Query 023685
Match_columns 278
No_of_seqs 129 out of 246
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 11:03:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023685.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023685hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3t90_A Glucose-6-phosphate ace 63.3 18 0.00061 26.5 6.2 64 58-121 5-72 (149)
2 3i3g_A N-acetyltransferase; ma 59.9 41 0.0014 25.0 7.9 63 57-121 20-85 (161)
3 1jvr_A HTLV-II MA, MA, human T 58.3 7.3 0.00025 31.5 3.2 33 63-95 39-75 (137)
4 2l9b_B MRNA 3'-END-processing 57.6 7.1 0.00024 27.1 2.6 35 67-101 10-46 (53)
5 1cjw_A Protein (serotonin N-ac 29.9 74 0.0025 23.2 4.8 61 58-122 6-70 (166)
6 2vez_A Putative glucosamine 6- 29.1 1.9E+02 0.0066 22.2 7.4 63 58-121 48-114 (190)
7 4fd4_A Arylalkylamine N-acetyl 27.6 84 0.0029 24.5 5.0 65 58-122 7-81 (217)
8 1pfj_A TFIIH basal transcripti 27.5 46 0.0016 26.2 3.2 28 54-81 73-102 (108)
9 4evy_A Aminoglycoside N(6')-ac 26.0 1.9E+02 0.0066 21.5 6.7 56 59-119 23-80 (166)
10 4ag7_A Glucosamine-6-phosphate 25.1 1.6E+02 0.0055 21.5 6.0 63 58-120 22-88 (165)
11 4e0a_A BH1408 protein; structu 24.5 1.3E+02 0.0044 21.8 5.3 60 60-122 3-75 (164)
12 2fe7_A Probable N-acetyltransf 24.1 1.4E+02 0.0047 21.8 5.4 63 57-121 10-78 (166)
13 1rpb_A Tricyclic peptide RP 71 23.0 11 0.00037 22.2 -0.9 9 270-278 14-22 (26)
14 1kux_A Aralkylamine, serotonin 22.2 1.5E+02 0.0051 23.0 5.5 59 58-120 35-97 (207)
15 3eo4_A Uncharacterized protein 22.1 2.4E+02 0.0082 20.7 7.7 66 57-122 13-86 (164)
16 1s3z_A Aminoglycoside 6'-N-ace 20.9 1.4E+02 0.0047 22.1 4.9 60 58-121 21-82 (165)
17 1u9d_A Hypothetical protein VC 20.1 71 0.0024 25.5 3.0 28 169-196 20-47 (122)
No 1
>3t90_A Glucose-6-phosphate acetyltransferase 1; GNAT fold, glcnac biosynthesis, alpha/beta protein; HET: EPE; 1.50A {Arabidopsis thaliana}
Probab=63.34 E-value=18 Score=26.49 Aligned_cols=64 Identities=13% Similarity=0.001 Sum_probs=42.8
Q ss_pred EeecCCCCCCHH-HHHHHHHHhhccCCCChhhHHH---HHHcCCCcceEEEecCCCCCCceEEEEeee
Q 023685 58 FVFFDPKPDDFH-GVKILLQTYLDDTQWDLSGFVD---LILAQTTVGTVVKMEGDDDDTPFSIVTALN 121 (278)
Q Consensus 58 Feffdp~~~Dfh-gIK~LL~qlf~~~~~dls~Lad---lIl~Q~~vGtvVK~~~dedddvfg~~SvLN 121 (278)
+.+....+.|.. .|..|+.+++....++...+.. .+...+....++-..+.+++.+.|++.+..
T Consensus 5 ~~ir~~~~~D~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~ 72 (149)
T 3t90_A 5 FKIRKLEISDKRKGFIELLGQLTVTGSVTDEEFDRRFEEIRSYGDDHVICVIEEETSGKIAATGSVMI 72 (149)
T ss_dssp EEEEECCGGGGGTTHHHHHTTTSCCCCCCHHHHHHHHHHHHTTGGGEEEEEEEETTTTEEEEEEEEEE
T ss_pred EEEEecCchhhHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHhCCCCcEEEEEEcCCCCcEEEEEEEEe
Confidence 456677888999 9999999988777788777777 455555333333332211356888888754
No 2
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=59.90 E-value=41 Score=25.00 Aligned_cols=63 Identities=10% Similarity=-0.001 Sum_probs=41.4
Q ss_pred EEeecCCCCCCHHHHHHHHHHhhccCCCChhhHHHH---HHcCCCcceEEEecCCCCCCceEEEEeee
Q 023685 57 DFVFFDPKPDDFHGVKILLQTYLDDTQWDLSGFVDL---ILAQTTVGTVVKMEGDDDDTPFSIVTALN 121 (278)
Q Consensus 57 DFeffdp~~~DfhgIK~LL~qlf~~~~~dls~Ladl---Il~Q~~vGtvVK~~~dedddvfg~~SvLN 121 (278)
.+.+....+.|+..|..|++.++....+....+.+. +..+..-..++-... ++.+.|++.+..
T Consensus 20 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~vG~~~~~~ 85 (161)
T 3i3g_A 20 DLELRVLEESDLSSHLELLGHLTEAPPLSGVELANIADMRRRAGIVTKVFCHQP--TGRIVGSASLMI 85 (161)
T ss_dssp CEEEEECCGGGHHHHHHHHTTTSCCCCCCHHHHHHHHHHHHHTTCEEEEEEETT--TTEEEEEEEEEE
T ss_pred cEEEEECcHhhHHHHHHHHHHhccCCCCCHHHHHHHHHHHhhcCCceEEEEEEc--CCCeEEEEEEEe
Confidence 456677888999999999999887767777666663 334332223333322 356888877754
No 3
>1jvr_A HTLV-II MA, MA, human T-cell leukemia virus type II matrix protein; HTLV-II matrix protein, retroviral matrix protein; NMR {Human t-lymphotropic virus 2} SCOP: a.61.1.2
Probab=58.34 E-value=7.3 Score=31.54 Aligned_cols=33 Identities=27% Similarity=0.344 Sum_probs=25.9
Q ss_pred CCCCCHHHHHHHHHHhhcc----CCCChhhHHHHHHc
Q 023685 63 PKPDDFHGVKILLQTYLDD----TQWDLSGFVDLILA 95 (278)
Q Consensus 63 p~~~DfhgIK~LL~qlf~~----~~~dls~LadlIl~ 95 (278)
|++-|||-+|++|.--+.. +.||.|=||.||=.
T Consensus 39 PS~fDFhqLr~fLklAl~TPvWlnPI~YSlLA~LiPk 75 (137)
T 1jvr_A 39 PSDFDFQQLRRFLKLALKTPIWLNPIDYSLLASLIPK 75 (137)
T ss_dssp CSTTTHHHHHHHHHHHHTCTTSTTTTCTTTHHHHSCS
T ss_pred CCcccHHHHHHHHHHHhcCcccccchhHHHHHhhccC
Confidence 5556999999999865543 78899999988754
No 4
>2l9b_B MRNA 3'-END-processing protein RNA14; 3' END mRNA maturation, transcription; NMR {Saccharomyces cerevisiae}
Probab=57.57 E-value=7.1 Score=27.11 Aligned_cols=35 Identities=14% Similarity=0.321 Sum_probs=27.2
Q ss_pred CHHHHHHHH--HHhhccCCCChhhHHHHHHcCCCcce
Q 023685 67 DFHGVKILL--QTYLDDTQWDLSGFVDLILAQTTVGT 101 (278)
Q Consensus 67 DfhgIK~LL--~qlf~~~~~dls~LadlIl~Q~~vGt 101 (278)
+--.+-.+| +|||....+|-+.|++.+..|-+|-+
T Consensus 10 eI~dLL~vLPKRQYFK~~~ld~~klv~~L~dqV~ip~ 46 (53)
T 2l9b_B 10 EVLDLLSVIPKRQYFNTNLLDAQKLVNFLNDQVEIPT 46 (53)
T ss_dssp HHHHHHHHSBCGGGGCSSCCCHHHHHHHHHHTCCCC-
T ss_pred HHHHHHHHcchHhhhcccccCHHHHHHHHHhccccCC
Confidence 333344444 79999999999999999999988654
No 5
>1cjw_A Protein (serotonin N-acetyltransferase); HET: COT; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1b6b_A
Probab=29.89 E-value=74 Score=23.19 Aligned_cols=61 Identities=10% Similarity=0.030 Sum_probs=41.4
Q ss_pred EeecCCCCCCHHHHHHHHHHhhcc----CCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeeC
Q 023685 58 FVFFDPKPDDFHGVKILLQTYLDD----TQWDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALNL 122 (278)
Q Consensus 58 Feffdp~~~DfhgIK~LL~qlf~~----~~~dls~LadlIl~Q~~vGtvVK~~~dedddvfg~~SvLNL 122 (278)
+......+.|+..|..|.+..+.. ..+....+...+...+...-++ .. ++.+.|++.+...
T Consensus 6 ~~ir~~~~~D~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~-~~---~~~ivG~~~~~~~ 70 (166)
T 1cjw_A 6 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGW-FV---EGRLVAFIIGSLW 70 (166)
T ss_dssp SEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEE-EE---TTEEEEEEEEEEE
T ss_pred eeeecCCHHHHHHHHHHHHHhCCCCcccCccCHHHHHHHHhcCCCcEEEE-EE---CCeEEEEEEeeee
Confidence 345677888999999999887643 3677888888886544333333 22 2468888877644
No 6
>2vez_A Putative glucosamine 6-phosphate acetyltransferase; acyltransferase; HET: ACO G6P; 1.45A {Aspergillus fumigatus} PDB: 2vxk_A*
Probab=29.12 E-value=1.9e+02 Score=22.20 Aligned_cols=63 Identities=5% Similarity=-0.048 Sum_probs=39.7
Q ss_pred EeecCCCCCCHHH-HHHHHHHhhccCCCChhhHHHHH---HcCCCcceEEEecCCCCCCceEEEEeee
Q 023685 58 FVFFDPKPDDFHG-VKILLQTYLDDTQWDLSGFVDLI---LAQTTVGTVVKMEGDDDDTPFSIVTALN 121 (278)
Q Consensus 58 Feffdp~~~Dfhg-IK~LL~qlf~~~~~dls~LadlI---l~Q~~vGtvVK~~~dedddvfg~~SvLN 121 (278)
+.+....+.|+.. |..|+++.+....++...+.+.+ .....-+.++-..+ +++.+.|++.+..
T Consensus 48 ~~iR~~~~~D~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~g~ivG~~~~~~ 114 (190)
T 2vez_A 48 YTIRPLCRSDYKRGYLDVLRVLTTVGDINEEQWNSRYEWIRARSDEYYLLVVCD-GEGRIVGTGSLVV 114 (190)
T ss_dssp CEEEECCGGGGGGTHHHHHTTTSCCCCCCHHHHHHHHHHHHTTTTTEEEEEEEC-TTSCEEEEEEEEE
T ss_pred eEEEeCCHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHhCCCCcEEEEEEc-CCCcEEEEEEEEe
Confidence 4456677889999 99999888766667766666543 32333233333322 2356899888654
No 7
>4fd4_A Arylalkylamine N-acetyltransferase like 5B; GNAT; 1.95A {Aedes aegypti}
Probab=27.60 E-value=84 Score=24.49 Aligned_cols=65 Identities=17% Similarity=0.115 Sum_probs=37.9
Q ss_pred EeecCCCCCCHHHHHHHHHHhhcc-CCC---------ChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeeC
Q 023685 58 FVFFDPKPDDFHGVKILLQTYLDD-TQW---------DLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALNL 122 (278)
Q Consensus 58 Feffdp~~~DfhgIK~LL~qlf~~-~~~---------dls~LadlIl~Q~~vGtvVK~~~dedddvfg~~SvLNL 122 (278)
+......++|+..|..|+.+.|.. ..+ ....+...+.....-|.++-..+.+++.+.|++.+...
T Consensus 7 i~iR~~~~~D~~~i~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~g~ivG~~~~~~~ 81 (217)
T 4fd4_A 7 IVLRVARLDELEQVREILHRIYYPEEGITISYVHGKSHTLDDERFSLSFVEQGTVVVAEDSAAKKFIGVSIAGPI 81 (217)
T ss_dssp EEEEECCGGGHHHHHHHHHHHTTTTCHHHHHBTTCSSCCHHHHHHHHTTTTTTCEEEEEETTTTEEEEEEEEEEE
T ss_pred eEEEEcCHHHHHHHHHHHHHhcCCccchhhhccCCCccHHHHHHHHHHHHHCCCeEEEEECCCCCEEEEEEeecc
Confidence 456777889999999999887632 111 12334444444332343333322234679999887554
No 8
>1pfj_A TFIIH basal transcription factor complex P62 subunit; PH/PTB domain, structural proteomics in europe, spine, structural genomics; NMR {Homo sapiens} SCOP: b.55.1.9 PDB: 2rnr_B
Probab=27.55 E-value=46 Score=26.18 Aligned_cols=28 Identities=29% Similarity=0.339 Sum_probs=23.3
Q ss_pred EEEEEeecCCCCC--CHHHHHHHHHHhhcc
Q 023685 54 VQADFVFFDPKPD--DFHGVKILLQTYLDD 81 (278)
Q Consensus 54 V~VDFeffdp~~~--DfhgIK~LL~qlf~~ 81 (278)
-+.-|-|.+|... |.++||.+|++++..
T Consensus 73 ~~~~F~Ftn~~~a~~erd~VKd~L~~~l~~ 102 (108)
T 1pfj_A 73 DTTNFHFSNESTAVKERDAVKDLLQQLLPK 102 (108)
T ss_dssp CEEEEECCCSSCTTHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCcHHHHHHHHHHHHHHHHHHHH
Confidence 3578999999753 999999999998743
No 9
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=26.02 E-value=1.9e+02 Score=21.50 Aligned_cols=56 Identities=11% Similarity=0.083 Sum_probs=34.2
Q ss_pred eecCCCCCCHHHHHHHHHHhhccCCCC--hhhHHHHHHcCCCcceEEEecCCCCCCceEEEEe
Q 023685 59 VFFDPKPDDFHGVKILLQTYLDDTQWD--LSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTA 119 (278)
Q Consensus 59 effdp~~~DfhgIK~LL~qlf~~~~~d--ls~LadlIl~Q~~vGtvVK~~~dedddvfg~~Sv 119 (278)
......+.|...|..|+++++.. ..+ ...+...+-. ......|-.. ++.+.|++.+
T Consensus 23 ~ir~~~~~D~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~v~~~---~~~~vG~~~~ 80 (166)
T 4evy_A 23 NIKPASEASLKDWLELRNKLWSD-SEASHLQEMHQLLAE-KYALQLLAYS---DHQAIAMLEA 80 (166)
T ss_dssp EEEECCGGGHHHHHHHHHHHSCC-CHHHHHHHHHHHHTC-TTEEEEEEEE---TTEEEEEEEE
T ss_pred EEEECCHHHHHHHHHHHHHHhcC-CchHHHHHHHHHhcC-CCceEEEEEE---CCeEEEEEEE
Confidence 35677888999999999998876 222 2345555444 3322233222 2458888876
No 10
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*
Probab=25.13 E-value=1.6e+02 Score=21.51 Aligned_cols=63 Identities=17% Similarity=0.174 Sum_probs=39.1
Q ss_pred EeecCCCCCCHH-HHHHHHHHhhccCCCChhhHHHHHH---cCCCcceEEEecCCCCCCceEEEEee
Q 023685 58 FVFFDPKPDDFH-GVKILLQTYLDDTQWDLSGFVDLIL---AQTTVGTVVKMEGDDDDTPFSIVTAL 120 (278)
Q Consensus 58 Feffdp~~~Dfh-gIK~LL~qlf~~~~~dls~LadlIl---~Q~~vGtvVK~~~dedddvfg~~SvL 120 (278)
+......+.|+. .+..|+.++.....++...+.+.+. ....-..++-..+.+++.+.|++++.
T Consensus 22 ~~iR~~~~~D~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ivG~~~~~ 88 (165)
T 4ag7_A 22 FKVRPLAKDDFSKGYVDLLSQLTSVGNLDQEAFEKRFEAMRTSVPNYHIVVIEDSNSQKVVASASLV 88 (165)
T ss_dssp EEEEECBGGGGTTTHHHHHHHHSCCTTCCHHHHHHHHHHHHTCSSCCEEEEEEETTTTEEEEEEEEE
T ss_pred EEEeeCCHhHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHhcCCCceEEEEEEeCCCCeEEEEEEEE
Confidence 456677888999 6999999887666677666666543 22122222222211235688988875
No 11
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=24.51 E-value=1.3e+02 Score=21.83 Aligned_cols=60 Identities=12% Similarity=0.071 Sum_probs=37.8
Q ss_pred ecCCCCCCHHHHHHHHHHhhc-------------cCCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeeeC
Q 023685 60 FFDPKPDDFHGVKILLQTYLD-------------DTQWDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALNL 122 (278)
Q Consensus 60 ffdp~~~DfhgIK~LL~qlf~-------------~~~~dls~LadlIl~Q~~vGtvVK~~~dedddvfg~~SvLNL 122 (278)
+....++|...|..|+.+.+. ...+....+...+-......-|+..+ ++.+.|++.+...
T Consensus 3 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~---~g~~vG~~~~~~~ 75 (164)
T 4e0a_A 3 IREATVQDYEEVARLHTQVHEAHVKERGDIFRSNEPTLNPSRFQAAVQGEKSTVLVFVDE---REKIGAYSVIHLV 75 (164)
T ss_dssp EEECCGGGHHHHHHHHHHHHHHHHHHCTTTBCCCSSSSCHHHHHHHHHCSSEEEEEEEEE---TTEEEEEEEEEEE
T ss_pred EEEcCccCHHHHHHHHHHHHHHHhccCCccccccchHHHHHHHHHHhcCCceEEEEEECC---CCcEEEEEEEEec
Confidence 455677899999999987652 23456667777776544333333322 1258888877543
No 12
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=24.07 E-value=1.4e+02 Score=21.78 Aligned_cols=63 Identities=11% Similarity=0.170 Sum_probs=40.1
Q ss_pred EEeecCCCCCCHHHHHHHHHHhhc------cCCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeee
Q 023685 57 DFVFFDPKPDDFHGVKILLQTYLD------DTQWDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALN 121 (278)
Q Consensus 57 DFeffdp~~~DfhgIK~LL~qlf~------~~~~dls~LadlIl~Q~~vGtvVK~~~dedddvfg~~SvLN 121 (278)
++.+....+.|+..|..|+..... ...++...+...+..+..-+.++-... ++.+.|++.+..
T Consensus 10 ~~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~vG~~~~~~ 78 (166)
T 2fe7_A 10 TLEIRPAVPADAEQILAFIIELADYERARHEVVTDVEGIRRSLFAEGSPTRALMCLS--EGRPIGYAVFFY 78 (166)
T ss_dssp -CEEEECCGGGHHHHHHHHHHHHHHTTCGGGCCCCHHHHHHHHTSTTCSEEEEEEEE--TTEEEEEEEEEE
T ss_pred ceEEEECCHHHHHHHHHHHHHHHHhhcccccCCccHHHHHHHhhcCCCCceEEEEEe--CCeEEEEEEEEe
Confidence 356777888999999999987431 234667778887755544333332321 346888887654
No 13
>1rpb_A Tricyclic peptide RP 71955; HIV replication inhibitor, replication inhibitor; NMR {Actinomycete SP9440} SCOP: j.24.1.1 PDB: 1rpc_A
Probab=23.00 E-value=11 Score=22.15 Aligned_cols=9 Identities=33% Similarity=0.885 Sum_probs=6.5
Q ss_pred CceEEEEeC
Q 023685 270 NIVVCFFWF 278 (278)
Q Consensus 270 ~~~~~~~~~ 278 (278)
.|-+||||.
T Consensus 14 gyaivcfw~ 22 (26)
T 1rpb_A 14 GYAVVCFWX 22 (26)
T ss_dssp CBBSSCCC-
T ss_pred ceEEEEEEe
Confidence 578888883
No 14
>1kux_A Aralkylamine, serotonin N-acetyltransferase; enzyme-inhibitor complex, bisubstrate analog, alternate conformations; HET: CA3; 1.80A {Ovis aries} SCOP: d.108.1.1 PDB: 1kuv_A* 1kuy_A* 1l0c_A* 1ib1_E*
Probab=22.22 E-value=1.5e+02 Score=23.04 Aligned_cols=59 Identities=10% Similarity=0.044 Sum_probs=40.0
Q ss_pred EeecCCCCCCHHHHHHHHHHhhcc----CCCChhhHHHHHHcCCCcceEEEecCCCCCCceEEEEee
Q 023685 58 FVFFDPKPDDFHGVKILLQTYLDD----TQWDLSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTAL 120 (278)
Q Consensus 58 Feffdp~~~DfhgIK~LL~qlf~~----~~~dls~LadlIl~Q~~vGtvVK~~~dedddvfg~~SvL 120 (278)
+......+.|+..|..|....|.. ..+....+.+.+-......-|+.. ++.+.|++.+.
T Consensus 35 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~ivG~~~~~ 97 (207)
T 1kux_A 35 NEFRCLTPEDAAGVFEIEREAFISVSGNCPLNLDEVQHFLTLCPELSLGWFV----EGRLVAFIIGS 97 (207)
T ss_dssp CEEECCCGGGHHHHHHHHHHHTHHHHSCCSCCHHHHHHHHHHCGGGEEEEEE----TTEEEEEEEEE
T ss_pred eEEecCCHHHHHHHHHHHHHHcCCcccccccCHHHHHHHHhhCCCeEEEEEE----CCEEEEEEEEE
Confidence 456677888999999999876643 467788888887654443333332 24588887764
No 15
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=22.06 E-value=2.4e+02 Score=20.75 Aligned_cols=66 Identities=5% Similarity=-0.009 Sum_probs=37.9
Q ss_pred EEeecCCCCCCHHHHHHHHH-----HhhccCCCC--hhhHHHHHHcCCCcceEEEec-CCCCCCceEEEEeeeC
Q 023685 57 DFVFFDPKPDDFHGVKILLQ-----TYLDDTQWD--LSGFVDLILAQTTVGTVVKME-GDDDDTPFSIVTALNL 122 (278)
Q Consensus 57 DFeffdp~~~DfhgIK~LL~-----qlf~~~~~d--ls~LadlIl~Q~~vGtvVK~~-~dedddvfg~~SvLNL 122 (278)
.+....+.++|...|..++. .++...... ...+...++.+..-+..+-+. +++++.+.|++++...
T Consensus 13 ~i~ir~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iG~~~~~~~ 86 (164)
T 3eo4_A 13 KIIIRQITDNDLELLMAWRSNPLIYKFFYIQKEPLKWEEHYSWWMSRENRVDWIILLRENNTIRKVGSVNVSQL 86 (164)
T ss_dssp EEEEEECCGGGHHHHHHHHTCHHHHTTSTTCCSCCCHHHHHHHHHHCCSCEEEEEEEEETTEEEEEEEEEEECT
T ss_pred cEEEEECCHHHHHHHHHHHcCHHHHHhccCCCCChhHHHHHHHHhcCCCCceEEEEEEecCCCcEEEEEEEEec
Confidence 35667788899999999883 233332333 336666655555432322222 0123568888877543
No 16
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=20.90 E-value=1.4e+02 Score=22.11 Aligned_cols=60 Identities=12% Similarity=0.092 Sum_probs=36.2
Q ss_pred EeecCCCCCCHHHHHHHHHHhhccCCCC--hhhHHHHHHcCCCcceEEEecCCCCCCceEEEEeee
Q 023685 58 FVFFDPKPDDFHGVKILLQTYLDDTQWD--LSGFVDLILAQTTVGTVVKMEGDDDDTPFSIVTALN 121 (278)
Q Consensus 58 Feffdp~~~DfhgIK~LL~qlf~~~~~d--ls~LadlIl~Q~~vGtvVK~~~dedddvfg~~SvLN 121 (278)
+.+....+.|...|..|+.+.+...... ...+...+-. ......|-.. ++.+.|++.+..
T Consensus 21 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~~---~~~ivG~~~~~~ 82 (165)
T 1s3z_A 21 MDIRQMNKTHLEHWRGLRKQLWPGHPDDAHLADGEEILQA-DHLASFIAMA---DGVAIGFADASI 82 (165)
T ss_dssp EEEEECCGGGHHHHHHHHHHHSTTSCHHHHHHHHHHHHHC-SSEEEEEEEE---TTEEEEEEEEEE
T ss_pred EEEEeCchhhHHHHHHHHHHHhccCCcHHHHHHHHHHhcC-CCceEEEEEE---CCEEEEEEEEEe
Confidence 4456677889999999999988654322 1335555443 3222222222 246888888765
No 17
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=20.07 E-value=71 Score=25.48 Aligned_cols=28 Identities=18% Similarity=0.262 Sum_probs=25.9
Q ss_pred cccCCCchhhHHHHHHHHHHHHHhhhcC
Q 023685 169 RVVNLPPQLLPPLHDALFDEVSWATEDE 196 (278)
Q Consensus 169 R~iN~P~ql~ppL~~~L~eEi~~A~e~~ 196 (278)
||..+|.+.+-.+=+.|.+++....+..
T Consensus 20 r~rgi~~e~v~~lS~~Lid~La~i~~~~ 47 (122)
T 1u9d_A 20 RFRAVEAHIVESLVPTLLNELSSLLSTA 47 (122)
T ss_dssp EEESSCHHHHHHHHHHHHHHHHHHHTCC
T ss_pred EECCCCHHHHHHHhHHHHHHHHHHHCCC
Confidence 7899999999999999999999998764
Done!