BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023686
(278 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O74545|YCV6_SCHPO Putative hydrolase C777.06c OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=SPCC777.06c PE=4 SV=1
Length = 301
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/289 (38%), Positives = 165/289 (57%), Gaps = 23/289 (7%)
Query: 1 MGTGTSEGIPRVSCLTNPSKKCPVCTKAVEP-GNKNRRLNTSILIRYPGPSGRR--NILI 57
MGTG S GIP V CLT C C ++ P G KN R NTS+L++ SG R NILI
Sbjct: 11 MGTGCSSGIPNVCCLTLEKPTCRTCLASLTPEGRKNNRFNTSVLLQVDDGSGDRPKNILI 70
Query: 58 DAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWT-NNVQRHIPIYVAMR 116
D GK FY SAL+ F + IR +DAVI+TH HADAI G+DDLR+WT +Q + IY+ R
Sbjct: 71 DCGKHFYVSALKHFVEHKIRYLDAVILTHDHADAINGMDDLREWTLGFLQPSVKIYLTER 130
Query: 117 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNIID-EEPFTVQDLKI--TPLPVWHGA---- 169
++V++++ Y+V+ G +V F++ ++PF + D+ I TPLPV HG
Sbjct: 131 TYKVIERSFPYMVNAKNATGGGSVPTFDFHVFSPDKPFKLDDIDISVTPLPVHHGVYFIE 190
Query: 170 -----GYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRA 224
Y +GFR G++ YISD + +P T ++ ++++DAL+ + S HF +A
Sbjct: 191 GKESQTYFCMGFRVGDMSYISDCNYVPPTTKKLMEGSNVVVVDALKHEPYPS-HFSFKQA 249
Query: 225 LEEVRKIQ--PKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDG 271
E + ++ P R L+ G H ++H + +EL L + + +YDG
Sbjct: 250 EEFIASLEHVPSRVLYTGFSHKVEHNETVKELSVLK----VPTEPAYDG 294
>sp|Q7MUY1|LIPB_PORGI Octanoyltransferase OS=Porphyromonas gingivalis (strain ATCC
BAA-308 / W83) GN=lipB PE=3 SV=1
Length = 492
Score = 108 bits (270), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 81/276 (29%), Positives = 138/276 (50%), Gaps = 27/276 (9%)
Query: 1 MGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAG 60
+G+GTS G+P V C C VC ++R TS+LI +G+R ILID
Sbjct: 6 LGSGTSTGVPEVGC------HCRVCRSE---DRHDKRTRTSLLI--ITDAGKR-ILIDCS 53
Query: 61 KFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEV 120
F AL GI ++DAV++TH H D +GGLDDLR T R + +Y +
Sbjct: 54 PDFRQQAL----FAGIDSLDAVLLTHEHFDHVGGLDDLR--TICWHRELAVYAEQNVLDS 107
Query: 121 MKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGN 180
++ +Y+ + PG + +L + + PF V DL + PL + HG LG++ G
Sbjct: 108 IRDRLHYVFRKNP-YPGTPLLKL-CEVKPDMPFQVADLTVEPLRIMHGR-LPILGYKIGE 164
Query: 181 ICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIG 240
+ +++D+ +I E L+ C +L ++ LR + +H + +A++ + +I ++ I
Sbjct: 165 MAFLTDMKDIAAEEIECLKSCRLLFINGLRYRKEHPSHQTIEQAIDTIGQIGNPESVLI- 223
Query: 241 MMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 276
HL H +++E L+++ + YDGL +
Sbjct: 224 --HLSHHAPLHQEHLEILPPH---IHSGYDGLEAII 254
>sp|P16692|PHNP_ECOLI Protein PhnP OS=Escherichia coli (strain K12) GN=phnP PE=1 SV=1
Length = 252
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 120/284 (42%), Gaps = 58/284 (20%)
Query: 6 SEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYH 65
++G+P C +C C +A + RR S ++++ LIDAG +
Sbjct: 13 AQGVPAWGC------ECAACARARR-SPQYRRQPCSGVVKF----NDAITLIDAG--LHD 59
Query: 66 SALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF---EVMK 122
A RW P + ++TH H D + GL LR W V IP+Y + ++ K
Sbjct: 60 LADRWSPG----SFQQFLLTHYHMDHVQGLFPLR-W--GVGDPIPVYGPPDEQGCDDLFK 112
Query: 123 KTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTV---QDLKITPLPVWHGA---GYRSLGF 176
H L+D S + EPF V Q L++TPLP+ H GY L
Sbjct: 113 --HPGLLDFSHTV---------------EPFVVFDLQGLQVTPLPLNHSKLTFGYL-LET 154
Query: 177 RFGNICYISDVSEIPEETYPFLQDC--EILIMDALRPDRSSS--THFGLPRALEEVRKIQ 232
+ ++SD + +PE+T FL++ ++++MD P R+ + H L L + I+
Sbjct: 155 AHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQVIR 214
Query: 233 PKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 276
R + + H D + L E + +DG+ + V
Sbjct: 215 SPRVILTHISHQFDAWLMENALPSGFE-------VGFDGMEIGV 251
>sp|Q95Q18|LACB2_CAEEL Beta-lactamase-like protein 2 homolog OS=Caenorhabditis elegans
GN=Y53F4B.39 PE=3 SV=1
Length = 295
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 17/114 (14%)
Query: 29 VEPGNKNRRLNTSILIRYPGP------------SGRRNILIDAGK---FFYHSALRWFPA 73
VEP K T IL PGP +G + IL+D G+ Y SAL+ A
Sbjct: 7 VEPIEKLSDAVTRILGHNPGPFTLQGTNTYLLGTGAKKILVDTGEPNVTEYISALKSVLA 66
Query: 74 YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDF-EVMKKTHY 126
I+ ++ITH H D +GG+D++ D + ++ IPIY RD E +++ HY
Sbjct: 67 STNSHIEYIVITHWHGDHVGGIDNITDEILD-KKKIPIYKMKRDKDEGVERFHY 119
>sp|A8MGK0|RNZ_ALKOO Ribonuclease Z OS=Alkaliphilus oremlandii (strain OhILAs) GN=rnz
PE=3 SV=1
Length = 317
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Query: 40 TSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 99
+S++I Y G R IL+D G+ A+R A G ++ID + ITH H D I G+ L
Sbjct: 21 SSLMINYKG----RKILVDCGEG-TQVAIRKMNA-GFKSIDIICITHVHGDHIFGIPGLL 74
Query: 100 DWTNNVQRHIPIYVA 114
N QR P+ +
Sbjct: 75 STMGNSQRLDPVTIV 89
>sp|O07607|YHFI_BACSU Uncharacterized protein YhfI OS=Bacillus subtilis (strain 168)
GN=yhfI PE=4 SV=1
Length = 244
Score = 40.0 bits (92), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/223 (21%), Positives = 84/223 (37%), Gaps = 27/223 (12%)
Query: 50 SGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR------DWTN 103
SG ++L+D G + PA +DAV+++H H D I + L+ +
Sbjct: 26 SGDYSLLVDCGSAVLSKLFGYVPA---EKLDAVVLSHYHHDHIADIGPLQFAKQVGSFLG 82
Query: 104 NVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPL 163
+ +PIY D E +K Y T GI ++P T IT L
Sbjct: 83 KGEHTLPIYGHDADIEQFQKL-TYKTHTKGIA-----------YQPDQPLTAGPFTITFL 130
Query: 164 PVWHGAGYRSLGFRFGN--ICYISDVSEIPEETYPFLQDCEILIMDA---LRPDRSSSTH 218
H ++ G+ + Y +D S + PF +D ++LI + D +S+ H
Sbjct: 131 KTIHPVTCYAMRITDGSHTVVYTAD-SSYQDSFIPFSKDADLLISECNFYADQDGTSAGH 189
Query: 219 FGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETE 261
A ++ L + H H+ + +E + E
Sbjct: 190 MNSLEAGRIAKEAGAGELLLTHLPHFGVHDNLRKEAKTVFNGE 232
>sp|B2S457|RNZ_TREPS Ribonuclease Z OS=Treponema pallidum subsp. pallidum (strain SS14)
GN=rnz PE=3 SV=1
Length = 310
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 40 TSILIRYPGPSGRRNILIDAGKFFYHS----ALRWFPAYGIRTIDAVIITHSHADAIGGL 95
TS+L+R G L DAG+ S +LRW + I A+ I+H+HAD I GL
Sbjct: 24 TSVLLRREG----ELFLFDAGEGTQVSLRRLSLRW------KKISAIFISHTHADHITGL 73
Query: 96 DDLRDWTNNVQRHIPIYV 113
L ++ V R P+Y+
Sbjct: 74 PGLLMLSSQVARSEPLYI 91
>sp|O07896|RNZ_TREPA Ribonuclease Z OS=Treponema pallidum (strain Nichols) GN=rnz PE=3
SV=1
Length = 310
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 40/78 (51%), Gaps = 14/78 (17%)
Query: 40 TSILIRYPGPSGRRNILIDAGKFFYHS----ALRWFPAYGIRTIDAVIITHSHADAIGGL 95
TS+L+R G L DAG+ S +LRW + I A+ I+H+HAD I GL
Sbjct: 24 TSVLLRREG----ELFLFDAGEGTQVSLRRLSLRW------KKISAIFISHTHADHITGL 73
Query: 96 DDLRDWTNNVQRHIPIYV 113
L ++ V R P+Y+
Sbjct: 74 PGLLMLSSQVARSEPLYI 91
>sp|Q97IQ6|RNZ_CLOAB Ribonuclease Z OS=Clostridium acetobutylicum (strain ATCC 824 / DSM
792 / JCM 1419 / LMG 5710 / VKM B-1787) GN=rnz PE=3 SV=2
Length = 309
Score = 39.7 bits (91), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 66/146 (45%), Gaps = 20/146 (13%)
Query: 40 TSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 99
TS+LI Y G R ILID G+ S A+G + ID + TH HAD + GL L
Sbjct: 21 TSLLISYNG----RKILIDCGEGTQVSMKEI--AWGFKDIDVICFTHYHADHVMGLTGLL 74
Query: 100 DWTNNVQRHIPIYV----AMRDFEVMKKTH----YYLVDTSGIIPGAAVSELQFNIIDEE 151
N R P+ + +R EV+K ++ + I + S+ N +D +
Sbjct: 75 LTIANSGRIDPLTIIGPEGLR--EVVKGLTVVAPFFPYEIELIELDSKCSD---NFLD-K 128
Query: 152 PFTVQDLKITPLPVWHGAGYRSLGFR 177
F ++D++I LPV H S R
Sbjct: 129 VFKIEDVEIFALPVDHSIECLSYSVR 154
>sp|A1S6T3|GLO2_SHEAM Hydroxyacylglutathione hydrolase OS=Shewanella amazonensis (strain
ATCC BAA-1098 / SB2B) GN=gloB PE=3 SV=1
Length = 258
Score = 38.1 bits (87), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 41/84 (48%), Gaps = 10/84 (11%)
Query: 79 IDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM-RDFEVMKKTHYYLVDTSGI--- 134
+ AV++TH H D GG++ LRDW + + +Y A+ D+ + VD SG+
Sbjct: 47 LTAVLLTHHHRDHNGGINQLRDWAKSNGQSFTVYGAVTSDYSDVLCRDGDTVDISGLTSP 106
Query: 135 -----IPGAAVSELQFNIIDEEPF 153
+PG + L F ++D F
Sbjct: 107 VRVLSVPGHTLDHLAF-VVDNALF 129
>sp|Q73LB4|RNZ_TREDE Ribonuclease Z OS=Treponema denticola (strain ATCC 35405 / CIP
103919 / DSM 14222) GN=rnz PE=3 SV=1
Length = 308
Score = 37.7 bits (86), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 14/78 (17%)
Query: 40 TSILIRYPGPSGRRNILIDAGK----FFYHSALRWFPAYGIRTIDAVIITHSHADAIGGL 95
TS+L+R G L D G+ LRW + I+A+ I+H+HAD I GL
Sbjct: 22 TSVLLRREGDL----FLFDCGEGTQVALRRLNLRW------KRINAIFISHTHADHITGL 71
Query: 96 DDLRDWTNNVQRHIPIYV 113
L ++ V R P+Y+
Sbjct: 72 PGLLMLSSQVDREEPLYI 89
>sp|Q0TQN4|RNZ_CLOP1 Ribonuclease Z OS=Clostridium perfringens (strain ATCC 13124 / NCTC
8237 / Type A) GN=rnz PE=3 SV=1
Length = 316
Score = 37.7 bits (86), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 85/189 (44%), Gaps = 22/189 (11%)
Query: 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 96
R +S+++ + G R IL+D G+ +R G ++ID + I+H H D I GL
Sbjct: 18 RFLSSVVMNFKG----RKILLDCGEG-TQVTMR-VNGTGFKSIDIICISHLHGDHIYGLP 71
Query: 97 DLRDWTNNVQRHIPIYV----AMRD-FEVMKKTHYYLVDTSGIIPGAA-----VSELQFN 146
L N R IY+ +++ E T YL I+ A+ V + +
Sbjct: 72 GLLSTIGNSGRVEDIYIIGPKGIKEVIEGFLITLPYLPYKLNILEDASNLEFMVKKEKME 131
Query: 147 IIDEEPFTVQDLKITPLPVWHGA---GYRSLGFRFGNICYISD--VSEIPEETYPFLQDC 201
+++E+ DL I L + H + GY S R G + ++++P+E + LQ
Sbjct: 132 LVEEDEKISSDLSIKTLELDHSSPCLGY-SFNIRRGRKFNLEKALMNKVPKEVWSKLQRN 190
Query: 202 EILIMDALR 210
E + ++ ++
Sbjct: 191 EEVSLNGVK 199
>sp|Q8U053|Y1764_PYRFU UPF0173 metal-dependent hydrolase PF1764 OS=Pyrococcus furiosus
(strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1)
GN=PF1764 PE=3 SV=1
Length = 225
Score = 37.0 bits (84), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 80/196 (40%), Gaps = 33/196 (16%)
Query: 51 GRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIP 110
G + ILID F + + +++D +++TH+H D +G D +R
Sbjct: 16 GSKKILIDP--FLSGNPVASAKPDDFKSVDLILVTHAHGDHLG------DVGTIAKRTGA 67
Query: 111 IYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGA- 169
VAM D Y V+T G+ G P V +++I +P WH +
Sbjct: 68 KVVAMYDLANYIAEKYKGVETIGMNYG--------------PTKVDEVEIVQVPAWHSSS 113
Query: 170 -GYRSLGFRFGNICYISDVSEI-PEETYPFLQDCEIL------IMDALRPDRSSSTHFGL 221
G S+G G I + V+ +TY F +D E+ I AL P T G+
Sbjct: 114 DGKYSIGNACGYIVKLDGVTIYHAGDTYVF-KDMELFAELYGPIDVALLPIGGHFT-MGV 171
Query: 222 PRALEEVRKIQPKRTL 237
A + V ++P+ +
Sbjct: 172 REAAKAVELLKPRHVI 187
>sp|A5MZX7|RNZ_CLOK5 Ribonuclease Z OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555
/ NCIMB 10680) GN=rnz PE=3 SV=1
Length = 303
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 40 TSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 99
T++++ Y G R +LID G+ +L+ + IR ID ++ TH HAD I GL L
Sbjct: 21 TAMIVSYQG----RKLLIDCGEG-TQVSLKIL-GWKIRNIDVILFTHFHADHIAGLPGLL 74
Query: 100 DWTNNVQRHIPIYV 113
N R PI +
Sbjct: 75 LTIANSGRLEPITI 88
>sp|B9E3V3|RNZ_CLOK1 Ribonuclease Z OS=Clostridium kluyveri (strain NBRC 12016) GN=rnz
PE=3 SV=1
Length = 303
Score = 37.0 bits (84), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 6/74 (8%)
Query: 40 TSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 99
T++++ Y G R +LID G+ +L+ + IR ID ++ TH HAD I GL L
Sbjct: 21 TAMIVSYQG----RKLLIDCGEG-TQVSLKIL-GWKIRNIDVILFTHFHADHIAGLPGLL 74
Query: 100 DWTNNVQRHIPIYV 113
N R PI +
Sbjct: 75 LTIANSGRLEPITI 88
>sp|A4XU09|GLO2_PSEMY Hydroxyacylglutathione hydrolase OS=Pseudomonas mendocina (strain
ymp) GN=gloB PE=3 SV=1
Length = 257
Score = 37.0 bits (84), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 49 PSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWT 102
P RR ++D G L W A+G T+ ++ITH H D +GG++ L+ T
Sbjct: 21 PISRRCAVVDPGD--AAPVLAWLEAHGDWTLSDILITHHHFDHVGGVEQLKKAT 72
>sp|A6LU82|RNZ_CLOB8 Ribonuclease Z OS=Clostridium beijerinckii (strain ATCC 51743 /
NCIMB 8052) GN=rnz PE=3 SV=1
Length = 308
Score = 35.4 bits (80), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 6/77 (7%)
Query: 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 96
R ++ LI Y G R IL+D G+ ++R G ++ID + ITH H D I GL
Sbjct: 18 RFLSATLINYRG----RKILVDCGEG-TQVSMR-ISNTGFKSIDIICITHIHGDHIVGLP 71
Query: 97 DLRDWTNNVQRHIPIYV 113
L N R PI +
Sbjct: 72 GLLGTIGNSGRTEPITI 88
>sp|Q5SLP1|RNSE_THET8 Ribonuclease TTHA0252 OS=Thermus thermophilus (strain HB8 / ATCC
27634 / DSM 579) GN=TTHA0252 PE=1 SV=1
Length = 431
Score = 35.4 bits (80), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 50 SGRRNILIDAGKFFYHSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDL 98
+G R +L+D G F R +G + +DAV++TH+H D +G L L
Sbjct: 21 AGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKL 71
>sp|Q6NYF0|LACB2_DANRE Beta-lactamase-like protein 2 OS=Danio rerio GN=lactb2 PE=2 SV=1
Length = 289
Score = 35.4 bits (80), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 43/93 (46%), Gaps = 11/93 (11%)
Query: 9 IPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFF---YH 65
IPR+ L+ + C PG + + L+ +GRR +LIDAG+ Y
Sbjct: 5 IPRIEQLSARVVRVLGCN----PGPMTLQGTNTYLV----GTGRRRVLIDAGERAVPEYI 56
Query: 66 SALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 98
+LR +I +I+TH H D GG+ D+
Sbjct: 57 VSLREALKQHDTSIQHIIVTHWHHDHTGGVQDI 89
>sp|C4Z309|RNZ_EUBE2 Ribonuclease Z OS=Eubacterium eligens (strain ATCC 27750 / VPI
C15-48) GN=rnz PE=3 SV=1
Length = 304
Score = 35.0 bits (79), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 65/158 (41%), Gaps = 33/158 (20%)
Query: 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 96
R TS++ RY G S ++ID G+ + + + ID + TH HAD I GL
Sbjct: 18 RWLTSLMTRYNGSS----LMIDCGEGTQIAVKQ--KGWSFNPIDVICFTHYHADHISGLP 71
Query: 97 DLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQ 156
L N R P+ LV G+ G VS L+ I E PF ++
Sbjct: 72 GLLLTIGNSDRKKPL---------------TLVGPKGL--GRVVSSLRV-IAPELPFELK 113
Query: 157 DLKITP----LPVWHGAGYRSLGFRFGN--ICYISDVS 188
+++T L + GY FR + ICY +S
Sbjct: 114 FIELTNQQEHLSI---CGYEIDAFRVNHAVICYGYSIS 148
>sp|Q892B5|RNZ_CLOTE Ribonuclease Z OS=Clostridium tetani (strain Massachusetts / E88)
GN=rnz PE=3 SV=2
Length = 312
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Query: 36 RRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGL 95
R L+ +IL Y G R ILID G+ S G + ID + ITH H D I GL
Sbjct: 18 RNLSAAIL-NYKG----RKILIDCGEGTQVSM--KISKTGFKNIDIICITHWHGDHIVGL 70
Query: 96 DDLRDWTNNVQRHIPIYV 113
L N R P+ +
Sbjct: 71 PGLLATMGNSGRKEPLTI 88
>sp|Q182M7|RNZ_CLOD6 Ribonuclease Z OS=Clostridium difficile (strain 630) GN=rnz PE=3
SV=1
Length = 305
Score = 34.7 bits (78), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 31/71 (43%), Gaps = 6/71 (8%)
Query: 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 96
R +S+ I Y G R ILID G+ S G + ID + ITH H D I GL
Sbjct: 18 RFLSSVFINYKG----RKILIDCGEGTQVSM--KLKKCGFKDIDLICITHLHGDHIFGLL 71
Query: 97 DLRDWTNNVQR 107
L N R
Sbjct: 72 GLLSTIGNSGR 82
>sp|Q54YL3|INT11_DICDI Integrator complex subunit 11 homolog OS=Dictyostelium discoideum
GN=ints11 PE=3 SV=1
Length = 744
Score = 34.7 bits (78), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 51 GRRNILIDAGKFFYHSALRWFPAYG--------IRTIDAVIITHSHADAIGGL 95
G +NI+ D G + R FP + + ID VIITH H D G L
Sbjct: 24 GNKNIMFDCGMHMGMNDARRFPDFSYISKNGQFTKVIDCVIITHFHLDHCGAL 76
>sp|Q0ST77|RNZ_CLOPS Ribonuclease Z OS=Clostridium perfringens (strain SM101 / Type A)
GN=rnz PE=3 SV=1
Length = 316
Score = 34.7 bits (78), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 86/194 (44%), Gaps = 32/194 (16%)
Query: 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 96
R +S+++ + G R IL+D G+ ++R G ++ID + I+H H D I GL
Sbjct: 18 RFLSSVVMNFKG----RKILLDCGEG-TQVSMR-VNGTGFKSIDIICISHLHGDHIYGLP 71
Query: 97 DLRDWTNNVQRHIPIYV--------AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII 148
L N R IY+ + F + T YL I+ VS+L+F +
Sbjct: 72 GLLSTIGNSGRVEEIYIIGPKGIKEVIDGFLI---TLPYLPYKLNIL--EDVSDLEFMVK 126
Query: 149 DEEPFTVQ-------DLKITPLPVWHGA---GYRSLGFRFGNICYISD--VSEIPEETYP 196
E+ V+ DL I L + H + GY S R G + ++++P+E +
Sbjct: 127 KEKMELVELNEKISSDLSIKTLELDHSSPCLGY-SFNIRRGRKFNVEKALMNKVPKEVWS 185
Query: 197 FLQDCEILIMDALR 210
LQ E + ++ ++
Sbjct: 186 KLQRNEEVSLNRVK 199
>sp|O13794|YSH1_SCHPO Endoribonuclease ysh1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ysh1 PE=3 SV=2
Length = 757
Score = 34.3 bits (77), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 7/64 (10%)
Query: 43 LIRYPGPSGRRNILIDAG---KFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLR 99
+I+Y G + +++DAG + SAL +F + + T+D ++I+H H D + L +
Sbjct: 36 VIQYKG----KTVMLDAGVHPAYTGLSALPFFDEFDLSTVDVLLISHFHLDHVASLPYVM 91
Query: 100 DWTN 103
TN
Sbjct: 92 QKTN 95
>sp|Q8XKN1|RNZ_CLOPE Ribonuclease Z OS=Clostridium perfringens (strain 13 / Type A)
GN=rnz PE=3 SV=1
Length = 316
Score = 34.3 bits (77), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 86/191 (45%), Gaps = 26/191 (13%)
Query: 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLD 96
R +S+++ + G R IL+D G+ ++R G ++ID + I+H H D I GL
Sbjct: 18 RFLSSVVMNFNG----RKILLDCGEG-TQVSMR-VNGTGFKSIDIICISHLHGDHIYGLP 71
Query: 97 DLRDWTNNVQRHIPIYV----AMRD-FEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEE 151
L N R IY+ +++ E T YL I+ A S L+F + E+
Sbjct: 72 GLLSTIGNSGRVEDIYIIGPNGIKEVIEGFLITLPYLPYKLNILEDA--SNLEFMVKKEK 129
Query: 152 PFTVQ-------DLKITPLPVWHGA---GYRSLGFRFGNICYISD--VSEIPEETYPFLQ 199
V+ DL I L + H + GY S R G + ++++P+E + LQ
Sbjct: 130 IELVELNEKISSDLTIETLGLDHSSPCLGY-SFNIRRGRKFNVEKALMNKVPKELWSKLQ 188
Query: 200 DCEILIMDALR 210
E + ++ ++
Sbjct: 189 RNEEVSLNGVK 199
>sp|C4ZFN9|RNZ_EUBR3 Ribonuclease Z OS=Eubacterium rectale (strain ATCC 33656 / VPI
0990) GN=rnz PE=3 SV=1
Length = 303
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 40/79 (50%), Gaps = 7/79 (8%)
Query: 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGG 94
NR L T++ ++Y G NILID G+ A++ + ID + ITH HAD I G
Sbjct: 17 NRWL-TALSLKYNG----SNILIDCGEG-TQIAMKE-AGINFKPIDILCITHFHADHISG 69
Query: 95 LDDLRDWTNNVQRHIPIYV 113
L L N +R P+ +
Sbjct: 70 LPGLLLTMGNAERTEPLTI 88
>sp|B6YXJ1|Y1314_THEON UPF0173 metal-dependent hydrolase TON_1314 OS=Thermococcus
onnurineus (strain NA1) GN=TON_1314 PE=3 SV=1
Length = 224
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 70/169 (41%), Gaps = 35/169 (20%)
Query: 80 DAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAA 139
D ++ITH+H D IG D +R VAM D YLV+ + PG
Sbjct: 42 DLILITHAHGDHIG------DAVEIAKRTGAKIVAMYDIA------NYLVENN---PGIT 86
Query: 140 VSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFGNIC-YISDVSEI----PEET 194
+ + P V +KI +P WH + + GN C Y+ ++ + +T
Sbjct: 87 TIGMNYG-----PTEVDGVKIVQVPAWHSSSDGK--YSIGNACGYVIELDGVKIYHAGDT 139
Query: 195 YPFLQDCEIL------IMDALRPDRSSSTHFGLPRALEEVRKIQPKRTL 237
+ F +D E+L I AL P T G A + V ++P++ +
Sbjct: 140 FVF-KDMELLNELYGPIDLALLPIGGHFT-MGPKEAAKAVELLKPRKVV 186
>sp|Q4WRC2|YSH1_ASPFU Endoribonuclease ysh1 OS=Neosartorya fumigata (strain ATCC MYA-4609
/ Af293 / CBS 101355 / FGSC A1100) GN=ysh1 PE=3 SV=1
Length = 872
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 70/178 (39%), Gaps = 31/178 (17%)
Query: 32 GNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYH---SALRWFPAYGIRTIDAVIITHSH 88
G N + +I+Y G + +++DAG SAL +F + + T+D ++I+H H
Sbjct: 31 GGGNEVGRSCHIIQYKG----KTVMLDAGMHPAKEGFSALPFFDEFDLSTVDILLISHFH 86
Query: 89 ADAIGGLDDLRDWTN--------NVQRHIPIYVAMRDFEV--------MKKTHYYLVDTS 132
D L + TN + + I ++ + V + T Y D
Sbjct: 87 VDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVSNTASSSDQRTTLYTEHDHL 146
Query: 133 GIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWH--GAGYRSLGFRFGNICYISDVS 188
+P + + FN TV ++ITP P H GA + NI + D S
Sbjct: 147 STLP--LIETIDFNTT----HTVNSIRITPFPAGHVLGAAMFLISIAGLNILFTGDYS 198
>sp|Q9M9Q6|SCP50_ARATH Serine carboxypeptidase-like 50 OS=Arabidopsis thaliana GN=SCPL50
PE=2 SV=1
Length = 444
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Query: 198 LQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKL 257
++C + D LR D S F + ALE + + L+ GM+ L D EE +K
Sbjct: 305 FEECSDEVEDVLRADVMKSVKFMVEYALERTQVL-----LYQGMLDLRDGVVSTEEWMKT 359
Query: 258 METEGL 263
M GL
Sbjct: 360 MNWSGL 365
>sp|Q0C639|HIS4_HYPNA 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Hyphomonas
neptunium (strain ATCC 15444) GN=hisA PE=3 SV=1
Length = 241
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 9/58 (15%)
Query: 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRS 173
R F M TH ++VD +G GA V+ I LK TP PV G G R+
Sbjct: 39 RAFHAMGFTHLHVVDLNGAFAGAPVNRAAVEGI---------LKATPAPVQLGGGIRT 87
>sp|B2V377|RNZ_CLOBA Ribonuclease Z OS=Clostridium botulinum (strain Alaska E43 / Type
E3) GN=rnz PE=3 SV=1
Length = 315
Score = 33.9 bits (76), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 28/55 (50%), Gaps = 2/55 (3%)
Query: 53 RNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQR 107
R ILID G+ A+R +G ++ID + ITHSH D GL L N R
Sbjct: 30 RKILIDCGEG-TQVAMREI-GWGFKSIDLICITHSHGDHTIGLPGLLSTMGNSGR 82
>sp|P10425|BLA2_BAC17 Beta-lactamase 2 OS=Bacillus sp. (strain 170) PE=1 SV=1
Length = 257
Score = 33.5 bits (75), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 6/50 (12%)
Query: 77 RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHY 126
+ + VIITH+HAD IGG+ L++ R I + E+ KK+ Y
Sbjct: 107 KRVTDVIITHAHADRIGGITALKE------RGIKAHSTALTAELAKKSGY 150
>sp|P04190|BLA2_BACCE Beta-lactamase 2 OS=Bacillus cereus GN=blm PE=1 SV=1
Length = 257
Score = 33.1 bits (74), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 77 RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHY 126
+ + VIITH+HAD IGG+ L+ +R I + E+ KK Y
Sbjct: 107 KRVTDVIITHAHADRIGGIKTLK------ERGIKAHSTALTAELAKKNGY 150
>sp|P14488|BLAB_BACCE Beta-lactamase 2 OS=Bacillus cereus PE=1 SV=1
Length = 256
Score = 33.1 bits (74), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 6/50 (12%)
Query: 77 RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHY 126
+ + VIITH+HAD IGG+ L+ +R I + E+ KK Y
Sbjct: 106 KRVTDVIITHAHADRIGGMKTLK------ERGIKAHSTALTAELAKKNGY 149
>sp|Q12MM2|GLO2_SHEDO Hydroxyacylglutathione hydrolase OS=Shewanella denitrificans
(strain OS217 / ATCC BAA-1090 / DSM 15013) GN=gloB PE=3
SV=1
Length = 258
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%), Gaps = 3/34 (8%)
Query: 79 IDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIY 112
+ V+ITH HAD +GG+ L+D+ Q +P+Y
Sbjct: 48 LAGVLITHKHADHVGGIQGLQDF---YQNSLPVY 78
>sp|Q3AYI2|GLO2_SYNS9 Hydroxyacylglutathione hydrolase OS=Synechococcus sp. (strain
CC9902) GN=gloB PE=3 SV=1
Length = 251
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%), Gaps = 2/34 (5%)
Query: 69 RWFPAYGIRTIDAVIITHSHADAIGGLDD-LRDW 101
+W A+G+ + A++ TH HAD IGG D LR+W
Sbjct: 38 QWLNAHGM-CLRAILQTHHHADHIGGTPDLLREW 70
>sp|Q5XGR8|LACB2_XENLA Beta-lactamase-like protein 2 OS=Xenopus laevis GN=lactb2 PE=2
SV=1
Length = 287
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 50 SGRRNILIDAGKFF---YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 98
+G R ILID G+ Y S L+ +I +I+TH H D +GG+ D+
Sbjct: 39 TGSRRILIDTGEPAVPEYISCLKQALIEFNTSIQEIIVTHWHVDHVGGIADI 90
>sp|Q5BEP0|YSH1_EMENI Endoribonuclease ysh1 OS=Emericella nidulans (strain FGSC A4 / ATCC
38163 / CBS 112.46 / NRRL 194 / M139) GN=ysh1 PE=3 SV=1
Length = 884
Score = 32.7 bits (73), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 70/178 (39%), Gaps = 31/178 (17%)
Query: 32 GNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYH---SALRWFPAYGIRTIDAVIITHSH 88
G N + +I+Y G + +++DAG SAL +F + + T+D ++I+H H
Sbjct: 30 GGGNEVGRSCHIIQYKG----KTVMLDAGMHPAKEGFSALPFFDEFDLSTVDILLISHFH 85
Query: 89 ADAIGGLDDLRDWTN--------NVQRHIPIYVAMRDFEV--------MKKTHYYLVDTS 132
D L + TN + + I ++ + V + T Y D
Sbjct: 86 VDHSSALPYVLSKTNFKGRVFMTHATKAIYKWLIQDNVRVNNTASSSDQRTTLYTEHDHL 145
Query: 133 GIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWH--GAGYRSLGFRFGNICYISDVS 188
+P + + FN T+ ++ITP P H GA + NI + D S
Sbjct: 146 STLP--LIETIDFNTT----HTINSIRITPYPAGHVLGAAMFLISIAGLNILFTGDYS 197
>sp|A2C7W3|GLO2_PROM3 Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain
MIT 9303) GN=gloB PE=3 SV=1
Length = 260
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 78 TIDAVIITHSHADAIGG-LDDLRDWTN 103
++ AV+ TH HAD IGG L+ LRDW N
Sbjct: 58 SLAAVLQTHHHADHIGGTLELLRDWPN 84
>sp|P52699|BLAB_SERMA Beta-lactamase IMP-1 OS=Serratia marcescens PE=1 SV=1
Length = 246
Score = 32.7 bits (73), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 68 LRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKK 123
+ WF G + I I +H H+D+ GG+ +W N+ R IP Y + E++KK
Sbjct: 78 VTWFVERGYK-IKGSISSHFHSDSTGGI----EWLNS--RSIPTYASELTNELLKK 126
>sp|Q7V6G8|GLO2_PROMM Hydroxyacylglutathione hydrolase OS=Prochlorococcus marinus (strain
MIT 9313) GN=gloB PE=3 SV=1
Length = 260
Score = 32.7 bits (73), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 16/27 (59%), Positives = 20/27 (74%), Gaps = 1/27 (3%)
Query: 78 TIDAVIITHSHADAIGG-LDDLRDWTN 103
++ AV+ TH HAD IGG L+ LRDW N
Sbjct: 58 SLAAVLQTHHHADHIGGTLELLRDWPN 84
>sp|Q0V9A9|LACB2_XENTR Beta-lactamase-like protein 2 OS=Xenopus tropicalis GN=lactb2
PE=2 SV=1
Length = 289
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 50 SGRRNILIDAGKFF---YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 98
+G R ILID G+ Y S L+ +I +I+TH H D +GG+ D+
Sbjct: 39 TGPRRILIDTGEPAVPEYISCLKQALTEFNTSIQEIIVTHWHVDHVGGIADI 90
>sp|B9KYQ3|RNZ_THERP Ribonuclease Z OS=Thermomicrobium roseum (strain ATCC 27502 / DSM
5159 / P-2) GN=rnz PE=3 SV=1
Length = 303
Score = 32.3 bits (72), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 38/78 (48%), Gaps = 8/78 (10%)
Query: 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRW-FPAYGIRTIDAVIITHSHADAIGGL 95
R +++L+R G +L+D G+ + + W + + R +DA++ TH HAD + GL
Sbjct: 18 RWLSALLVRCEG----HVVLLDCGE---GTQISWRYTGWSFRDLDAIVFTHLHADHVAGL 70
Query: 96 DDLRDWTNNVQRHIPIYV 113
+ R P+ +
Sbjct: 71 PGILYALAFADRQEPVRI 88
>sp|B7VIP5|GLO2_VIBSL Hydroxyacylglutathione hydrolase OS=Vibrio splendidus (strain
LGP32) GN=gloB PE=3 SV=1
Length = 252
Score = 32.3 bits (72), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 50 SGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 98
S RR ++D G + + + A+ T+DA++ITH H D IGG+ +L
Sbjct: 21 SDRRCAVVDPGDA---APVLEYLAHHELTLDAILITHHHHDHIGGVPEL 66
>sp|Q9HN60|RNZ_HALSA Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 700922 / JCM
11081 / NRC-1) GN=rnz PE=3 SV=1
Length = 308
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGG 94
R +S+ +R G + L DAG+ +R+ +G+ V ITH H D + G
Sbjct: 17 TERNPSSVFVRRNGDA----FLFDAGEATQRQMMRYKTGFGVSD---VFITHGHGDHVFG 69
Query: 95 LD------DLRDWTNNVQRHIP 110
L D D T+ + H+P
Sbjct: 70 LPGLVHTWDFNDRTDPLTIHVP 91
>sp|B0R7E2|RNZ_HALS3 Ribonuclease Z OS=Halobacterium salinarum (strain ATCC 29341 / DSM
671 / R1) GN=rnz PE=3 SV=1
Length = 308
Score = 32.3 bits (72), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 36/82 (43%), Gaps = 13/82 (15%)
Query: 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGG 94
R +S+ +R G + L DAG+ +R+ +G+ V ITH H D + G
Sbjct: 17 TERNPSSVFVRRNGDA----FLFDAGEATQRQMMRYKTGFGVSD---VFITHGHGDHVFG 69
Query: 95 LD------DLRDWTNNVQRHIP 110
L D D T+ + H+P
Sbjct: 70 LPGLVHTWDFNDRTDPLTIHVP 91
>sp|Q1LZ83|LACB2_BOVIN Beta-lactamase-like protein 2 OS=Bos taurus GN=LACTB2 PE=2 SV=1
Length = 288
Score = 32.3 bits (72), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Query: 50 SGRRNILIDAGKFF---YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNN 104
+G R ILID G+ Y S L+ I +I+TH H D GG+ D+ NN
Sbjct: 38 TGPRRILIDTGEPSIPEYISCLKQALTEFNTAIQEIIVTHWHRDHTGGIGDICKSINN 95
>sp|O59330|Y1671_PYRHO UPF0173 metal-dependent hydrolase PH1671 OS=Pyrococcus horikoshii
(strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139
/ OT-3) GN=PH1671 PE=3 SV=2
Length = 225
Score = 32.3 bits (72), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 70/170 (41%), Gaps = 31/170 (18%)
Query: 77 RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIP 136
+ +D +++TH+H D +G ++ + VAM D Y V+T G+
Sbjct: 40 KDVDLILVTHAHGDHLGDAGEIARISGAK------IVAMYDLANYISEKYKDVETIGMNY 93
Query: 137 GAAVSELQFNIIDEEPFTVQDLKITPLPVWHGA--GYRSLGFRFGNICYISDVSEI-PEE 193
G P + + I +P WH + G S+G G I + DV+ +
Sbjct: 94 G--------------PTEIDGVFIVQVPAWHSSSDGKYSIGNPSGYIVKLDDVTIYHAGD 139
Query: 194 TYPFLQDCEIL------IMDALRPDRSSSTHFGLPRALEEVRKIQPKRTL 237
TY F +D E+ I AL P T G+ A + V ++P++ +
Sbjct: 140 TYVF-KDMELFAELYGPIDVALLPIGGHFT-MGVREAAKAVELLKPRKVV 187
>sp|A7MY07|GLO2_VIBHB Hydroxyacylglutathione hydrolase OS=Vibrio harveyi (strain ATCC
BAA-1116 / BB120) GN=gloB PE=3 SV=1
Length = 252
Score = 32.0 bits (71), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 3/49 (6%)
Query: 50 SGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDL 98
S +R ++D G L + A + T++A++ITH H D IGG+ DL
Sbjct: 21 SDKRCAVVDPGD--AKPVLEYLQANEL-TLEAILITHHHNDHIGGVSDL 66
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.140 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,568,483
Number of Sequences: 539616
Number of extensions: 4670985
Number of successful extensions: 11598
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 48
Number of HSP's that attempted gapping in prelim test: 11557
Number of HSP's gapped (non-prelim): 72
length of query: 278
length of database: 191,569,459
effective HSP length: 116
effective length of query: 162
effective length of database: 128,974,003
effective search space: 20893788486
effective search space used: 20893788486
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 60 (27.7 bits)