Query 023686
Match_columns 278
No_of_seqs 130 out of 1903
Neff 9.5
Searched_HMMs 29240
Date Mon Mar 25 11:04:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/023686.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/023686hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3md7_A Beta-lactamase-like; ss 100.0 7E-41 2.4E-45 287.9 23.9 253 1-278 34-293 (293)
2 3jxp_A Coenzyme PQQ synthesis 100.0 3.7E-42 1.3E-46 298.5 14.5 253 1-276 8-305 (321)
3 3g1p_A Protein PHNP; C-P lyase 100.0 7.1E-40 2.4E-44 276.7 15.0 235 1-277 8-252 (258)
4 2cbn_A Ribonuclease Z; phospho 100.0 5.8E-31 2E-35 227.3 23.0 229 35-276 16-306 (306)
5 1zkp_A Hypothetical protein BA 100.0 8.2E-30 2.8E-34 216.1 23.8 215 35-275 39-267 (268)
6 1y44_A Ribonuclease Z; zinc-de 100.0 4.7E-30 1.6E-34 223.0 21.6 229 35-277 15-305 (320)
7 3zwf_A Zinc phosphodiesterase 100.0 1.4E-29 4.9E-34 223.6 19.1 230 33-277 13-358 (368)
8 2e7y_A TRNAse Z; tRNA maturati 100.0 3.5E-27 1.2E-31 200.8 18.8 219 38-276 11-280 (280)
9 3rpc_A Possible metal-dependen 99.9 2.1E-24 7.3E-29 182.4 14.8 213 37-276 10-264 (264)
10 3kl7_A Putative metal-dependen 99.9 2.3E-23 7.9E-28 173.0 16.7 182 37-266 35-230 (235)
11 2wyl_A L-ascorbate-6-phosphate 99.9 8.1E-23 2.8E-27 180.2 19.5 220 37-277 43-324 (360)
12 3bv6_A Metal-dependent hydrola 99.9 1.1E-22 3.7E-27 180.5 18.0 222 37-277 67-349 (379)
13 2az4_A Hypothetical protein EF 99.9 1.2E-21 4.1E-26 176.7 20.3 215 36-267 17-281 (429)
14 3iek_A Ribonuclease TTHA0252; 99.9 3.9E-21 1.3E-25 173.1 18.4 213 32-258 7-239 (431)
15 3zq4_A Ribonuclease J 1, RNAse 99.8 2.5E-20 8.7E-25 172.3 17.8 212 32-267 15-254 (555)
16 3bk2_A RNAse J, metal dependen 99.8 9.1E-21 3.1E-25 175.9 14.0 217 32-267 23-270 (562)
17 3af5_A Putative uncharacterize 99.8 8.7E-20 3E-24 172.0 17.1 229 35-274 198-463 (651)
18 1vjn_A Zn-dependent hydrolase 99.8 8.4E-20 2.9E-24 149.9 14.8 152 36-245 17-178 (220)
19 2p4z_A Metal-dependent hydrola 99.8 1.8E-20 6.3E-25 159.8 10.7 217 36-276 30-284 (284)
20 2ycb_A Beta-CAsp RNAse, cleava 99.8 1.7E-19 6E-24 169.6 17.0 227 35-274 189-449 (636)
21 2i7x_A Protein CFT2; polyadeny 99.8 2.1E-19 7.2E-24 170.3 17.2 173 35-214 11-220 (717)
22 2i7t_A Cleavage and polyadenyl 99.8 8.2E-19 2.8E-23 159.4 20.0 211 35-258 21-257 (459)
23 4b87_A DNA cross-LINK repair 1 99.8 1.1E-18 3.6E-23 153.6 19.6 213 5-270 3-230 (367)
24 2xr1_A Cleavage and polyadenyl 99.8 3.1E-19 1.1E-23 167.8 14.5 178 35-223 193-395 (640)
25 3adr_A Putative uncharacterize 99.8 5.1E-18 1.7E-22 142.7 14.4 183 35-245 16-212 (261)
26 3m8t_A 'BLR6230 protein; subcl 99.8 9.9E-18 3.4E-22 143.3 15.7 184 36-245 52-247 (294)
27 2bib_A CBPE, teichoic acid pho 99.8 1.6E-17 5.6E-22 154.0 18.3 213 38-268 17-280 (547)
28 3l6n_A Metallo-beta-lactamase; 99.7 6.3E-17 2.2E-21 132.4 16.9 169 36-245 28-205 (219)
29 1a7t_A Metallo-beta-lactamase; 99.7 4.4E-17 1.5E-21 134.7 15.8 168 38-245 36-211 (232)
30 1k07_A FEZ-1 beta-lactamase; m 99.7 3.8E-17 1.3E-21 137.6 15.1 183 37-243 23-218 (263)
31 3hnn_A Putative diflavin flavo 99.7 1.3E-17 4.5E-22 140.5 10.4 191 38-259 42-251 (262)
32 2ohh_A Type A flavoprotein FPR 99.7 6.2E-17 2.1E-21 144.5 15.1 129 38-188 34-172 (404)
33 4ax1_B Metallo-beta-lactamase 99.7 1.4E-16 4.8E-21 136.6 16.8 188 37-245 56-255 (303)
34 4ad9_A Lactb2, beta-lactamase- 99.7 9E-17 3.1E-21 137.2 15.2 178 28-246 21-206 (289)
35 1ycg_A Nitric oxide reductase; 99.7 9.4E-17 3.2E-21 143.1 15.6 127 38-188 35-168 (398)
36 3zdk_A 5' exonuclease apollo; 99.7 7E-17 2.4E-21 140.3 14.1 170 77-267 23-204 (336)
37 1e5d_A Rubredoxin\:oxygen oxid 99.7 5E-17 1.7E-21 145.0 13.5 127 38-188 34-167 (402)
38 4dik_A Flavoprotein; TM0755, e 99.7 2.5E-17 8.7E-22 146.7 11.1 125 40-188 53-182 (410)
39 1m2x_A Class B carbapenemase B 99.7 1.4E-16 4.9E-21 130.8 14.5 167 37-244 25-200 (223)
40 4efz_A Metallo-beta-lactamase 99.7 6.5E-17 2.2E-21 138.8 12.3 143 36-190 14-178 (298)
41 3q6v_A Beta-lactamase; metallo 99.7 1.5E-16 5.1E-21 131.3 13.5 192 37-259 24-229 (233)
42 4hl2_A Beta-lactamase NDM-1; s 99.7 1.8E-16 6.2E-21 131.9 14.0 189 36-259 45-240 (243)
43 2r2d_A AGR_PTI_140P, Zn-depend 99.7 3.5E-17 1.2E-21 138.7 8.6 156 21-191 25-218 (276)
44 1sml_A Protein (penicillinase) 99.7 4.2E-16 1.4E-20 131.7 14.0 183 37-244 36-229 (269)
45 1mqo_A Beta-lactamase II; alph 99.7 3.5E-16 1.2E-20 128.8 12.8 168 38-246 40-216 (227)
46 2zo4_A Metallo-beta-lactamase 99.7 8.5E-16 2.9E-20 132.7 15.3 188 36-246 19-239 (317)
47 3iog_A Beta-lactamase; hydrola 99.7 4.3E-16 1.5E-20 128.0 12.6 191 37-260 21-223 (227)
48 2xf4_A Hydroxyacylglutathione 99.7 3.5E-16 1.2E-20 127.2 11.4 141 37-189 11-154 (210)
49 4eyb_A Beta-lactamase NDM-1; m 99.7 1.3E-15 4.5E-20 128.8 14.3 188 38-260 74-268 (270)
50 3dha_A N-acyl homoserine lacto 99.7 2.1E-16 7.2E-21 132.3 9.3 147 23-191 23-200 (254)
51 3aj3_A MLR6805 protein, 4-pyri 99.7 1.3E-16 4.3E-21 135.2 8.0 155 21-191 17-212 (274)
52 1jjt_A IMP-1 metallo beta-lact 99.7 3.6E-15 1.2E-19 122.9 16.4 165 37-246 31-203 (228)
53 2q9u_A A-type flavoprotein; fl 99.7 1.1E-15 3.7E-20 137.0 14.1 127 38-188 40-173 (414)
54 2gcu_A Putative hydroxyacylglu 99.7 5.5E-16 1.9E-20 129.2 11.2 124 36-190 12-146 (245)
55 2vw8_A PA1000, PQSE; quinolone 99.7 4.9E-16 1.7E-20 133.5 11.1 188 37-245 22-228 (303)
56 2y8b_A Metallo-B-lactamase; hy 99.6 3.5E-15 1.2E-19 125.8 15.7 186 36-260 65-257 (265)
57 2fhx_A SPM-1; metallo-beta-lac 99.6 4.9E-15 1.7E-19 123.3 15.1 180 37-245 28-226 (246)
58 2zwr_A Metallo-beta-lactamase 99.6 1.9E-15 6.6E-20 122.6 10.3 134 37-189 11-147 (207)
59 1xm8_A Glyoxalase II; structur 99.6 2.3E-15 7.9E-20 126.1 11.1 122 37-189 10-134 (254)
60 2qed_A Hydroxyacylglutathione 99.6 3.6E-15 1.2E-19 125.2 11.3 120 37-189 17-137 (258)
61 1qh5_A Glyoxalase II, protein 99.6 4.3E-15 1.5E-19 124.8 10.7 120 37-189 10-137 (260)
62 1ztc_A Hypothetical protein TM 99.6 1.9E-15 6.5E-20 124.0 6.5 151 23-191 18-179 (221)
63 2p18_A Glyoxalase II; metallop 99.6 1.6E-14 5.6E-19 124.4 11.3 128 37-189 38-183 (311)
64 3esh_A Protein similar to meta 99.6 2E-15 7E-20 128.2 5.6 145 35-190 44-210 (280)
65 3tp9_A Beta-lactamase and rhod 99.6 6.4E-15 2.2E-19 134.3 8.5 128 37-189 14-152 (474)
66 3r2u_A Metallo-beta-lactamase 99.5 1.8E-14 6E-19 130.9 8.2 129 36-189 34-172 (466)
67 2cfu_A SDSA1; SDS-hydrolase, l 99.5 2.3E-13 7.8E-18 128.3 13.3 191 38-246 122-350 (658)
68 2p97_A Hypothetical protein; p 99.5 2.5E-13 8.4E-18 109.7 10.3 164 36-245 21-186 (201)
69 1p9e_A Methyl parathion hydrol 99.4 2.9E-13 9.8E-18 117.7 7.4 144 36-190 94-259 (331)
70 3h3e_A Uncharacterized protein 99.4 2.2E-12 7.6E-17 108.1 11.2 65 36-118 29-93 (267)
71 2yhe_A SEC-alkyl sulfatase; hy 99.0 1.7E-13 5.9E-18 128.7 0.0 189 39-246 133-361 (668)
72 3bk2_A RNAse J, metal dependen 91.4 0.35 1.2E-05 44.5 6.6 59 214-277 379-440 (562)
73 3zq4_A Ribonuclease J 1, RNAse 89.5 0.36 1.2E-05 44.3 4.9 59 214-277 364-425 (555)
74 2xr1_A Cleavage and polyadenyl 87.5 0.89 3E-05 42.5 6.2 57 215-276 580-639 (640)
75 2ycb_A Beta-CAsp RNAse, cleava 87.0 0.83 2.8E-05 42.7 5.7 57 215-276 576-635 (636)
76 3af5_A Putative uncharacterize 86.8 0.93 3.2E-05 42.4 5.9 57 215-276 591-650 (651)
77 2az4_A Hypothetical protein EF 85.5 0.72 2.5E-05 40.6 4.3 52 214-276 378-429 (429)
78 2i7t_A Cleavage and polyadenyl 84.4 1.7 5.9E-05 38.6 6.3 62 215-277 393-457 (459)
79 3iek_A Ribonuclease TTHA0252; 71.3 5.7 0.0002 35.0 5.5 55 215-276 377-431 (431)
80 4b87_A DNA cross-LINK repair 1 54.8 17 0.00058 31.2 5.2 28 214-241 317-344 (367)
81 1qys_A TOP7; alpha-beta, novel 53.2 42 0.0014 21.5 6.6 56 222-277 34-91 (106)
82 3zdk_A 5' exonuclease apollo; 42.9 16 0.00055 30.9 3.2 33 214-246 273-306 (336)
83 3h3e_A Uncharacterized protein 42.0 80 0.0027 25.6 7.1 50 221-277 217-266 (267)
84 4gud_A Imidazole glycerol phos 40.6 13 0.00043 28.9 2.0 26 51-76 2-27 (211)
85 4ayb_P DNA-directed RNA polyme 26.5 25 0.00086 20.3 1.1 14 16-29 20-33 (48)
86 2ppv_A Uncharacterized protein 25.4 49 0.0017 28.0 3.2 63 178-240 155-217 (332)
87 2i7x_A Protein CFT2; polyadeny 23.9 90 0.0031 29.4 5.0 56 217-277 662-717 (717)
88 3j21_V 50S ribosomal protein L 23.2 98 0.0034 19.3 3.5 22 18-45 3-24 (66)
89 2kak_A EC protein I/II; metall 23.0 50 0.0017 19.4 1.9 22 11-32 32-53 (53)
90 1vq8_U 50S ribosomal protein L 20.7 1.1E+02 0.0037 19.1 3.3 21 19-45 3-23 (66)
No 1
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=100.00 E-value=7e-41 Score=287.93 Aligned_cols=253 Identities=32% Similarity=0.564 Sum_probs=202.0
Q ss_pred CCCCCCCCcccccccCCCCCCCccccccccCCCCCcccceeEEEEccCCCCC--ceEEEecCcchHHHHhhhCCcCCCCC
Q 023686 1 MGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGR--RNILIDAGKFFYHSALRWFPAYGIRT 78 (278)
Q Consensus 1 ~~~~~~~g~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~s~li~~~~~~~~--~~iLiD~G~~~~~~~~~~l~~~~~~~ 78 (278)
||||+++|+|+|+| .|.+|.++. +.+.|+++|++|+..+ .++ +.+|||||++...++.+ .++.+
T Consensus 34 LG~g~~~G~P~~~c------~c~~C~~~~---~~~~R~~~s~li~~~~-~~g~~~~iLID~G~~~~~~l~~----~~~~~ 99 (293)
T 3md7_A 34 LGCGSSPGVPRING------DWGKCDPKN---PKNRRRRASLLVERYD-AEGNNTVVVIDTGPDFRMQMID----SGVHM 99 (293)
T ss_dssp EECBCTTCBSCTTC------CCTTSCTTC---GGGCBCBCEEEEEEEC-TTCCEEEEEECCCTTHHHHHHH----HTCCC
T ss_pred EeecCCCCcccCCC------CCccCCccC---CCCcccccEEEEEecC-CCCceeEEEEECCccHHHHHHh----cCCCc
Confidence 79999999999999 999999986 4678999999999411 123 79999999997666654 35679
Q ss_pred cCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecc
Q 023686 79 IDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQD 157 (278)
Q Consensus 79 Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~ 157 (278)
||+|||||.|.||++|++.+...+.....+++||+++.+.+.+++.+.+.+.... ........++..+ +++.+++++
T Consensus 100 id~IliTH~H~DHi~Gl~~l~~~~~~~~~~~~vy~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~~~~~g~ 177 (293)
T 3md7_A 100 LDAAVYTHPHADHIHGIDDLRTYVVDNGRLMDVYANRLTRNRLYDTFGYCFETPV--GSSYPPILSMHDIAPETPFSIEG 177 (293)
T ss_dssp CSEEECSCCCHHHHTTGGGGHHHHHHHTSCEEEEECHHHHHHHHHHCGGGTSCCT--TCCCCCCEEEEECCTTCCEEECC
T ss_pred ccEEEEcCCCchhhCCHHHHHHHhhcCCCceEEEECHHHHHHHHHhhhhhhcccc--ccCCCCceEEEEcCCCCcEEECC
Confidence 9999999999999999999887543233578999999999888775544332110 0001122355566 578999999
Q ss_pred ----eEEEEEEecCCCCceeeEEEEccEEEecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCC
Q 023686 158 ----LKITPLPVWHGAGYRSLGFRFGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQP 233 (278)
Q Consensus 158 ----~~i~~~~~~H~~~~~~~g~~i~~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~ 233 (278)
++|+++++.|.+ .+++||++++++|+||+.+.++.+.+.++++|++++|+++.. ..+.|+++.+++++++++++
T Consensus 178 ~~~~~~v~~~~~~H~~-~~~~g~~i~~~~y~gDt~~~~~~~~~~~~~~Dlli~e~~~~~-~~~~H~~~~~a~~~~~~~~~ 255 (293)
T 3md7_A 178 AGGAIRFEPFSQVHGD-IESLGFRIGSVVYCTDVSAFPEQSLQYIKDADVLIIGALQYR-PHPSHFSLGEALEWIEKLSP 255 (293)
T ss_dssp TTCCEEEEEEEEEETT-EEEEEEEETTEEEECSCSBCCGGGHHHHTTCSEEEEECCCSS-CBTTBCCHHHHHHHHHHHCC
T ss_pred CCCcEEEEEEEecCCC-CCEEEEEEeEEEEECCCCCCCHHHHHHhcCCCEEEEeCccCC-CCCCCCCHHHHHHHHHHcCC
Confidence 999999999985 489999999999999999888888999999999999997654 56789999999999999999
Q ss_pred CeEEEEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEEeecC
Q 023686 234 KRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVML 278 (278)
Q Consensus 234 ~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i~~~~ 278 (278)
++++++|+++.+... ++ .++....+.+++|||+|+++.
T Consensus 256 k~lvl~H~~~~~~~~----~~---~~~~~~~v~~a~DG~~i~l~~ 293 (293)
T 3md7_A 256 KRAILTHMHVPLDYE----TV---MRETPHHVEPGYDGLRFEVAV 293 (293)
T ss_dssp SEEEEESBCTTCCHH----HH---HHHSCTTEEECCTTCEEEECC
T ss_pred CEEEEECCCCCCCHH----HH---HhhcCCCcEEeeCCcEEEecC
Confidence 999999999887642 12 223344899999999999863
No 2
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=100.00 E-value=3.7e-42 Score=298.50 Aligned_cols=253 Identities=20% Similarity=0.318 Sum_probs=196.0
Q ss_pred CCCCCCCCcccccccCCCCCCCccccccccCCCC-CcccceeEEEEccCCCCCc-eEEEecCcchHHHHhhhCC-----c
Q 023686 1 MGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNK-NRRLNTSILIRYPGPSGRR-NILIDAGKFFYHSALRWFP-----A 73 (278)
Q Consensus 1 ~~~~~~~g~~~~~~~~~~~~~~~~c~~~~~~~~~-~~~~~~s~li~~~~~~~~~-~iLiD~G~~~~~~~~~~l~-----~ 73 (278)
||||+++|+|+|+| .|.+|.+|++.++. +.|+++|++|+. +++ .||||||++...++.+.-. .
T Consensus 8 LGtg~s~G~P~~~C------~C~~C~~a~~~~~~~~~R~~ss~li~~----~~~~~iLiD~G~~~~~~l~~~~~l~~~~~ 77 (321)
T 3jxp_A 8 LGSAAGGGFPQWNC------NCVNCKGYRDGTLKATARTQSSIALSD----DGVHWILCNASPDIRAQLQAFAPMQPARA 77 (321)
T ss_dssp EECBCTTTBTTTTC------CSHHHHHHHHTCSCCCCBCBCEEEEES----SSSSEEEECCCTTHHHHHHTCGGGCCCSS
T ss_pred EEeCCCCCCCcCCc------CCccchhhhhCCCCCCcccceEEEEEe----CCceEEEEeCCchHHHHHHhccccccccc
Confidence 79999999999999 99999999976665 889999999994 445 4999999997766655310 1
Q ss_pred CCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCc
Q 023686 74 YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEP 152 (278)
Q Consensus 74 ~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 152 (278)
.++.+||+|||||.|.||++|++.+.+. .+++||+++.+.+.++..+. .+... .+ ....+++..+ ++++
T Consensus 78 ~~~~~i~~i~lTH~H~DH~~gl~~l~~~-----~~~~vy~~~~~~~~l~~~~~-~f~~~--~~--~~~~i~~~~i~~g~~ 147 (321)
T 3jxp_A 78 LRDTGINAIVLLDSQIDHTTGLLSLREG-----CPHQVWCTDMVHQDLTTGFP-LFNML--SH--WNGGLQWNRIELEGS 147 (321)
T ss_dssp SSCCSEEEEECSCCCHHHHGGGGGGGGG-----CCEEEEECHHHHHHTTTTSC-HHHHH--TT--TTTCEEEEECCSSSC
T ss_pred CCcccCCEEEECCCChhhhhhHHHHHhc-----CCCeEEECHHHHHHHHhhCc-ccccc--cc--ccCceeEEEcCCCCe
Confidence 3567999999999999999999999652 46899999999888775432 11100 00 1112455556 5789
Q ss_pred eee---cceEEEEEEec--------CCCC---ceeeEEEEc------cEEEecCCCCCCcchhhcccCCCEEEEcCcCCC
Q 023686 153 FTV---QDLKITPLPVW--------HGAG---YRSLGFRFG------NICYISDVSEIPEETYPFLQDCEILIMDALRPD 212 (278)
Q Consensus 153 ~~~---g~~~i~~~~~~--------H~~~---~~~~g~~i~------~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~ 212 (278)
+++ ++++|+++++. |..+ .+++||+++ +++|+||+.+.++.+.+.++++|++++|+++..
T Consensus 148 ~~i~~~~~~~V~~~~v~H~~~~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~Dt~~~~~~~~~~~~~~D~li~eat~~~ 227 (321)
T 3jxp_A 148 FVIDACPNLKFTPFPLRSAAPPYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWE 227 (321)
T ss_dssp EECTTSTTEEEEEEEECCCCCTTCTTTTSCCTTSEEEEEEEETTTCCEEEEESSCCCCCHHHHHHHHHCSEEEEECCCSS
T ss_pred EEeccCCCeEEEEEEecCCccccccccccccCCCcEEEEEEecCCCcEEEEECCCCCCCHHHHHHhcCCCEEEEeCCCCC
Confidence 999 99999999998 5431 379999997 799999999888888999999999999997654
Q ss_pred C-------------CCCCCCCHH---HHHHHHHHhCCCeEEEEeeccCCCh-hhHHHHHHHhhhhCCCceEEeecCeEEe
Q 023686 213 R-------------SSSTHFGLP---RALEEVRKIQPKRTLFIGMMHLMDH-EKVNEELLKLMETEGLDVQLSYDGLRVP 275 (278)
Q Consensus 213 ~-------------~~~~H~~~~---~~~~~~~~l~~~~~v~~h~~~~~~~-~~~~~~~~~~~~~~g~~v~~~~dg~~i~ 275 (278)
. ..++|++.. +++++++++++++++++|+++.++. ....++.++.. ..++.+++|||+|+
T Consensus 228 d~e~~~~glk~r~~~~~gH~s~~~~~eA~~~a~~~~~k~lvLtH~s~~np~l~~~~~e~~~~~---~~~v~~A~DGm~i~ 304 (321)
T 3jxp_A 228 DDEMQRRGVGTRTGREMGHLAQNGPGGTLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVL---RRGVEVAFDGMSIE 304 (321)
T ss_dssp TTHHHHHTSCSCCCC-CCCCCSSSTTCHHHHHTTCSSSEEEEESBCTTCGGGSTTCHHHHHHH---HTTEEECCTTCEEE
T ss_pred cHHHhhccccccccCCCcccCCCCHHHHHHHHHhCCCCeEEEEEeCCCCcccccchHHHHHhh---cCCcEEecCCcEEE
Confidence 1 456899999 9999999999999999999987642 11112222322 23799999999998
Q ss_pred e
Q 023686 276 V 276 (278)
Q Consensus 276 ~ 276 (278)
+
T Consensus 305 ~ 305 (321)
T 3jxp_A 305 L 305 (321)
T ss_dssp E
T ss_pred e
Confidence 6
No 3
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=100.00 E-value=7.1e-40 Score=276.72 Aligned_cols=235 Identities=26% Similarity=0.480 Sum_probs=182.6
Q ss_pred CCCCCCCCcccccccCCCCCCCccccccccCCCCCcccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcC
Q 023686 1 MGTGTSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTID 80 (278)
Q Consensus 1 ~~~~~~~g~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id 80 (278)
||||+++|+|+++| .|..|.+|++ .+.+.|+++|++|+ .+++.+|||||.+. +.+. ....+||
T Consensus 8 LGtg~~~g~P~~~c------~C~~C~~ar~-~~~~~r~~s~~li~----~~~~~iLiD~G~~~---~~~~---~~~~~id 70 (258)
T 3g1p_A 8 TGTGGAQGVPAWGC------ECAACARARR-SPQYRRQPCSGVVK----FNDAITLIDAGLHD---LADR---WSPGSFQ 70 (258)
T ss_dssp EECBCSSCBSCTTC------CSHHHHHHHH-CGGGCBCBSEEEEE----ETTEEEEECCCCTT---HHHH---CCTTSSC
T ss_pred EEeCCCCCCccCCc------CChhhhhhhh-CccccccCceEEEE----ECCcEEEEECCchH---HHhh---cCcccCC
Confidence 79999999999999 9999999986 35788999999999 46899999999543 2222 3446899
Q ss_pred EEEeecCChhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceee-eec-cCCceeecce
Q 023686 81 AVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQF-NII-DEEPFTVQDL 158 (278)
Q Consensus 81 ~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~g~~ 158 (278)
+||+||.|.||++|+..+.... ..+++||+++.... +.+ ++.. + .. ..+ ..+ +++.++++++
T Consensus 71 ~IliTH~H~DHi~gl~~l~~~~---~~~~~v~~~~~~~~-~~~----~~~~----~--~~--~~~~~~~~~g~~~~~g~~ 134 (258)
T 3g1p_A 71 QFLLTHYHMDHVQGLFPLRWGV---GDPIPVYGPPDEQG-CDD----LFKH----P--GL--LDFSHTVEPFVVFDLQGL 134 (258)
T ss_dssp EEECSCCCHHHHGGGTTTTTCS---SSCEEEEECCCSSC-STT----TTTS----C--TT--EEEEEECCTTCCEEETTE
T ss_pred EEEEccCchhHhCCHHHHhccC---CCCeEEEeChhhhh-HHH----HhcC----C--Cc--cccccccCCCCeEEECCE
Confidence 9999999999999998875422 23588999987651 111 1100 0 11 111 233 6789999999
Q ss_pred EEEEEEecCCCCceeeEEEEc----cEEEecCCCCCCcchhhcc--cCCCEEEEcCcCCCC--CCCCCCCHHHHHHHHHH
Q 023686 159 KITPLPVWHGAGYRSLGFRFG----NICYISDVSEIPEETYPFL--QDCEILIMDALRPDR--SSSTHFGLPRALEEVRK 230 (278)
Q Consensus 159 ~i~~~~~~H~~~~~~~g~~i~----~v~~~gD~~~~~~~~~~~~--~~~dili~e~~~~~~--~~~~H~~~~~~~~~~~~ 230 (278)
+|++++++|++ ++++|+++ +++|+||+.+.++...+.+ +++|++++|+++... ...+|++++++.+++++
T Consensus 135 ~v~~~~~~H~~--~~~g~~i~~~~~~i~~~GDt~~~~~~~~~~l~~~~~Dlli~e~t~~~~~~~~~~H~~~~~a~~~~~~ 212 (258)
T 3g1p_A 135 QVTPLPLNHSK--LTFGYLLETAHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRADAPRNHCDLNTVLALNQV 212 (258)
T ss_dssp EEEEEECCSSS--CCEEEEEECSSCEEEEECSCSSCCHHHHHHHHHTCCSEEEEECCBSSCSSCCSSSCBHHHHHHHHHH
T ss_pred EEEEEECCCCC--CceEEEEEeCCcEEEEECCCCCCCHHHHHHHHhCCCCEEEEeCCCCCccccCCCCCCHHHHHHHHHH
Confidence 99999999987 78999997 7999999998887667777 689999999998654 35789999999999999
Q ss_pred hCCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEEeec
Q 023686 231 IQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVM 277 (278)
Q Consensus 231 l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i~~~ 277 (278)
+++++++++|+++.++. + ++.+...-++.+++|||+|++.
T Consensus 213 ~~~k~lil~H~s~~~~~----~---~~~~~~~~~v~~a~Dg~~~~~~ 252 (258)
T 3g1p_A 213 IRSPRVILTHISHQFDA----W---LMENALPSGFEVGFDGMEIGVA 252 (258)
T ss_dssp HCCSCEEEESCCHHHHH----H---HTTCCCCTTEEECCTTEEEC--
T ss_pred cCCCEEEEECccCccch----h---hhhhhCCCCeEEccCCCEEeee
Confidence 99999999998865432 1 2223444589999999999874
No 4
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.98 E-value=5.8e-31 Score=227.29 Aligned_cols=229 Identities=18% Similarity=0.173 Sum_probs=170.8
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhh--ccCCCCccEE
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWT--NNVQRHIPIY 112 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~--~~~~~~~~v~ 112 (278)
..|+++|++|+...+.++..+|||||.+...++.+. ...+.+||+|||||.|.||++|++.+.... ....++++||
T Consensus 16 ~~r~~~~~li~~~~~~~~~~iliD~G~~~~~~l~~~--~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~i~ 93 (306)
T 2cbn_A 16 RTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHT--AFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQPLTIY 93 (306)
T ss_dssp SSCCBCEEEEECCCSSCCCEEEECCCTTHHHHHHTS--CCCTTTEEEEECSCCCHHHHTTHHHHHHHHHHTTCCSCEEEE
T ss_pred CCCCCCEEEEEeecCCCCcEEEEECCHHHHHHHHHh--CCCHHHcCEEEEecCCchhhCChHHHHHHHHhcCCCCCeEEE
Confidence 358899999993100157899999999865555442 345678999999999999999999998742 2233568999
Q ss_pred eccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEecCCCCceeeEEEEc------------
Q 023686 113 VAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGFRFG------------ 179 (278)
Q Consensus 113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~------------ 179 (278)
+++.+.+.++......... .....++..+ +++.+++++++|+++++.|+. +++||++.
T Consensus 94 ~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~v~~~~~~H~~--~~~gy~i~~~~~~~~~~~~~ 164 (306)
T 2cbn_A 94 GPQGIREFVETALRISGSW-------TDYPLEIVEIGAGEILDDGLRKVTAYPLEHPL--ECYGYRIEEHDAPGALNAQA 164 (306)
T ss_dssp ESTTHHHHHHHHHHHTTCC-------CSSCEEEEECCSEEEEECSSEEEEEEECBSSS--CCEEEEEEECCCCCCBCHHH
T ss_pred cCccHHHHHHHHHHhhccC-------CCceEEEEEcCCCcEeecCCEEEEEEEccCCC--CccEEEEEecCccCccCHHH
Confidence 9999888776543211000 0112344455 457888999999999999987 78888763
Q ss_pred ------------------------------------------cEEEecCCCCCCcchhhcccCCCEEEEcCcCCCC----
Q 023686 180 ------------------------------------------NICYISDVSEIPEETYPFLQDCEILIMDALRPDR---- 213 (278)
Q Consensus 180 ------------------------------------------~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~---- 213 (278)
+++|+||+.+.+ .+.+.++++|++++|+++.+.
T Consensus 165 ~~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~-~~~~~~~~~D~li~E~t~~~~~~~~ 243 (306)
T 2cbn_A 165 LKAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCD-AALDLAKGVDVMVHEATLDITMEAK 243 (306)
T ss_dssp HHHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEECCSCBSCS-THHHHHTTCSEEEEECCBCGGGHHH
T ss_pred HHHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHH-HHHHHhcCCCEEEEECcCChhhHhH
Confidence 599999999865 477788899999999998764
Q ss_pred -CCCCCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEEee
Q 023686 214 -SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 276 (278)
Q Consensus 214 -~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i~~ 276 (278)
...+|+++.++.++++++++++++++|+++.+......+..++..+.+. ++.+++|||++++
T Consensus 244 a~~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~~~~~~~~~~~e~~~~~~-~~~~a~Dg~~~~~ 306 (306)
T 2cbn_A 244 ANSRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFP-ATELANDFTVFNV 306 (306)
T ss_dssp HHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTTCS-CEEECCTTCEEEC
T ss_pred HhhcCCCCHHHHHHHHHHcCCcEEEEEeecCCCCCCchhHHHHHHHHhCC-CcEEcccccEeeC
Confidence 3578999999999999999999999999998764322223333333344 7999999999975
No 5
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.97 E-value=8.2e-30 Score=216.09 Aligned_cols=215 Identities=18% Similarity=0.222 Sum_probs=167.0
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhh--hc----cCCCC
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDW--TN----NVQRH 108 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~--~~----~~~~~ 108 (278)
..|+++|++|+ .++..+|||||.+...++.+. .++.+||+|||||.|.||++|++.+.+. +. ...++
T Consensus 39 ~~~~~~~~li~----~~~~~iLiD~G~~~~~~l~~~---~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~ 111 (268)
T 1zkp_A 39 AGEATSGYLFE----HDGFRLLVDCGSGVLAQLQKY---ITPSDIDAVVLSHYHHDHVADIGVLQYARLITSATKGQLPE 111 (268)
T ss_dssp TTCCBSEEEEE----ETTEEEEECCCTTHHHHHTTT---CCGGGCCEEECSCCCHHHHTTHHHHHHHHHHHHHHHCCCCC
T ss_pred CCCCccEEEEE----ECCcEEEEECCHHHHHHHHHh---CCcccCCEEEEecCCchhhCCHHHHHHHHHhcccccCCCCc
Confidence 45788999999 457899999999865555443 4567899999999999999999988765 21 12346
Q ss_pred ccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEecCCCCceeeEEEEc----cEEE
Q 023686 109 IPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGFRFG----NICY 183 (278)
Q Consensus 109 ~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~----~v~~ 183 (278)
++||+++...+.++... + + . ......+ +++.+++++++|++++++|++ ++++|+++ +++|
T Consensus 112 ~~i~~~~~~~~~l~~~~--~-------~--~--~~~~~~~~~g~~~~~g~~~v~~~~~~H~~--~~~~~~i~~~~~~i~~ 176 (268)
T 1zkp_A 112 LPIYGHTFDENGFHSLT--H-------E--P--HTKGIPYNPEETLQIGPFSISFLKTVHPV--TCFAMRITAGNDIVVY 176 (268)
T ss_dssp EEEEECSSSHHHHHTTC--B-------T--T--TEEEEECCTTSCEEETTEEEEEEECCSSS--CCEEEEEEETTEEEEE
T ss_pred eEEEeCccHHHHHHhcc--c-------C--C--ccceEEecCCCeEEECCEEEEEEECCCCC--CceEEEEEECCeEEEE
Confidence 89999999988776532 0 0 0 1123344 567899999999999999987 78999985 8999
Q ss_pred ecCCCCCCcchhhcccCCCEEEEcCcCCCCC---CCCCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhh
Q 023686 184 ISDVSEIPEETYPFLQDCEILIMDALRPDRS---SSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMET 260 (278)
Q Consensus 184 ~gD~~~~~~~~~~~~~~~dili~e~~~~~~~---~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~ 260 (278)
+||+.+.+ .+.+.++++|++++|+++.... ..+|+++.++.++++++++++++++|+.+....+ +...+..+.
T Consensus 177 ~GD~~~~~-~~~~~~~~~d~li~e~~~~~~~~~~~~~H~~~~~a~~~~~~~~~~~lil~H~~~~~~~~---~~~~~~~~~ 252 (268)
T 1zkp_A 177 SADSSYIP-EFIPFTKDADLFICECNMYAHQEAAKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPA---DLVTEAKQI 252 (268)
T ss_dssp CCSCCCCT-THHHHHTTCSEEEEECCBCTTSCCGGGTCCBHHHHHHHHHHTTCSEEEEESBCSSSCTH---HHHHHHHTT
T ss_pred eCCCCCCH-HHHHHHcCCCEEEEECCCCccccccCCCCCCHHHHHHHHHHcCCCEEEEECCCCCCChH---HHHHHHHHh
Confidence 99998754 4777788999999999886432 3569999999999999999999999999876543 233344445
Q ss_pred CCCceEEeecCeEEe
Q 023686 261 EGLDVQLSYDGLRVP 275 (278)
Q Consensus 261 ~g~~v~~~~dg~~i~ 275 (278)
++.++.+++||++++
T Consensus 253 ~~~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 253 FSGHITLAHSGYVWN 267 (268)
T ss_dssp CCSEEEECCTTCEEE
T ss_pred CCCCEEEEeCCcccc
Confidence 565899999999985
No 6
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.97 E-value=4.7e-30 Score=223.01 Aligned_cols=229 Identities=18% Similarity=0.237 Sum_probs=169.3
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhh--ccCCCCccEE
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWT--NNVQRHIPIY 112 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~--~~~~~~~~v~ 112 (278)
..|+++|++|+... .++..+|||||.+...++.+. ...+.+||+|||||.|+||++|++.+.... ..+.++++||
T Consensus 15 ~~r~~~~~li~~~~-~~~~~iLiD~G~~~~~~l~~~--~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~~~~~~~~~~v~ 91 (320)
T 1y44_A 15 KARNVTSVALKLLE-ERRSVWLFDCGEATQHQMLHT--TIKPRKIEKIFITHMHGDHVYGLPGLLGSRSFQGGEDELTVY 91 (320)
T ss_dssp SSCCBCEEEEEETT-TTSEEEEECCCTTHHHHHTTS--SCCGGGEEEEECSBCCGGGTTTHHHHHHHHHHTTCCSCEEEE
T ss_pred ccCCCCEEEEEEec-CCCcEEEEECCHHHHHHHHHc--CCCHHHcCEEEEeCCChhhhCCHHHHHHHHHhcCCCCCEEEE
Confidence 35788999998310 157899999999865444332 234568999999999999999999998753 2233468999
Q ss_pred eccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEecCCCCceeeEEEEc------------
Q 023686 113 VAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGFRFG------------ 179 (278)
Q Consensus 113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~------------ 179 (278)
+++.+.+.++......... .....++..+ +++.+++++++|+++|+.|+. ++++|+++
T Consensus 92 ~~~~~~~~l~~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~v~~~p~~H~~--~~~gy~i~~~~~~~~~~~~~ 162 (320)
T 1y44_A 92 GPKGIKAFIETSLAVTKTH-------LTYPLAIQEIEEGIVFEDDQFIVTAVSVIHGV--EAFGYRVQEKDVPGSLKADV 162 (320)
T ss_dssp ESTTHHHHHHHHHHHTTCC-------CSSCEEEEECCSEEEEECSSEEEEEEECBSSS--SBEEEEEEECCBCCCC----
T ss_pred eCHHHHHHHHHHHHhhccC-------CCCceEEEEcCCCceEecCCEEEEEEEccCCC--CcceEEEecCCCcCccCHHH
Confidence 9999888776542111000 0012234455 457788899999999999987 67888763
Q ss_pred ------------------------------------------cEEEecCCCCCCcchhhcccCCCEEEEcCcCCCC----
Q 023686 180 ------------------------------------------NICYISDVSEIPEETYPFLQDCEILIMDALRPDR---- 213 (278)
Q Consensus 180 ------------------------------------------~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~---- 213 (278)
+++|+||+.+.+ .+.+.++++|++++|+++.+.
T Consensus 163 ~~~~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~-~~~~~~~~~D~li~E~t~~~~~~~~ 241 (320)
T 1y44_A 163 LKEMNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSD-KLKELARDCDVMVHEATFAKEDRKL 241 (320)
T ss_dssp ----------------------------------CCCCBCCCEEEECCSCBCCH-HHHHHTTTCSEEEEECCBCTTCHHH
T ss_pred HHHcCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHH-HHHHHhCCCCEEEEeccCCcchHhH
Confidence 699999999765 477788899999999999764
Q ss_pred -CCCCCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEEeec
Q 023686 214 -SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVM 277 (278)
Q Consensus 214 -~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i~~~ 277 (278)
...+|+++.++.++++++++++++++|+++.+......+..++..+.+. ++.+++|||++++.
T Consensus 242 a~~~~H~t~~~a~~~a~~~~~~~lil~H~s~~~~~~~~~~~~~e~~~~~~-~~~~a~dg~~~~l~ 305 (320)
T 1y44_A 242 AYDYYHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFP-NSVAAYDFLEVNVP 305 (320)
T ss_dssp HHHTTCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHCS-SEEECCTTCEEECC
T ss_pred HhhcCCCCHHHHHHHHHHcCCCEEEEEeEcCCCCCcchHHHHHHHHHhCC-CcEeccCCCEEEec
Confidence 3578999999999999999999999999997754322222333333344 79999999999874
No 7
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=99.97 E-value=1.4e-29 Score=223.59 Aligned_cols=230 Identities=19% Similarity=0.207 Sum_probs=161.7
Q ss_pred CCCcccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhc--c----CC
Q 023686 33 NKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTN--N----VQ 106 (278)
Q Consensus 33 ~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~--~----~~ 106 (278)
|...|+++|++|+. ++..+|||||.+...++.+. ...+.+||+|||||.|.||++|++.++.... . ..
T Consensus 13 p~~~r~~ss~ll~~----~~~~iLiD~G~g~~~~l~~~--~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~~~~~~~ 86 (368)
T 3zwf_A 13 PSPTRGASAVVLRC----EGECWLFDCGEGTQTQLMKS--QLKAGRITKIFITHLHGDHFFGLPGLLCTISLQSGSMVSK 86 (368)
T ss_dssp CCSSSCSSEEEEEE----TTEEEEECCCTTHHHHHHHS--SSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC------
T ss_pred CCCCCCccEEEEEE----CCeEEEEeCChhHHHHHHHc--CCChHHCCEEEECCCChHHhCcHHHHHHHhhhccccccCC
Confidence 34578999999994 67899999999876666542 3455689999999999999999999987532 1 12
Q ss_pred CCccEEeccccHHHHHhccccccccccccCCCCccceeeeec----------------------------cCC-------
Q 023686 107 RHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII----------------------------DEE------- 151 (278)
Q Consensus 107 ~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~------- 151 (278)
++++||+++...+.+.......... ....+.+.++ +++
T Consensus 87 ~~l~iygp~~~~~~l~~~l~~~~~~-------~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~ 159 (368)
T 3zwf_A 87 QPIEIYGPVGLRDFIWRTMELSHTE-------LVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSE 159 (368)
T ss_dssp CCEEEEEETTHHHHHHHHHHHTTCC-------CSSCEEEEEECCCGGGSCC-------------------CCCEECCBTT
T ss_pred CCeEEEEcHHHHHHHHHHHHhhCcC-------CCceEEEEEeecCccccccccccccccccccccCcccccccccccccc
Confidence 4689999999988877532111000 0000111111 111
Q ss_pred -----ceeecceEEEEEEecCCCCceeeEEEEc-----------------------------------------------
Q 023686 152 -----PFTVQDLKITPLPVWHGAGYRSLGFRFG----------------------------------------------- 179 (278)
Q Consensus 152 -----~~~~g~~~i~~~~~~H~~~~~~~g~~i~----------------------------------------------- 179 (278)
.++.++++|+++++.|.. +++||++.
T Consensus 160 ~~~~~~~~~~~~~V~a~~~~H~v--p~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~v~ 237 (368)
T 3zwf_A 160 ENSYLLFDDEQFVVKAFRLFHRI--PSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVL 237 (368)
T ss_dssp TTBEEEEECSSEEEEEEEEESSS--CEEEEEEEECC--------------------------------------------
T ss_pred cCceeEEeCCCEEEEEEeccCCC--ceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHHhc
Confidence 233478999999999997 89999993
Q ss_pred -------cEEEecCCCCC-CcchhhcccCCCEEEEcCcCCCCC-----CCCCCCHHHHHHHHHHhCCCeEEEEeeccCCC
Q 023686 180 -------NICYISDVSEI-PEETYPFLQDCEILIMDALRPDRS-----SSTHFGLPRALEEVRKIQPKRTLFIGMMHLMD 246 (278)
Q Consensus 180 -------~v~~~gD~~~~-~~~~~~~~~~~dili~e~~~~~~~-----~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~ 246 (278)
+++|+||+.+. .+.+.+.++++|++++|++|.+.. ..+|+++.++.++++++++++++++|+++.+.
T Consensus 238 ~~~~~g~~v~~~GDT~~~~~~~~~~~~~~~Dlli~Eat~~~~~~~~a~~~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~ 317 (368)
T 3zwf_A 238 KKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLDDAQMDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRYK 317 (368)
T ss_dssp ----CCCEEEEECSCSEECSSHHHHHTTTCSEEEEECCSCGGGHHHHHHTTCCCHHHHHHHHHHTTCSEEEEECBCCCC-
T ss_pred cccccceEEEEEecCCcccchhHHHHhcCCCEEEEecCCChHHHhhhhcCCCCCHHHHHHHHHHcCCCEEEEEeeCcccC
Confidence 58999999872 345778889999999999987642 47899999999999999999999999999986
Q ss_pred hh--------hHHHHHHHhhhh-CC-CceEEeecCeEEeec
Q 023686 247 HE--------KVNEELLKLMET-EG-LDVQLSYDGLRVPVM 277 (278)
Q Consensus 247 ~~--------~~~~~~~~~~~~-~g-~~v~~~~dg~~i~~~ 277 (278)
.. ...+++.+.+++ +. .++.+++||++|+|.
T Consensus 318 ~~~~~~~~~~~~~~~~~~ea~~~f~~~~~~~a~dg~~~~i~ 358 (368)
T 3zwf_A 318 PVALAREGETDGIAELKKQAESVLDLQEVTLAEDFMVISIP 358 (368)
T ss_dssp --------------------------CEEEECCTTCEEECC
T ss_pred ccccccccccchHHHHHHHHHHhcCCCceEEecCCcEEEee
Confidence 31 122334444433 33 279999999999985
No 8
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.95 E-value=3.5e-27 Score=200.83 Aligned_cols=219 Identities=15% Similarity=0.195 Sum_probs=154.7
Q ss_pred cceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHh----hhccCCCCccEEe
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRD----WTNNVQRHIPIYV 113 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~----~~~~~~~~~~v~~ 113 (278)
.++++++. +..+|||||.+....+. ....+|++|||||.|.||++|++.+.. .++.+.++++||+
T Consensus 11 ~~~~~~i~------~~~iLiD~G~~~~~~l~-----~~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~~~~~~v~~ 79 (280)
T 2e7y_A 11 FSTWIYYS------PERILFDAGEGVSTTLG-----SKVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDREKPLDVFY 79 (280)
T ss_dssp TEEEEEEG------GGTEEEEECTTHHHHHG-----GGGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGGCCCEEEEE
T ss_pred ceEEEEEC------CcEEEEECCcchHHHhc-----cCccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCCCCCCEEEE
Confidence 34566664 47899999998644332 235689999999999999999999963 2221234689999
Q ss_pred ccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeec-----ceEEEEEEecCCCCceeeEEEEc--------
Q 023686 114 AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQ-----DLKITPLPVWHGAGYRSLGFRFG-------- 179 (278)
Q Consensus 114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g-----~~~i~~~~~~H~~~~~~~g~~i~-------- 179 (278)
++... .+++......... +. ......+..+ +++.++++ +++|+++++.|+++..++||++.
T Consensus 80 ~~~~~-~l~~~~~~~~~~~---~~-~~~~~~~~~~~~g~~~~~g~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~~l~~ 154 (280)
T 2e7y_A 80 PEGNR-AVEEYTEFIKRAN---PD-LRFSFNVHPLKEGERVFLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKK 154 (280)
T ss_dssp ETTCH-HHHHHHHHHHHHC---GG-GTTTEEEEEECTTCCEECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEEEEECG
T ss_pred CccHH-HHHHHHHHHhhcc---cC-CCCceEEEEcCCCCEEEeCCcccCCEEEEEEEccCCCCCceEEEEEEEcccccCH
Confidence 99887 6654322111000 00 0011234445 57789998 89999999999973228999873
Q ss_pred -----------------------------cEEEecCCCCCCcchhhcccCCCEEEEcCcCCCCC---CCCCCCHHHHHHH
Q 023686 180 -----------------------------NICYISDVSEIPEETYPFLQDCEILIMDALRPDRS---SSTHFGLPRALEE 227 (278)
Q Consensus 180 -----------------------------~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~---~~~H~~~~~~~~~ 227 (278)
+++|+||+.+. ..+.++++|++++|+++.... ..+|+++.++.++
T Consensus 155 ~~~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~---~~~~~~~~d~li~e~t~~~~~~~~~~~H~t~~~a~~~ 231 (280)
T 2e7y_A 155 EFQGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL---DPEEIRGTELLIHECTFLDARDRRYKNHAAIDEVMES 231 (280)
T ss_dssp GGTTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC---CHHHHTTCSCEEEECCBC--------CCCBHHHHHHH
T ss_pred hhcCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH---HHHhhcCCCEEEEeCCcCChhhHHhcCCCCHHHHHHH
Confidence 69999999876 456678999999999986532 4689999999999
Q ss_pred HHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhC-CCceEEeecCeEEee
Q 023686 228 VRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETE-GLDVQLSYDGLRVPV 276 (278)
Q Consensus 228 ~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~-g~~v~~~~dg~~i~~ 276 (278)
++++++++++++|+++.+.. ...+.+++..+.+ +.++.+++||+++++
T Consensus 232 ~~~~~~~~lvl~H~~~~~~~-~~~~~~~~~~~~~~~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 232 VKAAGVKKVILYHISTRYIR-QLKSVIKKYREEMPDVEILYMDPRKVFEM 280 (280)
T ss_dssp HHHHTCCEEEEESCCGGGHH-HHHHHHHHHHHHCTTSEEEECCTTSCEEC
T ss_pred HHHcCCCEEEEEeecCcCcc-hHHHHHHHHHHhCCCceEEEeCCCceeeC
Confidence 99999999999999986643 2233333333333 468999999999875
No 9
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.92 E-value=2.1e-24 Score=182.40 Aligned_cols=213 Identities=16% Similarity=0.180 Sum_probs=155.0
Q ss_pred ccceeEEEEccCCCCCceEEEecCcchHHH-----------HhhhCCc--CCC----CCcCEEEeecCChhhhCChHHHH
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHS-----------ALRWFPA--YGI----RTIDAVIITHSHADAIGGLDDLR 99 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~~~~-----------~~~~l~~--~~~----~~Id~v~iTH~H~DH~~gl~~l~ 99 (278)
.|++|++|+ .++.+|||||+.+.... ....+.. ..+ .+||+|+|||.|.||++++..+.
T Consensus 10 lGha~~li~----~~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H~DH~~~~~~~~ 85 (264)
T 3rpc_A 10 IRNATGKLT----IKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTHLDHWDDTAINS 85 (264)
T ss_dssp EETTEEEEE----ETTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCCGGGSCHHHHHH
T ss_pred EeCcEEEEE----ECCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCchhhCCCHHHHh
Confidence 478999999 46899999996542100 0000111 111 27899999999999999988776
Q ss_pred hhhccCCCCccEEec-cccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEecCCCCc-------
Q 023686 100 DWTNNVQRHIPIYVA-MRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGY------- 171 (278)
Q Consensus 100 ~~~~~~~~~~~v~~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~H~~~~------- 171 (278)
.. .+.+||++ ......+++.. +. +...+ ++++++++++|+++|+.|+++.
T Consensus 86 ~~-----~~~~v~~~~~~~~~~l~~~g--------------~~--~~~~~-~~~~~~~~~~i~~~pa~H~~~~~~~~p~~ 143 (264)
T 3rpc_A 86 IP-----KSLPIFVQNTADKELITSQG--------------FI--DVRII-FESLEFNGITLRKTGGSHGTVEMYANPVL 143 (264)
T ss_dssp SC-----TTSCEEESSHHHHHHHHHTT--------------CS--CEEEC-SSEEEETTEEEEEECCCSSCHHHHTSTTH
T ss_pred hc-----cCCeEEEeCHHHHHHHHhcC--------------CC--eeEEe-cccEEECCEEEEEeccccCCccccccccc
Confidence 52 46789999 77766665531 11 11223 4688999999999999998742
Q ss_pred -----eeeEEEEc-----cEEEecCCCCCCcchhhcc--cCCCEEEEcCcCCCCC---CCCCCCHHHHHHHHHHhCCCeE
Q 023686 172 -----RSLGFRFG-----NICYISDVSEIPEETYPFL--QDCEILIMDALRPDRS---SSTHFGLPRALEEVRKIQPKRT 236 (278)
Q Consensus 172 -----~~~g~~i~-----~v~~~gD~~~~~~~~~~~~--~~~dili~e~~~~~~~---~~~H~~~~~~~~~~~~l~~~~~ 236 (278)
..+||+++ +++|+||+.+.++ +.+.. .++|++++++...... ...|++++++.++++.++++++
T Consensus 144 ~~~~~~~~g~~i~~~~~~~i~~~GDt~~~~~-~~~~~~~~~~Dv~il~~g~~~~~~~~~~~hm~~~ea~~~~~~l~~~~v 222 (264)
T 3rpc_A 144 APLAGDAMGVIFEAADEPTVYLVGDTVWTSD-VEKALLRFDPNVIIMNTGYAQILGFEDSIIMGTKDIGRMVVRKPEAKI 222 (264)
T ss_dssp HHHHCCCCEEEEECTTSCCEEECCSCCSCHH-HHHHHHHHCCSEEEEECSCBCBTTCSSCSSCCHHHHHHHHHHCTTSEE
T ss_pred cccccccEEEEEEeCCccEEEEECCcCchHH-HHHHHHHhCCCEEEEecCccccccccCCcccCHHHHHHHHHhCCcCeE
Confidence 35899984 8999999998765 33322 2589999999743321 4679999999999999999999
Q ss_pred EEEeeccCCChhhHHHHHHHhhhhCCC--ceEEeecCeEEee
Q 023686 237 LFIGMMHLMDHEKVNEELLKLMETEGL--DVQLSYDGLRVPV 276 (278)
Q Consensus 237 v~~h~~~~~~~~~~~~~~~~~~~~~g~--~v~~~~dg~~i~~ 276 (278)
+++|+..+.......+++++.+++.|+ ++.++.+|+++++
T Consensus 223 i~~H~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 223 IAVHMDTVNHTATSRKDVRKFIKGNNIESHVAVPEDGETITL 264 (264)
T ss_dssp EEESCSSSTTBCSCHHHHHHHHHHTTCTTTEECCCTTCEEEC
T ss_pred EEEccccccccccCHHHHHHHHHHcCCCCcEEecCCCCEEeC
Confidence 999998755443345667777777665 7999999999875
No 10
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.91 E-value=2.3e-23 Score=173.02 Aligned_cols=182 Identities=18% Similarity=0.262 Sum_probs=139.9
Q ss_pred ccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccc
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 116 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~ 116 (278)
-+++|++|+ .++.++|||||.+.. . ...+.+||+|++||.|.||+ |+..+.... .++++||+++.
T Consensus 35 lg~s~~li~----~~~~~iliDpg~~~~-----~--~~~~~~id~VliTH~H~DH~-~~~~l~~~~---~~~~~v~~~~~ 99 (235)
T 3kl7_A 35 IKHGSLMLT----YDNHSIQVDPVSEYA-----D--YTTFPKADIILITHEHGDHL-DPKAIQAVE---KSDTEIIANEN 99 (235)
T ss_dssp EETTEEEEE----ETTEEEEESCCTTTC-----C--TTSSCCCSEEEECCSSTTTC-CHHHHHHHC---CTTCEEEECHH
T ss_pred EcceEEEEE----ECCEEEEECCCCCcc-----c--hhhCCCCCEEEECCCccccC-CHHHHHHhh---cCCCEEEEcHH
Confidence 388999999 467899999998641 1 12456899999999999999 777766532 25689999998
Q ss_pred cHHHHHhccccccccccccCCCCccceeeeec-cCC-ceeecceEEEEEEecCCCCc--------eeeEEEEc----cEE
Q 023686 117 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEE-PFTVQDLKITPLPVWHGAGY--------RSLGFRFG----NIC 182 (278)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~g~~~i~~~~~~H~~~~--------~~~g~~i~----~v~ 182 (278)
..+.+.+ ...+ +++ ++++++++|+++|+.|++.. .+.||+++ +++
T Consensus 100 ~~~~l~~---------------------~~~l~~g~~~~~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~~g~~i~ 158 (235)
T 3kl7_A 100 SQKKLGK---------------------GKVLKNGDTDTSISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTFDGLRVY 158 (235)
T ss_dssp HHHHHTC---------------------SEECCTTCEECCSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEETTEEEE
T ss_pred HHHHhcC---------------------cEEecCCCEEEEECCEEEEEEEeecCCCccccccCCCCceEEEEEeCCeEEE
Confidence 8776532 1223 567 78899999999999997631 25799996 899
Q ss_pred EecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhCC
Q 023686 183 YISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEG 262 (278)
Q Consensus 183 ~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g 262 (278)
|+||+.+.++ + ..++++|++++++. ...|+++++++++++++++++++++|+.. .. .+++++.+++.|
T Consensus 159 ~~GDt~~~~~-~-~~l~~~Dv~il~~~-----~~~h~~~~ea~~~~~~l~~k~vip~H~~~-~~----~~~~~~~l~~~g 226 (235)
T 3kl7_A 159 IAGDTEDIPE-M-KDLKDIDIAFLPVN-----QPYTMTVSQAAKAARMFSPKILYPYHYGD-TK----IGELKDALKDSG 226 (235)
T ss_dssp ECCSCCSCGG-G-GGCCSCSEEEEECC-----TTTSCCHHHHHHHHHHHCCSEEEEESCTT-CC----TTHHHHHTTTSC
T ss_pred EECCCCchhh-H-HhhcCCCEEEECCC-----CCcccCHHHHHHHHHHcCCCEEEEEcCCC-CC----HHHHHHHHhhCC
Confidence 9999998764 3 34678999999885 35799999999999999999999999988 32 344556566666
Q ss_pred CceE
Q 023686 263 LDVQ 266 (278)
Q Consensus 263 ~~v~ 266 (278)
+++.
T Consensus 227 i~v~ 230 (235)
T 3kl7_A 227 IDVR 230 (235)
T ss_dssp CEEC
T ss_pred CEEE
Confidence 5554
No 11
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.90 E-value=8.1e-23 Score=180.18 Aligned_cols=220 Identities=16% Similarity=0.160 Sum_probs=147.2
Q ss_pred ccceeEEEEccCCCCCceEEEe--cCcchH----------HHHh-----hh-----------CCcCCCCCcCEEEeecCC
Q 023686 37 RLNTSILIRYPGPSGRRNILID--AGKFFY----------HSAL-----RW-----------FPAYGIRTIDAVIITHSH 88 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD--~G~~~~----------~~~~-----~~-----------l~~~~~~~Id~v~iTH~H 88 (278)
-|++|++|+. .++.+|||| +|.+.. .++. +. +...++.+||+|||||.|
T Consensus 43 lG~s~~lI~~---~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~~~l~~id~VliTH~H 119 (360)
T 2wyl_A 43 LGCTGIWLKS---EGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDPFAIRQIDAVLATHDH 119 (360)
T ss_dssp EETTEEEEEC---TTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCGGGCCCCSEEECSBSC
T ss_pred ecccEEEEEe---CCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCHHHcCCCCEEEECCCc
Confidence 4889999993 137899999 776431 0111 01 111234689999999999
Q ss_pred hhhhC--ChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEe
Q 023686 89 ADAIG--GLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPV 165 (278)
Q Consensus 89 ~DH~~--gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~ 165 (278)
.||++ ++..+.+.+ .++++||++....+.+++.. +...++..+ .++.+++++++|+++++
T Consensus 120 ~DHig~~~l~~l~~~~---~~~~~v~~p~~~~~~l~~~g--------------~~~~~~~~l~~g~~~~~g~~~v~~~~~ 182 (360)
T 2wyl_A 120 NDHIDVNVAAAVMQNC---ADDVPFIGPKTCVDLWIGWG--------------VPKERCIVVKPGDVVKVKDIEIHALDA 182 (360)
T ss_dssp TTTCCHHHHHHHHHHS---CTTCCEEECHHHHHHHHHHT--------------CCGGGEEECCTTCEEEETTEEEEEEEC
T ss_pred hhcCCHHHHHHHHhcC---CCCCEEEEcHHHHHHHHHcC--------------CChheEEEcCCCCEEEECCEEEEEEec
Confidence 99994 233333322 12689999998877776521 111133444 56789999999999999
Q ss_pred cCCC------------C-------ceeeEEEEc----cEEEecCCCCCCcchhhcc--cCCCEEEEcCcCCCCCCCCCCC
Q 023686 166 WHGA------------G-------YRSLGFRFG----NICYISDVSEIPEETYPFL--QDCEILIMDALRPDRSSSTHFG 220 (278)
Q Consensus 166 ~H~~------------~-------~~~~g~~i~----~v~~~gD~~~~~~~~~~~~--~~~dili~e~~~~~~~~~~H~~ 220 (278)
.|.+ + ..++||+++ +++|+||+.+.++ +.... .++|++++...........|++
T Consensus 183 ~H~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~-~~~i~~~~~~Dv~il~~g~~~~~~~~h~~ 261 (360)
T 2wyl_A 183 FDRTALITLPADQKAAGVLPDGMDDRAVNYLFKTPGGSLYHSGDSHYSNY-YAKHGNEHQIDVALGSYGENPRGITDKMT 261 (360)
T ss_dssp CCC------------------CCTTTBEEEEEEETTEEEEECTTCCCCTT-HHHHHHHSCCCEEEEEBCCCCTTCCCSBC
T ss_pred cCcccccccccccccccccccccCcccEEEEEEECCcEEEEeCCCCcCHH-HHHHhhCCCCCEEEecCCCCcccccCCCC
Confidence 8863 1 247899995 8999999988654 32222 2689998876532223457999
Q ss_pred HHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhh------CCCceEEeecCeEEeec
Q 023686 221 LPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMET------EGLDVQLSYDGLRVPVM 277 (278)
Q Consensus 221 ~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~------~g~~v~~~~dg~~i~~~ 277 (278)
..+++++++++++++++++|+..........+++.+.+++ .+.++.++.+|+++++.
T Consensus 262 ~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~ 324 (360)
T 2wyl_A 262 SADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWP 324 (360)
T ss_dssp HHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEET
T ss_pred HHHHHHHHHHhCCCEEEEEeeccccccCCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEec
Confidence 9999999999999999999987754321112233333331 24578889999998874
No 12
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.90 E-value=1.1e-22 Score=180.46 Aligned_cols=222 Identities=15% Similarity=0.134 Sum_probs=148.5
Q ss_pred ccceeEEEEccCCCCCceEEEe--cCcchH----------HHHhh----------------hCCcCCCCCcCEEEeecCC
Q 023686 37 RLNTSILIRYPGPSGRRNILID--AGKFFY----------HSALR----------------WFPAYGIRTIDAVIITHSH 88 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD--~G~~~~----------~~~~~----------------~l~~~~~~~Id~v~iTH~H 88 (278)
-|++|++|+. .++.+|||| +|.+.. .++.+ .+...++.+||+|||||.|
T Consensus 67 lG~s~~lI~~---~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~~~~~~~iD~IliTH~H 143 (379)
T 3bv6_A 67 LGCTGIWLKS---AGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLDPFAIKEIDAVLASHDH 143 (379)
T ss_dssp EETTEEEEEE---TTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSCGGGCCCCSEEECSBCS
T ss_pred ecccEEEEEe---CCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccChHHCCCCCEEEECCCC
Confidence 4889999994 237899999 665421 01110 1211235689999999999
Q ss_pred hhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEecC
Q 023686 89 ADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVWH 167 (278)
Q Consensus 89 ~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~H 167 (278)
.||+ |++.+........++++||++....+.+++.. +...++..+ +++.+++++++|+++++.|
T Consensus 144 ~DHi-g~~~l~~l~~~~~~~~~v~~~~~~~~~l~~~g--------------~~~~~~~~l~~g~~~~~g~~~v~~~~~~H 208 (379)
T 3bv6_A 144 ADHI-DVNVAAAVLQNCGEHVKFIGPQACVDLWLGWG--------------VPQERCIVAKVGDVLEIGDVKIRVLDSFD 208 (379)
T ss_dssp GGGC-CHHHHHHHHHHSCTTCEEEECHHHHHHHHHHT--------------CCGGGEEECCTTCEEEETTEEEEEEECCC
T ss_pred cccC-ChHHHHHHHhcCCCCcEEEecHHHHHHHHHcC--------------CChhhEEEeCCCCEEEECCEEEEEEeccc
Confidence 9999 44433322211112689999998877776521 111133444 5678999999999999988
Q ss_pred CC-------------C-------ceeeEEEEc----cEEEecCCCCCCcchhhcc--cCCCEEEEcCcCCCCCCCCCCCH
Q 023686 168 GA-------------G-------YRSLGFRFG----NICYISDVSEIPEETYPFL--QDCEILIMDALRPDRSSSTHFGL 221 (278)
Q Consensus 168 ~~-------------~-------~~~~g~~i~----~v~~~gD~~~~~~~~~~~~--~~~dili~e~~~~~~~~~~H~~~ 221 (278)
.+ + ..++||+++ +++|+||+.+.++ +.... .++|++++...........|++.
T Consensus 209 ~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~~g~~i~~sGDt~~~~~-~~~i~~~~~~Dv~il~~g~~~~~~~~h~~~ 287 (379)
T 3bv6_A 209 RTALVTLPKGVSSYDKAILDGMDERAVNYLIETSGGSVYHSGDSHYSNY-YAKHGNDYQIDVALLSYGENPRGVTDKMTS 287 (379)
T ss_dssp HHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEETTEEEEECTTCCCCTT-HHHHHHHSCCSEEEEEBCCCCTTCCCSBCH
T ss_pred ccccccccccccccccccccccCCceEEEEEEeCCeEEEEeCCCCccHH-HHHHhhcCCCCEEEecCCCCcccccccCCH
Confidence 41 1 147999995 8999999988654 32222 26899998765422234679999
Q ss_pred HHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhh---h---CCCceEEeecCeEEeec
Q 023686 222 PRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLME---T---EGLDVQLSYDGLRVPVM 277 (278)
Q Consensus 222 ~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~---~---~g~~v~~~~dg~~i~~~ 277 (278)
.+++++++++++++++++|+..........+++++.++ + .+.++.++.+|+++++.
T Consensus 288 ~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~ 349 (379)
T 3bv6_A 288 SDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYP 349 (379)
T ss_dssp HHHHHHHHHHTCSEEEEESTTSBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEET
T ss_pred HHHHHHHHHcCCCEEEEEeecccccccCCHHHHHHHHHhhhhhhcCCCceEEccCCcEEEec
Confidence 99999999999999999998765432111233333333 1 24578889999999874
No 13
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.89 E-value=1.2e-21 Score=176.67 Aligned_cols=215 Identities=15% Similarity=0.143 Sum_probs=141.5
Q ss_pred cccceeEEEEccCCCCCceEEEecCcchHH----------HHh-----hhCC--------------cCCCCCcCEEEeec
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKFFYH----------SAL-----RWFP--------------AYGIRTIDAVIITH 86 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~~~~----------~~~-----~~l~--------------~~~~~~Id~v~iTH 86 (278)
..+++|++|+ .+++.+|||||.+... ++. +.++ .....+|++|||||
T Consensus 17 ~~g~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~i~~v~lTH 92 (429)
T 2az4_A 17 TIGGTVIEVA----YKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDYQHTAVFLSH 92 (429)
T ss_dssp SSSCCEEEEE----ETTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCCSEEEEECSC
T ss_pred ccCCeEEEEE----ECCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccccCCEEEECC
Confidence 4567889999 4678999999986410 011 1110 23467899999999
Q ss_pred CChhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEe
Q 023686 87 SHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPV 165 (278)
Q Consensus 87 ~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~ 165 (278)
.|.||++|++.+.+ +.+||+++.+.+.++......................+..+ +++.+++++++|+++++
T Consensus 93 ~H~DHiggl~~l~~-------~~~iy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~ 165 (429)
T 2az4_A 93 AHLDHSRMINYLDP-------AVPLYTLKETKMILNSLNRKGDFLIPSPFEEKNFTREMIGLNKNDVIKVGEISVEIVPV 165 (429)
T ss_dssp SCHHHHTTGGGBCT-------TSCEEEEHHHHHHHHHHTTTSCSSCCCTTSCTTCCCCCEEECTTCEEEETTEEEEEEEC
T ss_pred chHHHhCcHhHhcC-------CCCEEECHHHHHHHHHHHHhCccccccccccccccceEEEeCCCCeEEECCEEEEEEEC
Confidence 99999999999853 46899999988877653221100000000000012234445 56789999999999999
Q ss_pred cCCCCceeeEEEEc----cEEEecCCCCCCc------chhhcccCCCEEEEcCcCCCCC-------CCCCCCHHHHHHHH
Q 023686 166 WHGAGYRSLGFRFG----NICYISDVSEIPE------ETYPFLQDCEILIMDALRPDRS-------SSTHFGLPRALEEV 228 (278)
Q Consensus 166 ~H~~~~~~~g~~i~----~v~~~gD~~~~~~------~~~~~~~~~dili~e~~~~~~~-------~~~H~~~~~~~~~~ 228 (278)
.|+. ..+++|++. +++|+||+..... .+.+..+++|++++|+++.... ..+|.+..++.+.+
T Consensus 166 ~H~~-~gs~~~~i~~~~~~i~~tGD~~~~~~~~~~~~~~~~~~~~~d~Li~Est~~~~~~~~~~~~~~~~~s~~~~~~~i 244 (429)
T 2az4_A 166 DHDA-YGASALLIRTPDHFITYTGDLRLHGHNREETLAFCEKAKHTELLMMEGVSISFPEREPDPAQIAVVSEEDLVQHL 244 (429)
T ss_dssp CCSS-TTCEEEEEEETTEEEEECCSCCSSSTTHHHHHHHHHHHTTCSEEEEECCGGGSCCCCCCTTBCCCCSHHHHHHHH
T ss_pred CCCC-hhhEEEEEEeCCcEEEECCCcccCCCchHHHHHHHHhccCCCEEEECCCCcCcccccccccCCCCCCHHHHHHHH
Confidence 9953 268999885 8999999965322 3555567899999999986522 23488888776555
Q ss_pred HHh---CCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEE
Q 023686 229 RKI---QPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQL 267 (278)
Q Consensus 229 ~~l---~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~ 267 (278)
.++ ..++++++|+... . .+++++.+++.|.++.+
T Consensus 245 ~~~~~~~~~rlil~h~~~~-~----~~r~~~~a~~~gr~v~~ 281 (429)
T 2az4_A 245 VRLELENPNRQITFNGYPA-N----VERFAKIIEKSPRTVVL 281 (429)
T ss_dssp HHHHHTCSSSCEEEEECTT-C----HHHHHHHHHHCSSEEEE
T ss_pred HHHHHhCCCcEEEEEeccc-h----HHHHHHHHHHhCCEEEE
Confidence 543 3567888886642 2 23334446677766544
No 14
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.87 E-value=3.9e-21 Score=173.06 Aligned_cols=213 Identities=18% Similarity=0.194 Sum_probs=138.1
Q ss_pred CCCCcccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcC--CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCc
Q 023686 32 GNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAY--GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHI 109 (278)
Q Consensus 32 ~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~--~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~ 109 (278)
|+..+.+++|++|+ .+++.+|||||........+.+... .+.+||+|||||+|.||++|++.+.+.. .+.
T Consensus 7 G~~~~vg~s~~li~----~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~~----~~~ 78 (431)
T 3iek_A 7 GAAREVTGSAHLLL----AGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFREG----YRG 78 (431)
T ss_dssp SCSSSSSCCCEEEE----ETTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHTT----CCS
T ss_pred CCCCCCCCcEEEEE----ECCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHcC----CCC
Confidence 44556788999999 4689999999984322222333333 3578999999999999999999998753 367
Q ss_pred cEEeccccHHHHHhcccccccccc--ccCCCCcc--ceeeeec-cCCceeecceEEEEEEecCCCCceeeEEEEc----c
Q 023686 110 PIYVAMRDFEVMKKTHYYLVDTSG--IIPGAAVS--ELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGFRFG----N 180 (278)
Q Consensus 110 ~v~~~~~~~~~l~~~~~~~~~~~~--~~~~~~~~--~~~~~~~-~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~----~ 180 (278)
+||+++.+.+.++........... .+....+. ...+..+ .++.+++++++++++++.|.+ ++.+|.+. +
T Consensus 79 ~Iy~t~~t~~l~~~~l~d~~~~~~~~~y~~~~~~~~~~~~~~l~~~~~~~l~g~~v~~~~agH~~--Gs~~~~i~~~~~~ 156 (431)
T 3iek_A 79 PVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEEALGHLRPLEYGEWLRLGALSLAFGQAGHLP--GSAFVVAQGEGRT 156 (431)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHCSSCSSCHHHHHHHHHTEEECCTTCCEEETTEEEEEEECCSST--TCEEEEEEETTEE
T ss_pred eEEEcHHHHHHHHHHHHHHHhhcccCCCCHHHHHHHHhccEEcCCCCeEEeCCEEEEEEeCCCCc--CceEEEEEECCEE
Confidence 899999988776643221110000 00000000 0123445 467889999999999999988 67888885 7
Q ss_pred EEEecCCCCCCcchh---hcccCCCEEEEcCcCCCCCCCCCCCHHH----HHHHHHHh--CCCeEEEEeeccCCChhhHH
Q 023686 181 ICYISDVSEIPEETY---PFLQDCEILIMDALRPDRSSSTHFGLPR----ALEEVRKI--QPKRTLFIGMMHLMDHEKVN 251 (278)
Q Consensus 181 v~~~gD~~~~~~~~~---~~~~~~dili~e~~~~~~~~~~H~~~~~----~~~~~~~l--~~~~~v~~h~~~~~~~~~~~ 251 (278)
++|+||+...++... ....++|++++|++|.+.. |....+ +.+.+++. ...++++..+. ....++..
T Consensus 157 ilfsGD~~~~~~~~l~~~~~~~~~D~LI~EsTy~~~~---h~~~~~~~~~l~~~i~~~~~~gg~vlIp~fa-~gR~qell 232 (431)
T 3iek_A 157 LVYSGDLGNREKDVLPDPSLPPLADLVLAEGTYGDRP---HRPYRETVREFLEILEKTLSQGGKVLIPTFA-VERAQEIL 232 (431)
T ss_dssp EEECCCCCCTTSSSSCCCCBCCCCSEEEEECTTTTCC---CCCHHHHHHHHHHHHHHHHHTTCEEEEECCT-TTHHHHHH
T ss_pred EEEeCCCCCCCCcccCCccccCCccEEEEEcccCCcC---CCChHHHHHHHHHHHHHHHHcCCeEEEEecc-chHHHHHH
Confidence 999999987655443 4566899999999997654 333333 34444432 33455554433 44444444
Q ss_pred HHHHHhh
Q 023686 252 EELLKLM 258 (278)
Q Consensus 252 ~~~~~~~ 258 (278)
..+.+..
T Consensus 233 ~~l~~~~ 239 (431)
T 3iek_A 233 YVLYTHG 239 (431)
T ss_dssp HHHHHHG
T ss_pred HHHHHHH
Confidence 4444444
No 15
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.85 E-value=2.5e-20 Score=172.33 Aligned_cols=212 Identities=18% Similarity=0.248 Sum_probs=142.5
Q ss_pred CCCCcccceeEEEEccCCCCCceEEEecCcchHHH-H---------hhhCCcCCCCCcCEEEeecCChhhhCChHHHHhh
Q 023686 32 GNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHS-A---------LRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDW 101 (278)
Q Consensus 32 ~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~-~---------~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~ 101 (278)
|+..+.|.+|++|+. +++.+|||||..+... . .+.+ .....+||+||+||+|.||++|++.+.+.
T Consensus 15 Gg~~eiG~n~~li~~----~~~~iLID~G~~~~~~~~~g~d~iip~~~~l-~~~~~~Id~I~lTH~H~DHiggl~~l~~~ 89 (555)
T 3zq4_A 15 GGLGEIGKNTYAVQF----QDEIVLIDAGIKFPEDELLGIDYVIPDYTYL-VKNEDKIKGLFITHGHEDHIGGIPYLLRQ 89 (555)
T ss_dssp ESBSSSSCCEEEEEE----TTEEEEEEECCBCCCTTSTTCSEEEECCHHH-HTTTTTEEEEEESCCCHHHHTTHHHHHTT
T ss_pred CCCCccCCEEEEEEE----CCeEEEEeCCCCCCccccccccccccCHHHH-hcCccCCCEEEECCCchhhhCCHHHHHHh
Confidence 455577889999994 6799999999753111 0 1111 12457999999999999999999999875
Q ss_pred hccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEecCCCCceeeEEEEc-
Q 023686 102 TNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGFRFG- 179 (278)
Q Consensus 102 ~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~- 179 (278)
+ +.+||+++.+.+.++....... ......+..+ +++.+++++++++++++.|+. ..+++|.+.
T Consensus 90 ~-----~~pIy~t~~t~~ll~~~l~~~~---------~~~~~~~~~v~~g~~~~ig~~~v~~~~~~H~~-pgs~~~~i~~ 154 (555)
T 3zq4_A 90 V-----NIPVYGGKLAIGLLRNKLEEHG---------LLRQTKLNIIGEDDIVKFRKTAVSFFRTTHSI-PDSYGIVVKT 154 (555)
T ss_dssp C-----CCCEEECHHHHHHHHHHHHHHS---------TTTTCCEEECCTTCCEEETTEEEEEEEEBCSS-SSEEEEEEEE
T ss_pred c-----CceEEECHHHHHHHHHHHHHcC---------ccCCCceEEeCCCCEEEECCEEEEEEeCCCCC-cCcEEEEEEE
Confidence 4 5789999998887765432210 0011234455 578899999999999999954 268888884
Q ss_pred ---cEEEecCCCCCCcch-----hhcc-----cCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh---CCCeEEEEeecc
Q 023686 180 ---NICYISDVSEIPEET-----YPFL-----QDCEILIMDALRPDRSSSTHFGLPRALEEVRKI---QPKRTLFIGMMH 243 (278)
Q Consensus 180 ---~v~~~gD~~~~~~~~-----~~~~-----~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l---~~~~~v~~h~~~ 243 (278)
+++|+||+....... ...+ +++|++++|+++...... ..+-.++.+.+.++ ...++++.++..
T Consensus 155 ~~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~~~-~~se~~v~~~i~~~~~~~~grvii~~fas 233 (555)
T 3zq4_A 155 PPGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENPEF-TMSERRVGESIHDIFRKVDGRIIFATFAS 233 (555)
T ss_dssp TTEEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCCSC-CCCHHHHHHHHHHHHHHCCSCEEEECCTT
T ss_pred CCcEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCCCC-CCCHHHHHHHHHHHHHhCCCEEEEEEChh
Confidence 899999997533211 1111 469999999999764332 34444455444443 356777776553
Q ss_pred CCChhhHHHHHHHhhhhCCCceEE
Q 023686 244 LMDHEKVNEELLKLMETEGLDVQL 267 (278)
Q Consensus 244 ~~~~~~~~~~~~~~~~~~g~~v~~ 267 (278)
... -..++.+.+++++.++.+
T Consensus 234 nv~---R~q~il~~a~~~gr~v~v 254 (555)
T 3zq4_A 234 NIH---RLQQVIEAAVQNGRKVAV 254 (555)
T ss_dssp CHH---HHHHHHHHHHTTTCEEEE
T ss_pred HHH---HHHHHHHHHHHHCCEEEE
Confidence 322 134666777778766654
No 16
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.84 E-value=9.1e-21 Score=175.95 Aligned_cols=217 Identities=18% Similarity=0.231 Sum_probs=141.3
Q ss_pred CCCCcccceeEEEEccCCCCCceEEEecCcchHHHH-------hhhCC--cCCCCCcCEEEeecCChhhhCChHHHHhhh
Q 023686 32 GNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSA-------LRWFP--AYGIRTIDAVIITHSHADAIGGLDDLRDWT 102 (278)
Q Consensus 32 ~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~-------~~~l~--~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~ 102 (278)
|+..+.+.+|++|+. +++.+|||||.++...- .+.+. .....+||+|||||.|.||++|++.+.+.+
T Consensus 23 Gg~~eig~n~~li~~----~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~DHiggl~~L~~~~ 98 (562)
T 3bk2_A 23 GGMGEIGKNITVFRF----RDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLIEHRHKIKAWVLTHGHEDHIGGLPFLLPMI 98 (562)
T ss_dssp ESBSBSSCCEEEEEE----TTEEEEECCCCBCCCTTSTTCCEEEECCHHHHHTGGGEEEEECCCCCHHHHTTHHHHHHHH
T ss_pred cCCCCcCCCEEEEEE----CCeEEEEECCCCCCccccccccccccchhhhhcCcccCcEEEECCCChHHhCCHHHHHHhh
Confidence 334567889999994 67899999997532110 00111 123568999999999999999999998865
Q ss_pred ccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecc-eEEEEEEecCCCCceeeEEEEc-
Q 023686 103 NNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQD-LKITPLPVWHGAGYRSLGFRFG- 179 (278)
Q Consensus 103 ~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~-~~i~~~~~~H~~~~~~~g~~i~- 179 (278)
.....+.+||+++.+.+.++...... . . ......+..+ +++.+++++ ++|+++++.|.. ..+++|.+.
T Consensus 99 ~~~~~~~pIy~~~~t~~~l~~~l~~~-~---~----~~~~~~~~~v~~g~~~~lg~~~~v~~~~~~H~~-~gs~~~~i~~ 169 (562)
T 3bk2_A 99 FGKESPVPIYGARLTLGLLRGKLEEF-G---L----RPGAFNLKEISPDDRIQVGRYFTLDLFRMTHSI-PDNSGVVIRT 169 (562)
T ss_dssp HCSCCCSEEEEEHHHHHHHHHHHHHT-T---C----CSTTSEEEEECTTCEEEETTTEEEEEEECCCSS-SSCEEEEEEE
T ss_pred ccccCCceEEeCHHHHHHHHHHHHHc-C---C----CcCCceEEEECCCCEEEeCCCEEEEEEECCCCC-cccEEEEEEE
Confidence 22223689999999888776543211 0 0 0001234455 567899998 999999999964 268999884
Q ss_pred ---cEEEecCCCCCCc----------chhhcc-cCCCEEEEcCcCCCCCCCCCCCH----HHHH-HHHHHhCCCeEEEEe
Q 023686 180 ---NICYISDVSEIPE----------ETYPFL-QDCEILIMDALRPDRSSSTHFGL----PRAL-EEVRKIQPKRTLFIG 240 (278)
Q Consensus 180 ---~v~~~gD~~~~~~----------~~~~~~-~~~dili~e~~~~~~~~~~H~~~----~~~~-~~~~~l~~~~~v~~h 240 (278)
+++|+||+..... .+.+.. +++|++++|+++.... +|... .+.+ +.+++ ..++++++|
T Consensus 170 ~~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~~--g~~~~e~~v~~~l~~~~~~-~~grvii~~ 246 (562)
T 3bk2_A 170 PIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAERP--GYTPSEMEIAKELDRVIGR-APGRVFVTT 246 (562)
T ss_dssp TTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTCC--SCCCCHHHHHHHHHHHHHH-CSSCEEEEC
T ss_pred CCeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCCC--CCCChHHHHHHHHHHHHHh-CCCEEEEEE
Confidence 8999999864221 111122 5799999999986533 33332 2222 33333 347888998
Q ss_pred eccCCChhhHHHHHHHhhhhCCCceEE
Q 023686 241 MMHLMDHEKVNEELLKLMETEGLDVQL 267 (278)
Q Consensus 241 ~~~~~~~~~~~~~~~~~~~~~g~~v~~ 267 (278)
+.+.... ..++.+.+++.+.++.+
T Consensus 247 fas~~~r---~q~il~~a~~~~r~V~v 270 (562)
T 3bk2_A 247 FASHIHR---IQSVIWAAEKYGRKVAM 270 (562)
T ss_dssp CTTCHHH---HHHHHHHHHHTTCEEEE
T ss_pred ccccchH---HHHHHHHHHHhCCEEEE
Confidence 7764432 34455666677766655
No 17
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.83 E-value=8.7e-20 Score=172.01 Aligned_cols=229 Identities=20% Similarity=0.221 Sum_probs=139.1
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchH-----HHHhhhCC--cC--CC--CCcCEEEeecCChhhhCChHHHHhhhc
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFY-----HSALRWFP--AY--GI--RTIDAVIITHSHADAIGGLDDLRDWTN 103 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~-----~~~~~~l~--~~--~~--~~Id~v~iTH~H~DH~~gl~~l~~~~~ 103 (278)
...+++|++|+. ++..+|||||.+.. ....+.+. .. ++ .+||+|||||+|.||++|++.+.+..
T Consensus 198 ~~vg~s~~LI~~----~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DHiGglp~L~~~~- 272 (651)
T 3af5_A 198 REVGRSALLVQT----DESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDHCGMLPYLFRYN- 272 (651)
T ss_dssp SSSSCCEEEEEE----SSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHHHTTHHHHHHTT-
T ss_pred CCCCCcEEEEEE----CCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHhhcCHHHHHhcC-
Confidence 345789999994 67899999998742 12222221 02 34 78999999999999999999998731
Q ss_pred cCCCCccEEeccccHHHHHhccccccccc---cccCCCC---cc--ceeeeec-cCCceee-cceEEEEEEecCCCCcee
Q 023686 104 NVQRHIPIYVAMRDFEVMKKTHYYLVDTS---GIIPGAA---VS--ELQFNII-DEEPFTV-QDLKITPLPVWHGAGYRS 173 (278)
Q Consensus 104 ~~~~~~~v~~~~~~~~~l~~~~~~~~~~~---~~~~~~~---~~--~~~~~~~-~~~~~~~-g~~~i~~~~~~H~~~~~~ 173 (278)
..+.+||+++.+.+.+........... ....... +. ...+..+ .++.+++ ++++++++++.|.+ ++
T Consensus 273 --~~~~pIy~t~~t~~ll~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~--Gs 348 (651)
T 3af5_A 273 --LFDGPIYTTPPTRDLMVLLQKDFIEIQQSNGQDPLYRPRDIKEVIKHTITLDYGEVRDISPDIRLTLHNAGHIL--GS 348 (651)
T ss_dssp --CCCSCEEECHHHHHHHHHHHHHHHHHHHHTTCCCSSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSST--TC
T ss_pred --CCCceEEEcHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHhhhcEEEeCCCCEEEecCCEEEEEecCCCCc--Cc
Confidence 014789999988876653321110000 0000000 00 0123444 5678999 99999999999987 56
Q ss_pred eEEEEc------cEEEecCCCCCCcchhh----cccCCCEEEEcCcCCCCCCCCCCCHHH----HHHHHHHh--CCCeEE
Q 023686 174 LGFRFG------NICYISDVSEIPEETYP----FLQDCEILIMDALRPDRSSSTHFGLPR----ALEEVRKI--QPKRTL 237 (278)
Q Consensus 174 ~g~~i~------~v~~~gD~~~~~~~~~~----~~~~~dili~e~~~~~~~~~~H~~~~~----~~~~~~~l--~~~~~v 237 (278)
++|.+. +++|+||+...++.+.. ...++|+|++|+++.... ..|.+..+ +.+.+++. ...+++
T Consensus 349 ~~~~i~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~EsT~~~~~-~~h~s~~~~~~~l~~~i~~~l~~~g~vl 427 (651)
T 3af5_A 349 AIVHLHIGNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGGAN-DIQMPREEAEKRLIEVIHNTIKRGGKVL 427 (651)
T ss_dssp EEEEEEETTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECTTCSTT-CCCCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EEEEEEECCCceEEEEeCCCCCCcccccccccccCCCCCEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHhCCCEEE
Confidence 777774 79999999876553333 346799999999997643 12444333 34444432 334544
Q ss_pred EEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEE
Q 023686 238 FIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRV 274 (278)
Q Consensus 238 ~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i 274 (278)
+..+. ....++....+.+..++..+++.+..||+..
T Consensus 428 Ip~fa-vgR~qell~~l~~~~~~~~l~~~I~~dg~a~ 463 (651)
T 3af5_A 428 IPAMA-VGRAQEVMMVLEEYARIGGIEVPIYLDGMIW 463 (651)
T ss_dssp EECCT-TTHHHHHHHHHHHHHTTTCCCSCEEEESSHH
T ss_pred EeccC-ccHHHHHHHHHHHhhhhcCCCCcEEEechHH
Confidence 44433 4444444444444443332224445567643
No 18
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.83 E-value=8.4e-20 Score=149.95 Aligned_cols=152 Identities=14% Similarity=0.181 Sum_probs=111.9
Q ss_pred cccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
.++++|++|+ .++..||||||.+.. .+ .....+||+|||||.|.||++ ++.+. ++.+++
T Consensus 17 ~~~~~~~li~----~~~~~iLiD~g~~~~-----~~-~~~~~~id~VliTH~H~DH~~-~~~l~-------~~~~vi--- 75 (220)
T 1vjn_A 17 WFGHACFALE----MEGKTIVTDPFDESV-----GY-PIPNVTADVVTESHQHFDHNA-HHLVK-------GNFRVI--- 75 (220)
T ss_dssp EEETTEEEEE----ETTEEEEESCCC-----------CCCCCBCSEEECSSCC---CG-GGGCB-------SSCEEE---
T ss_pred EccCCEEEEE----ECCEEEEEcCCCCcC-----CC-CcCCCCcCEEEECCCCCCCCC-chHhc-------CCCEEE---
Confidence 4689999999 467999999998631 11 123578999999999999997 66432 122222
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEecCCCC-----ceeeEEEEc----cEEEecC
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAG-----YRSLGFRFG----NICYISD 186 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~H~~~-----~~~~g~~i~----~v~~~gD 186 (278)
..++.+++++++|+++++.|... ..++||+++ +++|+||
T Consensus 76 --------------------------------~~~g~~~~~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~~g~~i~~~GD 123 (220)
T 1vjn_A 76 --------------------------------DRPGAYTVNGVKIKGVETFHDPSHGRERGKNIVFVFEGEGIKVCHLGD 123 (220)
T ss_dssp --------------------------------CSSEEEEETTEEEEEEEEEEC-------CEEEEEEEEETTEEEEECTT
T ss_pred --------------------------------cCCCeEEECCEEEEEEeeecCCCCCccCCCcEEEEEEECCeEEEEeCC
Confidence 11125677899999999999863 146899996 8999999
Q ss_pred CCCCCc-chhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeeccCC
Q 023686 187 VSEIPE-ETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLM 245 (278)
Q Consensus 187 ~~~~~~-~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~ 245 (278)
+.+.++ .....++++|++++++. ...|++++++.++++++++++++++|+....
T Consensus 124 t~~~~~~~~~~~~~~~Dvlil~~g-----~~~h~~~~~a~~~~~~~~~k~vi~~H~~~~~ 178 (220)
T 1vjn_A 124 LGHVLTPAQVEEIGEIDVLLVPVG-----GTYTIGPKEAKEVADLLNAKVIIPMHYKTKY 178 (220)
T ss_dssp CCSCCCHHHHHHHCCCSEEEEECC-----SSSSCCHHHHHHHHHHTTCSEEEEESCCCSS
T ss_pred CCCcchHHHHHhhCCCCEEEEcCC-----CcCcCCHHHHHHHHHhcCCCEEEEEeccccc
Confidence 998764 34555678999999884 3469999999999999999999999998875
No 19
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.83 E-value=1.8e-20 Score=159.84 Aligned_cols=217 Identities=16% Similarity=0.151 Sum_probs=138.8
Q ss_pred cccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCc--CCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEe
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPA--YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 113 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~--~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~ 113 (278)
...++|++|+ .+++.+|||+|++.. +.+.++. ..+.+||+|++||.|+||++|++.+.+.+ ++++||+
T Consensus 30 ~~~g~s~li~----~~~~~iLiD~G~~~~--~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~~----~~~~v~~ 99 (284)
T 2p4z_A 30 AEHGLSLLLK----KGNKEIVVDTGQSEN--FIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLERN----PEVKIYT 99 (284)
T ss_dssp BCSSCEEEEE----ETTEEEEECCCSSTH--HHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHHC----TTCEEEE
T ss_pred cCCEEEEEEE----ECCeEEEEeCCCCHH--HHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHHc----CCCceec
Confidence 3456688888 467899999999742 2222223 34568999999999999999999987654 4689999
Q ss_pred ccccHHHHHhccccccccccccCC--CC---ccceeeeeccCCceeec-c-eEEEEEEecCCCCceee--EEEEccEEEe
Q 023686 114 AMRDFEVMKKTHYYLVDTSGIIPG--AA---VSELQFNIIDEEPFTVQ-D-LKITPLPVWHGAGYRSL--GFRFGNICYI 184 (278)
Q Consensus 114 ~~~~~~~l~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~~~~g-~-~~i~~~~~~H~~~~~~~--g~~i~~v~~~ 184 (278)
++...+ ..+.........+.+ .. ....++..++ +.++++ + ..+..+|..|.. .... .|+++.+.|+
T Consensus 100 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~i~~gi~~i~~~~~~h~~-~~~~g~~~~~~~~~y~ 174 (284)
T 2p4z_A 100 HKEILN---KKYAMRKGGQFEEIGFDLSFYEKYKNNFVLID-KDAEIEEGFYVITNTDITYDN-EFTTKNFFVEKEGKRI 174 (284)
T ss_dssp EGGGGS---CEEEECSSSCEEECSCCHHHHHHHGGGEEEES-SCEEEETTEEEECSCCCCSCC-HHHHTTEEEEETTEEE
T ss_pred CHHHHH---HHhccCccccccccccccchhhhcCceEEEeC-CCeEEeCCEEEEeeeCCcccc-ccCCCceEEEcCCCEe
Confidence 987643 111100000000000 00 0011333343 345554 4 455567776654 1112 4888888899
Q ss_pred cCCCCCCcchhhcccCCC--EEEEcCcC--------------CCCC-----CCCCC------CHHHHHHHHHHhCCCeEE
Q 023686 185 SDVSEIPEETYPFLQDCE--ILIMDALR--------------PDRS-----SSTHF------GLPRALEEVRKIQPKRTL 237 (278)
Q Consensus 185 gD~~~~~~~~~~~~~~~d--ili~e~~~--------------~~~~-----~~~H~------~~~~~~~~~~~l~~~~~v 237 (278)
+|. ++++....++++| +++++|.. .... ...|+ ++.++++.++++++++++
T Consensus 175 ~D~--~~de~~~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~~a~~~~~~~~~~~l~ 252 (284)
T 2p4z_A 175 PDK--FLDEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIARKIEEYGVKKVL 252 (284)
T ss_dssp ECC--CTTCCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHHHHHHHHHHTTBCCEE
T ss_pred cCC--CCCceEEEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHHHHHHHHHcCCCCEEE
Confidence 994 4555677788899 66766541 1111 36698 899999999999999999
Q ss_pred EEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEEee
Q 023686 238 FIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 276 (278)
Q Consensus 238 ~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i~~ 276 (278)
++|+.+... .+++ .+.++.++..++|||+|++
T Consensus 253 l~H~~~~~~----~~~~---~~~~~~~v~~a~~G~~i~l 284 (284)
T 2p4z_A 253 TGHCTGIDE----YGFL---KSVLKDKISYLTTSSSIVV 284 (284)
T ss_dssp ECGGGCHHH----HHHH---HHHHGGGEEECCTTCEEEC
T ss_pred eeCcCcHHH----HHHH---HHHhCCCEEEcCCCcEEeC
Confidence 999876433 2222 3344457999999999975
No 20
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.82 E-value=1.7e-19 Score=169.62 Aligned_cols=227 Identities=16% Similarity=0.167 Sum_probs=139.1
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchH----HHHhhhCC--cCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCC
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFY----HSALRWFP--AYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRH 108 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~----~~~~~~l~--~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~ 108 (278)
...+.+|++|+ .++..+|||||.+.. ....+.+. ...+.+||+|||||+|.||++|++.+.+.. .+
T Consensus 189 ~evg~s~~lI~----~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L~~~~----~~ 260 (636)
T 2ycb_A 189 REVGRSCLYLQ----TPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYLYHYG----YD 260 (636)
T ss_dssp SSSSCCEEEEE----CSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHHHHTT----CC
T ss_pred CCCCCCEEEEE----ECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHHHhcC----CC
Confidence 34578999999 467899999998632 23334333 245679999999999999999999998742 35
Q ss_pred ccEEeccccHHHHHhcccccccc------ccccCCCCcc--ceeeeec-cCCceee-cceEEEEEEecCCCCceeeEEEE
Q 023686 109 IPIYVAMRDFEVMKKTHYYLVDT------SGIIPGAAVS--ELQFNII-DEEPFTV-QDLKITPLPVWHGAGYRSLGFRF 178 (278)
Q Consensus 109 ~~v~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~--~~~~~~~-~~~~~~~-g~~~i~~~~~~H~~~~~~~g~~i 178 (278)
.+||+++.+.+.+.......... ...+....+. ...+..+ .++.+++ ++++++++++.|.+ ++.+|.+
T Consensus 261 ~~Iy~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~g~~~~l~ggi~v~~~~~gH~~--Gs~~~~i 338 (636)
T 2ycb_A 261 GPVYCTAPTRDLMTLLQLDHIDIAHREDEPLPFNVKHVKKSVKHTITLDYGEVTDIAPDIRLTLHNAGHIL--GSAMAHL 338 (636)
T ss_dssp SCEEECHHHHHHHHHHHHHHHHHHHHHTCCCSCCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECCSST--TCEEEEE
T ss_pred CeEEEcchHHHHHHHHHHHHHHhhhhcCCCCCCCHHHHHHHHhceEEeCCCCEEEecCCeEEEEeCCCCCC--CcEEEEE
Confidence 78999998887665322111000 0000000000 0123444 4678999 99999999999987 5677777
Q ss_pred c------cEEEecCCCCCCcchhh----cccCCCEEEEcCcCCCCCCCCCCCH----HHHHHHHHH---hCCCeEEEEee
Q 023686 179 G------NICYISDVSEIPEETYP----FLQDCEILIMDALRPDRSSSTHFGL----PRALEEVRK---IQPKRTLFIGM 241 (278)
Q Consensus 179 ~------~v~~~gD~~~~~~~~~~----~~~~~dili~e~~~~~~~~~~H~~~----~~~~~~~~~---l~~~~~v~~h~ 241 (278)
. +++|+||+.+..+.+.. ...++|++++|+++.... ..|.+. .++.+.+++ .+.+.++++|.
T Consensus 339 ~~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~-~~h~s~~~~~~~l~~~i~~~~~~~g~vlIp~fa 417 (636)
T 2ycb_A 339 HIGDGQHNMVYTGDFKYEQSRLLEAAANRFPRIETLVMESTYGGHE-DVQPSRNRAEKELVKTIYSTLRRGGKILIPVFA 417 (636)
T ss_dssp EETTTTTCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGG-GCCCCHHHHHHHHHHHHHHHHHHTCCEEEECCT
T ss_pred EECCCeEEEEEECCCCCCcccccCCcccCCCCCeEEEECCCCCCCC-CCCCCHHHHHHHHHHHHHHHHHcCCEEEEEECC
Confidence 4 79999999875543332 245799999999997543 124433 334445554 35555555552
Q ss_pred ccCCChhhHHHHHHHhhhhCCC-ceEEeecCeEE
Q 023686 242 MHLMDHEKVNEELLKLMETEGL-DVQLSYDGLRV 274 (278)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~~g~-~v~~~~dg~~i 274 (278)
....++....+.+..+...+ ++.+..||+..
T Consensus 418 --~GR~qell~~l~~~~~~~~~~~~~V~~dg~~~ 449 (636)
T 2ycb_A 418 --VGRAQELMIVLEEYIRTGIIDEVPVYIDGMIW 449 (636)
T ss_dssp --TTHHHHHHHHHHHHHHTTSSCCCCEEEEHHHH
T ss_pred --CcHHHHHHHHHHHHHHhCCCCCCeEEEehHHH
Confidence 33333333334333322111 23444566543
No 21
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.82 E-value=2.1e-19 Score=170.32 Aligned_cols=173 Identities=12% Similarity=0.134 Sum_probs=114.9
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchH----HHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhc-cCCCCc
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFY----HSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTN-NVQRHI 109 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~----~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~-~~~~~~ 109 (278)
...+.+|++|+. ++..||||||.... ....+.+..... +||+|||||+|.||++|++.+...+. ....+.
T Consensus 11 ~ev~~n~~LIe~----~~~~ILID~G~~~~~~~~~~~l~~L~~~~~-~IdaVlLTH~H~DHiGgLp~L~~~~~~g~~~~~ 85 (717)
T 2i7x_A 11 GSGTTVGSVVRF----DNVTLLIDPGWNPSKVSYEQCIKYWEKVIP-EIDVIILSQPTIECLGAHSLLYYNFTSHFISRI 85 (717)
T ss_dssp SSSSCCCEEEEE----TTEEEEECCCCCTTTSCHHHHHHHHHTTGG-GCCEEECCCSSHHHHTTHHHHHHHSHHHHHHTC
T ss_pred CCCCCCEEEEEE----CCeEEEEeCCCCcccchhhhHHHHHHhcCC-CCCEEEECCCChHHHCCHHHHHHhhhhcccCCc
Confidence 357889999994 57899999998641 223233434443 89999999999999999999986531 001257
Q ss_pred cEEeccccHHHHHhccccccccccccCCC--------Ccc--ceeeeec-cCCceee----cceEEEEEEecCCCCceee
Q 023686 110 PIYVAMRDFEVMKKTHYYLVDTSGIIPGA--------AVS--ELQFNII-DEEPFTV----QDLKITPLPVWHGAGYRSL 174 (278)
Q Consensus 110 ~v~~~~~~~~~l~~~~~~~~~~~~~~~~~--------~~~--~~~~~~~-~~~~~~~----g~~~i~~~~~~H~~~~~~~ 174 (278)
+||+++.+...+................. .+. ...+..+ .++.+.+ ++++|+++++.|++ ++.
T Consensus 86 pIY~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~v~~~~~~i~~l~~ge~i~l~~~~ggi~V~~~~aGHs~--Gs~ 163 (717)
T 2i7x_A 86 QVYATLPVINLGRVSTIDSYASAGVIGPYDTNKLDLEDIEISFDHIVPLKYSQLVDLRSRYDGLTLLAYNAGVCP--GGS 163 (717)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHTTSSSSBTTCCSCHHHHHHHHHTSEEECTTCCEEETTTTTTEEEEEEECSSST--TCE
T ss_pred eEEecchhHHHHHHHHHHHHHhhccccccccccccHHHHHhhhhceEEecCCCEEEEeecCCCEEEEEECCCCCC--CcE
Confidence 89999987765433221110000000000 000 0123444 4678898 89999999999997 678
Q ss_pred EEEEc----cEEEecCCCCCCcchh-------------hcccCCCEEEEcCcCCCCC
Q 023686 175 GFRFG----NICYISDVSEIPEETY-------------PFLQDCEILIMDALRPDRS 214 (278)
Q Consensus 175 g~~i~----~v~~~gD~~~~~~~~~-------------~~~~~~dili~e~~~~~~~ 214 (278)
+|++. +++|+||+....+.+. ..+.++|++++|+++....
T Consensus 164 ~~~I~~~~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~ 220 (717)
T 2i7x_A 164 IWCISTYSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSS 220 (717)
T ss_dssp EEEEECSSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCS
T ss_pred EEEEEeCCCEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCC
Confidence 88885 8999999876443221 2355799999999987644
No 22
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.82 E-value=8.2e-19 Score=159.39 Aligned_cols=211 Identities=18% Similarity=0.119 Sum_probs=129.0
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchH---HHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccE
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFY---HSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPI 111 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~---~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v 111 (278)
...+.+|++|+ .++..||||||.... ....+.+...++.+||+|||||.|.||++|++.+....+ .+.+|
T Consensus 21 ~~vg~s~~li~----~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~~~---~~~~i 93 (459)
T 2i7t_A 21 QEVGRSCIILE----FKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQKTS---FKGRT 93 (459)
T ss_dssp SSSSSCEEEEE----ETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHHSS---CCSEE
T ss_pred CCCCCCEEEEE----ECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHhcC---CCCCE
Confidence 34578999999 467899999998521 112222334567799999999999999999999986542 24689
Q ss_pred EeccccHHHHHhcccccccccc------ccCCCCcc--ceeeeec-cCCceeecceEEEEEEecCCCCceeeEEEEc---
Q 023686 112 YVAMRDFEVMKKTHYYLVDTSG------IIPGAAVS--ELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGFRFG--- 179 (278)
Q Consensus 112 ~~~~~~~~~l~~~~~~~~~~~~------~~~~~~~~--~~~~~~~-~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~--- 179 (278)
|+++.+.+.+............ .+....+. ...+..+ .++.+++++++++++++.|.+ ++.+|++.
T Consensus 94 y~t~~t~~l~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~v~~~~~GH~~--Gs~~~~i~~~~ 171 (459)
T 2i7t_A 94 FMTHATKAIYRWLLSDYVKVSNISADDMLYTETDLEESMDKIETINFHEVKEVAGIKFWCYHAGHVL--GAAMFMIEIAG 171 (459)
T ss_dssp EEEHHHHHHHHHHHHHHCC---------CCCHHHHHHHGGGEEEECTTCCEEETTEEEEEEECCSST--TCEEEEEEETT
T ss_pred EechHHHHHHHHHHHHHHHHhcccccccccCHHHHHHHHhccEEeCCCCEEEECCEEEEEEeCCCcc--CcEEEEEEECC
Confidence 9999876654432211100000 00000000 0123444 467889999999999999998 67888875
Q ss_pred -cEEEecCCCCCCcchhh--c--ccCCCEEEEcCcCCCCCCCCCCCHHHH----HHHHHHh--CCCeEEEEeeccCCChh
Q 023686 180 -NICYISDVSEIPEETYP--F--LQDCEILIMDALRPDRSSSTHFGLPRA----LEEVRKI--QPKRTLFIGMMHLMDHE 248 (278)
Q Consensus 180 -~v~~~gD~~~~~~~~~~--~--~~~~dili~e~~~~~~~~~~H~~~~~~----~~~~~~l--~~~~~v~~h~~~~~~~~ 248 (278)
+++|+||+...++.... . ..++|++++|++|.... |....+. .+.+.+. ...++++.- ......+
T Consensus 172 ~~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~~---~~~~~~~~~~l~~~i~~~~~~~g~vlip~-fa~gr~q 247 (459)
T 2i7t_A 172 VKLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTHI---HEKREEREARFCNTVHDIVNRGGRGLIPV-FALGRAQ 247 (459)
T ss_dssp EEEEECCSCCCC-----CCCCCCSSCCSEEEEECTTTTCC---CCCHHHHHHHHHHHHHHHHHTTCEEEEEC-CSSSSHH
T ss_pred cEEEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCCC---CCChHHHHHHHHHHHHHHHHCCCEEEEEe-cchhHHH
Confidence 89999999876543321 1 24799999999997533 4444432 2333321 234544433 2355555
Q ss_pred hHHHHHHHhh
Q 023686 249 KVNEELLKLM 258 (278)
Q Consensus 249 ~~~~~~~~~~ 258 (278)
+....+.+..
T Consensus 248 ell~~l~~~~ 257 (459)
T 2i7t_A 248 ELLLILDEYW 257 (459)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4444444443
No 23
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.82 E-value=1.1e-18 Score=153.57 Aligned_cols=213 Identities=17% Similarity=0.213 Sum_probs=134.1
Q ss_pred CCCCcccccccCCCCCCCccccccccCCCCCcccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEe
Q 023686 5 TSEGIPRVSCLTNPSKKCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVII 84 (278)
Q Consensus 5 ~~~g~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~i 84 (278)
+-+|.-.|+|-|.+ +.+. .+. .+..+++++.. .+..++||+.. ...+.+||+|||
T Consensus 3 ~~~~~~~~~~~~~~-------~~~~--~~~-~~~~~p~~~~~----pG~~ilVD~f~-----------~~~~~~IdaI~l 57 (367)
T 4b87_A 3 AHGGLQRGNKKIPE-------SSNV--GGS-RKKTCPFYKKI----PGTGFTVDAFQ-----------YGVVEGCTAYFL 57 (367)
T ss_dssp -----------------------------C-CCCCCCGGGBC----TTSSEEESCCS-----------SSSCTTCCEEEC
T ss_pred ccccchhhhhcccc-------cccC--CCC-CCCCCceEEEE----CCCeEEEeCCC-----------cCCccCCcEEEE
Confidence 34677777773322 2221 122 23444555442 46889999742 235679999999
Q ss_pred ecCChhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEE
Q 023686 85 THSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPL 163 (278)
Q Consensus 85 TH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~ 163 (278)
||.|.||++|++. ..+.+||+++.+.+.++..... ....+..+ .++.+.+++++|+++
T Consensus 58 TH~H~DHiggl~~--------~~~~pIy~s~~t~~ll~~~l~~-------------~~~~~~~l~~g~~~~ig~~~v~~~ 116 (367)
T 4b87_A 58 THFHSDHYAGLSK--------HFTFPVYCSEITGNLLKNKLHV-------------QEQYIHPLPLDTECIVNGVKVVLL 116 (367)
T ss_dssp CCCCHHHHTTCST--------TCCSCEEECHHHHHHHHHHSCC-------------CGGGEEECCBTSCEEETTEEEEEE
T ss_pred CcChHHHhCCccc--------ccCCcEEECHHHHHHHHHHhcc-------------ccceEEEeCCCCEEEECCEEEEEE
Confidence 9999999999983 1357899999999888764321 11123444 467899999999999
Q ss_pred EecCCCCceeeEEEEc-----cEEEecCCCCCCcchhhcc--cCCCEEEEcCcCCCCCCCCCCCHHHHHH-----HHHHh
Q 023686 164 PVWHGAGYRSLGFRFG-----NICYISDVSEIPEETYPFL--QDCEILIMDALRPDRSSSTHFGLPRALE-----EVRKI 231 (278)
Q Consensus 164 ~~~H~~~~~~~g~~i~-----~v~~~gD~~~~~~~~~~~~--~~~dili~e~~~~~~~~~~H~~~~~~~~-----~~~~l 231 (278)
++.|.+ ++++|++. +++|+||+...++.....+ +++|++++|+++.+.. ..|.+..++.+ ..+.+
T Consensus 117 ~agH~~--gs~~~~i~~~~g~~il~tGD~~~~~~~~~~~l~~~~~D~Li~EsTy~~~~-~~~ps~~~~~~~~~~~i~~~~ 193 (367)
T 4b87_A 117 DANHCP--GAVMILFYLPNGTVILHTGDFRADPSMERSLLADQKVHMLYLDTTYCSPE-YTFPSQQEVIRFAINTAFEAV 193 (367)
T ss_dssp ECSSST--TCEEEEEECTTSCEEEECCSCCCCGGGGGSGGGTSCCCEEEECCTTCSTT-CCCCCHHHHHHHHHHHHHHHH
T ss_pred eCCCcC--CcEEEEEEcCCCcEEEEecCcccCcccchhhhccCCCCEEEEecccCCCC-CCCCCHHHHHHHHHHHHHHHH
Confidence 999977 77888884 4999999987665443344 3799999999998633 35677766654 22222
Q ss_pred --CCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEEeec
Q 023686 232 --QPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYD 270 (278)
Q Consensus 232 --~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~d 270 (278)
+.+.++++...+... .+++.+.+++.|.++.+...
T Consensus 194 ~~~g~~~v~~~a~~igr----~q~ll~ia~~~g~ki~v~~~ 230 (367)
T 4b87_A 194 TLNPHALVVCGTYSIGK----EKVFLAIADVLGSKVGMSQE 230 (367)
T ss_dssp HHCTTEEEEEEESSSCC----HHHHHHHHHHTTCCEECCHH
T ss_pred HhCCCeEEEEccchhHH----HHHHHHHHHHhCCEEEEeHH
Confidence 566666555455444 35666777888877776543
No 24
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.80 E-value=3.1e-19 Score=167.84 Aligned_cols=178 Identities=20% Similarity=0.183 Sum_probs=117.4
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchHH--HHhhhCC--cC-CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCc
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFYH--SALRWFP--AY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHI 109 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~--~~~~~l~--~~-~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~ 109 (278)
...+++|++|+ .++..+|||||.+... ...+.+. .. ++.+||+|||||+|.||++|++.+.+.. .+.
T Consensus 193 ~evg~s~~LI~----~~~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~~~~----~~~ 264 (640)
T 2xr1_A 193 KEVGRSCFLLS----TPESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLFKYG----YEG 264 (640)
T ss_dssp SSSBCCEEEEE----CSSCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHHHTT----CCS
T ss_pred CCCCCcEEEEE----ECCeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHHhcC----CCC
Confidence 34578999999 4678999999986321 2223332 13 5678999999999999999999998731 357
Q ss_pred cEEeccccHHHHHhcccccccc------ccccCCCCcc--ceeeeec-cCCceee-cceEEEEEEecCCCCceeeEEEEc
Q 023686 110 PIYVAMRDFEVMKKTHYYLVDT------SGIIPGAAVS--ELQFNII-DEEPFTV-QDLKITPLPVWHGAGYRSLGFRFG 179 (278)
Q Consensus 110 ~v~~~~~~~~~l~~~~~~~~~~------~~~~~~~~~~--~~~~~~~-~~~~~~~-g~~~i~~~~~~H~~~~~~~g~~i~ 179 (278)
+||+++.+.+.+.......... ...+....+. ...+..+ .++.+++ ++++++++++.|.+ .+.+|.+.
T Consensus 265 ~Iy~t~~t~~ll~~~l~d~~~~~~~~g~~~~~~~~~~~~~~~~~~~l~~g~~i~l~gg~~v~~~~~GH~~--Gs~~~~i~ 342 (640)
T 2xr1_A 265 PVYCTPPTRDLMVLLQLDYIDVAAKEGKKIPYESGMVAKTLKHTIPLDYEEVTDIAPDIKLTFHNAGHIL--GSAISHFH 342 (640)
T ss_dssp CEEECHHHHHHHHHHHHHHHHHHHHHTCCCCSCHHHHHHHHHTEEECCTTCCEEEETTEEEEEEECSSST--TCEEEEEE
T ss_pred eEEECHHHHHHHHHHHHHHHHHhhhcccCCCCCHHHHHHHHhceEEeCCCCEEEecCCEEEEEEcCCCCc--CcEEEEEE
Confidence 8999998877654322110000 0000000000 0123444 5678999 99999999999987 56777774
Q ss_pred ------cEEEecCCCCCCcchhh----cccCCCEEEEcCcCCCCCCCCCCCHHH
Q 023686 180 ------NICYISDVSEIPEETYP----FLQDCEILIMDALRPDRSSSTHFGLPR 223 (278)
Q Consensus 180 ------~v~~~gD~~~~~~~~~~----~~~~~dili~e~~~~~~~~~~H~~~~~ 223 (278)
+++|+||+.+..+.+.. ...++|++++|+++.... ..|.+..+
T Consensus 343 ~~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT~g~~~-~~h~s~~~ 395 (640)
T 2xr1_A 343 IGDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATYGNAN-AFQPALKD 395 (640)
T ss_dssp ETTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTTCSTT-CCCCCHHH
T ss_pred ECCceEEEEEECCCCCCCccccccccccCCCCcEEEECCCCCCCc-cCCCCHHH
Confidence 69999999875543332 245799999999987533 22555443
No 25
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.77 E-value=5.1e-18 Score=142.66 Aligned_cols=183 Identities=14% Similarity=0.160 Sum_probs=119.6
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEec
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVA 114 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~ 114 (278)
..+..+|++|. +++..+|||+|.+.. .+.+ .. ..+|++|++||.|.||++|+..+.+.+ +.+||++
T Consensus 16 ~~~~~~~~li~----~~~~~iLiD~G~~~~---~~~l-~~-~~~i~~vi~TH~H~DH~gg~~~l~~~~-----~~~i~~~ 81 (261)
T 3adr_A 16 FPEIATVYVMC----GEKLTVMIDAGVSNS---IADF-SF-LDKLDYIVLTHLHIDHIGLLPELLQVY-----KAKVLVK 81 (261)
T ss_dssp CGGGSEEEEEE----CSSCEEEECCCCTTC---CCCC-TT-CSCCCEEECSCCSGGGTTTHHHHHHHS-----CCEEEEE
T ss_pred CCCceEEEEEE----cCCcEEEEeCCCCCC---hhhc-CC-CCCCcEEEECCCCccccCCHHHHHHHh-----CCeEEEC
Confidence 35778899997 457899999998742 1222 34 678999999999999999999998764 4789999
Q ss_pred cccHHHHHhcc---c------ccccc-ccccCC--CCccceeeeec-cCCceeecceEEEEEEec-CCCCceeeEEEEcc
Q 023686 115 MRDFEVMKKTH---Y------YLVDT-SGIIPG--AAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFGN 180 (278)
Q Consensus 115 ~~~~~~l~~~~---~------~~~~~-~~~~~~--~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~~ 180 (278)
+...+.+.... . ..+.. ...... .......+..+ +++.+++++.++++++++ |++ .+++|.+++
T Consensus 82 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~--~~~~~~~~~ 159 (261)
T 3adr_A 82 SGFKKYLTSEDGLKKLNESAEKVLGDLYYVYGGLEKKLDQDKVIEVEGNEEFDLGGYRMRLIYTPGHAR--HHMSVLVDD 159 (261)
T ss_dssp TTCTHHHHSHHHHHHHHHHHHHHHTHHHHHHCCCCSCCCGGGEEEECSCCEEECSSSEEEEEECTTSCT--TCEEEEETT
T ss_pred HHHHHHhcCchhHHHHHHHHHHHHHHHHHHhcccccCCCccceEecCCCCEEEECCEEEEEEECCCCCC--ccEEEEECC
Confidence 88776554211 0 00000 000000 01111123334 567889999999999988 887 678888889
Q ss_pred EEEecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeeccCC
Q 023686 181 ICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLM 245 (278)
Q Consensus 181 v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~ 245 (278)
++|+||+.... . ...+..+.. ....+..+.++++.+++++++.+++.|+....
T Consensus 160 ~lf~GD~~~~~--~------~~~~~~~~~----~~~~~~~~~~sl~~l~~l~~~~v~~~H~~~~~ 212 (261)
T 3adr_A 160 FLFTGDSAGAY--F------NGVVIPTTP----PVIDYKMYMESLKRQIELKPKVVGFAHGGLVS 212 (261)
T ss_dssp EEEEETSSCEE--E------TTEEECCCC----SCCCHHHHHHHHHHHHHTCCSEEEETTTEEEC
T ss_pred EEEEcCccccc--c------cccccCCCC----CCCCHHHHHHHHHHHHcCCCCEEEeCCCCccC
Confidence 99999986422 1 112211111 11233445667888888999999999977655
No 26
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.76 E-value=9.9e-18 Score=143.33 Aligned_cols=184 Identities=11% Similarity=0.096 Sum_probs=120.2
Q ss_pred cccceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCcCCCC--CcCEEEeecCChhhhCChHHHHhhhccCCCCccEE
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAYGIR--TIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIY 112 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~~~~~--~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~ 112 (278)
..+.+|++|+ .++..+|||+|.. ....+.+.++..++. +|++||+||.|.||++|+..+.+.. +.+||
T Consensus 52 ~~~~n~~li~----~~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-----~~~v~ 122 (294)
T 3m8t_A 52 TDGIAVYVIK----TSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKET-----GAQLV 122 (294)
T ss_dssp CSSSCCEEEE----ETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHH-----CCEEE
T ss_pred CCCeEEEEEE----ECCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhcc-----CCEEE
Confidence 3567899998 4678999999975 445566666666654 7999999999999999999998753 57899
Q ss_pred eccccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEEc--------cEEE
Q 023686 113 VAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--------NICY 183 (278)
Q Consensus 113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~--------~v~~ 183 (278)
+++...+.+................ ..........+++.+++++.++++++++ |++ .+++|.+. +++|
T Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~--g~~~~~~~~~~~~~~~~~lf 199 (294)
T 3m8t_A 123 AGERDKPLLEGGYYPGDEKNEDLAF-PAVKVDRAVKEGDRVTLGDTTLTAHATPGHSP--GCTSWEMTVKDGKEDREVLF 199 (294)
T ss_dssp EEGGGHHHHHHTCBTTBTTCGGGCC-CCCCCSEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEEEEETTEEEEEEE
T ss_pred EChHHHHHHhcccccCccccccCCC-CCCCCceEeCCCCEEEeCCEEEEEEeCCCCCc--cCEEEEEEccCCCccceEEE
Confidence 9999998887643211110000000 0001122233678899999999998866 777 56777764 5999
Q ss_pred ecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeeccCC
Q 023686 184 ISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLM 245 (278)
Q Consensus 184 ~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~ 245 (278)
+||+.. ...... ...+ + . .....+.+.++.+++++++.+++.|+....
T Consensus 200 ~GD~~~-~~~~~~--~~~~-------~---~-~~~~~~~~sl~~l~~l~~~~v~pgHg~~~~ 247 (294)
T 3m8t_A 200 FCSGTV-ALNRLV--GQPT-------Y---A-GIVDDYRATFAKAKAMKIDVLLGPHPEVYG 247 (294)
T ss_dssp CCCCCC-TTCCCS--SSCS-------S---T-THHHHHHHHHHHHHHSCCSEEECSSGGGTT
T ss_pred EcCccC-CCCcCc--CCCC-------C---C-chHHHHHHHHHHHHCCCCCEEEcCCCChhc
Confidence 999863 221110 0000 0 0 001223456777888889888877866543
No 27
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.76 E-value=1.6e-17 Score=154.02 Aligned_cols=213 Identities=14% Similarity=0.238 Sum_probs=133.9
Q ss_pred cceeEEEEccCCCCCceEEEecCcch------------------------HHHHhhhCCcCCCCCcCEEEeecCChhhhC
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKFF------------------------YHSALRWFPAYGIRTIDAVIITHSHADAIG 93 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~~------------------------~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~ 93 (278)
..+|++|+ .+++.+|||+|... ...+.+.|+..++.+||+|||||.|.||++
T Consensus 17 qg~~~lI~----~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi~~id~vilTH~H~DHig 92 (547)
T 2bib_A 17 GSDAIILE----SNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSVQKLDFILVTHTHSDHIG 92 (547)
T ss_dssp BCCEEEEE----ETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTCCCBSCEECCCSCHHHHT
T ss_pred CceEEEEE----eCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCcccccEEEEcCCCccccC
Confidence 45689998 46789999999752 355667777888889999999999999999
Q ss_pred ChHHHHhhhccCCCCccEEeccccHHHHHhcccccc---ccccccCCCCccceeee--ec-cCCceeecceEEEEEEe--
Q 023686 94 GLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLV---DTSGIIPGAAVSELQFN--II-DEEPFTVQDLKITPLPV-- 165 (278)
Q Consensus 94 gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~---~~~~~~~~~~~~~~~~~--~~-~~~~~~~g~~~i~~~~~-- 165 (278)
|++.+.+.+ +..+||+++.....+......+. .............+.+. .+ .++.+++++++|++++.
T Consensus 93 gl~~l~~~~----~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~g~~~~~g~~~i~~l~~~~ 168 (547)
T 2bib_A 93 NVDELLSTY----PVDRVYLKKYSDSRITNSERLWDNLYGYDKVLQTATETGVSVIQNITQGDAHFQFGDMDIQLYNYEN 168 (547)
T ss_dssp THHHHHHHS----CBSEEECCCCCGGGBSCGGGCTTHHHHHHHHHHHHHHTTCEEECSCCTTTTEEEETTEEEEEESCSC
T ss_pred CHHHHHHhC----CccEEEECcccccccCChHHHHhHHHHHHHHHHHHHHhCCeEEEeecCCCceEecCCeeEEEecCcc
Confidence 999998865 23468888755432211000000 00000000000001111 22 45688999999999873
Q ss_pred -cCCC---------CceeeEEEEc----cEEEecCCCCCCcch---hhcccCCCEEEEcCcC-CCCCCCCCCCHHHHHHH
Q 023686 166 -WHGA---------GYRSLGFRFG----NICYISDVSEIPEET---YPFLQDCEILIMDALR-PDRSSSTHFGLPRALEE 227 (278)
Q Consensus 166 -~H~~---------~~~~~g~~i~----~v~~~gD~~~~~~~~---~~~~~~~dili~e~~~-~~~~~~~H~~~~~~~~~ 227 (278)
.|.. +..+++|+++ +++|+||+....+.. ...+..+|+|++.... +..+ ...++
T Consensus 169 ~~h~~~~~~~~~~~n~~S~vl~i~~~~~~iLftGD~~~~~~~e~~l~~~~~~~DvLkv~HHG~S~~s--------~s~~f 240 (547)
T 2bib_A 169 ETDSSGELKKIWDDNSNSLISVVKVNGKKIYLGGDLDNVHGAEDKYGPLIGKVDLMKFNHHHDTNKS--------NTKDF 240 (547)
T ss_dssp CBCTTSCBCCBSSGGGGCCEEEEEETTEEEEECTTCCSTTSHHHHHHHHHCCCSEEECTTTTBCSSS--------SCHHH
T ss_pred ccCccccccccCCCCCCcEEEEEEECCEEEEecCCccchhhhhhhhcccccceeEEEeccccCcccC--------ChHHH
Confidence 2321 2478899986 899999998753311 1223469999875442 2211 23788
Q ss_pred HHHhCCCeEEEEeecc-CCChhhHHHHHHHhhhhCCCceEEe
Q 023686 228 VRKIQPKRTLFIGMMH-LMDHEKVNEELLKLMETEGLDVQLS 268 (278)
Q Consensus 228 ~~~l~~~~~v~~h~~~-~~~~~~~~~~~~~~~~~~g~~v~~~ 268 (278)
+++++|+.++++.... .+.++ ..+..+++++.+++++.+
T Consensus 241 l~~v~P~~aiiS~g~~n~~~hP--~~evl~~l~~~g~~v~~T 280 (547)
T 2bib_A 241 IKNLSPSLIVQTSDSLPWKNGV--DSEYVNWLKERGIERINA 280 (547)
T ss_dssp HHHHCCSEEEESBSSCSBSSSB--CHHHHHHHHTTTCEEEEC
T ss_pred HHhcCCcEEEEcCCcccccCCC--CHHHHHHHHhCCceEEEe
Confidence 9999999999876543 22332 344556777777777665
No 28
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=99.75 E-value=6.3e-17 Score=132.44 Aligned_cols=169 Identities=16% Similarity=0.116 Sum_probs=114.3
Q ss_pred cccceeEEEEccCCCCCceEEEecCcc--hHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEe
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 113 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~--~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~ 113 (278)
....+|++|+ ++++.+|||||.+ ....+.+.++.....+|++|++||.|.||++|+..+.+. +++||+
T Consensus 28 ~~~~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~------~~~v~~ 97 (219)
T 3l6n_A 28 EYSANSMYLV----TKKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNNK------GIKTYA 97 (219)
T ss_dssp EEEEEEEEEE----ETTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHHT------TCEEEE
T ss_pred cccceEEEEE----eCCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHhC------CCEEEE
Confidence 3456788888 4679999999975 334555555442236899999999999999999999752 578999
Q ss_pred ccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEE--ecCCCCceeeEEEEc--cEEEecCCC
Q 023686 114 AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLP--VWHGAGYRSLGFRFG--NICYISDVS 188 (278)
Q Consensus 114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~--~~H~~~~~~~g~~i~--~v~~~gD~~ 188 (278)
++...+.+++... . .....+ +++.+.+++.++++++ ..|++ .+++|.+. +++|+||+.
T Consensus 98 ~~~~~~~~~~~~~--------------~-~~~~~~~~g~~~~~g~~~i~~~~~~pgHt~--g~~~~~~~~~~~lf~GD~~ 160 (219)
T 3l6n_A 98 TAKTNEFLKKDGK--------------A-TSTEIIKTGKPYRIGGEEFVVDFLGEGHTA--DNVVVWFPKYNVLDGGCLV 160 (219)
T ss_dssp CHHHHHHHHHTTC--------------C-CCSEECCTTSEEEETTEEEEEECCCCSSSS--SCCEEEETTTTEEEEETTS
T ss_pred cHHHHHHHHhcCC--------------C-CCcEecCCCCEEEECCEEEEEEeCCCCCCC--CCEEEEECCCCEEEECCee
Confidence 9998888765321 0 011233 6778999999999886 46887 66777775 899999976
Q ss_pred CCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh--CCCeEEEEeeccCC
Q 023686 189 EIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--QPKRTLFIGMMHLM 245 (278)
Q Consensus 189 ~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l--~~~~~v~~h~~~~~ 245 (278)
.... . .++.. ........+.+.++.+.++ ..+.+++.|.....
T Consensus 161 ~~~~-~------~~~~~-------~~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 205 (219)
T 3l6n_A 161 KSNS-A------TDLGY-------IKEANVEQWPKTINKLKAKYSKATLIIPGHDEWKG 205 (219)
T ss_dssp CCTT-C------SSCCC-------CTTCCTTTHHHHHHHHHHHCTTCSEEEESBSCCTT
T ss_pred eccc-c------ccccc-------cCccCHHHHHHHHHHHHHhCCCCCEEECCCCCCCC
Confidence 4211 0 11100 0112234566677777765 45777777876543
No 29
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=99.74 E-value=4.4e-17 Score=134.73 Aligned_cols=168 Identities=14% Similarity=0.158 Sum_probs=115.3
Q ss_pred cceeEEEEccCCCCCceEEEecCcc--hHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~--~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
.++|++|+ ++++.+|||+|.+ ....+.+.+++.+..+|++|++||.|.||++|+..+.+ ++++||+++
T Consensus 36 ~~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~------~~~~v~~~~ 105 (232)
T 1a7t_A 36 PSNGMIVI----NNHQAALLDTPINDAQTEMLVNWVTDSLHAKVTTFIPNHWHGDCIGGLGYLQR------KGVQSYANQ 105 (232)
T ss_dssp EEEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHHHHCCEEEEEECSSSSHHHHTTHHHHHH------TTCEEEEEH
T ss_pred cceEEEEE----eCCEEEEEeCCCCHHHHHHHHHHHHHhcCCCeEEEEeCCCCccccCCHHHHHh------CCCeEEEcH
Confidence 37889998 4678999999985 33445555555534689999999999999999999876 257899999
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEE--ecCCCCceeeEEEEc--cEEEecCCCCCC
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLP--VWHGAGYRSLGFRFG--NICYISDVSEIP 191 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~--~~H~~~~~~~g~~i~--~v~~~gD~~~~~ 191 (278)
...+.+++... .. ......+++.+.+++.+++++. ..|++ .+++|.+. +++|+||+....
T Consensus 106 ~~~~~~~~~~~------------~~--~~~~~~~g~~~~~g~~~i~~~~~~pgHt~--g~~~~~~~~~~~lf~GD~~~~~ 169 (232)
T 1a7t_A 106 MTIDLAKEKGL------------PV--PEHGFTDSLTVSLDGMPLQCYYLGGGHAT--DNIVVWLPTENILFGGCMLKDN 169 (232)
T ss_dssp HHHHHHHHHTC------------CC--CSEEESSEEEEEETTEEEEEECCCCSSST--TCCEEEETTTTEEEEETTSCCT
T ss_pred HHHHHHHhcCC------------CC--CceecCCCCEEEECCeEEEEEeCCCCCCC--CCEEEEECCCCEEEEcCccccc
Confidence 88877765310 00 0112235678899999999884 45877 67888885 999999986521
Q ss_pred cchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh--CCCeEEEEeeccCC
Q 023686 192 EETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--QPKRTLFIGMMHLM 245 (278)
Q Consensus 192 ~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l--~~~~~v~~h~~~~~ 245 (278)
. .. ..... .......+.+.++.++++ .++.+++.|.....
T Consensus 170 ~--~~---~~~~~---------~~~~~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~ 211 (232)
T 1a7t_A 170 Q--TT---SIGNI---------SDADVTAWPKTLDKVKAKFPSARYVVPGHGNYGG 211 (232)
T ss_dssp T--CC---SCCCC---------TTCCTTTHHHHHHHHHHHCTTCSEEEESSSCCBC
T ss_pred C--Cc---ccccC---------CCCCHHHHHHHHHHHHhhCCCCCEEECCCCCccc
Confidence 1 00 00000 111234567778888877 67788888876553
No 30
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.74 E-value=3.8e-17 Score=137.62 Aligned_cols=183 Identities=16% Similarity=0.079 Sum_probs=115.5
Q ss_pred ccceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCcCCC--CCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEe
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 113 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~~~~--~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~ 113 (278)
...+|++|+ ++++.+|||+|.+ ....+.+.+++.++ .+|++|++||.|+||++|+..+.+.. +++||+
T Consensus 23 ~~~n~~li~----~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~-----~~~v~~ 93 (263)
T 1k07_A 23 DDLASYLIV----TPRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQT-----KAKYMV 93 (263)
T ss_dssp SSBCCEEEE----ETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHH-----CCEEEE
T ss_pred CCeEEEEEE----eCCceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhc-----CCEEEE
Confidence 467789998 4578999999985 34556666666665 47999999999999999999998753 578999
Q ss_pred ccccHHHHHhccccccccccccC-CCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEEc--------cEEE
Q 023686 114 AMRDFEVMKKTHYYLVDTSGIIP-GAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--------NICY 183 (278)
Q Consensus 114 ~~~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~--------~v~~ 183 (278)
++...+.+............... ............+++.+++++.++++++++ |++ .+++|.+. +++|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~i~~i~~pGHt~--g~~~~~~~~~~~~~~~~~lf 171 (263)
T 1k07_A 94 MDEDVSVILSGGKSDFHYANDSSTYFTQSTVDKVLHDGERVELGGTVLTAHLTPGHTR--GCTTWTMKLKDHGKQYQAVI 171 (263)
T ss_dssp EHHHHHHHHTTTTTCTTTTTCGGGCCCCCCCSEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEEEEETTEEEEEEE
T ss_pred cHHHHHHHhcccccccccCccccccCCCCCcceEeCCCCEEEECCeEEEEEECCCCCC--CcEEEEEecccCCceeEEEE
Confidence 99888887653211100000000 000001112233678899999988888876 887 56666654 4999
Q ss_pred ecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeecc
Q 023686 184 ISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMH 243 (278)
Q Consensus 184 ~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~ 243 (278)
+||+...++.. +.+ ...+. ..-..+.+.++.++++.++.+++.|...
T Consensus 172 ~GD~~~~~~~~---~~~------~~~~~----~~~~~~~~sl~~l~~l~~~~i~pgHg~~ 218 (263)
T 1k07_A 172 IGSIGVNPGYK---LVD------NITYP----KIAEDYKHSIKVLESMRCDIFLGSHAGM 218 (263)
T ss_dssp ECCCCCCTTCC---CSS------CSSCT----THHHHHHHHHHHHHTBCCSEEEESBHHH
T ss_pred ECCcccCCCcc---ccC------CCcCc----ccHHHHHHHHHHHHccCCCEEEcCCCcc
Confidence 99986522110 000 00000 0011134556677778888888778654
No 31
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=99.73 E-value=1.3e-17 Score=140.52 Aligned_cols=191 Identities=13% Similarity=0.112 Sum_probs=119.9
Q ss_pred cceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCc-CCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~-~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
..+|++|+ + ++.+|||||.. ....+.+.+++ .+..+|++|++||.|.||++|+..+.+.+ ++++||+++
T Consensus 42 ~~N~yli~----~-~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~IilTH~H~DH~gg~~~l~~~~----~~~~v~~~~ 112 (262)
T 3hnn_A 42 TSNSYVIE----G-DKTAIIDPPVESFMKIYLEALQQTVNLKKLDYVILGHFSPNRIPTFKALLELA----PQITFVCSL 112 (262)
T ss_dssp EEEEEEEE----S-SSEEEECCCCHHHHHHHHHHHHHHSCGGGEEEEECSSCCGGGHHHHHHHHHHC----TTCEEEECH
T ss_pred EEEEEEEE----C-CCEEEEECCCcchHHHHHHHHHHhCChhhCCEEEECCCCcchhchHHHHHHHC----CCCEEEECH
Confidence 44688998 4 68999999985 23444444443 34578999999999999999999998865 578999999
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeec-cCCceeec-ceEEEEEEec--CCCCceeeEEEEc--cEEEecCCCC
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQ-DLKITPLPVW--HGAGYRSLGFRFG--NICYISDVSE 189 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g-~~~i~~~~~~--H~~~~~~~g~~i~--~v~~~gD~~~ 189 (278)
...+.+...+.. .......+ +++.++++ +.++++++++ |++ .++.+... +++|+||+-.
T Consensus 113 ~~~~~l~~~~~~-------------~~~~~~~~~~g~~l~lg~~~~~~~i~tpg~Ht~--g~~~~~~~~~~~lfsGD~~~ 177 (262)
T 3hnn_A 113 PAAGDLRAAFPD-------------DNLNILPMRGKETLDLGKGHVLKFLPIPSPRWP--AGLCTYDVQTQILYTDKIFG 177 (262)
T ss_dssp HHHHHHHHHSSS-------------SCCEEEECCSSCEEECSTTCEEEEEECCCSSCT--TCEEEEETTTTEEEEETTTC
T ss_pred HHHHHHHHHhCC-------------CCCceEEeCCCCEEEcCCCcEEEEEECCCCCCC--CeeEEEeCCCCEEEEeecCc
Confidence 988877664311 01123444 67889998 7777777665 676 55666664 8999999821
Q ss_pred CCcchhhcccCCCEEEEcCcCCC----------CCCCCCCCHHHHHHHHHHhCCCeEEEEeeccCCCh-hhHHHHHHHhh
Q 023686 190 IPEETYPFLQDCEILIMDALRPD----------RSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDH-EKVNEELLKLM 258 (278)
Q Consensus 190 ~~~~~~~~~~~~dili~e~~~~~----------~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~-~~~~~~~~~~~ 258 (278)
.. .. .+.++-+..... ........+.++++.++++.++.+++.|+...... .+..+...+++
T Consensus 178 -~~-~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~l~~L~~~~i~PgHG~~~~~~~~~~~~~y~~w~ 250 (262)
T 3hnn_A 178 -AH-IC-----GDDVFDDNWESFKEDQRYYFNCLMAPHAIHVEAALEKISDLQVRLYAVGHGPLVRTSLIALTQAYADWS 250 (262)
T ss_dssp -CC-CC-----CSCCEESCGGGTHHHHHHHHHHHTGGGHHHHHHHHHHHTTSCCSEEEESSSSEESTTHHHHHHHHHHHH
T ss_pred -cc-cC-----chhcccccHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhCCCCCEEECCCCccccCCHHHHHHHHHHHh
Confidence 10 00 011111110000 00011123456677778888999999997766532 23334444444
Q ss_pred h
Q 023686 259 E 259 (278)
Q Consensus 259 ~ 259 (278)
+
T Consensus 251 ~ 251 (262)
T 3hnn_A 251 K 251 (262)
T ss_dssp H
T ss_pred c
Confidence 3
No 32
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=99.72 E-value=6.2e-17 Score=144.54 Aligned_cols=129 Identities=19% Similarity=0.198 Sum_probs=97.6
Q ss_pred cceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCcC----CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEE
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAY----GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIY 112 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~~----~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~ 112 (278)
..+|++|+ +++..+|||+|.. ....+.+.+++. +..+|++|++||.|.||++|+..+.+.+ ++++||
T Consensus 34 ~~n~~li~----~~~~~iLiD~g~~~~~~~~~~~l~~~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~----p~~~v~ 105 (404)
T 2ohh_A 34 TYNAYLVC----GDEGVALIDNSYPGTFDELMARVEDALQQVGMERVDYIIQNHVEKDHSGVLVELHRRF----PEAPIY 105 (404)
T ss_dssp EECCEEEE----CSSCEEEECCCCTTCHHHHHHHHHHHHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHS----TTCCEE
T ss_pred eEEEEEEE----eCCcEEEEeCCCCccHHHHHHHHHHHhccCCccCCCEEEeCCCCCcccchHHHHHHHC----CCCEEE
Confidence 34688898 4567999999986 244455555554 5679999999999999999999998765 568999
Q ss_pred eccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEec--CCCCceeeEEEEc--cEEEecCC
Q 023686 113 VAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDV 187 (278)
Q Consensus 113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~--H~~~~~~~g~~i~--~v~~~gD~ 187 (278)
+++...+.+++.+... .......+ +++.+++++.++++++++ |++ .+++|.+. +++|+||+
T Consensus 106 ~~~~~~~~~~~~~~~~------------~~~~~~~~~~g~~~~~g~~~i~~~~~p~gH~~--~~~~~~~~~~~~lf~GD~ 171 (404)
T 2ohh_A 106 CTEVAVKGLLKHYPSL------------REAEFMTVKTGDVLDLGGKTLTFLETPLLHWP--DSMFTLLDEDGILFSNDA 171 (404)
T ss_dssp ECHHHHHHHHHHCGGG------------GGSCEEECCTTCEEECSSCEEEEEECTTSSST--TCEEEEEETTTEEECTTT
T ss_pred ECHHHHHHHHHHhccc------------ccCCceEcCCCCEEEECCEEEEEEeCCCCCCC--CceEEEECCCcEEEecCc
Confidence 9998888776642110 01123334 678899999999999987 887 56777774 99999997
Q ss_pred C
Q 023686 188 S 188 (278)
Q Consensus 188 ~ 188 (278)
.
T Consensus 172 ~ 172 (404)
T 2ohh_A 172 F 172 (404)
T ss_dssp T
T ss_pred c
Confidence 5
No 33
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=99.72 E-value=1.4e-16 Score=136.57 Aligned_cols=188 Identities=17% Similarity=0.160 Sum_probs=117.7
Q ss_pred ccceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCcCCC--CCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEe
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 113 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~~~~--~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~ 113 (278)
.+.+|++|+ .++..+|||+|.. ....+.+.+++.++ .+|++|++||.|.||++|+..+.+.+ +.+||+
T Consensus 56 ~~~~~~li~----~~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-----~~~v~~ 126 (303)
T 4ax1_B 56 CGISALLVT----SDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT-----GAPVYA 126 (303)
T ss_dssp SSSCCEEEC----CTTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH-----CCCEEE
T ss_pred CCceEEEEE----eCCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc-----CCEEEE
Confidence 467899998 5678999999974 44556666666665 35999999999999999999998764 578999
Q ss_pred ccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEec-CCCCceeeEEEEc-------cEEEe
Q 023686 114 AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG-------NICYI 184 (278)
Q Consensus 114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~-------~v~~~ 184 (278)
++...+.+.+........................+ +++.+++|+.+|++++++ |++ .+++|.+. ..+++
T Consensus 127 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~v~~~~~pgHt~--g~~~~~~~~~~~~~~~~~l~ 204 (303)
T 4ax1_B 127 RAPAIDTLKRGLPDRTDPNFEVAEPVAPVANIVTLADDGVVSVGPLALTAVASPGHTP--GGTSWTWRSCEGDDCRQMVY 204 (303)
T ss_dssp EHHHHHHHHHTSCCTTSTTGGGCCCCCCCSCEEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEEEEETTEEEEEEE
T ss_pred cHHHHHHHhccccCccccccccccCcCCCCCcEEeCCCCEEEECCeEEEEEeCCCCCc--cceEEEEEecCCCceeEEEE
Confidence 99988888764311000000000000011123334 678899999999888766 777 56777664 14566
Q ss_pred cCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeeccCC
Q 023686 185 SDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLM 245 (278)
Q Consensus 185 gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~ 245 (278)
||+-.... .- ..++. .+..+. ..-..+.++++.++.++++.+++.|+....
T Consensus 205 gD~l~~~~-~~----~~~~~-~~~~~~----~~~~~~~~sl~~l~~l~~~~vv~~Hg~~~~ 255 (303)
T 4ax1_B 205 ADSLTAIS-DD----VFRYS-DDAAHP----GYLAAFRNTLARVAALDCDILVTPHPSASG 255 (303)
T ss_dssp CCCCCCCC-CS----SCCTT-CGGGST----THHHHHHHHHHHHHTSCCSEEECSSGGGGT
T ss_pred eCCccccC-cC----cccCC-CCCCCc----cHHHHHHHHHHHHhcCCCCEEEcCCcchhh
Confidence 88754211 00 00000 000000 000223456778888899999999977644
No 34
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=99.72 E-value=9e-17 Score=137.21 Aligned_cols=178 Identities=19% Similarity=0.232 Sum_probs=119.4
Q ss_pred cccCCCCCcccceeEEEEccCCCCCceEEEecCcch----HHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhc
Q 023686 28 AVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFF----YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTN 103 (278)
Q Consensus 28 ~~~~~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~----~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~ 103 (278)
+..|++...++.+|++|. +++..+|||||... ...+.+.++..+. +|++||+||.|.||++|+..+.+.+.
T Consensus 21 g~~p~p~~~~~~n~~li~----~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~-~i~~Ii~TH~H~DH~gg~~~l~~~~~ 95 (289)
T 4ad9_A 21 GCNPGPMTLQGTNTYLVG----TGPRRILIDTGEPAIPEYISCLKQALTEFNT-AIQEIVVTHWHRDHSGGIGDICKSIN 95 (289)
T ss_dssp CSCCBTTTBTCCEEEEEC----SSSSEEEECCCSTTCHHHHHHHHHHHHHTTC-CEEEEECSCSSHHHHTTHHHHHHHSC
T ss_pred CCCCCCCcCCceEEEEEe----cCCceEEEeCCCCCChHHHHHHHHHHHHcCC-CceEEEEcCCCCcccccHHHHHHhhc
Confidence 344667778899999998 56789999999742 2345555555564 89999999999999999999988752
Q ss_pred cCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEec-CCCCceeeEEEEc--
Q 023686 104 NVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG-- 179 (278)
Q Consensus 104 ~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~-- 179 (278)
. .+..++|.++.... ..... ......+..+ +++.+++++.++++++++ |++ .+++|.+.
T Consensus 96 ~-~~~~~v~~~~~~~~-----~~~~~---------~~~~~~~~~~~~g~~~~~gg~~~~~~~~pGHt~--~~~~~~~~~~ 158 (289)
T 4ad9_A 96 N-DTTYCIKKLPRNPQ-----REEII---------GNGEQQYVYLKDGDVIKTEGATLRVLYTPGHTD--DHMALLLEEE 158 (289)
T ss_dssp C-SSCCCEEECCCSSC-----CCCCB---------TTTTBCEEECCTTCEEEETTEEEEEEECCSSST--TCEEEEETTT
T ss_pred c-CCCceEEecCCCcc-----hhhhc---------cCCCCceEEcCCCCEEEeCCeEEEEEECCCCCC--CCEEEEEcCC
Confidence 1 23567888764310 00000 0011233444 678999999999888874 666 67888886
Q ss_pred cEEEecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeeccCCC
Q 023686 180 NICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMD 246 (278)
Q Consensus 180 ~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~ 246 (278)
+++|+||+..... . .. +. .-..+.+.++.++++.++.+++.|......
T Consensus 159 ~~lftGD~~~~~~-~-~~------------~~-----~~~~~~~sl~~l~~l~~~~v~pgHg~~~~~ 206 (289)
T 4ad9_A 159 NAIFSGDCILGEG-T-TV------------FE-----DLYDYMNSLKELLKIKADIIYPGHGPVIHN 206 (289)
T ss_dssp TEEEEETSSCSSS-C-CC------------CS-----CHHHHHHHHHHHHHHTCSEEEESSSSCBSC
T ss_pred CEEEEecccCCCC-C-cC------------cC-----CHHHHHHHHHHHHcCCCCEEEeCCCChhcC
Confidence 8999999743211 0 00 00 011234567778888899888888776655
No 35
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=99.72 E-value=9.4e-17 Score=143.08 Aligned_cols=127 Identities=13% Similarity=0.185 Sum_probs=95.7
Q ss_pred cceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCc-CCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~-~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
..+|++|+ + ++.+|||+|.. ....+.+.+++ .+..+||+||+||.|.||++|+..+.+.+ ++.+||+++
T Consensus 35 ~~n~~li~----~-~~~iliD~g~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~----~~~~v~~~~ 105 (398)
T 1ycg_A 35 TYNAYLIV----D-DKTALVDTVYEPFKEELIAKLKQIKDPVKLDYLVVNHTESDHAGAFPAIMELC----PDAHVLCTQ 105 (398)
T ss_dssp EECCEEEC----S-SSCEEECCCCGGGHHHHHHHHHHHCSSCCCSEEEESCCSHHHHTTHHHHHHHC----TTCEEEECH
T ss_pred eEEEEEEE----C-CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhhhHHHHHHHC----CCCEEEEcH
Confidence 46788888 2 46999999986 23445544444 35679999999999999999999998865 468999999
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEec--CCCCceeeEEEEc--cEEEecCCC
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 188 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~--H~~~~~~~g~~i~--~v~~~gD~~ 188 (278)
...+.+++.+.. .......+ +++.+++++.++++++++ |++ .++++... +++|+||+.
T Consensus 106 ~~~~~l~~~~~~-------------~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~--~~~~~~~~~~~~lf~GD~~ 168 (398)
T 1ycg_A 106 RAFDSLKAHYSH-------------IDFNYTIVKTGTSVSLGKRSLTFIEAPMLHWP--DSMFTYVPEEALLLPNDAF 168 (398)
T ss_dssp HHHHHHHHHTCS-------------CCCEEEECCTTCEEECSSCEEEEEECTTSSST--TCEEEEETTTTEEEEETTT
T ss_pred HHHHHHHHHhCC-------------CCcceEEeCCCCEEeeCCcEEEEEeCCCCCCC--CcEEEEECCCcEEEecccc
Confidence 988877664210 01123344 678899999999999887 777 56777775 999999984
No 36
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.72 E-value=7e-17 Score=140.25 Aligned_cols=170 Identities=16% Similarity=0.109 Sum_probs=112.8
Q ss_pred CCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeeccCCceeec
Q 023686 77 RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQ 156 (278)
Q Consensus 77 ~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 156 (278)
.+|++|||||+|.||++|++.+. +.+||+++.+.+.++.......... . .+..-+...++++.+.++
T Consensus 23 ~~i~ai~lTH~H~DHiggl~~l~--------~~pVy~s~~t~~ll~~~l~~~~~~~--~---~~~~~~~~~i~~~~~~~g 89 (336)
T 3zdk_A 23 GTARLFFLSHMHSDHTVGLSSTW--------ARPLYCSPITAHLLHRHLQVSKQWI--Q---ALEVGESHVLPLDEIGQE 89 (336)
T ss_dssp CSSCEEECCCCCGGGSTTCSTTC--------CSCEEECHHHHHHHHHHHCCCTTTE--E---ECCTTSEEEEESSSSSSC
T ss_pred CCCCEEEECCChHHHHCchHHHc--------CCCEEecHHHHHHHHHhhhhcccce--E---ecCCCCeEEecCcccccC
Confidence 58999999999999999999963 4689999999988876532211000 0 000001122244555668
Q ss_pred ceEEEEEEecCCCCceeeEEEEc----cEEEecCCCCCCcchhh----cccCCCEEEEcCcCCCCCCCCCCCHHHHHHHH
Q 023686 157 DLKITPLPVWHGAGYRSLGFRFG----NICYISDVSEIPEETYP----FLQDCEILIMDALRPDRSSSTHFGLPRALEEV 228 (278)
Q Consensus 157 ~~~i~~~~~~H~~~~~~~g~~i~----~v~~~gD~~~~~~~~~~----~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~ 228 (278)
+++|+++++.|.+ ++++|+++ +++|+||+...++.... ..+++|++++|+++..... .+.+-.++.+.+
T Consensus 90 ~~~v~~~~~~H~~--gs~~~~i~~~~~~i~~tGD~~~~~~~~~~~~l~~~~~vD~Li~DsT~~~~~~-~~pse~~v~~~l 166 (336)
T 3zdk_A 90 TMTVTLLDANHCP--GSVMFLFEGYFGTILYTGDFRYTPSMLKEPALTLGKQIHTLYLDNTNCNPAL-VLPSRQEAAHQI 166 (336)
T ss_dssp EEEEEEEECSSST--TCEEEEEEETTEEEEECCSCCCCGGGGGCGGGSSCCCCSEEEECCTBCCTTC-CCCCHHHHHHHH
T ss_pred CEEEEEEECCCCc--ceEEEEEEeCCceEEEeCCCCCCcccccchhhhccCCccEEEEecCCCCCCC-CCCCHHHHHHHH
Confidence 9999999999976 78899885 89999999765432221 2568999999999987543 345555544444
Q ss_pred H----HhCCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEE
Q 023686 229 R----KIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQL 267 (278)
Q Consensus 229 ~----~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~ 267 (278)
. +....++++.++ +... ..++.+.++++|.+|.+
T Consensus 167 ~~~i~~~~~g~vii~~f-~vgR----~q~i~~~a~~~grkV~v 204 (336)
T 3zdk_A 167 VQLIRKHPQHNIKIGLY-SLGK----ESLLEQLALEFQTWVVL 204 (336)
T ss_dssp HHHHHTCTTSEEEEEEC-SSSC----HHHHHHHHHHHTCCEEC
T ss_pred HHHHHhCCCCcEEEeec-chHH----HHHHHHHHHHcCCEEEE
Confidence 3 333347777765 4444 34556667777766654
No 37
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=99.72 E-value=5e-17 Score=145.03 Aligned_cols=127 Identities=17% Similarity=0.237 Sum_probs=96.4
Q ss_pred cceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCcC-CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~~-~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
+.+|++|+ + ++.+|||||.. ....+.+.+++. +..+|++||+||.|.||++|+..+.+.+ ++.+||+++
T Consensus 34 ~~n~~li~----~-~~~iliD~G~~~~~~~~~~~l~~~~~~~~i~~iiiTH~H~DH~gg~~~l~~~~----~~~~v~~~~ 104 (402)
T 1e5d_A 34 TYNAYLVE----D-EKTTLFDTVKAEYKGELLCGIASVIDPKKIDYLVIQHLELDHAGALPALIEAC----QPEKIFTSS 104 (402)
T ss_dssp EEEEEEEC----S-SSCEEECCCCGGGHHHHHHHHHTTSCGGGCCEEEECCCSHHHHTTHHHHHHHH----CCSEEEEEH
T ss_pred ceEEEEEE----C-CCEEEEeCCCCccHHHHHHHHHHhCCcccCCEEEeCCCCccccccHHHHHHHC----CCCEEEECh
Confidence 56788888 2 47999999986 345555555444 4578999999999999999999998865 468999999
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEec--CCCCceeeEEEEc--cEEEecCCC
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 188 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~--H~~~~~~~g~~i~--~v~~~gD~~ 188 (278)
...+.+++.+.. .......+ +++.+++++.++++++++ |++ .++++... +++|+||+.
T Consensus 105 ~~~~~~~~~~~~-------------~~~~~~~~~~g~~~~~g~~~~~~~~~p~gH~~--~~~~~~~~~~~~l~~GD~~ 167 (402)
T 1e5d_A 105 LGQKAMESHFHY-------------KDWPVQVVKHGETLSLGKRTVTFYETRMLHWP--DSMVSWFADEKVLISNDIF 167 (402)
T ss_dssp HHHHHHHHHHCC-------------SSCCEEEECTTCEEECSSCEEEEEECTTSSST--TCEEEEETTTTEEEEETTT
T ss_pred HHHHHHHHHhCC-------------CCCceEEcCCCCEEEECCCEEEEEeCCCCCCC--CcEEEEECCCCEEEecccc
Confidence 988877663210 01123334 678899999999999987 987 56777775 999999984
No 38
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=99.71 E-value=2.5e-17 Score=146.75 Aligned_cols=125 Identities=17% Similarity=0.187 Sum_probs=95.6
Q ss_pred eeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCcC-CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecccc
Q 023686 40 TSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRD 117 (278)
Q Consensus 40 ~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~~-~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~ 117 (278)
+||||. ++++++|||+|.. ....+.+.|++. +..+||+|++||.|+||+++++.+.+.+. ++++|++++..
T Consensus 53 NsYLI~----~~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~---~~~~v~~s~~~ 125 (410)
T 4dik_A 53 NAYLVK----LNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTIG---HDVEIIASNFG 125 (410)
T ss_dssp EEEEEE----CSSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHHC---SCCEEEECHHH
T ss_pred EEEEEE----ECCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHcC---CCCEEEeCHHH
Confidence 589998 5678999999964 455566555553 56789999999999999999999988763 57899999988
Q ss_pred HHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEec--CCCCceeeEEEEccEEEecCCC
Q 023686 118 FEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW--HGAGYRSLGFRFGNICYISDVS 188 (278)
Q Consensus 118 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~--H~~~~~~~g~~i~~v~~~gD~~ 188 (278)
...++..+.. ..+..+ +++.+++|+.++++++++ |++ .++.+..++++|+||..
T Consensus 126 ~~~l~~~~~~---------------~~~~~v~dGd~l~lG~~~L~~i~tPg~H~p--~~~~~y~~~iLFsgD~f 182 (410)
T 4dik_A 126 KRLLEGFYGI---------------KDVTVVKDGEEREIGGKKFKFVMTPWLHWP--DTMVTYLDGILFSCDVG 182 (410)
T ss_dssp HHHHHHHHCC---------------CCEEECCTTCEEEETTEEEEEEECTTSSST--TCEEEEETTEEEEETTT
T ss_pred HHHHHhhcCc---------------cceeEecCCCEEeecceEEEEecCCCCCCC--CCeeEEeCCceEccccc
Confidence 8877664311 123344 788999999988888775 676 45555568999999973
No 39
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=99.71 E-value=1.4e-16 Score=130.83 Aligned_cols=167 Identities=13% Similarity=0.087 Sum_probs=112.0
Q ss_pred ccceeEEEEccCCCCCceEEEecCcc--hHHHHhhhCCcC-CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEe
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 113 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~--~~~~~~~~l~~~-~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~ 113 (278)
.+.+|++|+ ++++.+|||+|.+ ....+.+.+++. + .+|++|++||.|.||++|+..+.+ ++++||+
T Consensus 25 ~~~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~g-~~i~~vi~TH~H~DH~gg~~~~~~------~~~~v~~ 93 (223)
T 1m2x_A 25 YAANAVYLV----TDKGVVVIDCPWGEDKFKSFTDEIYKKHG-KKVIMNIATHSHDDRAGGLEYFGK------IGAKTYS 93 (223)
T ss_dssp EEEEEEEEE----ETTEEEEESCCSSGGGHHHHHHHHHHHHC-CCEEEEECSSSSTTTTTTHHHHHH------TTCEEEE
T ss_pred ccccEEEEE----eCCEEEEEeCCCChhHHHHHHHHHHHHhC-CCeEEEEeccCCccccCchhhHhh------CCCeEEE
Confidence 457788998 4678999999974 344555555554 5 589999999999999999999876 2578999
Q ss_pred ccccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEE--ecCCCCceeeEEEEc--cEEEecCCCC
Q 023686 114 AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLP--VWHGAGYRSLGFRFG--NICYISDVSE 189 (278)
Q Consensus 114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~--~~H~~~~~~~g~~i~--~v~~~gD~~~ 189 (278)
++...+.++..... . ......+++.+++++.+++++. ..|++ .+++|.+. +++|+||...
T Consensus 94 ~~~~~~~~~~~~~~------------~--~~~~~~~g~~~~~g~~~i~~~~~~pgHt~--~~~~~~~~~~~~lf~GD~~~ 157 (223)
T 1m2x_A 94 TKMTDSILAKENKP------------R--AQYTFDNNKSFKVGKSEFQVYYPGKGHTA--DNVVVWFPKEKVLVGGCIIK 157 (223)
T ss_dssp EHHHHHHHHHTTCC------------C--CSEEESSCEEEEETTEEEEEECCCSSSSS--SCCEEEETTTTEEEEETTSC
T ss_pred cHHHHHHHHhcCcc------------C--CceecCCCceEEECCEEEEEEecCCCCCC--CCEEEEECCCCEEEEecccc
Confidence 99888877653210 0 0112235678899999999883 45877 67888885 8999999643
Q ss_pred CCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh--CCCeEEEEeeccC
Q 023686 190 IPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--QPKRTLFIGMMHL 244 (278)
Q Consensus 190 ~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l--~~~~~v~~h~~~~ 244 (278)
... . .++. + ........+.+.++.++++ ..+.+++.|....
T Consensus 158 ~~~-~------~~~~-----~--~~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~ 200 (223)
T 1m2x_A 158 SAD-S------KDLG-----Y--IGEAYVNDWTQSVHNIQQKFSGAQYVVAGHDDWK 200 (223)
T ss_dssp CTT-C------SSCC-----C--CTTCCHHHHHHHHHHHHHHTTTCSEEEESBSCCC
T ss_pred cCc-c------cccc-----c--CCCCCHHHHHHHHHHHHHhCCCCCEEEeCCCCcC
Confidence 211 0 1110 0 0111112234456666665 5677888887766
No 40
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=99.71 E-value=6.5e-17 Score=138.80 Aligned_cols=143 Identities=15% Similarity=0.127 Sum_probs=99.9
Q ss_pred cccceeEEEEccCCCCCceEEEecCcc-----------hHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhcc
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKF-----------FYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNN 104 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~-----------~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~ 104 (278)
..+++||+|..+ .+++++|||+|.. ....+.+.+++.+. +|++||+||.|.||++|+..+.+.+
T Consensus 14 ~~~~~~yli~~~--~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~-- 88 (298)
T 4efz_A 14 ATCTISYLLFDS--GSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGA-RVRWLLETHVHADHLSAAPYLKTRV-- 88 (298)
T ss_dssp TTCBEEEEEECT--TTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTC-EEEEEECSSCCSSSBCCHHHHHHHH--
T ss_pred CcccEEEEEEEC--CCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCC-cceEEEECCCchhhhhhHHHHHHHh--
Confidence 457889999732 2568999999973 34566666777776 6999999999999999999998875
Q ss_pred CCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEEc--c-
Q 023686 105 VQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--N- 180 (278)
Q Consensus 105 ~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~--~- 180 (278)
+.+||+++...+.++.... .+........ ..........+++.+.+|+.+++++.++ |++ .+++|.+. .
T Consensus 89 ---~a~i~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~g~~l~~g~~~i~vi~tPGHT~--g~~~~~~~~~~~ 161 (298)
T 4efz_A 89 ---GGEIAIGRHVTRVQDVFGK-LFNAGPAFAH-DGSQFDRLLDDGDTLALGALSIRAMHTPGHTP--ACMTYVVTEAHA 161 (298)
T ss_dssp ---CCEEEEETTHHHHHHHHHH-HTTCCTTSCS-SSTTSSEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEEETTC
T ss_pred ---CCcEEEChhHHHHHHHHHH-hcCCcccccc-cccCCCEEeCCCCEEEECCEEEEEEECCCCCc--ccEEEEECCCcc
Confidence 4789999887665543211 1111000000 1111223344788999999999998887 777 67888887 2
Q ss_pred -------EEEecCCCCC
Q 023686 181 -------ICYISDVSEI 190 (278)
Q Consensus 181 -------v~~~gD~~~~ 190 (278)
++|+||+-..
T Consensus 162 ~~~~~~~~lftGD~l~~ 178 (298)
T 4efz_A 162 AHDARDAAAFVGDTLFM 178 (298)
T ss_dssp CGGGCBCEEECCSSBCC
T ss_pred cccCCceEEEEcCcccc
Confidence 9999998643
No 41
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=99.70 E-value=1.5e-16 Score=131.32 Aligned_cols=192 Identities=15% Similarity=0.106 Sum_probs=118.9
Q ss_pred ccceeEEEEccCCCCCceEEEecCcch--HHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEec
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVA 114 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~--~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~ 114 (278)
.+.+|++|. ++++.+|||+|.+. ...+.+.+++....+|++|++||.|+||++|+..+.+ ++++||++
T Consensus 24 ~~~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~------~~~~v~~~ 93 (233)
T 3q6v_A 24 VQENSMVYI----GTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKT------LGAKIVAT 93 (233)
T ss_dssp SCEEEEEEE----CSSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHH------TTCEEEEE
T ss_pred CCCcEEEEE----eCCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhh------CCCEEEEc
Confidence 456688888 56789999999863 4556666655556789999999999999999999874 46899999
Q ss_pred cccHHHHHhccccccccc----cccCCCCccceeeeeccCCceeecceEEEEEEecCCCCceeeEEEEc--cEEEecCCC
Q 023686 115 MRDFEVMKKTHYYLVDTS----GIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVS 188 (278)
Q Consensus 115 ~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~--~v~~~gD~~ 188 (278)
+...+.+.+......... ...+............++..+..+++++...+..|++ .++.+.+. +++| ||+-
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~~~pGHt~--g~~~~~~~~~~~lf-gD~~ 170 (233)
T 3q6v_A 94 QMTYDLQKSQWGSIVNFTRQGNNKYPNLEKSLPDTVFPGDFNLQNGSIRAMYLGEAHTK--DGIFVYFPAERVLY-GNCI 170 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCCCCCCCCCSEEESSCEEETTTTEEEECCCCSSSS--SCCEEEETTTTEEE-CTTT
T ss_pred HHHHHHHHhhhHHHHHHHhccccccccccccCCCEEeCCCeEEcCceEEEEECCCCCCc--CcEEEEeccCCEEE-Ccee
Confidence 988877765322110000 0000000111111112333444456666666456888 56777775 8999 9975
Q ss_pred CCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh------CCCeEEEEeeccCCChhhHHHHHHHhhh
Q 023686 189 EIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI------QPKRTLFIGMMHLMDHEKVNEELLKLME 259 (278)
Q Consensus 189 ~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l------~~~~~v~~h~~~~~~~~~~~~~~~~~~~ 259 (278)
.... ...+ .......+.+.++.++++ +++.+++.|.......+ ..+.+.+.++
T Consensus 171 ~~~~--~~~~---------------~~~~~~~~~~sl~~l~~l~~~~~~~~~~i~pgHg~~~~~~~-~i~~~~~~l~ 229 (233)
T 3q6v_A 171 LKEN--LGNM---------------SFANRTEYPKTLEKLKGLIEQGELKVDSIIAGHDTPIHDVG-LIDHYLTLLE 229 (233)
T ss_dssp SCSS--CCCC---------------TTCCTTHHHHHHHHHHHHHHTTSSCCSEEECSSSSSEECTH-HHHHHHHHHH
T ss_pred cccc--CCCC---------------CcCCHHHHHHHHHHHHHhhhcccCCCeEEECCCCCccCCHH-HHHHHHHHHH
Confidence 4221 0000 112345677788888888 88899998977654443 2344444443
No 42
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.70 E-value=1.8e-16 Score=131.93 Aligned_cols=189 Identities=12% Similarity=0.134 Sum_probs=117.6
Q ss_pred cccceeEEEEccCCCCCceEEEecCcc--hHHHHhhhCCcC-CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEE
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIY 112 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~--~~~~~~~~l~~~-~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~ 112 (278)
..+.+|++|+ ++++.+|||+|.+ ....+.+.+++. +. +|++||+||.|.||++|+..+.+. +++||
T Consensus 45 ~~~~n~~li~----~~~~~iLID~G~~~~~~~~l~~~l~~~~~~-~i~~vi~TH~H~DH~gg~~~l~~~------~~~v~ 113 (243)
T 4hl2_A 45 AVASNGLIVR----DGGRVLVVDTAWTDDQTAQILNWIKQEINL-PVALAVVTHAHQDKMGGMDALHAA------GIATY 113 (243)
T ss_dssp EEEEEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHHHTCC-CEEEEEECSSSHHHHTTHHHHHHT------TCEEE
T ss_pred cccceEEEEE----ECCcEEEEECCCCCccHHHHHHHHHHhhCC-CeeEEEECCCCccccCCHHHHHhC------CCeEE
Confidence 4567899998 4678999999964 345566666665 54 799999999999999999999773 57899
Q ss_pred eccccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEecCCCCceeeEEEEc--cEEEecCCCCC
Q 023686 113 VAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSEI 190 (278)
Q Consensus 113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~--~v~~~gD~~~~ 190 (278)
+++...+.+.+.......... .. .......+++.++++++++......|++ .+++|.+. +++|+||+...
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~-----~~-~~~~~~~~g~~~~~g~~~v~~~~pGHt~--g~~~~~~~~~~~lf~GD~~~~ 185 (243)
T 4hl2_A 114 ANALSNQLAPQEGMVAAQHSL-----TF-AANGWVEPATAPNFGPLKVFYPGPGHTS--DNITVGIDGTDIAFGGCLIKD 185 (243)
T ss_dssp EEHHHHHHGGGTTCCCCSEEE-----CB-CTTSBBCGGGSTTCTTEEEECCCSSSST--TCCEEEETTTTEEECTTTCCC
T ss_pred ECHHHHHHHhccccccccccc-----cc-ccceEecCCCeEEECCEEEEeCCCCCCc--CCEEEEEcCCCEEEEcceeee
Confidence 999888777653321111000 00 0011123567888999998322344887 67888885 89999998652
Q ss_pred CcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHH-h-CCCeEEEEeeccCCChhhHHHHHHHhhh
Q 023686 191 PEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRK-I-QPKRTLFIGMMHLMDHEKVNEELLKLME 259 (278)
Q Consensus 191 ~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~-l-~~~~~v~~h~~~~~~~~~~~~~~~~~~~ 259 (278)
.. . .. ...+ .......+.+.++.+.. + ....+++.|..... .+..+...+.++
T Consensus 186 ~~-~-~~---~~~~---------~~~d~~~~~~sl~~l~~~l~~~~~v~pgHg~~~~--~~~i~~~~~~l~ 240 (243)
T 4hl2_A 186 SK-A-KS---LGNL---------GDADTEHYAASARAFGAAFPKASMIVMSHSAPDS--RAAITHTARMAD 240 (243)
T ss_dssp TT-C-SC---CCCC---------TTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCBC--THHHHHHHHHHH
T ss_pred cc-C-CC---cCCC---------CCCCHHHHHHHHHHHHhhCCCceEEEeCCCCcCc--HHHHHHHHHHHH
Confidence 11 0 00 0000 01122345566666664 4 45667777866544 234455555444
No 43
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.69 E-value=3.5e-17 Score=138.66 Aligned_cols=156 Identities=15% Similarity=0.173 Sum_probs=99.2
Q ss_pred CCccccccccCCCCCcccceeEEEEccCCCCCceEEEecCcchH-----------------------HHHhhhCCcCCC-
Q 023686 21 KCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFY-----------------------HSALRWFPAYGI- 76 (278)
Q Consensus 21 ~~~~c~~~~~~~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~~-----------------------~~~~~~l~~~~~- 76 (278)
.|..|..............+|++|+ .++..+|||+|.+.. ..+.+.|++.++
T Consensus 25 ~~~~~~~~~~~~~~~~~~~~~~li~----~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~ 100 (276)
T 2r2d_A 25 TFVTPQKPTVSSRLIDIPVSAYLIQ----CTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLS 100 (276)
T ss_dssp SCCCSSSTTCCCCEEEEEEEEEEEE----CSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCC
T ss_pred CccccccccCCCceEEeeeEEEEEE----CCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCC
Confidence 4444444332222234467899998 467899999998642 223344445544
Q ss_pred -CCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCC-C-C--ccceeeeecc--
Q 023686 77 -RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPG-A-A--VSELQFNIID-- 149 (278)
Q Consensus 77 -~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~-~-~--~~~~~~~~~~-- 149 (278)
.+|++|++||.|+||++|+..+ ++.+||+++...+.+................ . . .....+..++
T Consensus 101 ~~~i~~VilTH~H~DH~gg~~~~--------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (276)
T 2r2d_A 101 PDDISTVVLSHLHNDHAGCVEYF--------GKSRLIAHEDEFATAVRYFATGDHSSPYIVKDIEAWLATPRNWDLVGRD 172 (276)
T ss_dssp GGGCSEEECSCCSTTTSTTGGGC--------SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHHHHHHHTTSCCCEEEECTT
T ss_pred HHHCCEEEecCcccccCCChhhC--------CCCEEEECHHHHHHHhccccccccccccchHHhhhhccccccceeccCC
Confidence 5899999999999999999986 4678999998877664422110000000000 0 0 0112344454
Q ss_pred CCceeec-ceEEEEE-EecCCCCceeeEEEE-----ccEEEecCCCCCC
Q 023686 150 EEPFTVQ-DLKITPL-PVWHGAGYRSLGFRF-----GNICYISDVSEIP 191 (278)
Q Consensus 150 ~~~~~~g-~~~i~~~-~~~H~~~~~~~g~~i-----~~v~~~gD~~~~~ 191 (278)
++.++++ ++++..+ | .|++ .+++|.+ .+++|+||+....
T Consensus 173 g~~~~l~~~~~v~~~~p-gHt~--g~~~~~~~~~~~~~vl~~GD~~~~~ 218 (276)
T 2r2d_A 173 ERERELAPGVNLLNFGT-GHAS--GMLGLAVRLEKQPGFLLVSDACYTA 218 (276)
T ss_dssp CCEEEEETTEEEEEEES-SSSS--SEEEEEEECSSSCEEEEEETTSCCH
T ss_pred CceeEecCCEEEEeCCC-CCCc--eeEEEEEEcCCCceEEEEechhhhH
Confidence 5778886 7888888 6 7987 6788887 3799999997644
No 44
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=99.68 E-value=4.2e-16 Score=131.68 Aligned_cols=183 Identities=15% Similarity=0.129 Sum_probs=114.3
Q ss_pred ccceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCcCCCC--CcCEEEeecCChhhhCChHHHHhhhccCCCCccEEe
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAYGIR--TIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 113 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~~~~~--~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~ 113 (278)
.+.+|++|+ ++++.+|||+|.+ ....+.+.+++.++. +|++||+||.|.||++|+..+.+.+ +++||+
T Consensus 36 ~~~~~~li~----~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~-----~~~v~~ 106 (269)
T 1sml_A 36 EDLTALLVQ----TPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRT-----GAKVAA 106 (269)
T ss_dssp TTBCCEEEE----ETTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHS-----SCEEEE
T ss_pred CCcEEEEEE----eCCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhc-----CCeEEE
Confidence 456789998 4578999999986 345566666676654 8999999999999999999998754 578999
Q ss_pred ccccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEEc-------cEEEec
Q 023686 114 AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG-------NICYIS 185 (278)
Q Consensus 114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~-------~v~~~g 185 (278)
++...+.+.+........... .............+++.++++++++++++++ |++ .+++|++. ..+++|
T Consensus 107 ~~~~~~~l~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pGHt~--g~~~~~~~~~~~~~~~~l~~g 183 (269)
T 1sml_A 107 NAESAVLLARGGSDDLHFGDG-ITYPPANADRIVMDGEVITVGGIVFTAHFMAGHTP--GSTAWTWTDTRNGKPVRIAYA 183 (269)
T ss_dssp CHHHHHHHHTTTCSBTTTBTS-SCCCCCCCSEECCTTCEEEETTEEEEEEECCSSST--TCEEEEEEEEETTEEEEEEEC
T ss_pred CHHHHHHHhcCCccccccccc-cCCCCCCCCeEeCCCCEEEECCEEEEEEECCCCCc--ccEEEEEecccCCceeEEEEe
Confidence 998888776532110000000 0000000111223677899999999999887 777 66777663 156668
Q ss_pred CCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeeccC
Q 023686 186 DVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHL 244 (278)
Q Consensus 186 D~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~ 244 (278)
|+...+. .... ....+ . ..-..+.+.++.++++.++.+++.|....
T Consensus 184 D~l~~~~--------~~~~-~~~~~---~-~~~~~~~~sl~~l~~l~~~~l~~~H~~~~ 229 (269)
T 1sml_A 184 DSLSAPG--------YQLQ-GNPRY---P-HLIEDYRRSFATVRALPCDVLLTPHPGAS 229 (269)
T ss_dssp CCCCCTT--------CCCS-SCTTC---T-THHHHHHHHHHHHHTSCCSEEECSSGGGG
T ss_pred ccccCCC--------cccc-cCCCC---C-cCHHHHHHHHHHHHcCCCCEEEeCCCCcc
Confidence 9753211 0000 00000 0 00011334566677778888888886653
No 45
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=99.68 E-value=3.5e-16 Score=128.84 Aligned_cols=168 Identities=17% Similarity=0.145 Sum_probs=110.3
Q ss_pred cceeEEEEccCCCCCceEEEecCcch--HHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~~--~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
..+|++|+ .+++.+|||+|... ...+.+.+++....+|++|++||.|+||++|+..+.+. +++||+++
T Consensus 40 ~~n~~li~----~~~~~iliD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~------~~~v~~~~ 109 (227)
T 1mqo_A 40 PSNGLVLN----TSKGLVLVDSSWDDKLTKELIEMVEKKFQKRVTDVIITHAHADRIGGIKTLKER------GIKAHSTA 109 (227)
T ss_dssp EEEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHHHHTSCEEEEECCCCSHHHHTTHHHHHHH------TCEEECBH
T ss_pred cceEEEEE----eCCeEEEEECCCChHHHHHHHHHHHHhcCCCceEEEeCCCCchhccchHHHhhC------CcEEEecc
Confidence 56788988 46789999999874 24455555444357899999999999999999998764 46899998
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEE-E-ecCCCCceeeEEEEc--cEEEecCCCCC
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPL-P-VWHGAGYRSLGFRFG--NICYISDVSEI 190 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~-~-~~H~~~~~~~g~~i~--~v~~~gD~~~~ 190 (278)
...+.++.... . . ....+ +++.+++++.+++++ + ..|++ .+++|.+. +++|+||+...
T Consensus 110 ~~~~~~~~~~~---~---------~---~~~~~~~~~~~~~g~~~i~~~~~~pgHt~--g~~~~~~~~~~~lf~GD~~~~ 172 (227)
T 1mqo_A 110 LTAELAKKNGY---E---------E---PLGDLQTVTNLKFGNMKVETFYPGKGHTE--DNIVVWLPQYNILVGGCLVKS 172 (227)
T ss_dssp HHHHHHHHTTC---C---------C---CCCCBCSEEEEEETTEEEEEECCCCSSSS--SCCEEEETTTTEEEEETTSCC
T ss_pred chHHHHHhcCC---C---------C---CccccCCCCeeeECCEEEEEEecCCCCCC--CCEEEEECCCCEEEEeeeeec
Confidence 88776654210 0 0 01122 456788899999876 3 35887 67888886 89999998542
Q ss_pred CcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh--CCCeEEEEeeccCCC
Q 023686 191 PEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--QPKRTLFIGMMHLMD 246 (278)
Q Consensus 191 ~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l--~~~~~v~~h~~~~~~ 246 (278)
.. ...+. . . .......+.+.++.++++ .++.+++.|......
T Consensus 173 ~~--~~~~~--------~-~---~~~~~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~ 216 (227)
T 1mqo_A 173 TS--AKDLG--------N-V---ADAYVNEWSTSIENVLKRYRNINAVVPGHGEVGDK 216 (227)
T ss_dssp TT--CCSCC--------C-C---TTCCHHHHHHHHHHHHHHCCSCSEEEESSSCCBCT
T ss_pred cC--ccccC--------c-C---CCCCHHHHHHHHHHHHHhcCCCCEEEcCCCCcccc
Confidence 11 00000 0 0 111112234556666665 667888888765443
No 46
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=99.67 E-value=8.5e-16 Score=132.74 Aligned_cols=188 Identities=13% Similarity=0.123 Sum_probs=116.5
Q ss_pred cccceeEEEEccCCCCCceEEEecCcch---HHHHhhhCCcCCC--CCcCEEEeecCChhhhCChHHHHhhhccCCCCcc
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKFF---YHSALRWFPAYGI--RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIP 110 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~~---~~~~~~~l~~~~~--~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~ 110 (278)
....+|++|+ +++..+|||+|.+. ...+.+.+++.++ .+|++|++||.|.||++|+..+.+. +++
T Consensus 19 ~~~~n~~li~----~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~------~~~ 88 (317)
T 2zo4_A 19 LKTVNLYLLQ----GAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL------GAR 88 (317)
T ss_dssp TCEEEEEEEE----ETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT------TCE
T ss_pred CCcEEEEEEE----cCCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC------CCE
Confidence 4577899998 45689999999864 2335555656554 5799999999999999999998763 468
Q ss_pred EEeccccHHHHHhccccc----------cccccccCC--------------CCccceeeeec-cCCceeecceEEEEEEe
Q 023686 111 IYVAMRDFEVMKKTHYYL----------VDTSGIIPG--------------AAVSELQFNII-DEEPFTVQDLKITPLPV 165 (278)
Q Consensus 111 v~~~~~~~~~l~~~~~~~----------~~~~~~~~~--------------~~~~~~~~~~~-~~~~~~~g~~~i~~~~~ 165 (278)
||+++...+.+....... +........ ..........+ +++.+++++.+++++++
T Consensus 89 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~gg~~~~~i~t 168 (317)
T 2zo4_A 89 VFLHEEEFARGHRFWREPEAFAEASWRLFLDHGTPEGALQGIRETVEKTRERVHPPQNPLPLRDGEALEVAGKRLRVLWT 168 (317)
T ss_dssp EEEEGGGTTTHHHHHHCTTTSHHHHHHHHHHTTCCC-------CHHHHHHTTCCCCSSCEEECTTCEEEETTEEEEEEEC
T ss_pred EEEcHHHHHHHHhhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHhcccccccCCCCCCceEECCCCEEEeCCceEEEEEC
Confidence 999987766554321100 000000000 00000122333 67889999999988887
Q ss_pred c-CCCCceeeEEEEc--cEEEecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeec
Q 023686 166 W-HGAGYRSLGFRFG--NICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMM 242 (278)
Q Consensus 166 ~-H~~~~~~~g~~i~--~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~ 242 (278)
+ |++ .+++|.+. +++|+||+..... .. +... ....+ . ..-..+.+.++.+++++++.+++.|..
T Consensus 169 pGHt~--g~~~~~~~~~~~lf~GD~~~~~~--~~---~~~~--~~~~~---~-~~~~~~~~sl~~l~~l~~~~v~pgHg~ 235 (317)
T 2zo4_A 169 PGHAD--GHAAFYLEEEGVLLAGDALLEKV--SP---NVGL--WAYTR---E-NPLKDFLRSLDRLADLGARVAYAGHFG 235 (317)
T ss_dssp CSSST--TCEEEEETTTTEEEEETSCCSSS--CC---CCCC--CTTSC---S-CHHHHHHHHHHHHHTSCCSEEEESSSS
T ss_pred CCCCc--ccEEEEeCCCCEEEECCEecCCC--CC---CCcc--cCCCC---C-chHHHHHHHHHHHhcCCCCEEECCCCC
Confidence 5 777 56777775 8999999864211 00 0000 00000 0 001123456777778888899999987
Q ss_pred cCCC
Q 023686 243 HLMD 246 (278)
Q Consensus 243 ~~~~ 246 (278)
....
T Consensus 236 ~~~~ 239 (317)
T 2zo4_A 236 PIAD 239 (317)
T ss_dssp CBSC
T ss_pred ccCC
Confidence 7655
No 47
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=99.67 E-value=4.3e-16 Score=128.03 Aligned_cols=191 Identities=16% Similarity=0.116 Sum_probs=116.9
Q ss_pred ccceeEEEEccCCCCCceEEEecCcc--hHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEec
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVA 114 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~--~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~ 114 (278)
.+.+|++|. ++++.+|||+|.+ ....+.+.+++.+..+|++|++||.|.||++|+..+.+ ++++||++
T Consensus 21 ~~~n~~li~----~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~------~~~~v~~~ 90 (227)
T 3iog_A 21 VQENSMVYF----GAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS------IGAKVVST 90 (227)
T ss_dssp SCEEEEEEE----CSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH------TTCEEEEE
T ss_pred ccCcEEEEE----eCCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh------CCCeEEEC
Confidence 467788998 5678999999975 34566677767677899999999999999999999875 36899999
Q ss_pred cccHHHHHhccccccccc----cccCCCCccceeeeeccCCceeecceEEEEEE--ecCCCCceeeEEEEc--cEEEecC
Q 023686 115 MRDFEVMKKTHYYLVDTS----GIIPGAAVSELQFNIIDEEPFTVQDLKITPLP--VWHGAGYRSLGFRFG--NICYISD 186 (278)
Q Consensus 115 ~~~~~~l~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~--~~H~~~~~~~g~~i~--~v~~~gD 186 (278)
+...+.+++......... ...+........ ...++ .+.+++..++.+. ..|++ .++.+.+. +++| ||
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~l~~~~~~~~~~~pGHt~--g~~~~~~~~~~~lf-gd 165 (227)
T 3iog_A 91 RQTRDLMKSDWAEIVAFTRKGLPEYPDLPLVLPN-VVHDG-DFTLQEGKVRAFYAGPAHTP--DGIFVYFPDEQVLY-GG 165 (227)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTTSCCCCCCCCS-EEESS-CEEETTTTEEEECCCCSSSS--SCCEEEETTTTEEE-CG
T ss_pred HHHHHHHHHhhHHHHHHhhcCCCCCCCccccCCC-EeecC-eEEEcCcEEEEEecCCCCCC--CcEEEEecCCCEEE-cc
Confidence 988877764322110000 000000000001 12233 4777765555554 46887 56777775 8999 77
Q ss_pred CCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHH--HhCCCeEEEEeeccCCChhhHHHHHHHhhhh
Q 023686 187 VSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVR--KIQPKRTLFIGMMHLMDHEKVNEELLKLMET 260 (278)
Q Consensus 187 ~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~--~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~ 260 (278)
...... ... . ....-..+.+.++.++ .+.++.+++.|.......+ ..+...+.+++
T Consensus 166 ~l~~~~--~~~---~------------~~~~~~~~~~sl~~l~~~~l~~~~i~pgHg~~~~~~~-~i~~~~~~~~~ 223 (227)
T 3iog_A 166 CILKEK--LGN---L------------SFADVKAYPQTLERLKAMKLPIKTVIGGHDSPLHGPE-LIDHYEALIKA 223 (227)
T ss_dssp GGSCSS--CCC---C------------TTCCTTHHHHHHHHHHHTCCCCSEEECSSSCCEECTH-HHHHHHHHHHH
T ss_pred cccccC--CCC---c------------CcCCHHHHHHHHHHHHhccCCCCEEEeCCCCCcCCHH-HHHHHHHHHHH
Confidence 533210 000 0 0112234556677777 4578888888977655443 34444444443
No 48
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=99.67 E-value=3.5e-16 Score=127.19 Aligned_cols=141 Identities=18% Similarity=0.155 Sum_probs=95.5
Q ss_pred ccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccc
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 116 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~ 116 (278)
.+.+|++|+.+ .+++.+|||+|... ..+.+.+++.+. +|++|++||.|.||++|+..+.+.+ +++||+++.
T Consensus 11 ~~~n~~li~~~--~~~~~iLiD~G~~~-~~l~~~l~~~g~-~i~~ii~TH~H~DH~gg~~~l~~~~-----~~~v~~~~~ 81 (210)
T 2xf4_A 11 FSQNCSLIWCE--QTRLAALVDPGGDA-EKIKQEVDASGV-TLMQILLTHGHLDHVGAASELAQHY-----GVPVIGPEK 81 (210)
T ss_dssp TTEEEEEEECT--TTCEEEEECCCSCH-HHHHHHHHHHTC-EEEEEECSCSCHHHHTTHHHHHHHH-----TCCEECCCG
T ss_pred cccEEEEEEec--CCCcEEEEcCCCCH-HHHHHHHHHcCC-ceeEEEECCCChhhhcCHHHHHHHc-----CCcEEEecc
Confidence 45778999731 25689999999753 445555555565 6999999999999999999998764 478999988
Q ss_pred cHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEEc--cEEEecCCCC
Q 023686 117 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--NICYISDVSE 189 (278)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~--~v~~~gD~~~ 189 (278)
..+.+.+........... +............+++.+++++.++++++++ |++ .+++|.+. +++|+||+.+
T Consensus 82 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~g~~~i~~~~~pgHt~--g~~~~~~~~~~~lf~GD~~~ 154 (210)
T 2xf4_A 82 EDEFWLQGLPAQSRMFGL-DECQPLTPDRWLNDGDRVSVGNVTLQVLHCPGHTP--GHVVFFDEQSQLLISGDVIF 154 (210)
T ss_dssp GGHHHHHTHHHHHHHTTC-CCCCCCCCSBCCCTTCEEEETTEEEEEEECCSSST--TCEEEEETTTTEEEEETSEE
T ss_pred hHHHHhccchhhhhhcCC-cccCCCCCceEECCCCEEEECCeEEEEEECCCCCC--CcEEEEeCCCCEEEECCEec
Confidence 877665432111000000 0000000111223677899999999988876 666 67888885 9999999854
No 49
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=99.66 E-value=1.3e-15 Score=128.79 Aligned_cols=188 Identities=12% Similarity=0.124 Sum_probs=111.4
Q ss_pred cceeEEEEccCCCCCceEEEecCcch--HHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~~--~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
.++|++|. ++++.+|||+|.+. .+.+.+.+++..-..|++|++||.|.||++|+..+.+. .+++|+++
T Consensus 74 ~~N~ylv~----~~~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~------~~~v~~~~ 143 (270)
T 4eyb_A 74 ASNGLIVR----DGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA------GIATYANA 143 (270)
T ss_dssp EEEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT------TCEEEEEH
T ss_pred ceEEEEEE----ECCEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHC------CCeEEECH
Confidence 35788887 56899999999753 44566655554335899999999999999999999773 57899999
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEecCCCCceeeEEEEc--cEEEecCCCCCCc
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSEIPE 192 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~--~v~~~gD~~~~~~ 192 (278)
...+.+++.......... .......+ ++..+..+++.+......|++ .++.+.+. +++|+||+-....
T Consensus 144 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~g~~~~~~~~pgHT~--g~~~~~~~~~~vLfsGD~l~~~~ 214 (270)
T 4eyb_A 144 LSNQLAPQEGMVAAQHSL-------TFAANGWVEPATAPNFGPLKVFYPGPGHTS--DNITVGIDGTDIAFGGCLIKDSK 214 (270)
T ss_dssp HHHHHGGGGTCCCCSEEE-------CBCTTSBBCGGGSTTCTTEEEECCCSSSSS--SCCEEEETTSSEEECTTTCCCTT
T ss_pred HHHHHHHhcCcccccccc-------CCCCceeecCceeeecCceeEEecccccCC--CCEEEEecCCcEEEEeCeecCCC
Confidence 888777654322111110 00011112 334455566665444455887 44555554 9999999753211
Q ss_pred chhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh--CCCeEEEEeeccCCChhhHHHHHHHhhhh
Q 023686 193 ETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--QPKRTLFIGMMHLMDHEKVNEELLKLMET 260 (278)
Q Consensus 193 ~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l--~~~~~v~~h~~~~~~~~~~~~~~~~~~~~ 260 (278)
. ..+ . ......-..+.+.++.+.+. ..+.+++.|+..... ...+...+++++
T Consensus 215 -~-~~~--------~----~~~~~~~~~~~~Sl~~l~~~~~d~~~v~PGHG~p~~~--~~l~~t~~~~e~ 268 (270)
T 4eyb_A 215 -A-KSL--------G----NLGDADTEHYAASARAFGAAFPKASMIVMSHSAPDSR--AAITHTARMADK 268 (270)
T ss_dssp -C-SCC--------C----CCTTCCTTTHHHHHHHHHHHSTTCCEEECSSSCCBCT--HHHHHHHHHHHT
T ss_pred -C-CCc--------C----CCCCCCHHHHHHHHHHHHhhCCCCcEEEcCCCCCCCH--HHHHHHHHHHHH
Confidence 1 000 0 00111123466677777664 345677778765432 234455555543
No 50
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.66 E-value=2.1e-16 Score=132.29 Aligned_cols=147 Identities=19% Similarity=0.263 Sum_probs=98.6
Q ss_pred ccccccccCCCCCcccceeEEEEccCCCCCceEEEecCcch------------------------HHHHhhhCCcCCC--
Q 023686 23 PVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFF------------------------YHSALRWFPAYGI-- 76 (278)
Q Consensus 23 ~~c~~~~~~~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~------------------------~~~~~~~l~~~~~-- 76 (278)
..+.+...++.......+|++|+ .+++.||||+|.+. ...+.+.+++.++
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~lI~----~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~l~~~g~~~ 98 (254)
T 3dha_A 23 SSVNSALTPGKLLNLPVWCYLLE----TEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEEDRIVNILKRVGYEP 98 (254)
T ss_dssp GGTSTTSCSCCEEEEEEEEEEEE----ETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGGGSHHHHHHHHTCCG
T ss_pred hhccCCCCCCceEEEeeEEEEEE----CCCccEEEECCCChhhhcccccccccccccccccccCchhhHHHHHHHcCCCH
Confidence 34444444444445678899999 46789999999752 1234444445454
Q ss_pred CCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeeccCCceeec
Q 023686 77 RTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQ 156 (278)
Q Consensus 77 ~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 156 (278)
.+|++|++||.|+||++|++.+ ++.+||+++...+.+.....+... . ......+...+++...++
T Consensus 99 ~~I~~VilTH~H~DH~gg~~~~--------~~~~i~~~~~~~~~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~ 163 (254)
T 3dha_A 99 DDLLYIISSHLHFDHAGGNGAF--------TNTPIIVQRTEYEAALHREEYMKE-C------ILPHLNYKIIEGDYEVVP 163 (254)
T ss_dssp GGCSEEECSCCSHHHHTTGGGC--------SSSCEEEEHHHHHHHHHCTTSCGG-G------SCTTSCEEEECSSEEEET
T ss_pred HHCCEEEcCCChhhcCCChHHC--------CCCEEEECHHHHHHhhcccccccc-c------cCcccceEEecCCccccC
Confidence 4599999999999999999876 357899999888877553222100 0 112224455566666778
Q ss_pred ceEEEEEEecCCCCceeeEEEEc-----cEEEecCCCCCC
Q 023686 157 DLKITPLPVWHGAGYRSLGFRFG-----NICYISDVSEIP 191 (278)
Q Consensus 157 ~~~i~~~~~~H~~~~~~~g~~i~-----~v~~~gD~~~~~ 191 (278)
++++...| .|++ .+++|.+. +++|+||+.+..
T Consensus 164 ~i~~~~~p-GHt~--g~~~~~~~~~~~~~vl~~GD~~~~~ 200 (254)
T 3dha_A 164 GVQLLYTP-GHSP--GHQSLFIETEQSGSVLLTIDASYTK 200 (254)
T ss_dssp TEEEEECC-SSST--TCEEEEEEETTTEEEEEEETTCSSH
T ss_pred CEEEEECC-CCCC--CCEEEEEEeCCCCEEEEEecccchh
Confidence 87777666 4887 55666664 699999997643
No 51
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.66 E-value=1.3e-16 Score=135.16 Aligned_cols=155 Identities=21% Similarity=0.219 Sum_probs=98.6
Q ss_pred CCccccccccCCCCCcccceeEEEEccCCCCCceEEEecCcchH----------------HHHhhhCCcCC--CCCcCEE
Q 023686 21 KCPVCTKAVEPGNKNRRLNTSILIRYPGPSGRRNILIDAGKFFY----------------HSALRWFPAYG--IRTIDAV 82 (278)
Q Consensus 21 ~~~~c~~~~~~~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~~~----------------~~~~~~l~~~~--~~~Id~v 82 (278)
.|..|.....++.......+|++|+ .++..+|||+|.+.. ..+.+.|++.+ +.+|++|
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~li~----~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~V 92 (274)
T 3aj3_A 17 DGYHVFWNRGPGGEVRFPVYSILIE----HAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGLLGLEPRDIDVV 92 (274)
T ss_dssp EHHHHTTTTCCCSEEEEEEEEEEEE----ETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHHTTCCGGGCCEE
T ss_pred chHheecCCCCCcEEEeeEEEEEEE----eCCccEEEECCCCcccccCccccCCcccCccccHHHHHHHcCCCHHHCCEE
Confidence 4445555554443445677899998 456899999998742 22445555555 4579999
Q ss_pred EeecCChhhhCChHHHHhhhccCCCCccEEeccccHHHHHhccccc----cc--c--------ccc---cCCCCccceee
Q 023686 83 IITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMRDFEVMKKTHYYL----VD--T--------SGI---IPGAAVSELQF 145 (278)
Q Consensus 83 ~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~----~~--~--------~~~---~~~~~~~~~~~ 145 (278)
|+||.|+||++|+..+ ++.+||+++...+.+....... .. . ... .........++
T Consensus 93 ilTH~H~DH~gg~~~~--------~~a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (274)
T 3aj3_A 93 VNSHFHFDHCGGNKYF--------PHAKKICHRSEVPQACNPQPFEHLGYSDLSFSAEAAEARGATAQLLEGTTRANSTF 164 (274)
T ss_dssp ECSCCSGGGTTTGGGC--------TTSEEEEETTHHHHHHSCCGGGTTTTCCCTTCHHHHHHHTCGGGCCTTCCSTTSCE
T ss_pred EecCcCcccCCchhhC--------CCCEEEECHHHHHHHhCcCCccccccChhhhccccccccccccccccccccCCCCc
Confidence 9999999999999876 3578999998887775432110 00 0 000 00000112233
Q ss_pred eeccCCceeecc-eEEEEEEecCCCCceeeEEEEc-----cEEEecCCCCCC
Q 023686 146 NIIDEEPFTVQD-LKITPLPVWHGAGYRSLGFRFG-----NICYISDVSEIP 191 (278)
Q Consensus 146 ~~~~~~~~~~g~-~~i~~~~~~H~~~~~~~g~~i~-----~v~~~gD~~~~~ 191 (278)
..++ +.+++++ +++...|. |++ .+++|.+. +++|+||+.+..
T Consensus 165 ~~~~-~~~~l~g~~~v~~~pG-Ht~--g~~~~~~~~~~~~~~lf~GD~~~~~ 212 (274)
T 3aj3_A 165 EGID-GDVDLARGVKLISTPG-HSI--GHYSLLVEFPRRKPILFTIDAAYTQ 212 (274)
T ss_dssp EEEC-SSEEEETTEEEEECTT-SST--TCEEEEECCSSSCCEEEEETTCSSH
T ss_pred eEcC-CccccCCEEEEEECCC-CCc--eeeEEEEECCCCCEEEEEechhhhH
Confidence 4444 3577788 66665553 888 56788773 899999987643
No 52
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=99.66 E-value=3.6e-15 Score=122.89 Aligned_cols=165 Identities=18% Similarity=0.169 Sum_probs=112.0
Q ss_pred ccceeEEEEccCCCCCceEEEecCcc--hHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEec
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVA 114 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~--~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~ 114 (278)
.+++|++|+ .+++.+|||+|.+ ....+.+.+++.+. +|++|++||.|.||++|+..+.+. +++||++
T Consensus 31 ~~~n~~li~----~~~~~iliD~g~~~~~~~~~~~~l~~~g~-~i~~ii~TH~H~DH~gg~~~l~~~------~~~v~~~ 99 (228)
T 1jjt_A 31 VPKHGLVVL----VNAEAYLIDTPFTAKDTEKLVTWFVERGY-KIKGSISSHFHSDSTGGIEWLNSR------SIPTYAS 99 (228)
T ss_dssp EEEEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHTTTC-EEEEEECSSSSHHHHTTHHHHHHT------TCCEEEE
T ss_pred ccceEEEEE----ECCcEEEEeCCCChhhHHHHHHHHHHcCC-CeeEEEeCCCChhhhccHHHHHhC------CCEEEEC
Confidence 467899998 4578999999985 34556666666665 899999999999999999998762 5789999
Q ss_pred cccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEE-E-ecCCCCceeeEEEEc--cEEEecCCCCC
Q 023686 115 MRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPL-P-VWHGAGYRSLGFRFG--NICYISDVSEI 190 (278)
Q Consensus 115 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~-~-~~H~~~~~~~g~~i~--~v~~~gD~~~~ 190 (278)
+...+.+.+..... .. ..++++.+.+++..++++ + ..|++ .+++|.+. +++|+||+...
T Consensus 100 ~~~~~~~~~~~~~~------------~~---~~~~g~~~~l~~~~i~~~~~~pGHt~--g~~~~~~~~~~~lf~GD~~~~ 162 (228)
T 1jjt_A 100 ELTNELLKKDGKVQ------------AT---NSFSGVNYWLVKNKIEVFYPGPGHTP--DNVVVWLPERKILFGGCFIKP 162 (228)
T ss_dssp HHHHHHHHHTTCCC------------CS---EEECSSCCEEETTTEEEECCCCSSST--TCCEEEETTTTEEEEETTCCT
T ss_pred hHHHHHHHhcCCcC------------cc---ccccCcceEecCceEEEEecCCCCCC--CcEEEEECCCcEEEEeccccc
Confidence 98888776532110 00 112345666776666664 3 34887 66778875 99999998642
Q ss_pred CcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh--CCCeEEEEeeccCCC
Q 023686 191 PEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--QPKRTLFIGMMHLMD 246 (278)
Q Consensus 191 ~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l--~~~~~v~~h~~~~~~ 246 (278)
. ....+ ....-..+.+.++.++++ .++.+++.|......
T Consensus 163 ~--~~~~~---------------~~~d~~~~~~sl~~l~~~~~~~~~i~pgHg~~~~~ 203 (228)
T 1jjt_A 163 Y--GLGNL---------------GDANIEAWPKSAKLLKSKYGKAKLVVPSHSEVGDA 203 (228)
T ss_dssp T--CCCCC---------------TTCCTTTHHHHHHHHHHHTTTCSEEEESSSCCBCT
T ss_pred c--ccCcc---------------CccCHHHHHHHHHHHHhhcCCCCEEEcCCCCcCCH
Confidence 1 11000 011224466778888887 778888888766544
No 53
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=99.66 E-value=1.1e-15 Score=137.00 Aligned_cols=127 Identities=19% Similarity=0.168 Sum_probs=92.9
Q ss_pred cceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCc-CCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~-~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
..+|++|+ + ++.+|||+|.. ....+.+.+++ .+..+|++|++||.|.||++|+..+.+.+ ++.+||+++
T Consensus 40 ~~n~~li~----~-~~~iLID~G~~~~~~~~~~~l~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~----~~~~v~~~~ 110 (414)
T 2q9u_A 40 SYNSYFID----D-ECPTVIDSVKYPFAEEWLSRIAACCPLDKIKYVVMNHAEGDHASSLKDHYHKF----TNATFVCTK 110 (414)
T ss_dssp EECCEEEC----S-SSCEEECCCCGGGHHHHHHHHHHHSCGGGCCEEECSCCSGGGTTTHHHHGGGS----TTCEEEECH
T ss_pred ceeEEEEE----C-CCEEEEeCCCcccHHHHHHHHHHhcCcccCCEEEeCCCCcchhcCHHHHHHHC----CCCEEEECH
Confidence 46688888 3 67999999985 23444444433 34568999999999999999999998764 578999999
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEec--CCCCceeeEEEEc--cEEEecCCC
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVW--HGAGYRSLGFRFG--NICYISDVS 188 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~--H~~~~~~~g~~i~--~v~~~gD~~ 188 (278)
...+.+.+.+.. .......+ +++.+++++.++++++++ |++ .++.+... +++|+||..
T Consensus 111 ~~~~~~~~~~~~-------------~~~~~~~~~~g~~~~lg~~~~~~~~~p~gHt~--~~~~~~~~~~~~lf~GD~~ 173 (414)
T 2q9u_A 111 KCQEHLKILYGM-------------EKATWLIVDDKYTLKIGKRTLKFIPVPLLHWP--DSTFTYCPEDKILFSNDGF 173 (414)
T ss_dssp HHHHHHHHHHCC-------------TTCCEEECCTTCCEECSSCEEEEEECTTSSST--TCEEEEETTTTEEEEETTT
T ss_pred HHHHHHHHHhCC-------------CCCeeEEeCCCCEEEECCeEEEEEeCCCCCCC--CceEEEECCCeEEEEcccc
Confidence 888877653210 00122334 678899999999888887 877 45656654 999999964
No 54
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=99.65 E-value=5.5e-16 Score=129.24 Aligned_cols=124 Identities=16% Similarity=0.198 Sum_probs=93.2
Q ss_pred cccceeEEEEccCCC--CCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEe
Q 023686 36 RRLNTSILIRYPGPS--GRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 113 (278)
Q Consensus 36 ~~~~~s~li~~~~~~--~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~ 113 (278)
..+++||+|..+ . +++.+|||+|.+....+.+.+++.+. +|++|++||.|.||++|+..+.+.. +.++||+
T Consensus 12 ~~~~~~yli~~~--~~~~~~~ilID~g~~~~~~~~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~----~~~~v~~ 84 (245)
T 2gcu_A 12 ESSTFTYLLADV--SHPDKPALLIDPVDKTVDRDLKLIDELGL-KLIYAMNTHVHADHVTGTGLLKTKL----PGVKSVI 84 (245)
T ss_dssp TTTEEEEEEEET--TSTTCEEEEESCBGGGHHHHHHHHHHHTC-EEEEEECSSCCSSSCBSHHHHHHHS----TTCEEEE
T ss_pred CCceEEEEEEcC--CCCCCcEEEEeCCCchHHHHHHHHHHCCC-eeeEEEeCCCChhhhhhHHHHHHhC----CCCeEEe
Confidence 467889999841 1 36899999998755566666666675 6999999999999999999998743 4678999
Q ss_pred ccccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEEc--------cEEEe
Q 023686 114 AMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--------NICYI 184 (278)
Q Consensus 114 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~--------~v~~~ 184 (278)
++.... .......+++.+++++.+++++.++ |++ .+++|++. +++|+
T Consensus 85 ~~~~~~----------------------~~~~~~~~g~~~~~g~~~i~v~~tpGHt~--g~~~~~~~~~~~~~~~~~lft 140 (245)
T 2gcu_A 85 SKASGS----------------------KADLFLEPGDKVSIGDIYLEVRATPGHTA--GCVTYVTGEGADQPQPRMAFT 140 (245)
T ss_dssp EGGGCC----------------------CCSEEECTTCEEEETTEEEEEEECCSSST--TCEEEEECCSTTSCSSCEEEE
T ss_pred cccccc----------------------cCCEEcCCCCEEEECCEEEEEEECCCCCC--CCEEEEECCccccccccEEEE
Confidence 875421 0011233678899999999988875 777 67888875 49999
Q ss_pred cCCCCC
Q 023686 185 SDVSEI 190 (278)
Q Consensus 185 gD~~~~ 190 (278)
||+...
T Consensus 141 GD~~~~ 146 (245)
T 2gcu_A 141 GDAVLI 146 (245)
T ss_dssp ETTSBT
T ss_pred CCcccc
Confidence 998653
No 55
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=99.65 E-value=4.9e-16 Score=133.54 Aligned_cols=188 Identities=13% Similarity=0.054 Sum_probs=112.8
Q ss_pred ccceeEEEEccCCCCCceEEEecCcch-HHHHhhhCCcC--CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEe
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFF-YHSALRWFPAY--GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 113 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~-~~~~~~~l~~~--~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~ 113 (278)
...+|++|+. .+++.+|||+|.+. ...+.+.+++. +..+|++|++||.|.||++|+..+.+.+ ++++||+
T Consensus 22 ~~~n~~li~~---~~~~~iLID~G~~~~~~~~~~~l~~~~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~----~~a~v~~ 94 (303)
T 2vw8_A 22 VQVPVFLLRL---GEASWALVEGGISRDAELVWADLCRWVADPSQVHYWLITHKHYDHCGLLPYLCPRL----PNVQVLA 94 (303)
T ss_dssp TTSCEEEEEE---ETTEEEEECCCCGGGHHHHHHHHHHHCSCGGGEEEEECCCCSTTTTTTHHHHGGGC----TTCEEEE
T ss_pred CCceEEEEEe---CCCceEEEECCCCCcHHHHHHHHHHHhcCcccceEEEeccCCccccCCHHHHHHhC----CCCeEEE
Confidence 3566888821 35789999999863 33333333332 4578999999999999999999998764 5689999
Q ss_pred ccccHHHHHhcccc----ccc---cccccC---CCCccceeeeec-cCCceeecc-eEEEEEEec-CCCCceeeEEEEc-
Q 023686 114 AMRDFEVMKKTHYY----LVD---TSGIIP---GAAVSELQFNII-DEEPFTVQD-LKITPLPVW-HGAGYRSLGFRFG- 179 (278)
Q Consensus 114 ~~~~~~~l~~~~~~----~~~---~~~~~~---~~~~~~~~~~~~-~~~~~~~g~-~~i~~~~~~-H~~~~~~~g~~i~- 179 (278)
++...+.+.+.... .+. ...+.+ ...........+ +++.+++++ .++++++++ |++ .+++|.+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~lg~g~~l~~i~~pGHt~--g~~~~~~~~ 172 (303)
T 2vw8_A 95 SERTCQAWKSESAVRVVERLNRQLLRAEQRLPEACAWDALPVRAVADGEWLELGPRHRLQVIEAHGHSD--DHVVFYDVR 172 (303)
T ss_dssp EHHHHHHTTCHHHHHHHHHHHHHTCCTTCCCCCCCCGGGSCEEEECTTCEEEEETTEEEEEEECTTSST--TCEEEEETT
T ss_pred CHHHHHHHhccchhhHHHHHHHHHHHhhcccccccCCCCCCceEcCCCCEEecCCCeEEEEEECCCCCc--ccEEEEECC
Confidence 99877655431100 000 000000 001111223344 677889987 888877764 777 67788885
Q ss_pred -cEEEecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCC-eEEEEeeccCC
Q 023686 180 -NICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPK-RTLFIGMMHLM 245 (278)
Q Consensus 180 -~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~-~~v~~h~~~~~ 245 (278)
+++|+||+...... .......+ .. ..-..+.+.++.+++++++ .+++.|.....
T Consensus 173 ~~~lf~GD~~~~~~~------~~~~~~~~-~~-----~d~~~~~~sl~~l~~l~~~~~v~pgHg~~~~ 228 (303)
T 2vw8_A 173 RRRLFCGDALGEFDE------AEGVWRPL-VF-----DDMEAYLESLERLQRLPTLLQLIPGHGGLLR 228 (303)
T ss_dssp TTEEEEETTTCEECT------TTCSEECC-CS-----SCHHHHHHHHHHHHTSSCCSEEEESSSCEEE
T ss_pred CCEEEEcCccCcccC------cccccCCC-CC-----CCHHHHHHHHHHHhcCCCCeEEECCCCCccC
Confidence 99999998431110 00111111 00 1112234556777778888 88888876543
No 56
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=99.65 E-value=3.5e-15 Score=125.81 Aligned_cols=186 Identities=12% Similarity=0.092 Sum_probs=116.4
Q ss_pred cccceeEEEEccCCCCCceEEEecCcc--hHHHHhhhCCcC-CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEE
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIY 112 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~--~~~~~~~~l~~~-~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~ 112 (278)
....+|++|+ ++++.+|||+|.+ ....+.+.+++. +. +|++|++||.|.||++|+..+.+ .+++||
T Consensus 65 ~~~~n~~li~----~~~~~iLID~G~~~~~~~~l~~~l~~~~g~-~i~~VilTH~H~DH~gg~~~~~~------~~a~v~ 133 (265)
T 2y8b_A 65 VYSSNGLIVR----DADELLLIDTAWGAKNTVALLAEIEKQIGL-PVTRSISTHFHDDRVGGVDVLRA------AGVATY 133 (265)
T ss_dssp EEEEEEEEEE----ETTEEEEESCCSSHHHHHHHHHHHHHHTCS-CEEEEECSSSSHHHHTTHHHHHH------TTCEEE
T ss_pred cccceEEEEE----ECCeEEEEeCCCCHHHHHHHHHHHHHhcCC-CeEEEEeCCCChhhcCCHHHHhh------CCCeEE
Confidence 3467889998 4678999999975 334555555555 54 89999999999999999998876 257899
Q ss_pred eccccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEecCCCCceeeEEEEc--cEEEecCCCCC
Q 023686 113 VAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSEI 190 (278)
Q Consensus 113 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~--~v~~~gD~~~~ 190 (278)
+++...+.+.+....... . .+.....+++.+.++++++......|++ .+++|.+. +++|+||+...
T Consensus 134 ~~~~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~~~~g~~~v~~~~pGHt~--g~~~~~~~~~~~lf~GD~~~~ 201 (265)
T 2y8b_A 134 TSPLTRQLAEAAGNEVPA---------H-SLKALSSSGDVVRFGPVEVFYPGAAHSG--DNLVVYVPAVRVLFGGCAVHE 201 (265)
T ss_dssp ECHHHHHHHHHTTCCCCS---------E-ECSSCSSTTEEEEETTEEEEECCSSSST--TCCEEEETTTTEEEEETTSCC
T ss_pred ECHHHHHHHHhccccccc---------c-cccccCCCCcEEeecCEEEEecCCCCCC--CCEEEEecCCCEEEEcccccc
Confidence 999988877653211100 0 0000012445677788888533345888 66778875 89999998653
Q ss_pred CcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh--CCCeEEEEeeccCCChhhHHHHHHHhhhh
Q 023686 191 PEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI--QPKRTLFIGMMHLMDHEKVNEELLKLMET 260 (278)
Q Consensus 191 ~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l--~~~~~v~~h~~~~~~~~~~~~~~~~~~~~ 260 (278)
... ..+ ...+ ......+.+.++.+.++ ..+.+++.|...... ...+...+..+.
T Consensus 202 ~~~-------~~~---~~~~----~~d~~~~~~sl~~l~~~~~~~~~v~pgHg~~~~~--~~~~~~~~~l~~ 257 (265)
T 2y8b_A 202 ASR-------ESA---GNVA----DANLAEWPATIKRIQQRYPEAEVVIPGHGLPGGL--ELLQHTTNVVKT 257 (265)
T ss_dssp TTC-------CSC---CCCT----TCCTTTHHHHHHHHHHHCTTCSEEEESSSCCBCT--HHHHHHHHHHC-
T ss_pred CCC-------ccc---CcCC----cCCHHHHHHHHHHHHhhCCCCCEEECCCCCCCCH--HHHHHHHHHHHH
Confidence 210 000 0000 11223456667777776 567778888665432 234444454443
No 57
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=99.64 E-value=4.9e-15 Score=123.29 Aligned_cols=180 Identities=9% Similarity=0.039 Sum_probs=113.3
Q ss_pred ccceeEEEEccCCCCCceEEEecCcc--hHHHHhhhCCcC-CCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEe
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKF--FYHSALRWFPAY-GIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYV 113 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~--~~~~~~~~l~~~-~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~ 113 (278)
.+.+|++|+. .++..+|||+|.+ ....+.+.+++. +.+.+ +|++||.|.||++|+..+.+ . +++||+
T Consensus 28 ~~~n~~li~~---~~~~~iLiD~G~~~~~~~~l~~~l~~~~~~~~~-~vi~TH~H~DH~gg~~~l~~-~-----~~~v~~ 97 (246)
T 2fhx_A 28 YSSNVLVAKM---LDGTVVIVSSPFENLGTQTLMDWVAKTMKPKKV-VAINTHFHLDGTGGNEIYKK-M-----GAETWS 97 (246)
T ss_dssp TTEEEEEEEC---TTSEEEEESCCSSHHHHHHHHHHHHHHHCCSEE-EEECCSSSHHHHTTHHHHHH-T-----TCEEEE
T ss_pred CCCCEEEEEe---CCCeEEEEeCCCCHHHHHHHHHHHHHhcCCCcE-EEEeCCCCccccChHHHHhh-c-----CCEEEE
Confidence 3467888873 2357999999985 234455555443 55556 89999999999999998875 2 578999
Q ss_pred ccccHHHHHhccccc-------ccccc----ccCCCCccceeeeec-cCCceeecceEEEEEE-e-cCCCCceeeEEEEc
Q 023686 114 AMRDFEVMKKTHYYL-------VDTSG----IIPGAAVSELQFNII-DEEPFTVQDLKITPLP-V-WHGAGYRSLGFRFG 179 (278)
Q Consensus 114 ~~~~~~~l~~~~~~~-------~~~~~----~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~-~-~H~~~~~~~g~~i~ 179 (278)
++...+.+....... +.... ...........+..+ +++.+++++.+++++. + .|++ .+++|.+.
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~g~~~i~~~~~~pGHt~--g~~~~~~~ 175 (246)
T 2fhx_A 98 SDLTKQLRLEENKKDRIKAAEFYKNEDLKRRILSSHPVPADNVFDLKQGKVFSFSNELVEVSFPGPAHSP--DNVVVYFP 175 (246)
T ss_dssp EHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHTCCCCCSEEECTTTCEEEEETTEEEEEECCCCSSST--TCCEEEET
T ss_pred cHHHHHHHHhcchhhhHHHHhhhccccchhhhcccccCCCCceeecCCCCEEEECCEEEEEEeCCCCCCC--CCEEEEEc
Confidence 998887765422110 00000 000001111122233 5678899999998873 4 4887 66788885
Q ss_pred --cEEEecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEeeccCC
Q 023686 180 --NICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIGMMHLM 245 (278)
Q Consensus 180 --~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~ 245 (278)
+++|+||+... . ... + . ....-..+.+.++.+++++++.+++.|.....
T Consensus 176 ~~~~lf~GD~~~~-~-~~~-----~-------~---~~~~~~~~~~sl~~l~~l~~~~i~pgHg~~~~ 226 (246)
T 2fhx_A 176 KKKLLFGGCMIKP-K-ELG-----Y-------L---GDANVKAWPDSARRLKKFDAKIVIPGHGEWGG 226 (246)
T ss_dssp TTTEEEEETTCCS-S-CCC-----C-------C---TTCCTTTHHHHHHHGGGSCCSEEEESBSCCBS
T ss_pred CCCEEEECCEecc-C-CCC-----C-------C---CCCCHHHHHHHHHHHHhCCCCEEECCCCCcCC
Confidence 99999998642 1 110 0 0 11123446677788888888888998977544
No 58
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=99.62 E-value=1.9e-15 Score=122.65 Aligned_cols=134 Identities=18% Similarity=0.256 Sum_probs=89.5
Q ss_pred ccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccc
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 116 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~ 116 (278)
.+.+|++|+ ++++.+|||+|.+. ..+.+.+++.+. +|++|++||.|.||++|+..+.+.+ +++||+++.
T Consensus 11 ~~~n~~li~----~~~~~iliD~G~~~-~~l~~~l~~~g~-~i~~vilTH~H~DH~gg~~~l~~~~-----~~~v~~~~~ 79 (207)
T 2zwr_A 11 LQENAYLVE----TGEGPVLIDPGDEP-EKLLALFQTTGL-IPLAILLTHAHFDHVGAVAPLVEAL-----DLPVYLHPL 79 (207)
T ss_dssp TTEEEEEEE----ETTEEEEECCCSCH-HHHHHHHHHHTC-CCSCEECSCCCGGGTTTHHHHHHHH-----CCCEEECGG
T ss_pred cccEEEEEE----eCCcEEEEeCCCCH-HHHHHHHHHcCC-cccEEEECCCChHHHccHHHHHHHh-----CCcEEECHH
Confidence 567899998 45789999999754 345555555564 5999999999999999999998754 478999999
Q ss_pred cHHHHHhccccccccccccCCCCccceeeeec-cCCceeecceEEEEEEecCCCCceeeEEEEc--cEEEecCCCC
Q 023686 117 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGFRFG--NICYISDVSE 189 (278)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~--~v~~~gD~~~ 189 (278)
..+.+.+.......+.. +...... ....+ +++.+. ++++...|. |++ .+++|.+. +++|+||+..
T Consensus 80 ~~~~~~~~~~~~~~~g~--~~~~~~~-~~~~~~~g~~i~--~~~~~~~pG-Ht~--g~~~~~~~~~~~lf~GD~~~ 147 (207)
T 2zwr_A 80 DLPLYEGADLAARAWGL--AIPKPPL-PVRPLEEGMRLF--GFQVLHLPG-HSP--GHVAFYDPEGAQVFSGDLLF 147 (207)
T ss_dssp GHHHHHTHHHHHHHTTC--CCCCCCS-CCEECCTTCEET--TEEEEECCS-SST--TCEEEEETTTTEEEEETSEE
T ss_pred HHHHHhCchhhhhhcCC--CCCcCCC-CceEeCCCCEEE--EEEEEeCCC-CCC--CcEEEEECCCCEEEEecccC
Confidence 98877643211100000 0000000 11223 455554 566665554 887 67888885 9999999854
No 59
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=99.62 E-value=2.3e-15 Score=126.11 Aligned_cols=122 Identities=14% Similarity=0.209 Sum_probs=89.4
Q ss_pred ccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccc
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 116 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~ 116 (278)
+.|+||+|..+ .++..+|||+|.. ..+.+.+++.+. +|++|++||.|+||++|+..+.+.+ +++||+++.
T Consensus 10 ~~n~~yli~~~--~~~~~~lID~g~~--~~i~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~-----~~~v~~~~~ 79 (254)
T 1xm8_A 10 KDNYAYILHDE--DTGTVGVVDPSEA--EPIIDSLKRSGR-NLTYILNTHHHYDHTGGNLELKDRY-----GAKVIGSAM 79 (254)
T ss_dssp TTEEEEEEECT--TTCCEEEECCSSH--HHHHHHHHHHTC-CCCEEECSSCCHHHHTTHHHHHHHH-----CCEEEEEGG
T ss_pred CCeEEEEEEEC--CCCEEEEEeCCCH--HHHHHHHHHcCC-CccEEEECCCCCcccccHHHHHHHc-----CCeEEEchh
Confidence 56779999831 1367999999953 334555555564 7999999999999999999998865 478999886
Q ss_pred cHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEEc--cEEEecCCCC
Q 023686 117 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--NICYISDVSE 189 (278)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~--~v~~~gD~~~ 189 (278)
..+.+. + ......+++.+.+++.++++++++ |++ .+++|.+. +++|+||+..
T Consensus 80 ~~~~~~--------------~-----~~~~~~~g~~~~lg~~~~~vi~tPGHt~--g~~~~~~~~~~~lftGD~l~ 134 (254)
T 1xm8_A 80 DKDRIP--------------G-----IDMALKDGDKWMFAGHEVHVMDTPGHTK--GHISLYFPGSRAIFTGDTMF 134 (254)
T ss_dssp GGGGST--------------T-----EEEEECTTCEEEETTEEEEEEECCSSSS--SCEEEEEGGGTEEEEETTEE
T ss_pred hhhcCC--------------C-----CceeeCCCCEEEECCEEEEEEECCCCCC--CcEEEEECCCCEEEEcCccc
Confidence 543211 0 112233678899999888888764 777 67888885 8999999854
No 60
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=99.61 E-value=3.6e-15 Score=125.19 Aligned_cols=120 Identities=18% Similarity=0.236 Sum_probs=88.9
Q ss_pred ccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccc
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 116 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~ 116 (278)
++|+|++|.. .+++.+|||+|.. ..+.+.+++.+. +|++|++||.|.||++|+..+.+.+ +..+||+++.
T Consensus 17 ~~n~~yli~~---~~~~~vlID~G~~--~~i~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~----~~~~v~~~~~ 86 (258)
T 2qed_A 17 QDNYIWVLTN---DEGRCVIVDPGEA--APVLKAIAEHKW-MPEAIFLTHHHHDHVGGVKELLQHF----PQMTVYGPAE 86 (258)
T ss_dssp TTEEEEEEEC---TTSEEEEECCSCH--HHHHHHHHHHTC-EEEEEECCSCCHHHHTTHHHHHHHC----TTCEEEECGG
T ss_pred CceEEEEEEE---CCCcEEEEeCCCc--HHHHHHHHHcCC-CCCEEEeCCCCccccCCHHHHHHHC----CCCEEEeccc
Confidence 4677999982 1578999999964 345555555666 8999999999999999999998865 3478999875
Q ss_pred cHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEEccEEEecCCCC
Q 023686 117 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFGNICYISDVSE 189 (278)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~~v~~~gD~~~ 189 (278)
.. . . . ......+++.+++++.++++++++ |++ .+++|.-.+++|+||+..
T Consensus 87 ~~------~----~------~-----~~~~~~~g~~~~~g~~~~~vi~tPGHt~--g~~~~~~~~~lftGD~l~ 137 (258)
T 2qed_A 87 TQ------D----K------G-----ATHLVGDGDTIRVLGEKFTLFATPGHTL--GHVCYFSRPYLFCGDTLF 137 (258)
T ss_dssp GG------G----G------T-----CSEECCTTCEEEETTEEEEEEECCSSST--TCEEEEETTEEEEETTEE
T ss_pred cc------C----C------C-----CcEEeCCCCEEEECCcEEEEEECCCCCC--CCeEEEcCCEEEECCCCC
Confidence 41 0 0 0 011223678899999999888875 777 667777559999999854
No 61
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=99.59 E-value=4.3e-15 Score=124.84 Aligned_cols=120 Identities=17% Similarity=0.204 Sum_probs=88.4
Q ss_pred ccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccc
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 116 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~ 116 (278)
+.|+||+|..+ .+++.+|||+|.. ..+.+.+++.++ +|++|++||.|+||++|+..+.+.+ +..+||+++.
T Consensus 10 ~~n~~yli~~~--~~~~~vlID~G~~--~~i~~~l~~~g~-~i~~IllTH~H~DH~gg~~~l~~~~----~~~~v~~~~~ 80 (260)
T 1qh5_A 10 TDNYMYLVIDD--ETKEAAIVDPVQP--QKVVDAARKHGV-KLTTVLTTHHHWDHAGGNEKLVKLE----SGLKVYGGDD 80 (260)
T ss_dssp TTEEEEEEEET--TTTEEEEESCSSH--HHHHHHHHHHTC-EEEEEECCCSSHHHHTTHHHHHHHS----TTCEEEESCT
T ss_pred CceEEEEEEEC--CCCEEEEEcCCCH--HHHHHHHHHcCC-CccEEEeCCCCccccCCHHHHHHHC----CCCEEEECcc
Confidence 56778999842 1468999999953 445555666665 6999999999999999999998865 3578999863
Q ss_pred cHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEE-------ccEEEecCCC
Q 023686 117 DFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRF-------GNICYISDVS 188 (278)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i-------~~v~~~gD~~ 188 (278)
... .......+++.+++++.++++++++ |++ .+++|.+ .+++|+||+.
T Consensus 81 ~~~----------------------~~~~~~~~g~~~~~g~~~~~vi~tPGHt~--g~~~~~~~~~~~~~~~~lftGD~l 136 (260)
T 1qh5_A 81 RIG----------------------ALTHKITHLSTLQVGSLNVKCLATPCHTS--GHICYFVSKPGGSEPPAVFTGDTL 136 (260)
T ss_dssp TST----------------------TCSEECCTTCEEEETTEEEEEEECCSSST--TCEEEEEECSSSSSCCEEEEETTE
T ss_pred cCC----------------------CCCEEeCCCCEEEECCEEEEEEECCCCCC--CCEEEEEeccCCCCCCEEEEcCcc
Confidence 210 0111233678899999988888765 777 6788887 2899999984
Q ss_pred C
Q 023686 189 E 189 (278)
Q Consensus 189 ~ 189 (278)
.
T Consensus 137 ~ 137 (260)
T 1qh5_A 137 F 137 (260)
T ss_dssp E
T ss_pred c
Confidence 3
No 62
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.57 E-value=1.9e-15 Score=124.02 Aligned_cols=151 Identities=23% Similarity=0.289 Sum_probs=91.9
Q ss_pred cccccccc-CCCCCcccceeEEEEccCCCCCceEEEecCcc-hHHHHhhhCCcCC--CCCcCEEEeecCChhhhCChHHH
Q 023686 23 PVCTKAVE-PGNKNRRLNTSILIRYPGPSGRRNILIDAGKF-FYHSALRWFPAYG--IRTIDAVIITHSHADAIGGLDDL 98 (278)
Q Consensus 23 ~~c~~~~~-~~~~~~~~~~s~li~~~~~~~~~~iLiD~G~~-~~~~~~~~l~~~~--~~~Id~v~iTH~H~DH~~gl~~l 98 (278)
..+.+-.. |++......+|++|+ .++..+|||+|.. ....+.+.+++.+ +.+|++||+||.|+||++|+..+
T Consensus 18 ~~~~g~~~~p~~~~~~~~n~~li~----~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~~~~ 93 (221)
T 1ztc_A 18 LVTGGNVFVPGRLNAHFSTVVYLE----HKDRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNSVLF 93 (221)
T ss_dssp EECCBEEEETTTEECCBCCEEEEE----ETTEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGGGGC
T ss_pred EEecceEEecCCCCCCceEEEEEE----eCCeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCchhhC
Confidence 33343333 566666788999998 4678999999984 3444555555554 45899999999999999999876
Q ss_pred HhhhccCCCCccEEeccccHHHHHhccccccccc-cccCCCCccceeeeec-cCCceeecceEEEEEEecCCCCceeeEE
Q 023686 99 RDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTS-GIIPGAAVSELQFNII-DEEPFTVQDLKITPLPVWHGAGYRSLGF 176 (278)
Q Consensus 99 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~H~~~~~~~g~ 176 (278)
. +.+||+++.. +.+....+.... ............+..+ +++.+..+++++..+| .|++ .+++|
T Consensus 94 ~--------~~~v~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~v~~~p-GHt~--g~~~~ 159 (221)
T 1ztc_A 94 E--------NATFYVHEVY---KTKNYLSFGTIVGRIYSKVISSWKNVVLLKGEESLFDEKVKVFHTP-WHAR--EHLSF 159 (221)
T ss_dssp T--------TCEEEEEGGG---GGSCGGGGCHHHHHHHHHHHHTCCSEEEECSCCEETTTTEEEEECC-SSST--TCEEE
T ss_pred C--------CCEEEEeHHH---hhhhhhhhccchhhhhhhccccccceEEeCCCCEEECCeEEEEEcC-CCCc--ccEEE
Confidence 3 4689998872 211111000000 0000000000123334 3444442367777776 5887 67777
Q ss_pred EEc-----cEEEecCCCCCC
Q 023686 177 RFG-----NICYISDVSEIP 191 (278)
Q Consensus 177 ~i~-----~v~~~gD~~~~~ 191 (278)
.+. +++|+||+....
T Consensus 160 ~~~~~~~~~vlftGD~~~~~ 179 (221)
T 1ztc_A 160 LLDTENAGRVLITGDITPNR 179 (221)
T ss_dssp EEEETTTEEEEECGGGSCSH
T ss_pred EEEcCCCCeEEEEeCccccc
Confidence 774 799999987543
No 63
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=99.56 E-value=1.6e-14 Score=124.41 Aligned_cols=128 Identities=16% Similarity=0.181 Sum_probs=86.1
Q ss_pred ccceeEEEEccCCCCCceEEEecCcch---HHHHhhhCCcCC----CCCcCEEEeecCChhhhCChHHHHhhhcc--CCC
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFF---YHSALRWFPAYG----IRTIDAVIITHSHADAIGGLDDLRDWTNN--VQR 107 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~---~~~~~~~l~~~~----~~~Id~v~iTH~H~DH~~gl~~l~~~~~~--~~~ 107 (278)
+.|+||+|..+ .+++.+|||+|... ...+.+.+++.+ +.+|++||+||.|+||++|+..+.+.+.. ...
T Consensus 38 ~~n~~ylI~~~--~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l~~~~~~~~~~~ 115 (311)
T 2p18_A 38 KDNFSYLINDH--TTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKLKAELEAMNSTV 115 (311)
T ss_dssp TTEEEEEEEET--TTTEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHHHHHHHSCC--C
T ss_pred CCcEEEEEEeC--CCCcEEEEeCCCChHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHHHHhhhhcccCC
Confidence 46779999841 14789999997542 222333333336 25899999999999999999999876510 001
Q ss_pred CccEEeccccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEe-cCCCCceeeEEEE-------c
Q 023686 108 HIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPV-WHGAGYRSLGFRF-------G 179 (278)
Q Consensus 108 ~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~-~H~~~~~~~g~~i-------~ 179 (278)
+.+||+++... . + .......+++.+++++.+++++++ .|++ .+++|.+ .
T Consensus 116 ~~~v~~~~~~~------~----------~-----~~~~~l~~g~~l~lg~~~l~vi~tPGHT~--g~i~~~~~~~~~~~~ 172 (311)
T 2p18_A 116 PVVVVGGANDS------I----------P-----AVTKPVREGDRVQVGDLSVEVIDAPCHTR--GHVLYKVQHPQHPND 172 (311)
T ss_dssp CCEEEEEGGGT------C----------T-----TCSEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEECTTCGGG
T ss_pred CCEEEEechhc------C----------C-----CCceEeCCCCEEEECCeEEEEEECCCCCc--ccEEEEEecCCcCCc
Confidence 47899986531 0 0 011223367889999999988887 4777 6788887 4
Q ss_pred -cEEEecCCCC
Q 023686 180 -NICYISDVSE 189 (278)
Q Consensus 180 -~v~~~gD~~~ 189 (278)
+++|+||+..
T Consensus 173 ~~~lftGD~l~ 183 (311)
T 2p18_A 173 GVALFTGDTMF 183 (311)
T ss_dssp CEEEEEETTEE
T ss_pred CCEEEEcCccc
Confidence 7999999854
No 64
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=99.56 E-value=2e-15 Score=128.22 Aligned_cols=145 Identities=17% Similarity=0.155 Sum_probs=89.4
Q ss_pred CcccceeEEEEccCCCCCceEEEecCcchH---------------HHHhhhCCcCC--CCCcCEEEeecCChhhhCChHH
Q 023686 35 NRRLNTSILIRYPGPSGRRNILIDAGKFFY---------------HSALRWFPAYG--IRTIDAVIITHSHADAIGGLDD 97 (278)
Q Consensus 35 ~~~~~~s~li~~~~~~~~~~iLiD~G~~~~---------------~~~~~~l~~~~--~~~Id~v~iTH~H~DH~~gl~~ 97 (278)
...+.+|++|+ .+++.+|||||.+.. ..+.+.++..+ +.+||+|++||.|.||++|+..
T Consensus 44 ~~~~~n~~lI~----~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~ 119 (280)
T 3esh_A 44 INLPTHPILIQ----TAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTD 119 (280)
T ss_dssp EEEECCCEEEE----CSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSC
T ss_pred EEEeEEEEEEE----ECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccc
Confidence 34577899998 567899999997531 23444455555 4589999999999999999998
Q ss_pred HHhhhccCCCCccEEeccccHHHHHhccccccccccccCCCCccceeeeeccCCceee-cceEEEEEEecCCCCceeeEE
Q 023686 98 LRDWTNNVQRHIPIYVAMRDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTV-QDLKITPLPVWHGAGYRSLGF 176 (278)
Q Consensus 98 l~~~~~~~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~i~~~~~~H~~~~~~~g~ 176 (278)
+.+. ...++++||+++...+.+......... .............+..+++. .++ +++++...| .|++ .+++|
T Consensus 120 l~~~--~~fp~a~i~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~l~~gi~~~~~p-GHt~--g~~~~ 192 (280)
T 3esh_A 120 QAGH--AIFENAIHVVQQDEWHEFIAPNIRSKS-TYWDKNKGDYSNKLILFEKH-FEPVPGIKMQHSG-GHSF--GHTII 192 (280)
T ss_dssp TTSC--CSSTTCEEEEEHHHHHHHHSCCTTGGG-TSCGGGCCGGGGGEEEESSE-ECSSTTEEEEECC-SSST--TCEEE
T ss_pred cccc--cCCCCCEEEECHHHHHHhhCccccccc-chhhhhhhhhhheEEEeCCC-CeEcCCEEEEEcC-CCCc--ccEEE
Confidence 8762 012578999999888877643211100 00000000001122333321 222 356664444 3787 56788
Q ss_pred EEc----cEEEecCCCCC
Q 023686 177 RFG----NICYISDVSEI 190 (278)
Q Consensus 177 ~i~----~v~~~gD~~~~ 190 (278)
.+. +++|+||+.+.
T Consensus 193 ~i~~~~~~vlftGD~~~~ 210 (280)
T 3esh_A 193 TIESQGDKAVHMGDIFPT 210 (280)
T ss_dssp EEEETTEEEEECGGGSCS
T ss_pred EEEECCcEEEEEEccCCc
Confidence 874 79999998653
No 65
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=99.55 E-value=6.4e-15 Score=134.27 Aligned_cols=128 Identities=18% Similarity=0.173 Sum_probs=92.9
Q ss_pred ccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEeccc
Q 023686 37 RLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAMR 116 (278)
Q Consensus 37 ~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~~ 116 (278)
.+++||+|... .+++++|||+|.+. ..+.+.+++.+. +|++||+||.|.||++|+..+.+.+ +++||+++.
T Consensus 14 ~~~n~yli~~~--~~~~~ilID~g~~~-~~~~~~l~~~~~-~i~~Il~TH~H~DH~gg~~~l~~~~-----~~~i~~~~~ 84 (474)
T 3tp9_A 14 LAHASYLVGCQ--ETGEACVIDPARDV-EPYLLTAKREGL-RIVAALETHIHADFVSGAREMADRA-----GAAICVSDE 84 (474)
T ss_dssp TTEEEEEEEET--TTCEEEEESCCSCC-HHHHHHHHHHTC-EEEEEECSSCCSSSCCCHHHHHHHH-----CCEEEEECC
T ss_pred ceeEEEEEEEC--CCCEEEEEcCCCCh-HHHHHHHHHcCC-eeEEEEcCcCchhhhCCHHHHHHHH-----CCcEEEcCc
Confidence 56889999321 46789999999764 345555556665 7999999999999999999998865 578999887
Q ss_pred cHHHHHhccccccccccccCCCCcccee-eeeccCCceeecceEEEEEEec-CCCCceeeEEEEc---------cEEEec
Q 023686 117 DFEVMKKTHYYLVDTSGIIPGAAVSELQ-FNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG---------NICYIS 185 (278)
Q Consensus 117 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~---------~v~~~g 185 (278)
....+...+ ..... ....+++.+.+++.+++++.++ |++ .+++|.+. +++|+|
T Consensus 85 ~~~~~~~~~--------------~~~~~~~~~~~g~~~~~g~~~i~~i~tPGHt~--g~~~~~~~~~~~~~~~~~~lftG 148 (474)
T 3tp9_A 85 GPPEWKSEY--------------VKAYPHRLLKDGDELHFGNVRIVVMHTPGHTP--EHVSYLLYDGKTSPDVPMALFSG 148 (474)
T ss_dssp SCGGGCCGG--------------GGGSSEEEECTTCEEEETTEEEEEEECCSSSS--SCEEEEEEETTTEEEEEEEEEEE
T ss_pred chhhhcccc--------------cccccceECCCCCEEEECCEEEEEEECCCCCC--CCEEEEEecCCCCCCCceEEEeC
Confidence 643322110 00111 2233678999999999988887 777 67777774 499999
Q ss_pred CCCC
Q 023686 186 DVSE 189 (278)
Q Consensus 186 D~~~ 189 (278)
|+-.
T Consensus 149 D~lf 152 (474)
T 3tp9_A 149 DFVF 152 (474)
T ss_dssp TSEE
T ss_pred Cccc
Confidence 9853
No 66
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=99.52 E-value=1.8e-14 Score=130.95 Aligned_cols=129 Identities=21% Similarity=0.217 Sum_probs=92.6
Q ss_pred cccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
..+++|++|..+ .+++++|||||... ..+.+.+++.+. +|++|++||.|.||++|+..+.+.+ +++||+++
T Consensus 34 ~~~~nsyli~~~--~~~~~vlID~g~~~-~~~~~~l~~~g~-~i~~Il~TH~H~DH~gg~~~l~~~~-----~a~v~~~~ 104 (466)
T 3r2u_A 34 HLSQASYLIGCQ--KTGEAMIIDPIRDL-SSYIRVADEEGL-TITHAAETHIHADFASGIRDVAIKL-----NANIYVSG 104 (466)
T ss_dssp TTTEEEEEEEET--TTCEEEEESCCSCC-HHHHHHHHHHTC-EEEEEECSSCCSSSCCCHHHHHHHH-----CCEEEEEC
T ss_pred CccceEEEEEeC--CCCEEEEEcCCCCH-HHHHHHHHHCCC-eeeEEEECCCChhhhccHHHHHHhh-----CCeEEECc
Confidence 357788999532 46789999999764 334445555665 7999999999999999999998875 57899998
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEec-CCCCceeeEEEEc--c-------EEEec
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVW-HGAGYRSLGFRFG--N-------ICYIS 185 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~-H~~~~~~~g~~i~--~-------v~~~g 185 (278)
.....+.. . ..........+++.+++++.+++++.++ |++ .+++|.+. + ++|+|
T Consensus 105 ~~~~~~~~--------~------~~~~~~~~~~~g~~l~~g~~~l~vi~tPGHT~--g~~~~~~~~~~~~~~~~~~lftG 168 (466)
T 3r2u_A 105 ESDDTLGY--------K------NMPNHTHFVQHNDDIYVGNIKLKVLHTPGHTP--ESISFLLTDEGAGAQVPMGLFSG 168 (466)
T ss_dssp CSCTTTSC--------C------SCCTTCEEECTTCEEEETTEEEEEEECCSSST--TCEEEEEECGGGTCCSCCEEEEE
T ss_pred chhhhhcc--------c------cCCCCCEEeCCCCEEEECCEEEEEEECCCCCC--CCEEEEEcCCCccCCCceEEEEC
Confidence 64322110 0 0001112333778999999999999887 777 67777776 2 99999
Q ss_pred CCCC
Q 023686 186 DVSE 189 (278)
Q Consensus 186 D~~~ 189 (278)
|+-.
T Consensus 169 D~lf 172 (466)
T 3r2u_A 169 DFIF 172 (466)
T ss_dssp TTBC
T ss_pred Cccc
Confidence 9854
No 67
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=99.48 E-value=2.3e-13 Score=128.25 Aligned_cols=191 Identities=17% Similarity=0.135 Sum_probs=109.5
Q ss_pred cceeEEEEccCCCCCceEEEecCcch--HHHHhhhCCc-CCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEec
Q 023686 38 LNTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVA 114 (278)
Q Consensus 38 ~~~s~li~~~~~~~~~~iLiD~G~~~--~~~~~~~l~~-~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~ 114 (278)
..++++|+ +++..+|||+|.+. ...+.+.+++ .+..+|++|++||.|.||++|+..+.+......++++||++
T Consensus 122 ~~N~ylI~----~~~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~~~~a~V~a~ 197 (658)
T 2cfu_A 122 LANITFIR----GDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVASGAVQIIAP 197 (658)
T ss_dssp SSCEEEEE----CSSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHHTTSSEEEEE
T ss_pred CeEEEEEE----ECCEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhccCCCCEEEEc
Confidence 46788888 56789999999864 2233333332 44578999999999999999999886521000146899999
Q ss_pred cccHHHHHhcc-----------cccccccccc---------------CC-CCccceeeeec-cCCceeecceEEEEEEec
Q 023686 115 MRDFEVMKKTH-----------YYLVDTSGII---------------PG-AAVSELQFNII-DEEPFTVQDLKITPLPVW 166 (278)
Q Consensus 115 ~~~~~~l~~~~-----------~~~~~~~~~~---------------~~-~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~ 166 (278)
+...+.+.... .+........ .+ .........+. +++.+.++|.+++++.++
T Consensus 198 ~~~~~~~~~e~~~~g~~~~~r~~~~~g~~lp~~~~~~v~~~l~~~~~~g~~~~~~p~~~~~~dG~~l~lgg~~l~vi~tP 277 (658)
T 2cfu_A 198 AGFMEAAIKENVLAGNAMMRRATYQYGTQLPKGPQGQVDMAIGKGLARGPLSLLAPTRLIEGEGEDLVLDGVPFTFQNTP 277 (658)
T ss_dssp TTHHHHHC---CTTHHHHHHHHHHHTTTTSCBSTTSBCCCSSSSCCCCSCCCCCCCSEEECTTEEEEEETTEEEEEEECT
T ss_pred hhHHHHHhhhhhhhhhHHHHHHHHHhccCCChhhhhhhhhcccccccCCCccCCCCcEEEecCceEEEECCEEEEEEeCC
Confidence 98765542100 0000000000 00 00011122232 567889999888887766
Q ss_pred -C-CCCceeeEEEEc--cEEEecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHh---CCCeEEEE
Q 023686 167 -H-GAGYRSLGFRFG--NICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKI---QPKRTLFI 239 (278)
Q Consensus 167 -H-~~~~~~~g~~i~--~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l---~~~~~v~~ 239 (278)
| ++ .+++|.+. +++|+||...... ..+ . ..... .......+.+.++.++++ .++.+++.
T Consensus 278 GHhTp--g~i~~~~p~~~vLftGD~v~~~~---~~i---~-----~~~g~-~~~d~~~~~~sL~~l~~l~~l~~~~v~PG 343 (658)
T 2cfu_A 278 GTESP--AEMNIWLPRQKALLMAENVVGTL---HNL---Y-----TLRGA-EVRDALGWSKYINQALHRFGRQAEVMFAV 343 (658)
T ss_dssp TSSSS--SBEEEEETTTTEEECTTTSCSSC---CCS---S-----CTTCC-CCCCHHHHHHHHHHHHHHTGGGCSEEECS
T ss_pred CCCCC--CcEEEEECCCCEEEEeccccccC---Ccc---c-----cCCCc-ccCCHHHHHHHHHHHHHHhCCCCcEEEeC
Confidence 5 66 56777775 8999999764211 000 0 00000 000011234455656555 78888888
Q ss_pred eeccCCC
Q 023686 240 GMMHLMD 246 (278)
Q Consensus 240 h~~~~~~ 246 (278)
|+....+
T Consensus 344 Hg~p~~g 350 (658)
T 2cfu_A 344 HNWPRWG 350 (658)
T ss_dssp SSCCEES
T ss_pred CCCccCC
Confidence 9765543
No 68
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=99.46 E-value=2.5e-13 Score=109.70 Aligned_cols=164 Identities=13% Similarity=0.090 Sum_probs=102.2
Q ss_pred cccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
..+.+|++|+ ++++.+|||+|... ..+.+.+++.+ +|++|++||. ||++|+..+.+.+ +++||+++
T Consensus 21 ~~~~n~~li~----~~~~~iliD~g~~~-~~~~~~l~~~g--~i~~ii~TH~--DH~gg~~~~~~~~-----~a~v~~~~ 86 (201)
T 2p97_A 21 NIDFNGFAWI----RPEGNILIDPVALS-NHDWKHLESLG--GVVWIVLTNS--DHVRSAKEIADQT-----YTKIAGPV 86 (201)
T ss_dssp TEEEEEEEEC----CTTCCEEESCCCCC-HHHHHHHHHTT--CCSEEECSSG--GGCTTHHHHHHHS-----CCEEEEEG
T ss_pred CcceeEEEEE----eCCeeEEEECCCCc-HHHHHHHHhcC--CCCEEEECCc--hhhhhHHHHHHhc-----CCEEEEcH
Confidence 4568899998 45789999999532 23444455555 8999999999 9999999998764 47899998
Q ss_pred ccHHHHHhccccccccccccCCCCccceeeeeccCCceeecceEEEEEEecCCCCceeeEEEEc-cEEEecCCCCCCcch
Q 023686 116 RDFEVMKKTHYYLVDTSGIIPGAAVSELQFNIIDEEPFTVQDLKITPLPVWHGAGYRSLGFRFG-NICYISDVSEIPEET 194 (278)
Q Consensus 116 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~H~~~~~~~g~~i~-~v~~~gD~~~~~~~~ 194 (278)
...+.+... . .....+++.+. +++++...|..|++ .+++|.+. +++|+||+......
T Consensus 87 ~~~~~~~~~--------------~----~~~~~~g~~~~-~~~~~~~~p~gHt~--g~~~~~~~~~~lf~GD~~~~~~~- 144 (201)
T 2p97_A 87 AEKENFPIY--------------C----DRWLSDGDELV-PGLKVMELQGSKTP--GELALLLEETTLITGDLVRAYRA- 144 (201)
T ss_dssp GGTTSCSSC--------------C----SEEECTTCBSS-TTEEEEEECSSSST--TEEEEEETTTEEEECSSEEBSST-
T ss_pred hHhhhhccc--------------C----ceecCCCCEEc-ceEEEEECCCCCCC--CcEEEEEcCCEEEECccccccCC-
Confidence 764432210 0 11122445443 26677766656988 67788887 79999998543210
Q ss_pred hhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHH-hCCCeEEEEeeccCC
Q 023686 195 YPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRK-IQPKRTLFIGMMHLM 245 (278)
Q Consensus 195 ~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~-l~~~~~v~~h~~~~~ 245 (278)
..+.+....+ ...-..+.+.++.+++ .+++.+++.|.....
T Consensus 145 ------g~~~~~~~~~----~~~~~~~~~sl~~l~~l~~~~~v~pgHg~~~~ 186 (201)
T 2p97_A 145 ------GGLEILPDEK----LMNKQKVVASVRRLAALEKVEAVLVGDGWSVF 186 (201)
T ss_dssp ------TSCEECCGGG----CSCHHHHHHHHHHHHTCTTCCEEEESBBCCBC
T ss_pred ------CccccCCccc----cCCHHHHHHHHHHHHhcCCCCEEEeCCCccee
Confidence 0111110000 0011122345556666 578888898985543
No 69
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=99.41 E-value=2.9e-13 Score=117.70 Aligned_cols=144 Identities=17% Similarity=0.231 Sum_probs=84.9
Q ss_pred cccceeEEEEccCCCCCceEEEecCcch-----HHHHhhhCCcCC--CCCcCEEEeecCChhhhCChHHHHhhhccCCCC
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKFF-----YHSALRWFPAYG--IRTIDAVIITHSHADAIGGLDDLRDWTNNVQRH 108 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~~-----~~~~~~~l~~~~--~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~ 108 (278)
....+|++|+ .+++.||||+|.+. ...+.+.|++.+ +.+||+|++||.|.||++|+..+... ..++
T Consensus 94 ~~~~n~~LI~----~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~~~---~fp~ 166 (331)
T 1p9e_A 94 ETSVTGYLVN----TGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGEQL---AFPN 166 (331)
T ss_dssp EEEEEEEEEE----CSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETTEE---SSTT
T ss_pred EEEEEEEEEE----ECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccccc---cCCC
Confidence 3456799998 56789999999762 122344444545 45899999999999999999843211 1257
Q ss_pred ccEEeccccHHHHHhccccc-ccc---ccccCC--CCcc----ceeeeecc-CCceeecceEEEEEEecCCCCceeeEEE
Q 023686 109 IPIYVAMRDFEVMKKTHYYL-VDT---SGIIPG--AAVS----ELQFNIID-EEPFTVQDLKITPLPVWHGAGYRSLGFR 177 (278)
Q Consensus 109 ~~v~~~~~~~~~l~~~~~~~-~~~---~~~~~~--~~~~----~~~~~~~~-~~~~~~g~~~i~~~~~~H~~~~~~~g~~ 177 (278)
.+||+++...+.+....... ... ...... ..+. ..++..++ ++.+. .++++...| .|++ .+++|.
T Consensus 167 a~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~-~gi~vi~tp-GHtp--G~~~~~ 242 (331)
T 1p9e_A 167 AVVRADQKEADFWLSQTNLDKAPDDESKGFFKGAMASLNPYVKAGKFKPFSGNTDLV-PGIKALASH-GHTP--GHTTYV 242 (331)
T ss_dssp CEEECBHHHHHHHSCHHHHTTCSSTTSCHHHHHHHHHHHHHHHTTCBCCBCSSEECS-TTEEEEECT-TSST--TCEEEE
T ss_pred CEEEECHHHHHHHhCchhhccCchhhhhHHHHHHHHHhhhhcccCceEEeCCCCEEc-ccEEEEEcC-CCCh--hCEEEE
Confidence 89999998877654321000 000 000000 0000 11223333 33333 245555444 3887 567777
Q ss_pred Ec----cEEEecCCCCC
Q 023686 178 FG----NICYISDVSEI 190 (278)
Q Consensus 178 i~----~v~~~gD~~~~ 190 (278)
++ +++|+||+...
T Consensus 243 i~~~~~~vlf~GD~~~~ 259 (331)
T 1p9e_A 243 VESQGQKLALLGDLILV 259 (331)
T ss_dssp EEETTEEEEECTTSCCC
T ss_pred EEECCcEEEEEECccCc
Confidence 74 89999998764
No 70
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=99.39 E-value=2.2e-12 Score=108.06 Aligned_cols=65 Identities=29% Similarity=0.378 Sum_probs=49.7
Q ss_pred cccceeEEEEccCCCCCceEEEecCcchHHHHhhhCCcCCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 36 RRLNTSILIRYPGPSGRRNILIDAGKFFYHSALRWFPAYGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 36 ~~~~~s~li~~~~~~~~~~iLiD~G~~~~~~~~~~l~~~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
...+.|++|+ . +|||+|.+. .+.+++++.++..-|+|++||.|+||++|+..+ ++++||+++
T Consensus 29 ~~~G~s~lie----~----iLiD~G~~~--~l~~~l~~~gi~~~~~IvlTH~H~DH~ggl~~l--------~~~~v~~~~ 90 (267)
T 3h3e_A 29 SEHGFSVLVD----S----VLFDTGKSD--VFLKNARKLGIDLPKDVLISHGHYDHAGGLLYL--------SGKRVWLRK 90 (267)
T ss_dssp CCSSCEEEET----T----EEECCCSSS--HHHHHHHHTTCCCCSEEECSCSCHHHHGGGGGC--------CSCEEEEEG
T ss_pred eCcEeHHeee----e----EEEECCCcH--HHHHHHHHCCcCcCCEEEECCCChhhhCCHHHh--------cCCEEEECH
Confidence 3456789998 2 999999874 355555566652229999999999999999987 367899988
Q ss_pred ccH
Q 023686 116 RDF 118 (278)
Q Consensus 116 ~~~ 118 (278)
...
T Consensus 91 ~~~ 93 (267)
T 3h3e_A 91 EAL 93 (267)
T ss_dssp GGG
T ss_pred HHH
Confidence 654
No 71
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=98.98 E-value=1.7e-13 Score=128.66 Aligned_cols=189 Identities=14% Similarity=0.117 Sum_probs=106.7
Q ss_pred ceeEEEEccCCCCCceEEEecCcch--HHHHhhhCCc-CCCCCcCEEEeecCChhhhCChHHHHhhhccCCCCccEEecc
Q 023686 39 NTSILIRYPGPSGRRNILIDAGKFF--YHSALRWFPA-YGIRTIDAVIITHSHADAIGGLDDLRDWTNNVQRHIPIYVAM 115 (278)
Q Consensus 39 ~~s~li~~~~~~~~~~iLiD~G~~~--~~~~~~~l~~-~~~~~Id~v~iTH~H~DH~~gl~~l~~~~~~~~~~~~v~~~~ 115 (278)
.+|++|. +++..+|||+|.+. ...+.+.+++ .+..+|++||+||.|.||++|+..+.+......++++||+++
T Consensus 133 ~N~~lI~----~~~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~~~~~~~a~I~a~~ 208 (668)
T 2yhe_A 133 ANMTIIE----GDSGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEADVKAGKVKVFAPS 208 (668)
Confidence 5678887 45789999999863 2345555544 245789999999999999999999876311111467899998
Q ss_pred ccHHHH--Hh---------cccccccccc-----------ccC-----C-CCccceeeeec-cCCceeecceEEEEEEec
Q 023686 116 RDFEVM--KK---------THYYLVDTSG-----------IIP-----G-AAVSELQFNII-DEEPFTVQDLKITPLPVW 166 (278)
Q Consensus 116 ~~~~~l--~~---------~~~~~~~~~~-----------~~~-----~-~~~~~~~~~~~-~~~~~~~g~~~i~~~~~~ 166 (278)
...+.. .+ ...+.+.... ... + ......+..+. +++.+.+++.+++++.++
T Consensus 209 ~~~e~~~~e~~~~g~~~~~r~~~~~G~~lp~~~~~~~~~~l~~~~~~~~~~~~~~P~~~~~~dg~~l~lgg~~l~vi~tP 288 (668)
T 2yhe_A 209 GFMEHAVSENILAGTAMARRGQYQSGVMVPRGAQAQVDSGLFKTTATNATNTLVAPNVLIEKPYERHTVDGVELEFQLTL 288 (668)
Confidence 753221 11 0000000000 000 0 00011122334 567889999888777666
Q ss_pred --CCCCceeeEEEEc--cEEEecCCCCCCcchhhcccCCCEEEE-cCcCCCCCCCCCCCHHHHHHHHHHh---CCCeEEE
Q 023686 167 --HGAGYRSLGFRFG--NICYISDVSEIPEETYPFLQDCEILIM-DALRPDRSSSTHFGLPRALEEVRKI---QPKRTLF 238 (278)
Q Consensus 167 --H~~~~~~~g~~i~--~v~~~gD~~~~~~~~~~~~~~~dili~-e~~~~~~~~~~H~~~~~~~~~~~~l---~~~~~v~ 238 (278)
|++ .++.+.+. +++|+||... .. .. .+... ..... .-..+.+.++.++++ +++.+++
T Consensus 289 G~Htp--g~i~~~~p~~~vLftGD~~~-~~-~~------ni~~~~g~~~~-----d~~~w~~SL~~l~~l~~~~~~~vvP 353 (668)
T 2yhe_A 289 GSEAP--SDMNIYLPQFKVLNTADNAP-PA-MH------NLLTPRGAEVR-----DAKAWAGYIDASLEKYGDRTDVLIQ 353 (668)
Confidence 777 45555554 8999999743 11 10 01000 00000 011234446666665 6778888
Q ss_pred EeeccCCC
Q 023686 239 IGMMHLMD 246 (278)
Q Consensus 239 ~h~~~~~~ 246 (278)
.|.....+
T Consensus 354 GHg~p~~g 361 (668)
T 2yhe_A 354 QHNWPVWG 361 (668)
Confidence 88755533
No 72
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=91.37 E-value=0.35 Score=44.52 Aligned_cols=59 Identities=12% Similarity=-0.054 Sum_probs=46.9
Q ss_pred CCCCCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhCCC---ceEEeecCeEEeec
Q 023686 214 SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGL---DVQLSYDGLRVPVM 277 (278)
Q Consensus 214 ~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~---~v~~~~dg~~i~~~ 277 (278)
.-.+|.+.+++.++++.++|+.++++|+... ....+.+++++.|+ ++.++..|..+++.
T Consensus 379 ~~SgHa~~~eL~~~i~~~~Pk~vipvHGe~~-----~~~~~~~~~~~~g~~~~~~~~~~~G~~~~l~ 440 (562)
T 3bk2_A 379 HASGHASQEELKLILNLTTPRFFLPWHGEVR-----HQMNFKWLAESMSRPPEKTLIGENGAVYRLT 440 (562)
T ss_dssp CCCSSCCHHHHHHHHHHHCCSEEEEESBCHH-----HHHHHHHHHHTSSSCCSEECCCCTTEEEEEC
T ss_pred EEeCCCCHHHHHHHHHhcCCCEEEEEcCCHH-----HHHHHHHHHHHcCCCcceEEECCCCCEEEEe
Confidence 4578999999999999999999999996643 23344566666776 68889999998874
No 73
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=89.52 E-value=0.36 Score=44.33 Aligned_cols=59 Identities=20% Similarity=0.154 Sum_probs=46.5
Q ss_pred CCCCCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhCCC---ceEEeecCeEEeec
Q 023686 214 SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGL---DVQLSYDGLRVPVM 277 (278)
Q Consensus 214 ~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~---~v~~~~dg~~i~~~ 277 (278)
-..+|.+.+++..+++.++|+.++++|+... ......+++++.|+ ++.++..|..+++.
T Consensus 364 h~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~-----~~~~~~~~a~~~G~~~~~~~~~~nG~~~~l~ 425 (555)
T 3zq4_A 364 HTSGHGGQEEQKLMLRLIKPKFFMPIHGEYR-----MQKMHVKLATDCGIPEENCFIMDNGEVLALK 425 (555)
T ss_dssp CCCSSCCHHHHHHHHHHSCEEEEEEESBCHH-----HHHHHHHHHHHTTCCGGGBCCCCTTCEEEEE
T ss_pred EEeCCCCHHHHHHHHHHhCCCEEEEcCCCHH-----HHHHHHHHHHHcCCCcccEEEccCCCEEEEe
Confidence 3478999999999999999999999997643 23344556677776 68888999988773
No 74
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=87.48 E-value=0.89 Score=42.50 Aligned_cols=57 Identities=16% Similarity=0.103 Sum_probs=46.0
Q ss_pred CCCCCCHHHHHHHHHHhC--CCeEEEEeeccCCChhhHHHHHHHhh-hhCCCceEEeecCeEEee
Q 023686 215 SSTHFGLPRALEEVRKIQ--PKRTLFIGMMHLMDHEKVNEELLKLM-ETEGLDVQLSYDGLRVPV 276 (278)
Q Consensus 215 ~~~H~~~~~~~~~~~~l~--~~~~v~~h~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~dg~~i~~ 276 (278)
-.+|.+..++.++++.++ |++++++|+... ....+++.+ ++.|.++.++..|..+.+
T Consensus 580 ~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~-----~~~~~a~~~~~~~g~~~~~p~~g~~~~l 639 (640)
T 2xr1_A 580 FSGHSDRRQLMEYVKRMQPRPERVFTEHGDEK-----ACVDLASSVYKKLKIETRALTNLETVRL 639 (640)
T ss_dssp CSCSCCHHHHHHHHHTCBSCCSEEEEESSCHH-----HHHHHHHHHHHHHCCEEEECCTTCEEEC
T ss_pred ccccCCHHHHHHHHHHhccCCCEEEEECCCHH-----HHHHHHHHHHHHcCCeEEeCCCCCEEEe
Confidence 568999999999999998 999999996542 234455666 456889999999999876
No 75
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=86.97 E-value=0.83 Score=42.66 Aligned_cols=57 Identities=18% Similarity=0.191 Sum_probs=45.4
Q ss_pred CCCCCCHHHHHHHHHHhC--CCeEEEEeeccCCChhhHHHHHHHhh-hhCCCceEEeecCeEEee
Q 023686 215 SSTHFGLPRALEEVRKIQ--PKRTLFIGMMHLMDHEKVNEELLKLM-ETEGLDVQLSYDGLRVPV 276 (278)
Q Consensus 215 ~~~H~~~~~~~~~~~~l~--~~~~v~~h~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~dg~~i~~ 276 (278)
-.+|.+..++.++++.++ |++++++|+... ....+++.+ ++.|.++.++..|..+++
T Consensus 576 ~SgHad~~eL~~~i~~~~~~Pk~vi~vHGe~~-----~~~~~a~~~~~~~g~~~~~p~~g~~~~l 635 (636)
T 2ycb_A 576 FSGHSDRRQLMEYVKRISPKPEKILLCHGDNY-----KTLDLASSIYRTYRIETKTPLNLETVRI 635 (636)
T ss_dssp CCSSCCHHHHHHHHHSCSSCCSEEEEESSCHH-----HHHHHHHHHHHHHCCEEECCCTTCEEEC
T ss_pred cceeCCHHHHHHHHHHhccCCCEEEEECCCHH-----HHHHHHHHHHHHcCCcEEeCCCCCEEEe
Confidence 568999999999999998 999999996543 233455555 456889999999999876
No 76
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=86.80 E-value=0.93 Score=42.45 Aligned_cols=57 Identities=14% Similarity=0.119 Sum_probs=45.1
Q ss_pred CCCCCCHHHHHHHHHHhC--CCeEEEEeeccCCChhhHHHHHHHhh-hhCCCceEEeecCeEEee
Q 023686 215 SSTHFGLPRALEEVRKIQ--PKRTLFIGMMHLMDHEKVNEELLKLM-ETEGLDVQLSYDGLRVPV 276 (278)
Q Consensus 215 ~~~H~~~~~~~~~~~~l~--~~~~v~~h~~~~~~~~~~~~~~~~~~-~~~g~~v~~~~dg~~i~~ 276 (278)
-.+|.+..++.++++.++ |++++++|+... ....+++.+ ++.|.++.++..|..+++
T Consensus 591 ~SgHad~~eL~~~i~~~~~~P~~vi~vHGe~~-----~~~~la~~~~~~~g~~~~~p~~g~~~~l 650 (651)
T 3af5_A 591 FSGHADRRELMNYVAKVRPRPERIITVHGEPQ-----KCLDLATSIHRKFGISTRAPNNLDTIRL 650 (651)
T ss_dssp GCSSCCHHHHHHHHHHCBSCCSEEEEESSCHH-----HHHHHHHHHHHHHCCEEECCCTTCEEEC
T ss_pred ccCcCCHHHHHHHHHHhhcCCCEEEEEcCCHH-----HHHHHHHHHHHhcCCeEEECCCCCEEEe
Confidence 468999999999999998 999999996542 233445555 445789999999999875
No 77
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=85.47 E-value=0.72 Score=40.63 Aligned_cols=52 Identities=15% Similarity=0.035 Sum_probs=41.0
Q ss_pred CCCCCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEEee
Q 023686 214 SSSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 276 (278)
Q Consensus 214 ~~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i~~ 276 (278)
.-.+|.+.+++.++++.++|+.++++|+...... +..+.++.++..|..+++
T Consensus 378 ~~SgHa~~~eL~~~~~~~~Pk~~ipvHGe~~~~~-----------~~~~~~~~~~~~g~~~~l 429 (429)
T 2az4_A 378 ACSGHAIPEDLDKIIALIEPQVLVPIHTLKPEKL-----------ENPYGERILPERGEQIVL 429 (429)
T ss_dssp CCCSSCCHHHHHHHHHHHCCSEEEEESCSCGGGC-----------CCTTSEECCCCTTCEEEC
T ss_pred eecCCCCHHHHHHHHHhhCCCEEEECCCCchhhh-----------hcCCCcEEEeCCCcEEeC
Confidence 3578999999999999999999999998654221 133457888999998874
No 78
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=84.37 E-value=1.7 Score=38.64 Aligned_cols=62 Identities=15% Similarity=0.193 Sum_probs=43.0
Q ss_pred CCCCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhh---CCCceEEeecCeEEeec
Q 023686 215 SSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMET---EGLDVQLSYDGLRVPVM 277 (278)
Q Consensus 215 ~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~---~g~~v~~~~dg~~i~~~ 277 (278)
-.+|....+++++++.++|++++++|+..... ....+.+++.+.. .+.++.++.-|.++++.
T Consensus 393 ~S~Had~~~l~~~i~~~~p~~v~~vHGe~~~~-~~~~~~l~~~~~~~~~~~~~~~~p~~~~~~~~~ 457 (459)
T 2i7t_A 393 FSAHTDYQQTSEFIRALKPPHVILVHGEQNEM-ARLKAALIREYEDNDEVHIEVHNPRNTEAVTLN 457 (459)
T ss_dssp CSCCCCHHHHHHHHHHHCCSEEEEESSCHHHH-HHHHHHHHHHHSSCTTCCCEEECCCTTCCEEEE
T ss_pred ecccCCHHHHHHHHHhcCCCeEEEeCCCHHHH-HHHHHHHHHHhccccccCceEEeCCCCCEEEEE
Confidence 47899999999999999999999999654321 1112223232211 14789999999988764
No 79
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=71.34 E-value=5.7 Score=34.98 Aligned_cols=55 Identities=27% Similarity=0.256 Sum_probs=41.1
Q ss_pred CCCCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEEee
Q 023686 215 SSTHFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPV 276 (278)
Q Consensus 215 ~~~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i~~ 276 (278)
-.+|....+++++++.++ +++++|+.. ...+.+++..++.+.++.++.-|+++++
T Consensus 377 ~saHad~~~l~~~~~~~~--~v~lvHge~-----~~~~~l~~~l~~~~~~~~~p~~~~~~~~ 431 (431)
T 3iek_A 377 FSGHAGQDELLDWLQGEP--RVVLVHGEE-----EKLLALGKLLALRGQEVSLARFGEGVPV 431 (431)
T ss_dssp GCSSCCHHHHHHHHTTCS--EEEEESSCH-----HHHHHHHHHHHHTTCEEEECCTTCCEEC
T ss_pred ccccCCHHHHHHHHHhCC--eEEEECCCH-----HHHHHHHHHHHHhCCcEEECCCCCEEeC
Confidence 467999999999999775 889999653 2244555555554558999999988874
No 80
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=54.76 E-value=17 Score=31.22 Aligned_cols=28 Identities=14% Similarity=0.071 Sum_probs=25.4
Q ss_pred CCCCCCCHHHHHHHHHHhCCCeEEEEee
Q 023686 214 SSSTHFGLPRALEEVRKIQPKRTLFIGM 241 (278)
Q Consensus 214 ~~~~H~~~~~~~~~~~~l~~~~~v~~h~ 241 (278)
+-..|+++.|+.++++.++|++++++|-
T Consensus 317 pySeHss~~EL~~fv~~l~p~~iiptv~ 344 (367)
T 4b87_A 317 PYSEHSSYLEMKRFVQWLKPQKIIPTVN 344 (367)
T ss_dssp CCCSSCCHHHHHHHHHHHCCSEEEECSS
T ss_pred eccCCCCHHHHHHHHHhcCCCeEECeec
Confidence 4567999999999999999999999983
No 81
>1qys_A TOP7; alpha-beta, novel fold, de novo protein; 2.50A {Computationally designed sequence} SCOP: k.41.1.1
Probab=53.19 E-value=42 Score=21.53 Aligned_cols=56 Identities=23% Similarity=0.323 Sum_probs=35.3
Q ss_pred HHHHHHHHHhCCCeEEEEeeccCCC-hhhHHHHHHHhhhhCCC-ceEEeecCeEEeec
Q 023686 222 PRALEEVRKIQPKRTLFIGMMHLMD-HEKVNEELLKLMETEGL-DVQLSYDGLRVPVM 277 (278)
Q Consensus 222 ~~~~~~~~~l~~~~~v~~h~~~~~~-~~~~~~~~~~~~~~~g~-~v~~~~dg~~i~~~ 277 (278)
.+++..+++..++++-++-...... .+....-+.+.+.+.|. .+.+.+||.++.++
T Consensus 34 nelmdyikkqgakrvrisitartkkeaekfaailikvfaelgyndinvtfdgdtvtve 91 (106)
T 1qys_A 34 NELMDYIKKQGAKRVRISITARTKKEAEKFAAILIKVFAELGYNDINVTFDGDTVTVE 91 (106)
T ss_dssp HHHHHHHHHHCCSEEEEEEECSSHHHHHHHHHHHHHHHHHTTCCEEEEEEETTEEEEE
T ss_pred HHHHHHHHhcCCcEEEEEEEecchhHHHHHHHHHHHHHHHhCCcceeEEEcCCeEEEE
Confidence 3567777888888886654333222 22223345666677664 68889999888764
No 82
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=42.91 E-value=16 Score=30.93 Aligned_cols=33 Identities=15% Similarity=0.004 Sum_probs=28.9
Q ss_pred CCCCCCCHHHHHHHHHHhCCCeEEEEe-eccCCC
Q 023686 214 SSSTHFGLPRALEEVRKIQPKRTLFIG-MMHLMD 246 (278)
Q Consensus 214 ~~~~H~~~~~~~~~~~~l~~~~~v~~h-~~~~~~ 246 (278)
...+|.+.+|+.++++-++|+.++++| +++...
T Consensus 273 h~S~Ha~~~EL~~~~~~~~P~~~iPvh~ge~~~~ 306 (336)
T 3zdk_A 273 PYSDHSSYSELRAFVAALKPCQVVPIVSRRPCGG 306 (336)
T ss_dssp CCCSSCBHHHHHHHHHHHCCSCEEESCTTSCCCS
T ss_pred EecCCCCHHHHHHHHHHhCCCEEEEEECCcCchH
Confidence 357899999999999999999999999 776644
No 83
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=42.03 E-value=80 Score=25.64 Aligned_cols=50 Identities=8% Similarity=0.033 Sum_probs=33.1
Q ss_pred HHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEEeec
Q 023686 221 LPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVM 277 (278)
Q Consensus 221 ~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i~~~ 277 (278)
++++++.++++++++++++|..... ...++.++++-++..+++|++++++
T Consensus 217 l~~tl~~l~~~~~~~i~~~HCTg~~-------a~~~L~~~lp~~v~~~~~G~~iei~ 266 (267)
T 3h3e_A 217 IEKIVKAFNELGVETVVPCHCTGER-------AVDIFKREFLGKIMDCYAGLKLEVS 266 (267)
T ss_dssp HHHHHHHHHHTTCCEEEEETTSCHH-------HHHHHHHHCSSEECCCCTTCEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEECCCCHH-------HHHHHHHHCCCCEEEecCceEEEeC
Confidence 4456677777777777777755422 2223344456688899999999874
No 84
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=40.59 E-value=13 Score=28.92 Aligned_cols=26 Identities=19% Similarity=0.135 Sum_probs=20.6
Q ss_pred CCceEEEecCcchHHHHhhhCCcCCC
Q 023686 51 GRRNILIDAGKFFYHSALRWFPAYGI 76 (278)
Q Consensus 51 ~~~~iLiD~G~~~~~~~~~~l~~~~~ 76 (278)
+++.++||.|.+...++.+.|+..|.
T Consensus 2 ~~~I~iiD~g~~n~~si~~al~~~G~ 27 (211)
T 4gud_A 2 TQNVVIIDTGCANISSVKFAIERLGY 27 (211)
T ss_dssp -CCEEEECCCCTTHHHHHHHHHHTTC
T ss_pred CCEEEEEECCCChHHHHHHHHHHCCC
Confidence 35789999999877778888877775
No 85
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=26.49 E-value=25 Score=20.30 Aligned_cols=14 Identities=29% Similarity=0.833 Sum_probs=10.6
Q ss_pred CCCCCCCccccccc
Q 023686 16 TNPSKKCPVCTKAV 29 (278)
Q Consensus 16 ~~~~~~~~~c~~~~ 29 (278)
.+|+-+|++|+=-+
T Consensus 20 ~lP~IrCpyCGyri 33 (48)
T 4ayb_P 20 VLPGVRCPYCGYKI 33 (48)
T ss_dssp CCSSSCCTTTCCSC
T ss_pred hCCCcccCccCcEE
Confidence 37888999997543
No 86
>2ppv_A Uncharacterized protein; putative phosphotransferase, structural genomics, joint CENT structural genomics, JCSG; 2.00A {Staphylococcus epidermidis}
Probab=25.43 E-value=49 Score=27.97 Aligned_cols=63 Identities=8% Similarity=0.080 Sum_probs=38.3
Q ss_pred EccEEEecCCCCCCcchhhcccCCCEEEEcCcCCCCCCCCCCCHHHHHHHHHHhCCCeEEEEe
Q 023686 178 FGNICYISDVSEIPEETYPFLQDCEILIMDALRPDRSSSTHFGLPRALEEVRKIQPKRTLFIG 240 (278)
Q Consensus 178 i~~v~~~gD~~~~~~~~~~~~~~~dili~e~~~~~~~~~~H~~~~~~~~~~~~l~~~~~v~~h 240 (278)
+.++.|.++.....++..+.++++|+++..-.....+...+.-++++.+.+++.+++++++.-
T Consensus 155 i~~v~l~p~~~~~~p~~l~AI~~AD~IvlgPGS~~TSI~P~Llv~gi~~Ai~~s~A~kV~v~N 217 (332)
T 2ppv_A 155 IDRVFLEPSDVEPMNEAIEALEQADLIVLGPGSLYTSVISNLCVKGISEALLRTSAPKLYVSN 217 (332)
T ss_dssp EEEEEEESCCCCCCHHHHHHHHHCSEEEECSSCCCCCCHHHHTSHHHHHHHHHCCSCEEEECC
T ss_pred ceEEEEeCCCCCCCHHHHHHHHhCCEEEECCCCCHHHhcccccCchHHHHHHhCCCCEEEEcC
Confidence 346777765333344577788889988886654444444455555666666666666665543
No 87
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=23.94 E-value=90 Score=29.40 Aligned_cols=56 Identities=9% Similarity=0.023 Sum_probs=39.4
Q ss_pred CCCCHHHHHHHHHHhCCCeEEEEeeccCCChhhHHHHHHHhhhhCCCceEEeecCeEEeec
Q 023686 217 THFGLPRALEEVRKIQPKRTLFIGMMHLMDHEKVNEELLKLMETEGLDVQLSYDGLRVPVM 277 (278)
Q Consensus 217 ~H~~~~~~~~~~~~l~~~~~v~~h~~~~~~~~~~~~~~~~~~~~~g~~v~~~~dg~~i~~~ 277 (278)
+-..-..+..++..++|+++|++|...... +.+.+.++..+..|+.+.-|+.|+++
T Consensus 662 g~~D~rs~~~i~~~~~Prklilv~g~~~~~-----~~l~~~~~~~~~~v~~p~~~e~v~~~ 717 (717)
T 2i7x_A 662 SLVDQRSASIIWPSLKSRKIVLSAPKQIQN-----EEITAKLIKKNIEVVNMPLNKIVEFS 717 (717)
T ss_dssp CSCCHHHHHHHGGGSCCSEEEECSCGGGSC-----HHHHHHHHHTTCEEEECCSSCCEEEC
T ss_pred CCCcHHHHHHHHHhcCCcEEEEeCCCHHHH-----HHHHHHHHhcCCeEEeCCCCCeecCC
Confidence 334555667788899999999999764433 33444444546789999989888764
No 88
>3j21_V 50S ribosomal protein L24E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=23.17 E-value=98 Score=19.28 Aligned_cols=22 Identities=32% Similarity=0.717 Sum_probs=16.5
Q ss_pred CCCCCccccccccCCCCCcccceeEEEE
Q 023686 18 PSKKCPVCTKAVEPGNKNRRLNTSILIR 45 (278)
Q Consensus 18 ~~~~~~~c~~~~~~~~~~~~~~~s~li~ 45 (278)
..+.|.+|+..+.|| +--.+|+
T Consensus 3 ~~~~C~Fcg~~IyPG------~G~~~Vr 24 (66)
T 3j21_V 3 RWNVCSYCGKPFEPG------TGKMYVR 24 (66)
T ss_dssp CCCBCTTTCSBCCTT------CCEEEEC
T ss_pred ceeEecCcCCcccCC------CCeEEEe
Confidence 457899999999765 3356677
No 89
>2kak_A EC protein I/II; metallothionein, solution structure, wheat EC-1, Zn binding, metal-binding, metal-thiolate cluster, zinc; NMR {Triticum aestivum}
Probab=23.03 E-value=50 Score=19.37 Aligned_cols=22 Identities=32% Similarity=0.792 Sum_probs=16.7
Q ss_pred cccccCCCCCCCccccccccCC
Q 023686 11 RVSCLTNPSKKCPVCTKAVEPG 32 (278)
Q Consensus 11 ~~~~~~~~~~~~~~c~~~~~~~ 32 (278)
.-+|.--+++.|..|+.+..||
T Consensus 32 ka~C~CG~~C~CasC~~a~a~~ 53 (53)
T 2kak_A 32 RANCSCGAACNCASCGSATAPG 53 (53)
T ss_dssp CSCCCCCSSCCCHHHHCCSSCC
T ss_pred ccccccCCCccccccccccCCC
Confidence 4567667888999999888653
No 90
>1vq8_U 50S ribosomal protein L24E; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.39.1.6 PDB: 1giy_R 1jj2_T 1k73_V* 1k8a_V* 1k9m_V* 1kc8_V* 1kd1_V* 1kqs_T* 1m1k_V* 1m90_V* 1ml5_r* 1n8r_V* 1nji_V* 1q7y_V* 1q81_V* 1q82_V* 1q86_V* 1qvf_T 1qvg_T 1s72_U* ...
Probab=20.72 E-value=1.1e+02 Score=19.09 Aligned_cols=21 Identities=24% Similarity=0.877 Sum_probs=15.5
Q ss_pred CCCCccccccccCCCCCcccceeEEEE
Q 023686 19 SKKCPVCTKAVEPGNKNRRLNTSILIR 45 (278)
Q Consensus 19 ~~~~~~c~~~~~~~~~~~~~~~s~li~ 45 (278)
.+.|.+|+.-+.|| +--.+|+
T Consensus 3 ~~~C~Fcg~~IyPG------~G~~~Vr 23 (66)
T 1vq8_U 3 TRECDYCGTDIEPG------TGTMFVH 23 (66)
T ss_dssp -CBCTTTCCBCCSS------CCEEEEC
T ss_pred eeEecCcCCcccCC------CceEEEe
Confidence 57899999999865 3456677
Done!