BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023685
(278 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O64885|BCCIP_ARATH Protein BCCIP homolog OS=Arabidopsis thaliana GN=At2g44510 PE=1
SV=2
Length = 326
Score = 280 bits (717), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 153/245 (62%), Positives = 189/245 (77%), Gaps = 2/245 (0%)
Query: 28 KGIPKHTLEGKSD-LSGSSEEEGSEGVVQADFVFFDPKPDDFHGVKILLQTYLDDTQWDL 86
+ IP +GK + +S SS+EE S+ VQADF FFDPKP DFHGVKILLQ YLDD +WDL
Sbjct: 55 QKIPNLPRKGKEEQVSDSSDEEDSQEDVQADFEFFDPKPTDFHGVKILLQNYLDDKEWDL 114
Query: 87 SGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKD 146
S FVD IL QTTVGTVVK+ D+D++ F++VTALN+ R KD+KC +ELKEFL KVC EK+
Sbjct: 115 SSFVDCILEQTTVGTVVKVADDEDESVFALVTALNMARDKDNKCFRELKEFLRKVCSEKN 174
Query: 147 VIRDLRLLMGEQAHDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFR 206
+ +L +L+ ++A DVGLLVSQRV+NLPPQLLPPL+D LFDEVSWA EDEPT +LR SFR
Sbjct: 175 IANNLEMLLEKKAQDVGLLVSQRVMNLPPQLLPPLYDGLFDEVSWAIEDEPTEKLRRSFR 234
Query: 207 FKCYLLVSKIYK-KNNRNLIRRSGSDGGDGIVYIKPEDENFHKLSLWSFSFPMHAQQVET 265
FK YLLV+KIYK KN + R G + + V++KPEDE F +LS WSF+FPM +Q V +
Sbjct: 235 FKSYLLVTKIYKLKNPKQRKPRHGEEDIEDTVFLKPEDELFLELSSWSFTFPMRSQLVTS 294
Query: 266 QEASN 270
QE N
Sbjct: 295 QEMKN 299
>sp|Q2U600|BCP1_ASPOR Protein bcp1 OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=bcp1 PE=3 SV=1
Length = 290
Score = 124 bits (312), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 121/207 (58%), Gaps = 18/207 (8%)
Query: 53 VVQADFVFFDPKPDDFHGVKILLQTYLD-DTQ-WDLSGFVDLILAQTTVGTVVKMEGDDD 110
+V DF +FDP+P DFHG+KILL+ D D Q +D+S D+ILAQ +G+ VK++G++
Sbjct: 32 IVNVDFEWFDPQPIDFHGLKILLRQLFDSDAQIFDMSALSDMILAQPLLGSTVKVDGNES 91
Query: 111 DTPFSIVTALNLGRYKDHKCIKELKEFL-LKVCQEKDVIRDLRLLMGEQAHDVGLLVSQR 169
D P++ +T LNL +KD IK+L +L K D+ +LL +GL++++R
Sbjct: 92 D-PYAFLTVLNLQEHKDKPVIKDLISYLQRKASSNPDLAPLSQLLSQTPVPPIGLILTER 150
Query: 170 VVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIYKKNNRNL----- 224
++N+P +++PP++ L +E++WA +D + ++F YL+VSK Y++ L
Sbjct: 151 LINMPAEVVPPMYTMLMEEIAWAIQD------KEPYKFSHYLIVSKNYEEVQSKLDMEDS 204
Query: 225 -IRRSGSDGGDGI--VYIKPEDENFHK 248
++ GD + Y PEDE K
Sbjct: 205 RPQKKKKKSGDKVEKFYFHPEDEILEK 231
>sp|Q4WVS2|BCP1_ASPFU Protein bcp1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293
/ CBS 101355 / FGSC A1100) GN=bcp1 PE=3 SV=2
Length = 291
Score = 124 bits (311), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 73/216 (33%), Positives = 124/216 (57%), Gaps = 19/216 (8%)
Query: 53 VVQADFVFFDPKPD-DFHGVKILLQTYLD-DTQ-WDLSGFVDLILAQTTVGTVVKMEGDD 109
+V DF +FDP+P DFHG+K LL+ D D+Q +DLS DLILAQ +G+ VK++G++
Sbjct: 32 IVNVDFEWFDPQPAVDFHGLKNLLRQLFDADSQIFDLSALTDLILAQPLLGSTVKVDGNE 91
Query: 110 DDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKDVIRDLRLLMGEQA-HDVGLLVSQ 168
D P++ +T LNL +KD IK+L +L + + L L+ + +GL++++
Sbjct: 92 SD-PYAFLTVLNLQEHKDKPVIKDLTSYLQRKASSNPSLAPLSQLLSQSPIPPIGLILTE 150
Query: 169 RVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIYK--------KN 220
R++N+P +++PP++ L +E++WA ED + + F YL+VSK Y+ +
Sbjct: 151 RLINMPAEVVPPMYSMLLEEIAWAIED------KEPYNFSHYLIVSKTYEEVESKLDMEE 204
Query: 221 NRNLIRRSGSDGGDGIVYIKPEDENFHKLSLWSFSF 256
+R ++ S + PEDE F + ++ S S
Sbjct: 205 SRPQKKKKKSGSNVERFFFHPEDEVFERHAICSGSI 240
>sp|O74907|BCP1_SCHPO Protein bcp1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=bcp1 PE=3 SV=2
Length = 282
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 135/245 (55%), Gaps = 23/245 (9%)
Query: 32 KHTLEGKSDLSGSSEEEGSEGVVQADFVFFDPKPDDFHGVKILLQTYL--DDTQWDLSGF 89
+H E + + S + + DF FFDP+P DFH K LL+ L D T +LS
Sbjct: 4 RHAEENEDTVMSESLKVVDTDFINVDFEFFDPQPIDFHAFKNLLKQLLGYDHTNVNLSAL 63
Query: 90 VDLILAQTTVGTVVKMEGDDDDTPFSIVTALNLGRYKDHKCIKELKEFLL-KVCQEKDVI 148
DLIL+Q +G+ VK++G++ D P+++++ +NL +D IK+L +++ ++ + +
Sbjct: 64 ADLILSQPLLGSTVKVDGNNSD-PYAMLSVINLNTRRDEPVIKQLTSYIISRLAKSNSRL 122
Query: 149 RD--LRLLMGEQAHDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWA-TEDEPTAELRNSF 205
+ +LL VGL+V++R++N+P Q++PP+++ L +E+ WA E+EP +
Sbjct: 123 ENELQKLLEPNSGSQVGLIVNERLINMPVQVIPPMYNMLLEEMQWAINENEP-------Y 175
Query: 206 RFKCYLLVSKIYKKNNRNLI---------RRSGSDGGDGIVYIKPEDENFHKLSLWSFSF 256
F YLL+S+ Y + L+ ++S G+ +++ PEDE F ++++ +
Sbjct: 176 NFTHYLLLSRTYTEIESKLMDDERPSKKGKKSKKTSGEEVMFFHPEDEQFREVAIDIADY 235
Query: 257 PMHAQ 261
P Q
Sbjct: 236 PFANQ 240
>sp|Q5AXW5|BCP1_EMENI Protein bcp1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 /
CBS 112.46 / NRRL 194 / M139) GN=bcp1 PE=3 SV=1
Length = 290
Score = 112 bits (281), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 126/231 (54%), Gaps = 22/231 (9%)
Query: 34 TLEGKSDLSGSSEEEGSEGVVQADFVFFDPKPDDFHGVKILLQTYLD-DTQ-WDLSGFVD 91
++ G +G S +E + +V DF +FDP+ DFHG+K L++ D D Q DLSG D
Sbjct: 13 SMGGTDPATGDSSDEDID-MVNVDFEWFDPQEIDFHGIKHLIRQLFDVDAQDLDLSGLTD 71
Query: 92 LILAQTTVGTVVKMEGDDDDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKDVIRDL 151
+ILAQ +G+ VK +G D D P++ +T LNL + D IK L ++ + + L
Sbjct: 72 MILAQPLLGSTVKTDGKDSD-PYAFLTVLNLQEHADKPPIKSLTTYIKRKASGTPSLSPL 130
Query: 152 RLLMGEQA-HDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCY 210
L + +GL++++R++N+P +++PP++ L +E++WA E+ + + F Y
Sbjct: 131 AQLFSQTPIPPIGLILTERLINMPSEVVPPMYAMLQEEITWAIEE------KEPYNFSHY 184
Query: 211 LLVSKIYKKNNRNL----------IRRSGSDGGDGIVYIKPEDENFHKLSL 251
L+VSK Y++ L +++G + G+ + PEDE + +L
Sbjct: 185 LIVSKTYEEVESKLDAEDSRPQKKKKKAGQEKGERF-FFHPEDEVLERHAL 234
>sp|Q4HZK7|BCP1_GIBZE Protein BCP1 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC
9075 / NRRL 31084) GN=BCP1 PE=3 SV=1
Length = 285
Score = 110 bits (275), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 125/222 (56%), Gaps = 19/222 (8%)
Query: 46 EEEGSEG----VVQADFVFFDPKPD-DFHGVKILLQTY--LDDTQWDLSGFVDLILAQTT 98
+E+GS+ +V DF +F+ P+ DFHG K LL+ +D +++S DL+L+Q T
Sbjct: 22 DEDGSDDEDFDMVNVDFEWFNFDPEVDFHGTKTLLRQLFDVDANLFNMSALADLVLSQPT 81
Query: 99 VGTVVKMEGDDDDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKDVIRDLRLLMGEQ 158
+G+ +K++G +D ++++T LN ++D + +K++ ++L++ Q + + ++
Sbjct: 82 IGSTIKVDGKANDA-YALLTVLNTAVHQDKEPMKDIIKYLVEKAQTNSSLAPIADVLSSG 140
Query: 159 AHDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIYK 218
H VGL+ S+R++N+P +L PPL+ L DEV A ED + + F YL++SK Y+
Sbjct: 141 KH-VGLVFSERLINMPSELAPPLYSMLVDEVEAAVED------KEPYNFSHYLILSKTYQ 193
Query: 219 KNNRNL----IRRSGSDGGDGIVYIKPEDENFHKLSLWSFSF 256
+ L +R + G+ Y EDE HK ++ +F
Sbjct: 194 ELESKLDVENQKRKKAKEEAGMYYFHMEDEVLHKHAVAHGNF 235
>sp|Q6BII5|BCP1_DEBHA Protein BCP1 OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767
/ JCM 1990 / NBRC 0083 / IGC 2968) GN=BCP1 PE=3 SV=1
Length = 307
Score = 101 bits (252), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 111/189 (58%), Gaps = 24/189 (12%)
Query: 46 EEEGSEG--VVQADFVFFDPKPD-DFHGVK-ILLQTYLDD-TQWDLSGFVDLILAQTTVG 100
+++G EG ++ DF +FD PD DFH +K L Q + DD T +D+S DLIL + +VG
Sbjct: 29 QQQGEEGEDIINVDFDYFDLNPDVDFHAIKNFLRQLFGDDATTFDVSSLADLILTKNSVG 88
Query: 101 TVVKMEGDDDDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKDVIRDLRLLMGEQAH 160
T +K EG + D PF+I++ +N+ + C+K + +++L+ K++ +L L +A
Sbjct: 89 TTIKTEGMESD-PFAILSVINMTENINKPCLKTVVDYVLQKTS-KNLEFNLMLRKLLEAK 146
Query: 161 D-----------VGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKC 209
D VGL++S+R++N+P +++PP++ L +E++ A + + F
Sbjct: 147 DQKATSSSKSLKVGLIISERMINMPVEVVPPMYKMLLEEMTKA------EDAHEKYEFDY 200
Query: 210 YLLVSKIYK 218
+L++SK+YK
Sbjct: 201 FLVISKVYK 209
>sp|Q7S8R3|BCP1_NEUCR Protein bcp-1 OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A
/ CBS 708.71 / DSM 1257 / FGSC 987) GN=bcp-1 PE=3 SV=1
Length = 293
Score = 95.1 bits (235), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 119/227 (52%), Gaps = 18/227 (7%)
Query: 53 VVQADFVFFDPKPD-DFHGVKILLQTYLD-DTQ-WDLSGFVDLILAQTTVGTVVKMEGDD 109
++ DF F+ D DFHGVK LL+ D D Q +DLSG D+I+ Q T+G+ K++
Sbjct: 39 IINVDFELFNYDKDIDFHGVKTLLRQLFDADAQLFDLSGLSDMIIEQNTIGSTCKVDDKA 98
Query: 110 DDTPFSIVTALNLGRYKDHKCIKELKEFLL-KVCQEKDV-IRDLRLLMGEQAHDVGLLVS 167
+D ++ +T LN +++ K + +L E+L K + D + L L VG+++S
Sbjct: 99 NDA-YAFLTVLNAWEHREKKPVAQLIEYLSDKAVKAGDSSLSVLPELFTSGKAQVGIVLS 157
Query: 168 QRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIYKKNNRNL--- 224
+R++N+P +++PP+ + + +E+ A +D + + F YL+VS+ Y + +L
Sbjct: 158 ERLINMPAEVIPPMWNMMIEEIQDAVDD------KEPYEFTHYLVVSRAYVEVESSLDQE 211
Query: 225 -IRRSGSDGGDGIVYIKPEDENF--HKLSLWSFSFPMHAQQVETQEA 268
+R G+ Y PEDE H + +++F +++ A
Sbjct: 212 EQKRKRLRDEKGLQYFHPEDEEMRKHAVGAGTYTFTKEGDSADSKRA 258
>sp|Q6C7K5|BCP1_YARLI Protein BCP1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=BCP1 PE=3 SV=1
Length = 302
Score = 94.0 bits (232), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 124/234 (52%), Gaps = 32/234 (13%)
Query: 53 VVQADFVFFDPKPD-DFHGVKILLQTYLDD--TQWDLSGFVDLILAQTTVGTVVKMEGDD 109
+ DF +FD D D+H + LL+ LD T ++LS D+IL Q + GT +K +G +
Sbjct: 50 TIDVDFEYFDFNKDIDYHAIGNLLRQLLDSDSTSFNLSELSDMILEQESCGTTIKTDGKE 109
Query: 110 DDTPFSIVTALNLGRYKDHK--CIKELKEFLLKVCQE-KDVIRDLRLLMGEQA-HDVGLL 165
D PF+I+T +N+ ++KD+K I L ++ + Q+ ++ + +R L+G + VGL+
Sbjct: 110 SD-PFAILTVINMSKHKDNKKGVIAALIDYFVARTQDLPELHKQMRKLLGPSSTSKVGLI 168
Query: 166 VSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIYKKNNRNL- 224
+S+R++N+P Q++PP++ L DE T+D+ F +L++SK + + ++
Sbjct: 169 ISERLINMPVQVVPPMYKMLLDE----TKDQ---------DFDYFLVLSKTFTEAETSVD 215
Query: 225 --------IRRSGSDGGDGIVYIKPEDENFHKLSLW--SFSFPMHAQQVETQEA 268
+ G Y PEDE + S S++F +Q+ +++ A
Sbjct: 216 EEDERPSKKNKKGPGYKPETYYFHPEDEVIQEKSTQYGSYAFKKASQEADSKRA 269
>sp|Q2H137|BCP1_CHAGB Protein BCP1 OS=Chaetomium globosum (strain ATCC 6205 / CBS 148.51
/ DSM 1962 / NBRC 6347 / NRRL 1970) GN=BCP1 PE=3 SV=1
Length = 291
Score = 93.2 bits (230), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 114/212 (53%), Gaps = 16/212 (7%)
Query: 53 VVQADFVFFDPKPD-DFHGVKILLQTYLD-DTQ-WDLSGFVDLILAQTTVGTVVKMEGDD 109
+V DF F+ DFHGVK LL+ D D Q ++LS DLI+ Q T+G+ K++
Sbjct: 38 IVNVDFELFNYDSQIDFHGVKTLLRQLFDTDAQLFNLSALSDLIIEQNTIGSTCKVDDKA 97
Query: 110 DDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKDVIRD-LRLLMGEQAHDVGLLVSQ 168
+D ++ +T LNL ++ + + +L E+L + D + L L+ H VGL++++
Sbjct: 98 NDA-YAFLTVLNLQEHRAKQPVAQLIEYLTDRAKSNDSLAGVLPELLASDKH-VGLVLAE 155
Query: 169 RVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIYKKNNRNL---- 224
R++N+P +++PP+ + DE+ A ED + + F YL+VS+ Y++ +L
Sbjct: 156 RLLNMPAEVIPPMWTCMIDEIEAAVED------KEPYEFSHYLVVSRTYREVASSLDQSE 209
Query: 225 IRRSGSDGGDGIVYIKPEDENFHKLSLWSFSF 256
++ + + + PED+ K ++ S ++
Sbjct: 210 RKQKKAREEAELQFFHPEDDEMRKHAVASGAY 241
>sp|Q59PE7|BCP1_CANAL Protein BCP1 OS=Candida albicans (strain SC5314 / ATCC MYA-2876)
GN=BCP1 PE=3 SV=1
Length = 321
Score = 91.7 bits (226), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 96/177 (54%), Gaps = 18/177 (10%)
Query: 53 VVQADFVFFDPKPD-DFHGVKILLQTYL--DDTQWDLSGFVDLILAQTTVGTVVKMEGDD 109
V DF FFD P DFH K L+ D+ +++LS DLIL + +VGT +K EG +
Sbjct: 44 TVDVDFDFFDLNPQIDFHATKNFLRQLFGDDNGEFNLSEIADLILRENSVGTSIKTEGME 103
Query: 110 DDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKD----VIRDLRLLMGEQAHD---- 161
D PF+I++ +NL + IK+L E++L + K +++ L + D
Sbjct: 104 SD-PFAILSVINLTNNLNVAVIKQLIEYILNKTKSKTEFNIILKKLLTNQNDTTRDRKFK 162
Query: 162 VGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIYK 218
GL++S+R +N+P +++PP++ L E+ A + ++ F +L++S++Y+
Sbjct: 163 TGLIISERFINMPVEVIPPMYKMLLQEMEKA------EDAHENYEFDYFLIISRVYQ 213
>sp|Q5BJJ7|BCCIP_DANRE Protein BCCIP homolog OS=Danio rerio GN=bccip PE=2 SV=1
Length = 301
Score = 90.1 bits (222), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 105/215 (48%), Gaps = 23/215 (10%)
Query: 56 ADFVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKM---------E 106
DF +DFHG+K LLQ + S D+I+ Q +G+V++ E
Sbjct: 48 VDFEAHTISDNDFHGIKTLLQQLFLKCHVNTSDLTDIIIQQNHIGSVIRQAEVPEDSDDE 107
Query: 107 GDDDDTPFSIVTALNLGRYKDHKCIKELKEFLLKV---CQEKDVIRDLRLLMGEQAHDVG 163
GD D+ F ++ +NL + +C+++LK+ +L C D + L+ A VG
Sbjct: 108 GDPDEV-FGFISMVNLTERQGVECLEKLKDMILDQCVKCSTPDGQERMENLLQGNAQSVG 166
Query: 164 LLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKC--YLLVSKIYKKNN 221
LL+S+R VN+PPQ+ PLH L E++ A+ N KC L++SK K
Sbjct: 167 LLLSERFVNVPPQIALPLHKQLQKEMA-------EAQRTNKPSGKCQFCLMISKTCKPLK 219
Query: 222 RNLIRRSGSDGGDGIVYIKPEDENFHKLSLWSFSF 256
+ I +G D ++++ E+E F++ + FS+
Sbjct: 220 KKSI-SAGDQAKDELLFVNDEEECFYEQATVKFSY 253
>sp|Q9CWI3|BCCIP_MOUSE BRCA2 and CDKN1A-interacting protein OS=Mus musculus GN=Bccip PE=2
SV=1
Length = 316
Score = 87.8 bits (216), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 23/220 (10%)
Query: 57 DFVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKMEGDDDDTP--- 113
+F + +D+ G+K LLQ + + +L++ Q +G+V+K +D+
Sbjct: 62 EFEAYSISDNDYGGIKKLLQQLFLKAPVNTAELTNLLMQQNHIGSVIKQTDVSEDSDDEV 121
Query: 114 -----FSIVTALNLGRYKDHKCIKELKEFLLKVCQ---EKDVIRDLRLLMGEQAHDVGLL 165
F ++ LNL K +C +++KE +L C+ E+ ++ L L+ + + VGLL
Sbjct: 122 DEDEIFGFISLLNLTERKGTQCAEQIKELVLSFCEKTCEQSMVEQLDKLLNDTSKPVGLL 181
Query: 166 VSQRVVNLPPQLLPPLHDALFDEVSWATE-DEPTAELRNSFRFKC--YLLVSKIYKKNNR 222
+S+R +N+PPQ+ P+H L E+S A ++P KC YLL+SK + + +
Sbjct: 182 LSERFINVPPQIALPMHQQLQKELSEARRTNKPCG--------KCCFYLLISKTFMEAGK 233
Query: 223 NLIR-RSGSDGGDGIVYIKPEDENFHKLSLWSFSFPMHAQ 261
+ R R S +++ E+E F++ ++ FS+ + +
Sbjct: 234 SSSRKRQDSLQQGALMFANAEEEFFYEKAILKFSYSVQGE 273
>sp|Q2NL37|BCCIP_BOVIN BRCA2 and CDKN1A-interacting protein OS=Bos taurus GN=BCCIP PE=2
SV=1
Length = 306
Score = 86.7 bits (213), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 112/220 (50%), Gaps = 23/220 (10%)
Query: 57 DFVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKMEGDDDDTP--- 113
+F + +D+ G+K LLQ + + +L++ Q +G+V+K +D+
Sbjct: 52 EFEAYSISDNDYDGIKKLLQQLFLKAPVNTAELTNLLIQQNHIGSVIKQTDVSEDSDDEV 111
Query: 114 -----FSIVTALNLGRYKDHKCIKELKEFLLKVCQ---EKDVIRDLRLLMGEQAHDVGLL 165
F ++ LNL K C +++KE +L++C+ EK ++ L L + A VG L
Sbjct: 112 DEDEIFGFISLLNLTERKGTPCAEQIKELILRLCEKNCEKSMVEQLDRLFNDTARPVGFL 171
Query: 166 VSQRVVNLPPQLLPPLHDALFDEVSWA-TEDEPTAELRNSFRFKC--YLLVSKIYKKNNR 222
+S+R +N+PPQ+ P+H L E++ A ++P KC YLL+SK + + +
Sbjct: 172 LSERFINVPPQIALPMHQQLQKELAEAHRANKPCG--------KCYFYLLISKTFVEAGK 223
Query: 223 -NLIRRSGSDGGDGIVYIKPEDENFHKLSLWSFSFPMHAQ 261
N ++ + D +++ E+E F++ ++ F++ + +
Sbjct: 224 SNSKKKRSNQKKDELMFANAEEEFFYEKAILKFNYSVQEE 263
>sp|Q9P287|BCCIP_HUMAN BRCA2 and CDKN1A-interacting protein OS=Homo sapiens GN=BCCIP PE=1
SV=1
Length = 314
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 112/220 (50%), Gaps = 23/220 (10%)
Query: 57 DFVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKM--------EGD 108
+F + +D+ G+K LLQ + + DL++ Q +G+V+K +
Sbjct: 60 EFEAYSLSDNDYDGIKKLLQQLFLKAPVNTAELTDLLIQQNHIGSVIKQTDVSEDSNDDM 119
Query: 109 DDDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQ---EKDVIRDLRLLMGEQAHDVGLL 165
D+D F ++ LNL K +C+++++E +L+ C+ EK ++ L + + VGLL
Sbjct: 120 DEDEVFGFISLLNLTERKGTQCVEQIQELVLRFCEKNCEKSMVEQLDKFLNDTTKPVGLL 179
Query: 166 VSQRVVNLPPQLLPPLHDALFDEVSWA-TEDEPTAELRNSFRFKC--YLLVSKIY-KKNN 221
+S+R +N+PPQ+ P++ L E++ A ++P KC YLL+SK + +
Sbjct: 180 LSERFINVPPQIALPMYQQLQKELAGAHRTNKPCG--------KCYFYLLISKTFVEAGK 231
Query: 222 RNLIRRSGSDGGDGIVYIKPEDENFHKLSLWSFSFPMHAQ 261
N ++ + +++ E+E F++ ++ F++ + +
Sbjct: 232 NNSKKKPSNKKKAALMFANAEEEFFYEKAILKFNYSVQEE 271
>sp|Q9VFR0|BCCIP_DROME Protein BCCIP homolog OS=Drosophila melanogaster GN=CG9286 PE=2
SV=2
Length = 297
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 103/224 (45%), Gaps = 29/224 (12%)
Query: 54 VQADFVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTVV--------KM 105
VQ DF P D G+ LLQ + + DLI+AQ +G+V+ +
Sbjct: 43 VQIDFEGRAPVDPDAQGISQLLQRLFLRAHINCNQMADLIIAQNFIGSVICQCDDEGTES 102
Query: 106 EGDDDD-----TPFSIVTALNLGRYKDHKCIKELKEFLL---KVCQEKDVIRDLRLLMGE 157
E +DD+ T F I + LNL KD I +L+ ++L K +V + L+ ++
Sbjct: 103 ETEDDNMVEDGTIFGITSVLNLTAKKDQPSIAQLRTYILDRAKTHASPEVQQQLKEILDS 162
Query: 158 QAHDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIY 217
+ VG L+++R +N+P Q+ PL +L E+ A + + F LL+ K Y
Sbjct: 163 EQRHVGFLINERFINIPAQISVPLLQSLQQEIEAAKAK------KMKYDFGTLLLLVKFY 216
Query: 218 KKNNRNLIRRSGSDGGDGIVYIKPEDENFHKLSLWSFSFPMHAQ 261
+K ++ G G D VY EDE + +SF + M ++
Sbjct: 217 RKESKK-----GKPGED--VYTNAEDELLSDRAKFSFEYSMASE 253
>sp|Q6GNI0|BCCIP_XENLA Protein BCCIP homolog OS=Xenopus laevis GN=bccip PE=2 SV=1
Length = 308
Score = 78.2 bits (191), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 110/222 (49%), Gaps = 22/222 (9%)
Query: 54 VQADFVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKM-EGDDDDT 112
V DF + D+ G+K LL+ ++S DL++ Q +G+ +K EG DD
Sbjct: 52 VNIDFEAYTISDADYDGIKKLLKQLFLKAHVNISELTDLLIQQNHIGSAIKQAEGQDDSD 111
Query: 113 P-------FSIVTALNLGRYKDHKCIKELKEFLLKVCQ---EKDVIRDLRLLMGEQAHDV 162
F +++ +NL K C++++KE +L C+ E+ ++ ++ + + V
Sbjct: 112 DDEDDDHVFGVISLVNLTERKGTACVEQIKELILSRCEENCEQSLVEQFDKVLNDNSKPV 171
Query: 163 GLLVSQRVVNLPPQLLPPLHDALFDEVSWATE-DEPTAELRNSFRFKC--YLLVSKIYKK 219
G L+S+R +N+P Q+ P+H L E++ + ++P KC YL++SK + +
Sbjct: 172 GFLLSERFINVPAQIALPMHQQLQKELADSQRTNKPCG--------KCHYYLILSKTFME 223
Query: 220 NNRNLIRRSGSDGGDGIVYIKPEDENFHKLSLWSFSFPMHAQ 261
+ GS + +++ EDE F++ +L F++ + +
Sbjct: 224 ATKTSKGSVGSQAKEELMFANAEDEFFYEKALVKFNYSVQEE 265
>sp|Q4PA45|BCP1_USTMA Protein BCP1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=BCP1
PE=3 SV=1
Length = 335
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/180 (29%), Positives = 89/180 (49%), Gaps = 20/180 (11%)
Query: 54 VQADFVFFDPKPDDFHGVKILLQT--YLDDTQWDLSGFVDLILAQTT---VGTVVKMEGD 108
+ DF F P+ DF +K LLQ Y +T+ DLS D ++ +T VGT +K+ D
Sbjct: 32 INVDFDFRAPEEIDFQALKRLLQQLFYTHNTKLDLSSLADHVVKTSTTQGVGTTIKIVDD 91
Query: 109 DDDTPFSIVTALNLGRYKDH--KCIKELKEFLLKVCQE------KDVIRDLRLLMGEQAH 160
+D P++ V+A+ L K + L ++LL+V + DVI+ A
Sbjct: 92 EDQDPYAFVSAITLSSEKKEGSEAANSLSKYLLEVTSKPSSKSVHDVIKSAASSTSTNAP 151
Query: 161 DVGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIYKKN 220
+ +L +R+VN+PPQ+ PPL+ L +EV + ++ R YL S+++ +
Sbjct: 152 VIAVL-HERMVNMPPQVAPPLYKMLLEEVQASLVS------TSATRPSHYLFFSRVFSAD 204
>sp|Q6GL92|BCCIP_XENTR Protein BCCIP homolog OS=Xenopus tropicalis GN=bccip PE=2 SV=1
Length = 310
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 105/221 (47%), Gaps = 24/221 (10%)
Query: 57 DFVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKMEGDDDDTP--- 113
DF + D G+K LL+ ++S DL++ Q +G+ +K +D+
Sbjct: 55 DFEAYTISDTDSEGIKKLLKQLFLKAHVNISELTDLLIQQNHIGSAIKQAESQEDSDDDD 114
Query: 114 -------FSIVTALNLGRYKDHKCIKELKEFLLKVCQ---EKDVIRDLRLLMGEQAHDVG 163
F ++ +NL K C++++KE +L C+ E+ ++ ++ + VG
Sbjct: 115 DDDVDHVFGFISLVNLTERKGTSCVEQIKELILTRCEENCEQSMVEQFDKVLNNNSKPVG 174
Query: 164 LLVSQRVVNLPPQLLPPLHDALFDEVS-WATEDEPTAELRNSFRFKC--YLLVSKIYKKN 220
L+S+R +N+P Q+ P+H L E++ ++P KC YL++SK + +
Sbjct: 175 FLLSERFINVPAQIALPMHQQLQKELADTQRTNKPCG--------KCYYYLILSKTFVEA 226
Query: 221 NRNLIRRSGSDGGDGIVYIKPEDENFHKLSLWSFSFPMHAQ 261
+ R GS + +++ EDE F++ +L FS+ + +
Sbjct: 227 AKTSKGRVGSQAKEELMFANAEDEFFYEKALLKFSYSVQEE 267
>sp|Q6FY61|BCP1_CANGA Protein BCP1 OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=BCP1 PE=3 SV=1
Length = 276
Score = 76.6 bits (187), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 97/194 (50%), Gaps = 27/194 (13%)
Query: 36 EGKSDLSGSSEEEGSEG-----VVQADFVFFDPKPD-DFHGVKILLQTYL---DDTQWDL 86
E + D+S + EE + G +V DF FFD PD DFH VK L++ L + + L
Sbjct: 25 ESEIDISSTDSEEENAGDEEQEIVNIDFDFFDGNPDVDFHAVKHLIRQLLGPQESNRVQL 84
Query: 87 SGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKD 146
S DLIL+ T T +K +G + D P+ ++ +N KD K L++ ++
Sbjct: 85 SALSDLILSSPT--TTIKTDGKESD-PYCFLSFINYKENKDSDYAKYLRKLDTRIETF-- 139
Query: 147 VIRDLRLLMGEQAHDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFR 206
L+ L L++S+R++N+PP+++ PL+ ++ + A E +P
Sbjct: 140 ----LQTLDNTGNKSCALVMSERLINMPPEVVTPLYRITMEDAAAANEGKP--------- 186
Query: 207 FKCYLLVSKIYKKN 220
F Y++VS+ Y+ N
Sbjct: 187 FDFYVIVSRKYEVN 200
>sp|Q06338|BCP1_YEAST Protein BCP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=BCP1 PE=1 SV=1
Length = 283
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/219 (24%), Positives = 101/219 (46%), Gaps = 34/219 (15%)
Query: 53 VVQADFVFFDPKPD-DFHGVKILLQTYL---DDTQWDLSGFVDLILAQTTVGTVVKMEGD 108
+V DF FF P+ DFH +K LL+ + T+ LS DLIL T T +K +G
Sbjct: 48 IVNIDFDFFGGNPEVDFHALKNLLRQLFGPQESTRIQLSSLADLILGSPT--TTIKTDGK 105
Query: 109 DDDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKDVIRDLRLLMGEQAHDVGLLVSQ 168
+ D P+ ++ ++ +K L++ +++ + ++ + L++S+
Sbjct: 106 ESD-PYCFLSFVDFKANHLSDYVKYLQKVDMRLSTF------FKTMIDSGNKNCALVLSE 158
Query: 169 RVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKCYLLVSKIYK---------- 218
R++N+PP+++PPL+ ++V+ A D+ + Y++V++ Y+
Sbjct: 159 RLINMPPEVVPPLYKITLEDVATALGDDK--------HYDFYIIVTRKYEVNFDTDDDTD 210
Query: 219 --KNNRNLIRRSGSD-GGDGIVYIKPEDENFHKLSLWSF 254
K N+N RS D + Y ED F K + F
Sbjct: 211 SGKRNKNKDERSKKRVKADEVDYFHEEDRFFEKYAKIHF 249
>sp|Q756K9|BCP1_ASHGO Protein BCP1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=BCP1 PE=3 SV=1
Length = 271
Score = 58.2 bits (139), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 92/189 (48%), Gaps = 32/189 (16%)
Query: 39 SDLSGSSEEEGSEGVVQADFVFFDPKPD-DFHGVKILLQTYL---DDTQWDLSGFVDLIL 94
+D + +G E ++ DF FF+ P DFH +K LL+ + + LS D+IL
Sbjct: 28 TDSESDQDADGDEEIINIDFDFFNGNPGVDFHALKNLLRQLFGQQEANRMQLSTLADIIL 87
Query: 95 AQTTVGTVVKMEGDDDDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKDVIRDLRL- 153
T T +K +G + D P+ ++ ++ YK+H+ + ++L+ + D RL
Sbjct: 88 QSPT--TTIKTDGQESD-PYCFLSFVD---YKEHRT-SDYAKYLVNL--------DPRLE 132
Query: 154 ----LMGEQAHDVGLLVSQRVVNLPPQLLPPLHDALFDEVSWATEDEPTAELRNSFRFKC 209
+ L++ +R++N+P +++PPL++ ++VS + D F
Sbjct: 133 TFFATIDNSDKTCALILCERLINMPVEVVPPLYNITLNDVSSNSSDGK--------HFDF 184
Query: 210 YLLVSKIYK 218
YL+VS+ Y+
Sbjct: 185 YLVVSRKYE 193
>sp|Q23402|BCCIP_CAEEL Protein BCCIP homolog OS=Caenorhabditis elegans GN=ZK1127.4 PE=3
SV=1
Length = 349
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 12/151 (7%)
Query: 51 EGVVQADFVFFDPKPDDFHG-VKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKMEGDD 109
+ ++ DF + P DD G V +L QT+L T DL + I+A+ G V+ DD
Sbjct: 65 QNIMDFDFEAYPPSEDDRDGIVNMLTQTFL-RTDIDLKAMSEGIIAKAPHGVVLTQAYDD 123
Query: 110 DDT-----PFSIVTALNLGRYKDH--KCIKELKEFLLKVCQE---KDVIRDLRLLMGEQA 159
++T + + T + L KD K IK+L ++L ++ ++ + + +
Sbjct: 124 EETEEDYMAYGLCTTVPLNDNKDDAPKFIKDLFTYVLNRAKKGAPTEIYKKIEEIQVSGD 183
Query: 160 HDVGLLVSQRVVNLPPQLLPPLHDALFDEVS 190
L V++R++N P ++P + ++ +++S
Sbjct: 184 GKSALFVNERLLNFPTIVVPQIFGSIREDLS 214
>sp|Q61GH1|BCCIP_CAEBR Protein BCCIP homolog OS=Caenorhabditis briggsae GN=CBG11215 PE=3
SV=1
Length = 346
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 71/146 (48%), Gaps = 12/146 (8%)
Query: 51 EGVVQADFVFFDPKPDDFHG-VKILLQTYLDDTQWDLSGFVDLILAQTTVGTVVKMEGDD 109
+ ++ DF P DD G V +L QT+L T D+ + I+++ G V+ DD
Sbjct: 67 QNIMDFDFEGSAPCDDDRDGIVNMLTQTFL-RTDIDMKAMAESIISKAPHGLVLTQAYDD 125
Query: 110 DDTP-----FSIVTALNLGRYKDH--KCIKELKEFLLKVCQE---KDVIRDLRLLMGEQA 159
+ T + + T L L K++ K IK++ +LL ++ ++ + + +
Sbjct: 126 EQTEEDFMVYGLCTTLALNENKENSPKFIKDIFTYLLNRAKKGAPTEIYKKIEEIQEAGD 185
Query: 160 HDVGLLVSQRVVNLPPQLLPPLHDAL 185
GL V++R++N P ++P L +++
Sbjct: 186 GKTGLFVNERLLNFPTIVVPQLFESI 211
>sp|Q8BHW6|SPT21_MOUSE Spermatogenesis-associated protein 21 OS=Mus musculus GN=Spata21
PE=2 SV=1
Length = 681
Score = 36.2 bits (82), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 45/101 (44%), Gaps = 10/101 (9%)
Query: 2 PRGPTRDKRRTYKSKDQKGFPLSSKDKGIPKHTLEGKSDLSGSSEEEGSEGVVQADFVFF 61
PRGP R+ R T S+D G + + P+ T +G +L E+ G DFV
Sbjct: 60 PRGPERELRPTGSSQDGSGELPTQEPSARPRTTQDGPRELQAGPEQVQPSG----DFVAS 115
Query: 62 DPKPDDFHGVKILLQTYLDDTQWDLSGFVDLILAQTTVGTV 102
+ +P + +QT +W + +++LA++ G
Sbjct: 116 EGRP------QPAMQTKDQQKRWQSAEVKEILLAESCQGNT 150
>sp|Q9A2H2|AROA_CAUCR 3-phosphoshikimate 1-carboxyvinyltransferase OS=Caulobacter
crescentus (strain ATCC 19089 / CB15) GN=aroA PE=3 SV=1
Length = 443
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 95 AQTTVGTVVKMEGDDDDTPFSIVTALNLGRYK---DHKCIKELKEFLLKVCQEKD---VI 148
Q GT V + GD F +V AL + + + + EL+ L QE VI
Sbjct: 228 GQKLTGTHVAVPGDPSSAAFPLVAALIVPGSEVTVEGVMLNELRTGLFTTLQEMGADLVI 287
Query: 149 RDLRLLMGEQAHDVGLLVSQ-RVVNLPPQLLPPLHD 183
++R+ GE+ D+ SQ + V +PP+ P + D
Sbjct: 288 SNVRVASGEEVGDITARYSQLKGVVVPPERAPSMID 323
>sp|B8H6A8|AROA_CAUCN 3-phosphoshikimate 1-carboxyvinyltransferase OS=Caulobacter
crescentus (strain NA1000 / CB15N) GN=aroA PE=3 SV=1
Length = 443
Score = 33.9 bits (76), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 7/96 (7%)
Query: 95 AQTTVGTVVKMEGDDDDTPFSIVTALNLGRYK---DHKCIKELKEFLLKVCQEKD---VI 148
Q GT V + GD F +V AL + + + + EL+ L QE VI
Sbjct: 228 GQKLTGTHVAVPGDPSSAAFPLVAALIVPGSEVTVEGVMLNELRTGLFTTLQEMGADLVI 287
Query: 149 RDLRLLMGEQAHDVGLLVSQ-RVVNLPPQLLPPLHD 183
++R+ GE+ D+ SQ + V +PP+ P + D
Sbjct: 288 SNVRVASGEEVGDITARYSQLKGVVVPPERAPSMID 323
>sp|A5FMW5|Y413_FLAJ1 UPF0758 protein Fjoh_0413 OS=Flavobacterium johnsoniae (strain ATCC
17061 / DSM 2064 / UW101) GN=Fjoh_0413 PE=3 SV=1
Length = 229
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 94 LAQTTVGTVVKMEGDDDDTPFSIVTALNLGRYKDHKCIKELKEFLLKVCQEKDVIRDLRL 153
L + +V ++K +G + SIV AL LGR + + I +LK K+ KD ++
Sbjct: 65 LWKMSVSQLIKFKGIGEAKAVSIVAALELGRRQRAEDILKLK----KITSSKDAFTIMQP 120
Query: 154 LMGEQAHD 161
++GE H+
Sbjct: 121 IIGELPHE 128
>sp|Q8N1I0|DOCK4_HUMAN Dedicator of cytokinesis protein 4 OS=Homo sapiens GN=DOCK4 PE=1 SV=3
Length = 1966
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 5/57 (8%)
Query: 134 LKEFLLKVCQEKDVIRDLRLLMGEQAH--DVGLLVSQRVVNLPPQLLPPLHDALFDE 188
+KE++L ++ + I LR LM EQA + GL V ++ V PQ + PLH L D+
Sbjct: 1526 VKEYILSHPEDGEKIARLRELMLEQAQILEFGLAVHEKFV---PQDMRPLHKKLVDQ 1579
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.138 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,209,638
Number of Sequences: 539616
Number of extensions: 4922441
Number of successful extensions: 11252
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 11175
Number of HSP's gapped (non-prelim): 40
length of query: 278
length of database: 191,569,459
effective HSP length: 116
effective length of query: 162
effective length of database: 128,974,003
effective search space: 20893788486
effective search space used: 20893788486
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)