be functionally linked to ribosome biogenesis, which occurs in the nucleolus. In eukaryotes, NOG1 mutants were found to disrupt the biogenesis of the 60S ribosomal subunit []. The DRG and OBG proteins as well as the prokaryotic NOG-like proteins are homologous throughout their length to the amino half of eukaryotic NOG1, which contains the GTP binding motifs (IPR006073 from INTERPRO); the N-terminal GTP-binding motif is required for function.; GO: 0005525 GTP binding; PDB: 2E87_A.
Probab=25.76 E-value=1.7e+02 Score=17.91 Aligned_cols=26 Identities=19% Similarity=0.234 Sum_probs=19.6
Q ss_pred ccChHHHHHHHHHHHHhcCCccEEEE
Q 023683 86 ELGSDEVGRVLGQVIDTFNLAPVHLV 111 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~~~~~~lv 111 (279)
+|+++++.....++...++-.|+++|
T Consensus 28 Gysie~Q~~L~~~ik~~F~~~P~i~V 53 (58)
T PF06858_consen 28 GYSIEEQLSLFKEIKPLFPNKPVIVV 53 (58)
T ss_dssp SS-HHHHHHHHHHHHHHTTTS-EEEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 69999999999999888865666554
No 310
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=25.54 E-value=2e+02 Score=22.79 Aligned_cols=19 Identities=26% Similarity=0.218 Sum_probs=15.2
Q ss_pred hhhhhhcCccEEEecCCCC
Q 023683 2 INSLRSKKFNVIAVDLPGN 20 (279)
Q Consensus 2 ~~~l~~~G~~vi~~D~~G~ 20 (279)
...|+++|++|++.|+.--
T Consensus 31 a~~la~~Garv~v~dl~~~ 49 (256)
T KOG1200|consen 31 AQLLAKKGARVAVADLDSA 49 (256)
T ss_pred HHHHHhcCcEEEEeecchh
Confidence 3568899999999998643
No 311
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=25.50 E-value=95 Score=25.35 Aligned_cols=22 Identities=5% Similarity=-0.118 Sum_probs=18.5
Q ss_pred cEEEEEeCcchHHHHHHHHhCC
Q 023683 107 PVHLVLHDSALPMSANWVAENP 128 (279)
Q Consensus 107 ~~~lvGhS~Gg~ia~~~a~~~p 128 (279)
.-.++|-|.|+.++..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3558999999999999998654
No 312
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=25.23 E-value=98 Score=22.68 Aligned_cols=30 Identities=10% Similarity=0.087 Sum_probs=22.7
Q ss_pred HHHHHHHHHHHhcCCccEEEEEeCcchHHH
Q 023683 91 EVGRVLGQVIDTFNLAPVHLVLHDSALPMS 120 (279)
Q Consensus 91 ~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia 120 (279)
+....+.-.+..++.+.++++||+-=|++.
T Consensus 41 ~~~~sl~~av~~l~~~~IiV~gHt~Cg~~~ 70 (142)
T cd03379 41 DAIRSLVVSVYLLGTREIIVIHHTDCGMLT 70 (142)
T ss_pred hHHHHHHHHHHHhCCCEEEEEeecCCcceE
Confidence 455667777788999999999998555443
No 313
>PF15566 Imm18: Immunity protein 18
Probab=25.16 E-value=1.1e+02 Score=18.11 Aligned_cols=31 Identities=13% Similarity=0.019 Sum_probs=25.7
Q ss_pred hHHHHHHHHHHHHhcCCccEEEEEeCcchHH
Q 023683 89 SDEVGRVLGQVIDTFNLAPVHLVLHDSALPM 119 (279)
Q Consensus 89 ~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~i 119 (279)
+.-+++.|..+..+..-+.++++--||||.-
T Consensus 4 L~~L~~~l~~L~~~~~~~H~Hlmtp~WgG~E 34 (52)
T PF15566_consen 4 LELLQDQLENLQEKEPFDHEHLMTPDWGGEE 34 (52)
T ss_pred HHHHHHHHHHHHhccCCCCceeccccccccc
Confidence 6667888888888776678999999999964
No 314
>cd01088 MetAP2 Methionine Aminopeptidase 2. E.C. 3.4.11.18. Also known as methionyl aminopeptidase and peptidase M. Catalyzes release of N-terminal amino acids, preferentially methionine, from peptides and arylamides.
Probab=25.13 E-value=62 Score=27.04 Aligned_cols=32 Identities=22% Similarity=0.539 Sum_probs=27.6
Q ss_pred ccChHHHHHHHHHHHHhcCCccE-EEEEeCcch
Q 023683 86 ELGSDEVGRVLGQVIDTFNLAPV-HLVLHDSAL 117 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~~~~~-~lvGhS~Gg 117 (279)
+.+..++.+.+.++++..|..++ ++.|||+|-
T Consensus 123 G~~~~dV~~ai~~~i~~~G~~~~~~~~GHgig~ 155 (291)
T cd01088 123 DVRLGEIGEAIEEVIESYGFKPIRNLTGHSIER 155 (291)
T ss_pred CCcHHHHHHHHHHHHHHcCCEEeecCCccCccC
Confidence 67889999999999999998764 688999994
No 315
>PRK12724 flagellar biosynthesis regulator FlhF; Provisional
Probab=24.68 E-value=4.2e+02 Score=23.75 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=12.8
Q ss_pred hhhcCccEEEecCCCCCC
Q 023683 5 LRSKKFNVIAVDLPGNGF 22 (279)
Q Consensus 5 l~~~G~~vi~~D~~G~G~ 22 (279)
+.+++|+++.+|-+|+..
T Consensus 295 l~~~~~D~VLIDTaGr~~ 312 (432)
T PRK12724 295 LARDGSELILIDTAGYSH 312 (432)
T ss_pred HHhCCCCEEEEeCCCCCc
Confidence 344578999999976543
No 316
>PF04951 Peptidase_M55: D-aminopeptidase; InterPro: IPR007035 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of metallopeptidases belong to MEROPS peptidase family M55 (DppA aminopeptidase family, clan MN). The type example is Bacillus subtilis DppA, which is a binuclear zinc-dependent, D-specific aminopeptidase. The structure reveals that DppA is a new example of a self-compartmentalising protease, a family of proteolytic complexes. Proteasomes are the most extensively studied representatives of this family. The DppA enzyme is composed of identical 30 kDa subunits organised in a decamer with 52 point-group symmetry. A 20 A wide channel runs through the complex, giving access to a central chamber holding the active sites. The structure shows DppA to be a prototype of a new family of metalloaminopeptidases characterised by the SXDXEG key sequence []. The only known substrates are D-ala-D-ala and D-ala-gly-gly.; PDB: 1HI9_A.
Probab=24.40 E-value=94 Score=25.68 Aligned_cols=50 Identities=14% Similarity=0.128 Sum_probs=31.7
Q ss_pred cCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-c--CCCCCCCcchHHHHHHHhh
Q 023683 222 KGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-S--GGRWPQTSRGRAHTRAYTE 277 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~--~gH~~~~e~p~~~~~~i~~ 277 (279)
..+||.++.|+ +. ..++..+.+|+.+.+.+ . +.+....-.|++..+.|.+
T Consensus 146 ~GVPV~lVsGD---~~---l~~ea~~~~P~~~tv~vK~~~gr~aA~~~~p~~a~~~i~~ 198 (265)
T PF04951_consen 146 YGVPVVLVSGD---DA---LCEEAKELLPWIVTVAVKEGIGRYAAISLHPAEACERIRE 198 (265)
T ss_dssp TT--EEEEEEE---HH---HHHHHHTTSTT-EEEEEEEEEETTEEEE--HHHHHHHHHH
T ss_pred cCCcEEEEeCc---HH---HHHHHHHhCCCceEEEEecccCCCccccCCHHHHHHHHHH
Confidence 57999999998 32 34566778898888777 4 4555566677877777653
No 317
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=24.00 E-value=96 Score=25.18 Aligned_cols=21 Identities=10% Similarity=0.104 Sum_probs=17.3
Q ss_pred EEEEeCcchHHHHHHHHhCCCc
Q 023683 109 HLVLHDSALPMSANWVAENPGS 130 (279)
Q Consensus 109 ~lvGhS~Gg~ia~~~a~~~p~~ 130 (279)
.++|-|.|+.++..++. .|++
T Consensus 34 ~i~GtSaGAl~aa~~a~-~~~~ 54 (246)
T cd07222 34 RFAGASAGSLVAAVLLT-APEK 54 (246)
T ss_pred EEEEECHHHHHHHHHhc-ChHH
Confidence 79999999999999984 3443
No 318
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=23.69 E-value=67 Score=27.50 Aligned_cols=18 Identities=0% Similarity=-0.335 Sum_probs=14.5
Q ss_pred EEEEEeCcchHHHHHHHH
Q 023683 108 VHLVLHDSALPMSANWVA 125 (279)
Q Consensus 108 ~~lvGhS~Gg~ia~~~a~ 125 (279)
-.++|||+|=+.|+..+.
T Consensus 126 ~~~~GHSlGE~aA~~~AG 143 (343)
T PLN02752 126 DVCAGLSLGEYTALVFAG 143 (343)
T ss_pred CeeeeccHHHHHHHHHhC
Confidence 357999999988887764
No 319
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=23.49 E-value=1e+02 Score=18.06 Aligned_cols=27 Identities=7% Similarity=-0.007 Sum_probs=23.6
Q ss_pred ccChHHHHHHHHHHHHhcCCccEEEEE
Q 023683 86 ELGSDEVGRVLGQVIDTFNLAPVHLVL 112 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~~~~~~lvG 112 (279)
.++.+.+..|+...+..+.+..+.++|
T Consensus 5 ~w~PqSWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 5 AWHPQSWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred ccCcHHHHHHHHHHHhcceeeeEEecc
Confidence 467888999999999999998988887
No 320
>PF03808 Glyco_tran_WecB: Glycosyl transferase WecB/TagA/CpsF family; InterPro: IPR004629 The WecG member of this superfamily, believed to be UDP-N-acetyl-D-mannosaminuronic acid transferase, plays a role in Enterobacterial common antigen (eca) synthesis in Escherichia coli. Another family member, the Bacillus subtilis TagA protein, is involved in the biosynthesis of the cell wall polymer poly(glycerol phosphate). The third family member, CpsF, CMP-N-acetylneuraminic acid synthetase has a role in the capsular polysaccharide biosynthesis pathway.; GO: 0009058 biosynthetic process
Probab=23.22 E-value=2e+02 Score=21.84 Aligned_cols=38 Identities=18% Similarity=0.309 Sum_probs=26.2
Q ss_pred CCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEecCCCC
Q 023683 223 GIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGHSGGRW 262 (279)
Q Consensus 223 ~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i~~gH~ 262 (279)
..++.++.|+ .....+....+.+..|+.+++-...|.+
T Consensus 48 ~~~ifllG~~--~~~~~~~~~~l~~~yP~l~ivg~~~g~f 85 (172)
T PF03808_consen 48 GKRIFLLGGS--EEVLEKAAANLRRRYPGLRIVGYHHGYF 85 (172)
T ss_pred CCeEEEEeCC--HHHHHHHHHHHHHHCCCeEEEEecCCCC
Confidence 4567777776 3444477788888999888776654544
No 321
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=22.98 E-value=2.4e+02 Score=20.73 Aligned_cols=35 Identities=11% Similarity=0.061 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHH
Q 023683 90 DEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWV 124 (279)
Q Consensus 90 ~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 124 (279)
......+.-.+..++.+.++++|||-=|++...+.
T Consensus 39 ~~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~~ 73 (153)
T PF00484_consen 39 DSALASLEYAVYHLGVKEIIVCGHTDCGAIKAALD 73 (153)
T ss_dssp HHHHHHHHHHHHTST-SEEEEEEETT-HHHHHHHH
T ss_pred cchhhheeeeeecCCCCEEEEEcCCCchHHHHHHh
Confidence 45566677778899999999999998888775444
No 322
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=22.98 E-value=80 Score=27.92 Aligned_cols=55 Identities=15% Similarity=0.210 Sum_probs=37.0
Q ss_pred cCCCEEEEeeCCCCcccchhHHHHHhhCCCCcEEEe-cCCCCCCCc-----chHHHHHHHhhc
Q 023683 222 KGIPMQILWSSVWSKEWSEEGSRVADALPQAKFVGH-SGGRWPQTS-----RGRAHTRAYTED 278 (279)
Q Consensus 222 ~~~Pvlii~G~~d~~~~~~~~~~~~~~~~~~~~~~i-~~gH~~~~e-----~p~~~~~~i~~f 278 (279)
..-.+++|+|+ .|+|....-.+.+...+..+.+. ++.|...+. +-++....|.+|
T Consensus 350 ~~~rmlFVYG~--nDPW~A~~f~l~~g~~ds~v~~~PggnHga~I~~L~~~~r~~a~a~l~~W 410 (448)
T PF05576_consen 350 NGPRMLFVYGE--NDPWSAEPFRLGKGKRDSYVFTAPGGNHGARIAGLPEAERAEATARLRRW 410 (448)
T ss_pred CCCeEEEEeCC--CCCcccCccccCCCCcceEEEEcCCCcccccccCCCHHHHHHHHHHHHHH
Confidence 45679999999 68998777776655555666666 578875443 234455566655
No 323
>PF06289 FlbD: Flagellar protein (FlbD); InterPro: IPR009384 This family consists of several bacterial FlbD flagellar proteins. The exact function of this family is unknown [].
Probab=22.39 E-value=73 Score=19.60 Aligned_cols=32 Identities=9% Similarity=0.097 Sum_probs=23.9
Q ss_pred hhCCCCcEEEecCCCCCCCcchHHHHHHHhhc
Q 023683 247 DALPQAKFVGHSGGRWPQTSRGRAHTRAYTED 278 (279)
Q Consensus 247 ~~~~~~~~~~i~~gH~~~~e~p~~~~~~i~~f 278 (279)
+..|+..+...+|-++.-.|.++++.+.+.+|
T Consensus 23 e~~PDTvItL~~G~k~vV~Es~~eVi~ki~~y 54 (60)
T PF06289_consen 23 EETPDTVITLTNGKKYVVKESVEEVIEKIIEY 54 (60)
T ss_pred EEcCCeEEEEeCCCEEEEECCHHHHHHHHHHH
Confidence 34576555444888888899999999988776
No 324
>PRK10867 signal recognition particle protein; Provisional
Probab=22.34 E-value=4.1e+02 Score=23.84 Aligned_cols=17 Identities=24% Similarity=0.405 Sum_probs=13.4
Q ss_pred hcCccEEEecCCCCCCC
Q 023683 7 SKKFNVIAVDLPGNGFS 23 (279)
Q Consensus 7 ~~G~~vi~~D~~G~G~S 23 (279)
..+|+++.+|-+|....
T Consensus 181 ~~~~DvVIIDTaGrl~~ 197 (433)
T PRK10867 181 ENGYDVVIVDTAGRLHI 197 (433)
T ss_pred hcCCCEEEEeCCCCccc
Confidence 45689999999997654
No 325
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=22.28 E-value=2.2e+02 Score=24.34 Aligned_cols=47 Identities=15% Similarity=0.172 Sum_probs=32.3
Q ss_pred HHHHHHHHhcCCccEEEEEeCcch--HHHHHHHHhCCCccceEEEeeCC
Q 023683 94 RVLGQVIDTFNLAPVHLVLHDSAL--PMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 94 ~~l~~~l~~l~~~~~~lvGhS~Gg--~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
..+..++..+...+++|||-|-== -|=.+++..+|++|.++.+=+..
T Consensus 266 ~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 266 QSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred cHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 445556777887899999977321 23345567899999888776555
No 326
>PLN03006 carbonate dehydratase
Probab=22.10 E-value=1.2e+02 Score=25.46 Aligned_cols=31 Identities=16% Similarity=0.186 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhcCCccEEEEEeCcchHHHHH
Q 023683 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSAN 122 (279)
Q Consensus 92 ~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~ 122 (279)
....|+..+..++++.|+|+|||-=|.+...
T Consensus 158 ~~aSLEYAV~~L~V~~IVV~GHs~CGaV~Aa 188 (301)
T PLN03006 158 TKAALEFSVNTLNVENILVIGHSRCGGIQAL 188 (301)
T ss_pred hhhhHHHHHHHhCCCEEEEecCCCchHHHHH
Confidence 4567777789999999999999987766643
No 327
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=21.87 E-value=1.8e+02 Score=18.91 Aligned_cols=24 Identities=8% Similarity=0.032 Sum_probs=17.7
Q ss_pred CCccEEEEEeCcchHHHHHHHHhC
Q 023683 104 NLAPVHLVLHDSALPMSANWVAEN 127 (279)
Q Consensus 104 ~~~~~~lvGhS~Gg~ia~~~a~~~ 127 (279)
+-+++-++|-|-|=.+|...++.+
T Consensus 38 GpK~VLViGaStGyGLAsRIa~aF 61 (78)
T PF12242_consen 38 GPKKVLVIGASTGYGLASRIAAAF 61 (78)
T ss_dssp S-SEEEEES-SSHHHHHHHHHHHH
T ss_pred CCceEEEEecCCcccHHHHHHHHh
Confidence 346788999999988887777654
No 328
>PLN00179 acyl- [acyl-carrier protein] desaturase
Probab=21.66 E-value=53 Score=28.48 Aligned_cols=47 Identities=9% Similarity=0.215 Sum_probs=40.8
Q ss_pred ccChHHHHHHHHHHHHhcCCccEEEEEeCcchHHHHHHHHhCCCccceE
Q 023683 86 ELGSDEVGRVLGQVIDTFNLAPVHLVLHDSALPMSANWVAENPGSVKSL 134 (279)
Q Consensus 86 ~~~~~~~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~l 134 (279)
-||..++++.+..+++.+++.+. -|-|-=|--|..+.+..|.++.++
T Consensus 316 VYt~~dy~dIl~~lv~~W~v~~l--~gLs~eg~kArd~l~~l~~rirr~ 362 (390)
T PLN00179 316 VYTAKDYADILEHLVRRWKVEEL--TGLSGEGRRAQDYVCGLPPRIRRL 362 (390)
T ss_pred CCCHHHHHHHHHHHHhhcCcCcc--cCCCHHHHHHHHHHHHhHHHHHHH
Confidence 58999999888999999998776 588999999999999988877664
No 329
>PRK10319 N-acetylmuramoyl-l-alanine amidase I; Provisional
Probab=21.59 E-value=2.5e+02 Score=23.51 Aligned_cols=15 Identities=40% Similarity=0.640 Sum_probs=12.4
Q ss_pred ccEEEecCCCCCCCCC
Q 023683 10 FNVIAVDLPGNGFSDR 25 (279)
Q Consensus 10 ~~vi~~D~~G~G~S~~ 25 (279)
-.+|++| ||||..+.
T Consensus 56 ~~~IvID-pGHGG~Dp 70 (287)
T PRK10319 56 KRVVMLD-PGHGGIDT 70 (287)
T ss_pred CeEEEEE-CCCCCCCC
Confidence 4688999 79999876
No 330
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=21.15 E-value=1.2e+02 Score=22.72 Aligned_cols=24 Identities=4% Similarity=-0.251 Sum_probs=18.3
Q ss_pred cCCccEEEEEeCcchHHHHHHHHh
Q 023683 103 FNLAPVHLVLHDSALPMSANWVAE 126 (279)
Q Consensus 103 l~~~~~~lvGhS~Gg~ia~~~a~~ 126 (279)
.+...-.+.|-|.||.+++.++..
T Consensus 24 ~~~~~d~i~GtS~Gal~a~~~~~~ 47 (204)
T PF01734_consen 24 LGERFDVISGTSAGALNAALLALG 47 (204)
T ss_dssp GCCT-SEEEEECCHHHHHHHHHTC
T ss_pred hCCCccEEEEcChhhhhHHHHHhC
Confidence 334456799999999999888865
No 331
>PF00862 Sucrose_synth: Sucrose synthase; InterPro: IPR000368 Sucrose synthases catalyse the synthesis of sucrose 2.4.1.13 from EC in the following reaction: UDP-glucose + D-fructose = UDP + sucrose This family includes the bulk of the sucrose synthase protein. However the carboxyl terminal region of the sucrose synthases belongs to the glycosyl transferase family IPR001296 from INTERPRO. This enzyme is found mainly in plants but also appears in bacteria.; GO: 0005985 sucrose metabolic process; PDB: 2R60_A 2R66_A 2R68_A 3S27_G 3S29_A 3S28_A.
Probab=21.13 E-value=1.5e+02 Score=27.12 Aligned_cols=38 Identities=5% Similarity=0.054 Sum_probs=27.1
Q ss_pred hHHHHHHHHH-HHHhcCCccEEEEEe-CcchHHHHHHHHh
Q 023683 89 SDEVGRVLGQ-VIDTFNLAPVHLVLH-DSALPMSANWVAE 126 (279)
Q Consensus 89 ~~~~~~~l~~-~l~~l~~~~~~lvGh-S~Gg~ia~~~a~~ 126 (279)
++++++++.. ++..++..|-.++|| |=||.+|..++.+
T Consensus 383 Le~fa~d~~~~i~~e~~~~PdlI~GnYsDgnlvA~LLs~~ 422 (550)
T PF00862_consen 383 LEEFADDAEREILAELQGKPDLIIGNYSDGNLVASLLSRK 422 (550)
T ss_dssp HHHHHHHHHHHHHHHHTS--SEEEEEHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCcEEEeccCcchHHHHHHHhh
Confidence 7788888864 456677777778887 7788888888765
No 332
>cd00883 beta_CA_cladeA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=20.78 E-value=1.5e+02 Score=22.86 Aligned_cols=33 Identities=15% Similarity=0.109 Sum_probs=26.0
Q ss_pred HHHHHHHHHHhcCCccEEEEEeCcchHHHHHHH
Q 023683 92 VGRVLGQVIDTFNLAPVHLVLHDSALPMSANWV 124 (279)
Q Consensus 92 ~~~~l~~~l~~l~~~~~~lvGhS~Gg~ia~~~a 124 (279)
....+...+..++.+.++++|||-=|.+...+.
T Consensus 67 ~~asleyAv~~L~v~~IvV~GHs~CGav~a~~~ 99 (182)
T cd00883 67 CLSVLQYAVDVLKVKHIIVCGHYGCGGVKAALT 99 (182)
T ss_pred hhhhHHHHHHhcCCCEEEEecCCCchHHHHHHc
Confidence 456667777889999999999998777766543
No 333
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=20.46 E-value=2.3e+02 Score=21.28 Aligned_cols=51 Identities=4% Similarity=-0.069 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHhc--CCccEEEEEeCcchHHHHHHHHhCCCccceEEEeeCC
Q 023683 90 DEVGRVLGQVIDTF--NLAPVHLVLHDSALPMSANWVAENPGSVKSLTLLDTG 140 (279)
Q Consensus 90 ~~~~~~l~~~l~~l--~~~~~~lvGhS~Gg~ia~~~a~~~p~~v~~lvl~~~~ 140 (279)
++..+.+.++++.+ .-+++.+.|-|..|..-+.++...++.|..++=.+|.
T Consensus 51 ~~~~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vvD~np~ 103 (160)
T PF08484_consen 51 EQSKAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVVDDNPL 103 (160)
T ss_dssp HHHHHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EEES-GG
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEEeCChh
Confidence 33444444444332 2367999999999999999887767777777655544
No 334
>PF08197 TT_ORF2a: pORF2a truncated protein; InterPro: IPR013267 Most isolated ORF2 of TT virus (TTV) encode a 49 amino acid protein (pORF2a) because of an in-frame stop codon. ORF2s isolated from G1 TTV encode a 202 amino acid protein (pORF2ab) [].
Probab=20.35 E-value=76 Score=17.91 Aligned_cols=13 Identities=38% Similarity=0.565 Sum_probs=10.3
Q ss_pred cEEEecCCCCCCC
Q 023683 11 NVIAVDLPGNGFS 23 (279)
Q Consensus 11 ~vi~~D~~G~G~S 23 (279)
.+-+-|+||+|..
T Consensus 36 airardwpg~gq~ 48 (49)
T PF08197_consen 36 AIRARDWPGYGQG 48 (49)
T ss_pred ceEeccCCCcCCC
Confidence 4667899999974
No 335
>PRK07281 methionine aminopeptidase; Reviewed
Probab=20.20 E-value=1.2e+02 Score=25.30 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=26.1
Q ss_pred cccChHHHHHHHHHHHHhcCCccE-EEEEeCcc
Q 023683 85 IELGSDEVGRVLGQVIDTFNLAPV-HLVLHDSA 116 (279)
Q Consensus 85 ~~~~~~~~~~~l~~~l~~l~~~~~-~lvGhS~G 116 (279)
.+.+..++.+.+.++++..+...+ +.+||+.|
T Consensus 170 pG~~~~di~~a~~~~~~~~G~~~~~~~~GHGIG 202 (286)
T PRK07281 170 VGNRIGDIGAAIQEYAESRGYGVVRDLVGHGVG 202 (286)
T ss_pred CCCcHHHHHHHHHHHHHHcCCccCCCeeeeeCC
Confidence 367888888888888888877654 68999999
No 336
>PF01221 Dynein_light: Dynein light chain type 1 ; InterPro: IPR001372 Dynein is a multisubunit microtubule-dependent motor enzyme that acts as the force generating protein of eukaryotic cilia and flagella. The cytoplasmic isoform of dynein acts as a motor for the intracellular retrograde motility of vesicles and organelles along microtubules. Dynein is composed of a number of ATP-binding large subunits (see IPR004273 from INTERPRO), intermediate size subunits and small subunits. Among the small subunits, there is a family of highly conserved proteins which make up this family [, ]. Both type 1 (DLC1) and 2 (DLC2) dynein light chains have a similar two-layer alpha-beta core structure consisting of beta-alpha(2)-beta-X-beta(2) [, ].; GO: 0007017 microtubule-based process, 0005875 microtubule associated complex; PDB: 1F95_A 1F96_A 1F3C_A 3P8M_B 2XQQ_C 1RE6_A 1CMI_A 1PWK_A 1PWJ_A 4DS1_C ....
Probab=20.16 E-value=1e+02 Score=20.37 Aligned_cols=32 Identities=16% Similarity=0.146 Sum_probs=22.0
Q ss_pred ChHHHHHHHHHHHHhcCCccEE-EEEeCcchHH
Q 023683 88 GSDEVGRVLGQVIDTFNLAPVH-LVLHDSALPM 119 (279)
Q Consensus 88 ~~~~~~~~l~~~l~~l~~~~~~-lvGhS~Gg~i 119 (279)
+..++++.|.+.++..-....+ +||.|+|+.+
T Consensus 34 ~~~eiA~~iK~~lD~~yG~~Wh~IVG~~Fg~~~ 66 (89)
T PF01221_consen 34 DEKEIAEFIKQELDKKYGPTWHCIVGKSFGSSV 66 (89)
T ss_dssp SHHHHHHHHHHHHHHHHSS-EEEEEESEEEEEE
T ss_pred cHHHHHHHHHHHHhcccCCceEEEECCcEEEEE
Confidence 4677888888888774323333 7799999754
No 337
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.07 E-value=77 Score=27.29 Aligned_cols=18 Identities=6% Similarity=-0.145 Sum_probs=15.7
Q ss_pred EEEEeCcchHHHHHHHHh
Q 023683 109 HLVLHDSALPMSANWVAE 126 (279)
Q Consensus 109 ~lvGhS~Gg~ia~~~a~~ 126 (279)
.+.|-|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 478999999999999864
No 338
>COG1255 Uncharacterized protein conserved in archaea [Function unknown]
Probab=20.06 E-value=55 Score=23.17 Aligned_cols=19 Identities=26% Similarity=0.531 Sum_probs=15.0
Q ss_pred ChhhhhhcCccEEEecCCC
Q 023683 1 MINSLRSKKFNVIAVDLPG 19 (279)
Q Consensus 1 ~~~~l~~~G~~vi~~D~~G 19 (279)
++..|+++||.|++.|---
T Consensus 28 VA~~L~e~g~dv~atDI~~ 46 (129)
T COG1255 28 VAKRLAERGFDVLATDINE 46 (129)
T ss_pred HHHHHHHcCCcEEEEeccc
Confidence 3567889999999999743
Done!