BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 023687
(278 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P46209|USF_AQUPY Protein usf OS=Aquifex pyrophilus GN=usf PE=4 SV=1
Length = 231
Score = 100 bits (250), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 25/222 (11%)
Query: 66 APGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSG--- 121
PG++V+ EWWG++ + N + GF A PD Y GK + +A LM+
Sbjct: 25 GPGVIVIHEWWGLESPLSNIKEICDRFAQEGFVAFAPDFYEGKYADNPDDAGKLMTDMFE 84
Query: 122 --LDWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFY 175
+D A+ ASV++LK KKVGVTG+C GG L++ + P+ +DA V FY
Sbjct: 85 NRMDKVDAI--FKASVDFLKECRYTSPKKVGVTGFCCGGTLSMYFAGKFPDLIDASVPFY 142
Query: 176 GVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIYPGSAH 235
G+P D K P+ E D FV +V + +K+ +GV +V +Y G H
Sbjct: 143 GLPQITKIDAENIKVPIFFILAEKDEFVNNDEVID---IAKKVWKNGVDVKVKVYSGVTH 199
Query: 236 AFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYLS 277
AF+N ++R+++ +DP + AW+ ++ YL+
Sbjct: 200 AFLN------EKREDV----YDPCRAQDAWNLTVAFFKEYLT 231
>sp|Q7DFU6|YGHX_ECOLI Putative uncharacterized protein YghX OS=Escherichia coli (strain
K12) GN=yghX PE=5 SV=3
Length = 278
Score = 100 bits (248), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 109/215 (50%), Gaps = 22/215 (10%)
Query: 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGL--DTAEAQHLMSGLDW 124
P +VVV E G++ I++ A ++++ G+ AL PD G + + + L +D
Sbjct: 82 PAVVVVHENRGLNPYIEDVARRVAKA--GYIALAPDGLSSVGGYPGNDDKGRELQQQVDP 139
Query: 125 PGAVKDIHASVNWLKA--NGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPEL 182
+ D A++ +++ + KVG+TG+C GG ++ A++V PE+ V FYG P
Sbjct: 140 TNLMNDFFAAIEFMQRYPQATGKVGITGFCYGGGVSNAAAVAYPELACAVPFYGRQAPT- 198
Query: 183 ADPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIYPGSAHAFMNISP 242
AD + +AP+ HF ELD + + A E LKA+ YE +IYPG H F N
Sbjct: 199 ADVAKIEAPLLLHFAELDTRIN----EGWPAYEAALKANNKVYEAYIYPGVNHGFHN--- 251
Query: 243 DGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYLS 277
D R +D +A +LAW R W +YLS
Sbjct: 252 DSTPR--------YDKSAADLAWQRTLKWFDKYLS 278
>sp|O67802|DLHH_AQUAE Putative carboxymethylenebutenolidase OS=Aquifex aeolicus (strain
VF5) GN=aq_1997 PE=3 SV=1
Length = 231
Score = 89.0 bits (219), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 101/219 (46%), Gaps = 21/219 (9%)
Query: 67 PGIVVVQEWWGVDFEIKNHAVKISQL-NPGFKALIPDLYRGKVGLDTAEAQHLMSGL--- 122
P ++V EWWG++ + N +L + GF A PD Y+G+ + +A LM+ +
Sbjct: 26 PAVLVFHEWWGLESPLSNIKEICDKLADEGFVAFAPDFYKGQYADNPDDAGKLMTEMFEK 85
Query: 123 DWPGAVKDIHASVNWLKA---NGSKKVGVTGYCMGGALAIASSVLVPE-VDAVVSFYGVP 178
+ ASV ++K KKVG+TG+C GG LA+ + PE VDA + FYG+P
Sbjct: 86 RMDEVDRIFQASVEFVKECRYTYPKKVGITGFCCGGTLAMYFAAKFPEMVDASLPFYGLP 145
Query: 179 PPELADPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIYPGSAHAFM 238
+ K P+ E D FV +V + + + +GV +V ++ G HAF+
Sbjct: 146 QLTQINAENIKVPIFFILAEKDEFVNNDEVID---IAKTVWKNGVDVQVKVFSGVTHAFL 202
Query: 239 NISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYLS 277
N E D +DP AW ++ YL
Sbjct: 203 N----------EKREDVYDPKRACEAWELAVNFFKTYLK 231
>sp|P71505|DLHH_METEA Putative carboxymethylenebutenolidase OS=Methylobacterium
extorquens (strain ATCC 14718 / DSM 1338 / AM1)
GN=MexAM1_META1p1735 PE=3 SV=2
Length = 291
Score = 74.7 bits (182), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 130/297 (43%), Gaps = 45/297 (15%)
Query: 7 RILSRSTPLLKPSLARTHFPAGYRFAVRSMA-------DSAASPFKKIQIQRDDTTFDAY 59
R L+ T L + ++ T G+ AV+ +A D+ +++I D AY
Sbjct: 9 RSLAAQTTLSRRTVIATSLATGFALAVQPVAAQTTIATDANGLIAGEVKIPMQDGVIPAY 68
Query: 60 VVGKEDA---PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY--RGKVGLDTAE 114
+ P I+VVQE +GV IK+ ++++L G+ AL P+LY +G V T
Sbjct: 69 RAMPAEGGPFPTILVVQEIFGVHEHIKDVCRRLAKL--GYFALAPELYARQGDVSTLTNI 126
Query: 115 AQ---HLMSGLDWPGAVKDIHASVNWLKANG---SKKVGVTGYCMGGALAIASSVLVPEV 168
Q ++S + + D+ A+V + K G + ++G+TG+C GG + + P V
Sbjct: 127 QQIVSEVVSKVPDAQVMSDLDAAVAFAKGTGKADTARLGITGFCWGGRITWLYAAHNPAV 186
Query: 169 DAVVSFYG---------VPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLK 219
A V++YG +P + KAPV +G D + V T ++E +
Sbjct: 187 KAGVAWYGRLVGDSSALMPKNPVDVAADLKAPVLGLYGGADQGI---PVATIDRMKEACR 243
Query: 220 ASGVPYEVHIYPGSAHAF-MNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRY 275
A+G + +YP + HAF + P R E D W R Q W +Y
Sbjct: 244 AAGKTCDFVVYPEAGHAFHADYRP---SYRAEPAQD---------GWKRLQDWFRQY 288
>sp|P95862|DLHH_SULSO Putative carboxymethylenebutenolidase OS=Sulfolobus solfataricus
(strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
GN=SSO2087 PE=3 SV=1
Length = 257
Score = 73.2 bits (178), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 110/272 (40%), Gaps = 62/272 (22%)
Query: 45 KKIQIQRDDTTFDAYVVGKEDAP-GIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103
K+I D A++ E+ ++V+ E WG++ IK+ + +++ N G+ AL P L
Sbjct: 3 KEIFYDSDGAKIRAFLATPENPKLAVIVIHEIWGLNDNIKDISRRLA--NEGYMALAPQL 60
Query: 104 YRGKVGL----------------------DTAEAQHLMSGLDWPGA-------------- 127
Y + D Q +MS LD G
Sbjct: 61 YTRNEDVLNEGNIQNVMMKVWSIPPEKRNDPNSYQQIMSALDEKGKKVAELLVLNRQKTE 120
Query: 128 ---VKDIHASVNWLKANGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELAD 184
+KD + ++ + G KK+ G+CMGG LA + VP +D + FYG P L
Sbjct: 121 EQMIKDAIKAYEYVSSQGVKKIVSMGFCMGGGLAFQLATEVP-LDGTIVFYGRNPQPLEA 179
Query: 185 PTQAKAPVQAHFGELDNFV--GFSDVKTAKALEEKLKASGVPYEVHIYPGSAHAFMNISP 242
+ K P+ + D + G D+ +A +K E+ IYPG+ HAF N
Sbjct: 180 IQKIKGPILGLYAGEDPPIDAGLPDLISAIIKYKK------DLELKIYPGAYHAFFN--D 231
Query: 243 DGVKRRKEMGMDDHDPAAVELAWSRFQSWMTR 274
G KE A E AW R +S++ R
Sbjct: 232 RGRSYNKE---------AAEDAWERVKSFLRR 254
>sp|F8QQ74|NAAC_BRASZ Lactonase NaaC OS=Bradyrhizobium sp. GN=naaC PE=3 SV=1
Length = 248
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 107/227 (47%), Gaps = 33/227 (14%)
Query: 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHL---MSGLD 123
P ++V+ G++ IK+ A+ +++ GF AL+ D++ + D + A+ + + LD
Sbjct: 34 PAVIVMPAIHGINTYIKDVAIDLAK--AGFVALLIDIHSPEQEPDLSNAEKIQIAVETLD 91
Query: 124 WPGAVKDIHASVNWLKANGS---KKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGV--- 177
+KD+ A+V +L+ + + ++G+ G+C+GG A+ ++ P + V FYG+
Sbjct: 92 DRKVLKDVDAAVRYLEQHAAVRADRLGILGFCVGGTYALLAA-RTPAIRVSVGFYGLLEY 150
Query: 178 -------PPPELADPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIY 230
P L Q AP+ H G+ D ++ D K ++++ YE+ IY
Sbjct: 151 QSRTDNKPVSPLDSVAQFTAPILFHVGDKDPWI---DSKMLAEFTKRMQQHQKSYELCIY 207
Query: 231 PGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYLS 277
G+ HAF E D + P A + AW+ ++ +L
Sbjct: 208 RGAGHAF-----------HEHFRDAYRPIAAQSAWNNTLIYLRWHLC 243
>sp|Q6P7K0|CMBL_XENTR Carboxymethylenebutenolidase homolog OS=Xenopus tropicalis GN=cmbl
PE=2 SV=1
Length = 246
Score = 68.6 bits (166), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 84/189 (44%), Gaps = 18/189 (9%)
Query: 95 GFKALIPDLYRG----KVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGS-KKVGVT 149
G+ + PD + G K D + + K+I+ + +LK KK+GV
Sbjct: 70 GYITICPDFFVGQEPWKPSNDRSTFTEWLQTRQATKVEKEINVVLKYLKEQCHVKKIGVI 129
Query: 150 GYCMGGALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVK 209
G+C GG + + PE+ A VSFYG+ ++ D P F E+D+ + V
Sbjct: 130 GFCWGGVVTHHLMLKYPELKAGVSFYGI-IRDVEDRYNLLNPTLFIFAEMDHVIPLEQV- 187
Query: 210 TAKALEEKLKA-SGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRF 268
LEEKLK S V ++V ++P H F++ RK ++ D +E A
Sbjct: 188 --SLLEEKLKVHSKVDFQVKVFPKQTHGFVH--------RKNEDINPEDKPFIEEARKNM 237
Query: 269 QSWMTRYLS 277
W+ +Y++
Sbjct: 238 LEWLHKYIN 246
>sp|Q8X8L4|DLHH_ECO57 Putative carboxymethylenebutenolidase OS=Escherichia coli O157:H7
GN=ysgA PE=3 SV=1
Length = 271
Score = 67.8 bits (164), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 103/226 (45%), Gaps = 34/226 (15%)
Query: 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY-RGKVGLDTAEAQHLMSGL--D 123
P ++VVQE +GV I++ +++ G+ A+ P+LY R D A+ L+SGL
Sbjct: 57 PVVIVVQEIFGVHEHIRDICRRLAL--EGYLAIAPELYFREGDPNDFADIPTLLSGLVAK 114
Query: 124 WPGA--VKDIHASVNWLKANGS--KKVGVTGYCMGGALAIASSVLVPEVDAVVSFYG--- 176
P + + D+ +W NG ++ +TG+C GG + + P++ A V++YG
Sbjct: 115 VPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLT 174
Query: 177 ------VPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIY 230
P + T APV +G LDN + V+T + + L+A+ E+ +Y
Sbjct: 175 GDKSLNSPKQPVDIATDLNAPVLGLYGGLDNSIPQESVET---MRQALRAANAKAEIIVY 231
Query: 231 PGSAHAF-MNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRY 275
P + HAF + P + A+ E W R W +Y
Sbjct: 232 PDAGHAFNADYRP------------SYHAASAEDGWQRMLEWFKQY 265
>sp|P0A115|CLCD_PSESB Carboxymethylenebutenolidase OS=Pseudomonas sp. (strain B13)
GN=clcD PE=1 SV=1
Length = 236
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 47 IQIQR-DDTTFDAYV--VGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103
I IQ D TF A V K AP IV+ QE +GV+ ++ + ++ G+ A+ PDL
Sbjct: 6 ISIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWL--VDQGYAAVCPDL 63
Query: 104 YRGK---VGLD------TAEAQHLMSGLDWPGAVKDIHASVNWLK----ANGSKKVGVTG 150
Y + LD +A L D V D+ A++ + + +NG KVG+ G
Sbjct: 64 YARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNG--KVGLVG 121
Query: 151 YCMGGALAIASSVLVPEVDAVVSFYGVP-PPELADPTQAKAPVQAHFGELDNFVGFSDVK 209
YC+GGALA + VD V +YGV +L + K P H G D+FV
Sbjct: 122 YCLGGALAFLVAA-KGYVDRAVGYYGVGLEKQLKKVPEVKHPALFHMGGQDHFV---PAP 177
Query: 210 TAKALEEKLKASGVPYEVHIYPGSAHAFMNISPDG 244
+ + + E A+ + +VH Y + H+F S G
Sbjct: 178 SRQLITEGFGANPL-LQVHWYEEAGHSFARTSSSG 211
>sp|P0A114|CLCD_PSEPU Carboxymethylenebutenolidase OS=Pseudomonas putida GN=clcD PE=1
SV=1
Length = 236
Score = 66.6 bits (161), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/215 (31%), Positives = 100/215 (46%), Gaps = 26/215 (12%)
Query: 47 IQIQR-DDTTFDAYV--VGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDL 103
I IQ D TF A V K AP IV+ QE +GV+ ++ + ++ G+ A+ PDL
Sbjct: 6 ISIQSYDGHTFGALVGSPAKAPAPVIVIAQEIFGVNAFMRETVSWL--VDQGYAAVCPDL 63
Query: 104 YRGK---VGLD------TAEAQHLMSGLDWPGAVKDIHASVNWLK----ANGSKKVGVTG 150
Y + LD +A L D V D+ A++ + + +NG KVG+ G
Sbjct: 64 YARQAPGTALDPQDERQREQAYKLWQAFDMEAGVGDLEAAIRYARHQPYSNG--KVGLVG 121
Query: 151 YCMGGALAIASSVLVPEVDAVVSFYGVP-PPELADPTQAKAPVQAHFGELDNFVGFSDVK 209
YC+GGALA + VD V +YGV +L + K P H G D+FV
Sbjct: 122 YCLGGALAFLVAA-KGYVDRAVGYYGVGLEKQLKKVPEVKHPALFHMGGQDHFV---PAP 177
Query: 210 TAKALEEKLKASGVPYEVHIYPGSAHAFMNISPDG 244
+ + + E A+ + +VH Y + H+F S G
Sbjct: 178 SRQLITEGFGANPL-LQVHWYEEAGHSFARTSSSG 211
>sp|P56262|DLHH_ECOLI Putative carboxymethylenebutenolidase OS=Escherichia coli (strain
K12) GN=ysgA PE=3 SV=3
Length = 271
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 34/226 (15%)
Query: 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY-RGKVGLDTAEAQHLMSGL--D 123
P ++VVQE +GV I++ +++ G+ A+ P+LY R D A+ L+SGL
Sbjct: 57 PVVIVVQEIFGVHEHIRDICRRLAL--EGYLAIAPELYFREGDPNDFADIPTLLSGLVAK 114
Query: 124 WPGA--VKDIHASVNWLKANGS--KKVGVTGYCMGGALAIASSVLVPEVDAVVSFYG--- 176
P + + D+ +W NG ++ +TG+C GG + + P++ A V++YG
Sbjct: 115 VPDSQVLADLDHVASWASRNGGDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLT 174
Query: 177 ------VPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIY 230
P + T AP+ +G DN + V+T + + L+A+ E+ +Y
Sbjct: 175 GDKSLNSPKQPVDIATDLNAPILGLYGGQDNSIPQESVET---MRQALRAANAKAEIIVY 231
Query: 231 PGSAHAF-MNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRY 275
P + HAF + P + A+ E W R W +Y
Sbjct: 232 PDAGHAFNADYRP------------SYHAASAEDGWQRMLEWFKQY 265
>sp|Q5XH09|CMBL_XENLA Carboxymethylenebutenolidase homolog OS=Xenopus laevis GN=cmbl PE=2
SV=1
Length = 246
Score = 65.1 bits (157), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 18/189 (9%)
Query: 95 GFKALIPDLYRG----KVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKANGS-KKVGVT 149
G+ + PD + G K D + + K+++ + +LK KK+GV
Sbjct: 70 GYITICPDFFVGQESWKPSNDWSTFTEWLQTRQATKVEKEMNVVLKYLKEQCHVKKIGVI 129
Query: 150 GYCMGGALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVK 209
G+C GG + + PE+ A VSFYG+ ++ D P F E+D+ + V
Sbjct: 130 GFCWGGVVTHHLMLKYPELKAGVSFYGI-IRDVEDRYNLLNPTLFIFAEIDHVIPLEQV- 187
Query: 210 TAKALEEKLKA-SGVPYEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRF 268
LE+KLK S V +++ ++P H F++ RK+ ++ D +E A
Sbjct: 188 --SLLEQKLKVHSKVDFQIKVFPKQTHGFVH--------RKKEDINPEDKPFIEEARKDM 237
Query: 269 QSWMTRYLS 277
W+ +Y++
Sbjct: 238 LEWLQKYIN 246
>sp|Q9L6M9|DLHH_SALTY Putative carboxymethylenebutenolidase OS=Salmonella typhimurium
(strain LT2 / SGSC1412 / ATCC 700720) GN=ysgA PE=3 SV=1
Length = 270
Score = 62.4 bits (150), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 101/225 (44%), Gaps = 32/225 (14%)
Query: 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY-RGKVGLDTAEAQHLMSGL--D 123
P ++VVQE +GV I++ +++ G+ A+ P+LY R D A+ L+SGL
Sbjct: 57 PVVIVVQEIFGVHEHIRDICRRLAL--EGYLAIAPELYFREGDPNDFADIPTLLSGLVAK 114
Query: 124 WPGA--VKDIHASVNWLKANG--SKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYG--V 177
P + + D+ +W NG + ++ +TG+C GG + + P++ A V++YG V
Sbjct: 115 VPDSQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLV 174
Query: 178 PPPELADP-------TQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIY 230
L P T APV +G D + V+T + + L+A+ E+ +Y
Sbjct: 175 GDTSLNSPKHPVDIATDLNAPVLGLYGGQDTSIPQESVET---MRQALRAANAKAEIVVY 231
Query: 231 PGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRY 275
P + HAF G A+ + W R W +Y
Sbjct: 232 PDAGHAFNADYRPGYHE-----------ASAKDGWQRMLEWFAQY 265
>sp|Q8Z3B8|DLHH_SALTI Putative carboxymethylenebutenolidase OS=Salmonella typhi GN=ysgA
PE=3 SV=1
Length = 270
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 100/225 (44%), Gaps = 32/225 (14%)
Query: 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY-RGKVGLDTAEAQHLMSGL--D 123
P ++VVQE +GV I++ +++ G+ A+ P+LY R D A+ L+SGL
Sbjct: 57 PVVIVVQEIFGVHEHIRDICRRLAL--EGYLAIAPELYFREGDPNDFADIPTLLSGLVAK 114
Query: 124 WPGA--VKDIHASVNWLKANG--SKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYG--V 177
P + + D+ +W NG + ++ +TG+C GG + + P++ A V++YG V
Sbjct: 115 VPDSQVLADLDHVASWASRNGGDAHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLV 174
Query: 178 PPPELADP-------TQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIY 230
L P T APV + D + V+T + + L+A+ E+ +Y
Sbjct: 175 GDTSLNSPKHPVDIATDLNAPVLGLYSGQDTSIPQESVET---MRQALRAANAKAEIVVY 231
Query: 231 PGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRY 275
P + HAF G A+ + W R W +Y
Sbjct: 232 PDAGHAFNADYRPGYHE-----------ASAKDGWQRMLEWFAQY 265
>sp|Q8ZAL4|DLHH_YERPE Putative carboxymethylenebutenolidase OS=Yersinia pestis GN=YPO3787
PE=3 SV=1
Length = 267
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 40/229 (17%)
Query: 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY-RGKVGLDTAEAQHLMSGL--D 123
P ++VVQE +GV I++ ++++ G+ A+ P+LY R D + L++ L
Sbjct: 47 PVVIVVQEIFGVHEHIQDICRRLAK--QGYLAIAPELYFRQGDAKDYSNINELVNNLVKK 104
Query: 124 WPG--AVKDIHASVNWLKANG--SKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYG--- 176
P + D+ + +W +G +KK+ +TG+C GG +A + P++ A V++YG
Sbjct: 105 VPDRQVLVDLDHTAHWASRHGGDTKKLAITGFCWGGRIAWLYAAHNPQLKAAVAWYGKLV 164
Query: 177 ------VPPPELADPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIY 230
+P + APV +G D + ++T + + L+A+ E+ +Y
Sbjct: 165 GEKTLFLPKYPVDVAIDLCAPVLGLYGGKDTSIPAEHIET---MRQALRAANADAEIIVY 221
Query: 231 PGSAHAFMNISPDGVKRRKEMGMDDHDPA----AVELAWSRFQSWMTRY 275
P + HAF D+ P+ + + W R W T++
Sbjct: 222 PEAGHAFNA---------------DYRPSYHAESAQDGWQRMLDWFTQH 255
>sp|Q8R1G2|CMBL_MOUSE Carboxymethylenebutenolidase homolog OS=Mus musculus GN=Cmbl PE=2
SV=1
Length = 245
Score = 56.2 bits (134), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 89/214 (41%), Gaps = 19/214 (8%)
Query: 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHL----MSGLDW 124
++VVQ+ +G + + N G+ ++PD + G+ D A + +
Sbjct: 45 VIVVQDIFGWQLPNTRYMADMIARN-GYTTIVPDFFVGQEPWDPAGDWSTFPAWLKSRNA 103
Query: 125 PGAVKDIHASVNWLKANG-SKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELA 183
+++ A + +L+ ++K+G+ G+C GG + P++ A VS YG+ +
Sbjct: 104 RKVNREVDAVLRYLRQQCHAQKIGIVGFCWGGVVVHQVMTAYPDIRAGVSVYGI-IRDSE 162
Query: 184 DPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASG-VPYEVHIYPGSAHAFMNISP 242
D K P F E D + V T L +KLK V Y+V + G H F++
Sbjct: 163 DVYNLKNPTLFIFAENDTVIPLEQVST---LTQKLKEHCIVNYQVKTFSGQTHGFVH--- 216
Query: 243 DGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYL 276
RK D +E A W+ +Y+
Sbjct: 217 -----RKREDCSPADKPYIEEARRNLIEWLNKYV 245
>sp|Q43914|DLHH_AZOBR Putative carboxymethylenebutenolidase OS=Azospirillum brasilense
PE=3 SV=1
Length = 231
Score = 55.5 bits (132), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 70/244 (28%), Positives = 106/244 (43%), Gaps = 42/244 (17%)
Query: 52 DDTTFDAYVV---GKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY-RGK 107
DD +F AYV G APG+VV+QE +GV+ +++ + G+ A+ PDL+ R +
Sbjct: 10 DDGSFSAYVAKPAGGGPAPGLVVIQEIFGVNQVMRDLCDAFAA--QGWLAVCPDLFWRQE 67
Query: 108 VGLDTAEAQH--------LMSGLD----WPGAVKDIHASVNWLKANGSKKVGVTGYCMGG 155
G+ + LM+G+D W + ++ +K+VG +G
Sbjct: 68 PGVQITDKTQEEWNRAFALMNGMDQDKRWTTSRPPCRGCAR-IRIAPAKRVGR--LLLGR 124
Query: 156 ALAIASSVLVPEVDAVVSFYGVPPPEL-ADPTQAKAPVQAHFGELDNFVGFSDVKTAKAL 214
LA + + DA VS+YGV L + P+ H E D FV A+A
Sbjct: 125 RLAFMMAAR-SDSDANVSYYGVGLDGLVGEAASITKPLLMHIAEKDQFV------PAEAR 177
Query: 215 EEKLKA-SGVP-YEVHIYPGSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWM 272
E+ L A G P H+YPG HAF G +P A ELA R ++
Sbjct: 178 EKVLAAVKGNPNVTAHVYPGVDHAF-----------ARAGGAHFEPEAAELANGRTAAFF 226
Query: 273 TRYL 276
++L
Sbjct: 227 KQHL 230
>sp|Q7TP52|CMBL_RAT Carboxymethylenebutenolidase homolog OS=Rattus norvegicus GN=Cmbl
PE=2 SV=1
Length = 245
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTA----EAQHLMSGLDW 124
++VVQ+ +G + + N G+ ++PD + G+ D A + +
Sbjct: 45 VIVVQDIFGWQLSNTRYMADMIAGN-GYTTIVPDFFVGQEPWDPAGDWSTFPEWLKSRNA 103
Query: 125 PGAVKDIHASVNWLKANG-SKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELA 183
+++ A + +LK ++K+G+ G+C GG + PEV A VS YG+ +
Sbjct: 104 RKINREVDAVLRYLKQQCHAQKIGIVGFCWGGIVVHHVMTTYPEVRAGVSVYGI-IRDSE 162
Query: 184 DPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASG-VPYEVHIYPGSAHAFMNISP 242
D K P F E D + V L +KLK V Y+V + G H F++
Sbjct: 163 DVYNLKNPTLFIFAENDAVIPLEQVSI---LIQKLKEHCIVNYQVKTFSGQTHGFVH--- 216
Query: 243 DGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYL 276
RK D +E A W+ +Y+
Sbjct: 217 -----RKREDCSPADKPYIEEARRNLIEWLNKYI 245
>sp|P27136|TFDE1_CUPPJ Carboxymethylenebutenolidase 1 OS=Cupriavidus pinatubonensis
(strain JMP134 / LMG 1197) GN=tfdEI PE=3 SV=1
Length = 234
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 32/207 (15%)
Query: 50 QRDDTTFDAYVVGK---EDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLY-- 104
R F AY+ GK + AP +V+ QE +G+ I+ + + GF + PDLY
Sbjct: 10 SRSGGRFGAYL-GKPTTDSAPIVVIAQEIFGITPFIRETVEWL--VGAGFGCVCPDLYWR 66
Query: 105 -------RGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLKA----NGSKKVGVTGYCM 153
V + +A L D V D+ ++ + +A NG +V V GYC+
Sbjct: 67 QAPNIELDANVPSEREQALALFRDFDMEAGVNDLSCAIEYARALPFSNG--RVAVVGYCL 124
Query: 154 GGALA--IASSVLVPEVDAVVSFYGVPPPELADPTQA-KAPVQAHFGELDNFVGFSDVKT 210
GGALA +A+ L D + +YGV + A P H G D++V +
Sbjct: 125 GGALAFDVAARSL---ADCSIGYYGVGLEKKVSLVPAITRPAMFHMGTKDHYV----TEE 177
Query: 211 AKALEEKLKASGVPYEVHIYPGSAHAF 237
A+++ E+ +H YP H+F
Sbjct: 178 ARSILEEHFGRNKNLSLHWYP-VGHSF 203
>sp|P73163|DLHH_SYNY3 Putative carboxymethylenebutenolidase OS=Synechocystis sp. (strain
PCC 6803 / Kazusa) GN=sll1298 PE=3 SV=1
Length = 246
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 67 PGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR--------GKVGLDTAEAQHL 118
P ++V+QE +GV+ I++ ++++ G+ A+ P +Y+ G + L
Sbjct: 33 PVVIVIQEIFGVNSHIRDVTERVAK--EGYVAIAPAIYQRQAPGFEEGYTPEGIEAGRKL 90
Query: 119 MSGLDWPGAVKDIHASVNW---LKANGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFY 175
+ D+ A++ + L ++VG+ G+C GG + + L P V A SFY
Sbjct: 91 KDQTSSAEILSDLEATIAYAQTLPNVKPEEVGLIGFCFGGWIVYLGASL-PTVKATASFY 149
Query: 176 GVPPPELADPTQAKAPVQAH---FGELDNFVGFSDVKTAKALEEKLKASGVPYEVH---- 228
G P A P A+ P+ G L F G D A E+++ + Y+V+
Sbjct: 150 GAGIPHWA-PGTAEPPITYTDKIQGTLYAFFGLEDTSIPMADTEQIEQALTKYQVNHKIF 208
Query: 229 IYPGSAHAFM 238
YPG+ H F
Sbjct: 209 RYPGADHGFF 218
>sp|Q96DG6|CMBL_HUMAN Carboxymethylenebutenolidase homolog OS=Homo sapiens GN=CMBL PE=1
SV=1
Length = 245
Score = 49.7 bits (117), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHL----MSGLDW 124
++V+Q+ +G + + N G+ ++PD + G+ D + + + +
Sbjct: 45 VIVIQDIFGWQLPNTRYIADMISGN-GYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNA 103
Query: 125 PGAVKDIHASVNWLKANG-SKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELA 183
++I A + +LK ++K+G+ G+C GG + E A VS YG+ +
Sbjct: 104 QKIDREISAILKYLKQQCHAQKIGIVGFCWGGTAVHHLMMKYSEFRAGVSVYGI-VKDSE 162
Query: 184 DPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKA-SGVPYEVHIYPGSAHAFMNISP 242
D K P F E D + DV L +KLK V Y++ + G H F++
Sbjct: 163 DIYNLKNPTLFIFAENDVVIPLKDVSL---LTQKLKEHCKVEYQIKTFSGQTHGFVH--- 216
Query: 243 DGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYL 276
RK D ++ A W+ +Y+
Sbjct: 217 -----RKREDCSPADKPYIDEARRNLIEWLNKYM 245
>sp|Q5RBU3|CMBL_PONAB Carboxymethylenebutenolidase homolog OS=Pongo abelii GN=CMBL PE=2
SV=1
Length = 245
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/214 (22%), Positives = 88/214 (41%), Gaps = 19/214 (8%)
Query: 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHL----MSGLDW 124
++V+Q+ +G + + N G+ ++PD + G+ D + + + +
Sbjct: 45 VIVIQDIFGWQLPNTRYMADMISGN-GYTTIVPDFFVGQEPWDPSGDWSIFPEWLKTRNA 103
Query: 125 PGAVKDIHASVNWLKANG-SKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVPPPELA 183
++I A + +LK ++K+G+ G+C GG + E A VS YG+ +
Sbjct: 104 QKIDREISAILKYLKQQCHAQKIGIVGFCWGGIAVHHLMMKYSEFRAGVSVYGI-VKDSE 162
Query: 184 DPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKA-SGVPYEVHIYPGSAHAFMNISP 242
D K P F E D + DV L +KLK V Y++ + G H F++
Sbjct: 163 DIYNLKNPTLFIFAENDVVIPLKDVSL---LTQKLKEHCKVEYQIKTFSGQTHGFVH--- 216
Query: 243 DGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYL 276
RK D ++ A W+ +Y+
Sbjct: 217 -----RKREDCSPADKPYIDEARRNLIEWLNKYM 245
>sp|O67988|CLCD_RHOOP Carboxymethylenebutenolidase OS=Rhodococcus opacus GN=clcD PE=3
SV=1
Length = 252
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 54/226 (23%), Positives = 97/226 (42%), Gaps = 38/226 (16%)
Query: 69 IVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYR-----GKVGLDTAEAQHLMSGLD 123
IV++ + +GV ++ A +++ G +IPD++ G D A A+ LD
Sbjct: 43 IVLLTDIFGVTPFYRHLAAMLAE--KGHDVVIPDVFHRVGHATDPGRDAALARRRQ--LD 98
Query: 124 WPGAVKDIHASVNWLKANGSKKVGVTGYCMGGALAIASSVLVPEVDAVVSFYGV------ 177
A++DI +V + + GV G+C+GG+ A+ ++ P ++Y
Sbjct: 99 DRLAIEDIERTVAH-TVDDQQTFGVLGFCLGGSFALLTAAAHPN-QVTATYYAFPKGAPG 156
Query: 178 ------PPPELADPTQAKAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIYP 231
PP E AD PV H+G D+++ ++ LE+ L ++ P E+ Y
Sbjct: 157 AKVPVKPPLEAAD--AIDGPVLCHWGR-DDYIDHEEIDQ---LEQILASAPGPSEIRWYD 210
Query: 232 GSAHAFMNISPDGVKRRKEMGMDDHDPAAVELAWSRFQSWMTRYLS 277
+ H+F+ G+ AA +W R + RYL+
Sbjct: 211 NAGHSFLA----GLTEPNHPST-----AAAHDSWQRTVEFFERYLT 247
>sp|P27100|TCBE_PSESQ Carboxymethylenebutenolidase OS=Pseudomonas sp. (strain P51)
GN=tcbE PE=3 SV=1
Length = 238
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 65/153 (42%), Gaps = 21/153 (13%)
Query: 66 APGIVVVQEWWGVD-FEIKNHAVKISQLNPGFKALIPDLY-RGKVGLD--------TAEA 115
P ++V QE +GV+ F + A S+ GF L PDLY R G++ A A
Sbjct: 28 GPVVMVAQEIFGVNPFMTEVLAWLASE---GFVGLCPDLYWRHGPGIEFDPNDEVQRARA 84
Query: 116 QHLMSGLDWPGAVKDIHASVNWLKAN--GSKKVGVTGYCMGGALA--IASSVLVPEVDAV 171
+ V D+ A+V + + V V GYC+GGALA +A+
Sbjct: 85 LGMFRDYKLEDGVADLRATVAYAASQPFCDGGVAVIGYCLGGALAYEVAAEGF---AQCC 141
Query: 172 VSFYGVP-PPELADPTQAKAPVQAHFGELDNFV 203
V +YGV L K P H G D+FV
Sbjct: 142 VGYYGVGFEKRLERARLVKTPSMFHMGTNDHFV 174
>sp|Q54MZ9|CMBL_DICDI Carboxymethylenebutenolidase homolog OS=Dictyostelium discoideum
GN=cmbl PE=3 SV=1
Length = 255
Score = 42.4 bits (98), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 95/214 (44%), Gaps = 34/214 (15%)
Query: 57 DAYVVGKEDAPG----IVVVQEWWGVDFEIKNHAVKISQ-----LNPGF-----KALIPD 102
DAYV +D+ ++ V + +G+ + A KI++ + P F K +I +
Sbjct: 17 DAYVSRPKDSQKELKPVIFVMDAFGLRDWLYEMADKIAEEGYFVVQPNFYYRIGKNIITN 76
Query: 103 LYRGKVGLDT-----AEAQHLMSGLDWPGAVKDIHASVNWL-KANGSKK----VGVTGYC 152
L + K DT + + M+ ++ V D+ +++ K G +K V + GYC
Sbjct: 77 LEKLKSA-DTKDEVICQIRTQMAKINREETVSDVSEMFDFIDKQEGVRKSKEGVAIVGYC 135
Query: 153 MGGALAIASSVLVPEVDAVV-SFY----GVPPPELADPTQAKA-PVQAHFGELDNFVGFS 206
GG +A+ S++ P++ VV SF+ +P E + K + +FG DN
Sbjct: 136 FGGGVAMRSAIAFPDIVKVVASFHAGRLAIPDDENSIHKHLKGVKAECYFGHADNDQSMP 195
Query: 207 DVKTAKALEEKLKASGVPYEVHIY--PGSAHAFM 238
+ E+ L +G+ Y IY P AH ++
Sbjct: 196 -LDQIHLFEKSLTEAGIKYTSEIYNNPSCAHGWV 228
>sp|Q6BSS8|APTH1_DEBHA Acyl-protein thioesterase 1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=DEHA2D06534g PE=3 SV=2
Length = 232
Score = 40.0 bits (92), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 46/98 (46%), Gaps = 8/98 (8%)
Query: 145 KVGVTGYCMGGALAIASSVLVP-EVDAVVSFYGVPP-----PELADPTQAKAPVQAHFGE 198
K+ + G+ G A+++A+ L+ +V VV+ G P P++ + + P+ G
Sbjct: 118 KIIIGGFSQGAAVSLATVALLDFKVGGVVALSGFSPIKESLPQIMNKANLETPIFQGHGT 177
Query: 199 LDNFVGFSDVKTAKALEEKLKASGVPYEVHIYPGSAHA 236
D V F K L +KL V + H YPG AH+
Sbjct: 178 ADPIVNFDFGKQTSELYQKLGFKNVKF--HTYPGVAHS 213
>sp|Q09571|YRD1_CAEEL Uncharacterized protein K02A2.1 OS=Caenorhabditis elegans
GN=K02A2.1 PE=4 SV=2
Length = 158
Score = 39.7 bits (91), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 17/136 (12%)
Query: 123 DWPGAVK-DIHASVNWLKAN---GSKKVGVTGYCMGGALAI-ASSVLVPEVDAVVSFYGV 177
D G +K + A++N LK+ +K+G G+C+GG ++ + + AV+SF+G
Sbjct: 4 DRNGKLKPRLEAALNALKSVPCVDKQKLGAFGFCIGGLCSLDCARYRFDGIRAVISFHGT 63
Query: 178 PPPELADPTQA--KAPVQAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIYPGSA- 234
P P + +Q H G+ D V S V T A E+++A + V I G A
Sbjct: 64 LTPIEGIPLELLDDNSIQVHHGDADKHV--SKV-TVDAFHEEMRARNSDF-VFISHGKAM 119
Query: 235 HAFMN-----ISPDGV 245
H+F + I+P GV
Sbjct: 120 HSFTDPESAGIAPSGV 135
>sp|P39721|AIM2_YEAST Protein AIM2 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=AIM2 PE=1 SV=1
Length = 246
Score = 35.4 bits (80), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 52/127 (40%), Gaps = 26/127 (20%)
Query: 144 KKVGVTGYCMG-----------GALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPV 192
K +GV GYC G G LA A+++ P SF + E D +K P+
Sbjct: 122 KFIGVVGYCFGAKFAVQHISGDGGLANAAAIAHP------SFVSIEEIEAID---SKKPI 172
Query: 193 QAHFGELDNFVGFSDVKTAKALEEKLKASGVPYEVHIYPGSAHAFM---NISPDGVKRRK 249
E D+ EEKLK + Y++ ++ G AH F +IS VK K
Sbjct: 173 LISAAEEDHIF---PANLRHLTEEKLKDNHATYQLDLFSGVAHGFAARGDISIPAVKYAK 229
Query: 250 EMGMDDH 256
E + D
Sbjct: 230 EKVLLDQ 236
>sp|Q07008|NOTC1_RAT Neurogenic locus notch homolog protein 1 OS=Rattus norvegicus
GN=Notch1 PE=2 SV=2
Length = 2531
Score = 33.1 bits (74), Expect = 2.4, Method: Composition-based stats.
Identities = 32/130 (24%), Positives = 58/130 (44%), Gaps = 24/130 (18%)
Query: 60 VVGKEDAPGIVVVQEWWGVDFEIKNHAVKISQLNPGFKALIPDLYRGKVGLDTAEAQHLM 119
VV K DA G ++ ++G + E++ H +K S + +L+P G + + +
Sbjct: 1604 VVFKRDAQGQQMIFPYYGREEELRKHPIKRSAVGWATTSLLP-------GTNGGRQRREL 1656
Query: 120 SGLDWPGAVKDIHASVNWLKANGSKKVGVTGYCMG---------GALAIASSVLVP-EVD 169
+ DIH S+ +L+ + + V + C GALA S+ +P +++
Sbjct: 1657 DPM-------DIHGSIVYLEIDNRQCVQSSSQCFQSATDVAAFLGALASLGSLNIPYKIE 1709
Query: 170 AVVSFYGVPP 179
AV S PP
Sbjct: 1710 AVKSETVEPP 1719
>sp|P70948|YITV_BACSU Putative esterase YitV OS=Bacillus subtilis (strain 168) GN=yitV
PE=4 SV=2
Length = 255
Score = 32.3 bits (72), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 50/106 (47%), Gaps = 13/106 (12%)
Query: 83 KNHAVKISQL--NPGFKALIPD-LYRGKVGLDTAEAQHLMSGLDWPGAVKDIHASVNWLK 139
K H + I+ L GF+A++P+ L+ G+ G + A + ++G W + +I + LK
Sbjct: 40 KEHNLHIAYLLAEKGFRAVLPEALHHGERGEEMAVEE--LAGHFWDIVLNEI-EEIGVLK 96
Query: 140 ANGSK-------KVGVTGYCMGGALAIASSVLVPEVDAVVSFYGVP 178
+ K ++G+ G MGG + + + A VS G P
Sbjct: 97 NHFEKEGLIDGGRIGLAGTSMGGITTLGALTAYDWIKAGVSLMGSP 142
>sp|P19205|ACPH_PIG Acylamino-acid-releasing enzyme OS=Sus scrofa GN=APEH PE=1 SV=2
Length = 732
Score = 32.0 bits (71), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 37/90 (41%), Gaps = 5/90 (5%)
Query: 151 YCMGGALAIASSVLVPEVDAVVSFYGVPPPELADPTQAKAPVQAHFGELDNFVGFSDVKT 210
+CM A SS +P++ + P + A Q K P+ G+ D V F K
Sbjct: 628 WCMVEAGFSYSSDCLPDLSVWAAMLDKSPIKYA--PQVKTPLLLMLGQEDRRVPF---KQ 682
Query: 211 AKALEEKLKASGVPYEVHIYPGSAHAFMNI 240
LKA VP + +YP S HA +
Sbjct: 683 GMEYYRVLKARNVPVRLLLYPKSTHALSEV 712
>sp|Q9FZL3|MGDG_TOBAC Probable monogalactosyldiacylglycerol synthase, chloroplastic
OS=Nicotiana tabacum GN=MGD A PE=2 SV=1
Length = 535
Score = 31.6 bits (70), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 218 LKASGVPYEVHIYPGSAH-AFMNISPDGVKRRKEMGMDDHDPA 259
L+A PY++ +Y +F+ P V+ RKE+GM++H PA
Sbjct: 310 LRAGLKPYQLKVYGLPVRPSFVKPVPPKVELRKELGMEEHLPA 352
>sp|P50045|URE1_HELMU Urease subunit beta (Fragment) OS=Helicobacter mustelae GN=ureB
PE=3 SV=1
Length = 308
Score = 31.2 bits (69), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 202 FVGFSDVKTAKALEEKLKASGVPYEVHIYPGSAHAFMNISPD 243
F G + KALE+++KA + ++VH GS A +N S D
Sbjct: 195 FFGKGNTSNVKALEDQIKAGALGFKVHEDCGSTPAVINHSLD 236
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.133 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 110,022,807
Number of Sequences: 539616
Number of extensions: 4680218
Number of successful extensions: 12802
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 12763
Number of HSP's gapped (non-prelim): 36
length of query: 278
length of database: 191,569,459
effective HSP length: 116
effective length of query: 162
effective length of database: 128,974,003
effective search space: 20893788486
effective search space used: 20893788486
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)